Lcy04g004280 (gene) Sponge gourd (P93075) v1

Overview
NameLcy04g004280
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionprotein cornichon homolog 1-like isoform X1
LocationChr04: 28549963 .. 28561677 (+)
RNA-Seq ExpressionLcy04g004280
SyntenyLcy04g004280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTAAATAAAGTCAGACTTCTCAAGTCTCAACACACTGAGAGCAAATTGTGATTGAAATAAATTAAACTAAACTTAGAAATGTGGTTGAAATTTGAAGCATCATGGTGGAACTACTCAAAAAGTAAATGCAATATGTAGCTTCAGCCTCCAGAGTTCAAATTCCCAAGAACATTGAACTTGCGAGATCGCCATAGCATTAACAATTGAACTTCGAATTCTGGAATTTCTCAACTGAAGCTGCGCGGTTGCAGAAATGGCGTGGAATCTGATCTTTTGGTTCATCTCTTTCTGTATCAACGTCGCCCTCCTCGTCCTCAACTTTTACCAGGTATGTCCCTTCTAATCTCTCATGAACCCTAGTTTCAGAGATCAACTATTTCTGTAATCGGTTAAGTTACTGACTGTTTTCCGAAAAAGTTTGAATGCGTCGGCTGAAACGTAGCCCGAGAGTTGTTGCTGTTGTTGTTGTGTCTGTCTTGTTCTAATCCTGTGGTCGCTGCTTACTCAATAAGGAGTGGAGGTTTGTTGCGTATCTGAGATTTGTTTGCTGGGAGATAGCATTTTCACCTTAGTTTGATTTATGTCTAGATATGACCTAGAATTTGATTGATGGCACCTTTACACTAGATTAAATATATCCTTACCATTTCACCGTTTTCCGTTTTCTCTTGGTTTCTTAACCTAGCAGTAGAATGGTCGACTTTAAGGTGAGGAATTTGATATTTTGATCAGTCTTGCACTGTTAGCCGAAAGAAATGTATTCACAAAATGACATATCTTCCTATGAAATAACCTTGCCATTTCCAGGGAATGAATTAATCATTTCCTTTTGCATCCCAGTCAACGATGTAATTTTATCTTGCTCTGTAGTCTTCAGAGACGTGGCTGTATATGTGACTTGTGGGGTTGAACGACAGTAAATGTATTGCAACTCTAAAACTGACTTCTATTATTATAGTTTTTTTTTTTTTTTTTGGATAAACTATTATTATAGTTGATATCGCATATCTTATACTTTAATTACTGGTTCTTGAGGCGGATCTGCGGGTTATTTCTGGGACATCAGTTGAGTGTTGGTTGGATGTGCCCCCATTTCGTTTAATATGTTCATGTACAGTGGCAGGAGGAGAGAAGTGATTGCTCTTAATTTCTAATGAACTACGATGATTTCTTCTCTCTTTTTCTTCGTTTATATTTTTATCGACTCGATGAACAGTTATAGTTTCAATCTATAGGCCAATATAACTGGCCGTTGCAAAGAGTAATATTAATTGTCTAAGTACATTTGTGCTTTCAAGTTGGAAGCATCTAATCGTTGGTGTTGATCTTTTTGTAGCTTTTGGTATTGACGGATTTGGAGGCAGATTATCTGAACATCTATGATTCATCTTCCCGCATTAATAAACTTGTCATTCCAGAGTTTTTAGTGCAAGGAGTATTTTGCTCTCTTTTCGTCATCACAGGCCACTGGTTCATGTTCCTTATAACCGTCCCTCTTACCTGCTATCACATAAATTTGTAAGTATTTCTTGACAGTGATACGAAGCCTGATATATTTTTTCTTTTACCATGTATTATAGATGAGGCCTATGTGGCATTTCTTTGTCGATTTTTCCTTTTTATTAACCATCATGGGTTGACCTAGTGGTCAATAAAGGCCATGGAAATGATAAAGGGTTTAGTGGGAATATGTTCAATTCATGGAGATTAGCTACCTAGGATTTAATATCCTATGTACTTCCTTGCAACCAAATGTAGTAGGGTCAGGTAGATGTCCATGAGATTAGTCAAGGTGTGCGAAGCTGGTTCGGATACTCACGAGTCACGAATATAGAAAAAAAGTCCCTTTTACTGTCTAAAGTGTTATGTATGAGCCTTATGATGTCCTTTACTTGCAAAATGTAACAAGCTTGCACTCACACCCCTTTAAAGATTGTAGTCTAAGTGTCTAACAACTAAAATTCTTTCTTGTAATCCACCCTTGGTGGCCATTTCATTCATCAATTATTATTATTTATTTTTTGTTGTTGTGTGTGCGCATGCATGTGTGTGAGAGACAAGAAATGGTATTCCATTAAAAATATGAAAAATGGGTCGATTCCCCTTTATTGTGGGGATTGTGGGGTGGGAGAAATAATAGAGTATTTCGGGGTCTTGAGAGGGATCCTTCTGATGTGTGGGACCTCTTCAGATTCTATGTTTCTCTTTGGGCCTTGGTTTCTAAATCTTTTTGTAATTATTCTCTAGGTACTATTATGCCTGATTGGCGCCCCTTTCTTTAGAGGGGATCTCTTTTGAGGGCTGTTTTTTTTTTTTTTTGTTTTTGTATGCCTGTGTTTGTATTCTTTCATCTTTGTAAATCTTTTTGTAATTATTCTCTAGGTACTATTATGCCTGATTGGTGCCCCTTTCTTTAGAGGGGATCTCTTTTGAGGGCTGTTTTATTTTTTTATTTTTTTTTTTTTATTTTTTTTTTTGTATGCCTGTGTTTGTATTCTTTCATTTTTTTCTCAACGAAAGGTAGTATTTTCATTAAAAAAAAATGAAAAATGAGGAAAAGCAGTTGCATAGATTCCAAGCAGATGCAAATTATTTTTGTGGAATACTCTTTATAGTAGGTGTTCTCTCTGTACATATCTCATTTGCTTTGAAGTTATTCATTTAGTTTCAATCTTGTCTTCTGTTTTGAATTAACTTATAAAGTTGAGTTTCTTGTCTCAATTAAGAAAACATTCAACACATTTACTATTATTATTTATGTTTTGTTGTTGTTGCGTGTGCGTGTGTAAGGTATCCTCCTTCCTTAACCTGCAAGAAACACAAGAATACACAGAGCAACACCCAAACCACACTGATAATGGAGAGAAATAGACCCAACTCTGTGATATTGAGTGATTCTTCAATATCCAGAGGGGTTATTAGCCGATAGTATTGATAATGAGAGCCAAGAACAAGAACAAGGATATTCCAGCTTTCGAGAGGCTGGTTCTCTCCCTCTTAGACCACTCTCAGCCTAAGACAAAATGATCCTCCCCCTTTTCACTCTCTCTTTCAGCCTTTTACATCATTCCCTCACTCCCACATTCCCCGTGGTCCCCATGCTGTCCTTTTCTAACCGTTTCCCACTATTCCCTGAAATGCCCTTTCTCTTGTACACTCTTGTGATAGGAGGCCTAACAATACCCCCCGGGTTCAGATTCACCTTGTCCTCAAGGTGGAAGGTAGGGAATTGACATTTGATGTCTGCTGCAGTTTCCCATGTTGCATCGCAAATCTGCTGGTCTTTCCATTGGATCAACCATTCCTCCACATTCTTTTCTTCATTCCAACGAATGCCCAATCGAGCTACTAGTTCAATGACCCATTCGAATTCCTCTGAGAGAGGAGGTATTTCACTGTGAACTTCCAACTGCTGCCCAATAGCCTTTTTAAGCTGAGAGATATGGAAGACATCATGTATCATGGCTGAACTGGGCAGGGCCAATTGGTAGGCGACAGCACCAATCCTTTTGAGTACCTGGTATGGTCCATAAAACCGAGGGGACAGCTTCTCACACCTGCGTTTGGCCACAGATCGCTGCCTGTAGGGTCTGATTTTCAAATATGCCCAATCCCCTTCGAGCAGTTCCACATCTCTTCTTTTCTTGTCTGCTTGCTTCTTCATCCTGTCTTGAGCCAATCTCAACTGCTCTTTCAATCTCAGCAGTTGCCTGTCTCTTTCCAACAACTGTTGGTCCAAGGAATCATTTGTTGTGTCCTGGTGCCCATAAGAAATTAGAGGTGGTGGCTGCCTTCCATAAACCACGTTGAAAGGAGTGGTATTAATAGCGGAGTGAAACGTGGTATTGTACCAGAATTCGGCCCACGACATCCACTGAGCCCATTTCCTTGGTTGCTCATTGCAATAACAACGTAAGAAGGTTTCAAGACAGCGGTTCACTCTTTCTGTTTGGCCGTCGGTTTGAGGATGGAAGGCCGTGCTGCGCTTCAACTGTGTTCCTTGGATTATGAACAACTCAGTCCAAAAGTGGCTAACAAAGATCCTATCTCGATCAGAAACAATGGATCTTGGGAATCCGTGTAACCGAACGATCTCTTTGATGAAAGCTGCTGCCACTATCTTAGCCGAGAAAGGGTGCTTGAGAGTTATAAAGTGAGCATATTTGCTCAATCTGTCCACTACCACTAAGATAGTGTCAACGCCTTGAGAGACCGGTAATCCTTCGATGAAGTCCATAGAAACATCTTCCCAAATCTTGTCTGGACGAGGTAAAGGTTGGAGGAGTCCTGCTGGTGCCACCGAGTCAGATTTATTGGCCTGACAAGTCGAACATTTCTCAACATATTTCTTCACCTCGCTCTTCATTCCCTTCCAATATAGCTCCCCAGTCATCCGTTTATAAGTTCTAAGAAAGCCCGAGTGTCCTCCCATTACTGAGTCATGGAATGTATGTAAAAGTGCAGGGATTAATTCGGACTTACTTGATAGGACTAGCCTTCCTTTGTAGTGCAGCCGCCCGTGGATGAGAGAAAATTTGGGATGACTTAGGGGGTCTTCCTGCAATTCTTGCTGAATCTTCTGCAAGTCTGGGTCCTGATCTACTTCCTTGTAGACTACCTCCAGATCAATCAGCGAGGGAACGGTTAAGGACATCAATTCACTGGTGGGAGGCATTCTAGATAAGGCGTCAGCTGCCTTGTTGAGGAGACCAGGGTGATATCTAATTTCAAAATCGTAGCCTAGGAGCTTGGTCAACCACCTCTGATACTCTGGTTGGATTTCTCGCTGCTCTAACAAGTGCTTAAGGGCCCTTTGATCAGTCAATACCGTAAACTTCTGACTTAATAGATAGTGGCGCCACTTTTGTACTGCTAACACCACTGCCATCAACTCTCGCTCGTATACAGACTTGGCTTGTGATCTTGCACTCAGCGCTTGGCTGAAGAACGCGATCGACCTTCCCTTTTGTGTCAGGACGGCTCCAATCCCGAATCCAGAGGCATCCGTTTCTATGGTGAACGGTATAGTGAAATCCGGAAGTGCCAAGACTGGAAGAGAAATCATGGCTTGCCTCAATGTTTCAAATGCCGCACCAGCTTCATCATTCCAGCTGAAGGCATCCTTCTTGAGTAGCTGAGTAAGGGAGCAGCCAGAGATCCATAATCCTTCACAAAACGGCGGTAATACCCTGTCAGACCCAAGAATCCACGCAACTCTTTGATTGATTTAGGCGTGGGCCATTGTAGCATTGCTCGAATCTTTTCTTGATCCGCTTCCACTCCGTCTGAGGAAACCCAATGCCCAAGATACTCGACTCTGCTTTTCGCAAAAACGCATTTCTTTCGGTTGGCAAACAGAGCATTGTTCCTCAGTGTCTCAAATACAATGGCTAAATGCTTCCTGTGAGTGTCGATGTCCGGGCTATAAATCAAGATGTCGTCGAAGAACACAAGGATGAACCTCCGCAAGAACGGCCTGAACACCTTATTCATCAATGCCTGGAAAGTGGCCGGGGCATTTGTCAACCCAAACGGCATCACAAGGAATTCATAATGGCCTTCATGTGTTCGGAAAGCCGTCTTCTCTACATCCTCACTTTTCATCCTTATTTGATGGTAACCTGATTTCAAGTCTATCTTAGAGTACACAGCAGAGCCATTGAGTTCATCAAGAAGCTCTTCAATAACAGGGATCGGAAACTTATCTGGTATTGTTGCCTGGTTGAGAGCTCTGTAATCGACGCAAAATCGCCATCCTCCATCTTTCTTTTTAACTAGCAGGACAGGACTCGAGAATGGGCTGCAGCTCGGTCTTATAATACCGGATTCCAACATCTCACTGACCATTTTCTCGATCTCATTCTTTTGGACATGGGCATACTTGTAGGGCCGGACATTAACAGGTGTTTGACCATCTTGTAAAACAATGCGATGATCCACATCTCTCTTGGGGGGTAGGCCTGCAGGTAACTCGAAAACTTCTTGGAATTCCCCCAACAATTCTTCGATCGATTTCGGGAGCACAGGTTCTCCCGCGACTTCCTCTAGTTCTTCCTCAATGTTCAGGGCACGTAGCTCAATCAGGAATCCTTGATCGGAATCAGTCCAGGATTTAACCATCATTTTCATAGTAATCTCGGCTTTTGTCAAGGATGGATCTCCACGAATAGTGATCTTGGAGCCATTGACATCAATGGTCATAGTCAGCTCAGACCAGTTAACACTCATATTTCCCATAGCCTTCAGCCACTGCATTCCAAGGATGACATCCACCCCACGCAGTTCCAGCGGAAGAAAATCTTCTTTAATAGACAACTCTGGGAGAGAGATCACAACGCCTTGGCACACACCTTGTCCCTTGACCGCAGACCCAGTACCCATCACGATGCCATAGTCGGAGGTGGTTGTCAAAGGGAAATTGAACTCCTCCACCAACTGTTGGGATATGAAGTTATGCGTGGCCCCGCAATCGATCAGAATAACGATTTCTTTTCCCTCGATCAGCCCCCGAATCTTCATCGTTCCGGGAGTGGAGAATCCAATCACGGATTTCAGAGCGAGTTCCACTTGTTCGAGATCTCTAGCCTCGAGGTTGTGCACCTCTGCGACCTCCTCTTCAGCCTCTGTTTCTTGCACAAGTTCAATCTCCTCTTCTTCGTGAACCAGGAGCACTCGAAGTTCTCTAACTTCCTTGCCTTTGCAACGATGGTTGAACGTAAATTTCTCATCACATTTAAAACATATGCCCTTGTCTCGCTTTTCCTTGTATTCCGCGTCTGTAAGCCTGCGAGTAGGTGCTTCCCTGCGCGGTTGTCCGCCCTTTTCCGGTATGGTTACAGTACGTATCTGCCATGAGTCATTATTAGCCTTAACATGTGATCTCGTCGTACCTGATGAAGAAGATTTCCCTCCACCCTGCTGGGCCGGCCTGCAACTATCGTAGCCCAGAGTTTCCATCGCTAGCTTTAATGGCCAGGTGGTCTTCTATCAGCTGGGCCTGCTTCATGATTTCTCGAAGCCCAACTGGTTGACGACTCACAACTTCAGCTCTTACTGTAGGGTTAAGCCCATTGAGGAAGGTATCTTCCAACACCATCTTCGGCATCTCCGGTAGAGGAGCGGCGTATATTTCAAACCTTTTCCGGTAGTCGGCCACCGTTCCATCTTGCTTAACGGCCAAGAAACGAGCGCAAAGACTTCCTTCTTGAGAAGGGCGAAATCTTTCGAACAGTTTGGCCTTCAACTGATCCCATGATTTAATAGGTTCTTGATTATTTTCCCAACGATACCAGTCGACCACGTCATGATCAAAACTGATAATAGCCGCCGTGATTTTCTCAGCCTCCGTTAGTTGATGAATCTCGAAATAACGCTCCGCACGAAAGAGCCACGAATCCGGATTCTCTCCAGCAAAAACCGGCATCTCGAGCTTCTTAAACTTGCAACGGTCTCCTCCTTGTATCTCCCTTTGCACGCGGTTAACCTCGACGGTTTCTGTTTTCTCTTCCTTATTCTCCGGTTCCTTCTCTTAGGCCTTAAGCTGCTTACTCGATGATTCGGTAACTTCTGAAGACGACTGCTCTCGTCCCACGTTCTGTCCGGCCATCAGGGCCATGATCGCCCTCTGATTCTCCTTCATCTCGAGCGTCAACTGCTCAAGGTGTTTCCCGAACAGCTGTATGGTCTCTTTAAACTCTCCCATTTGCTTTTCCTGGTTCTCCAGGCGTTCTTCCGTCTGCCTTTGAGCCATTGCGCGTGTTTTCCCCAGGATTCAACGTGCTCTGATACCAATATGTAAGGTATCCTCCTTCCTTAACCTGCAAGAAACACAAGAATACACAGAGCAACACCCAAACCACACTGATAATGGAGAGAAATAGACCCAACTCTGTGATATTGAGTGATTCTTCAATATCCAGAGGGGTTATTAGCCGATAGTATTGATAATGAGAGCCAAGAACAAGAACAAGGATATTCCAGCTTTCGAGAGGCTGGTTCTCTCCCTCTCAGACCACTCTCAGCCTAAGACAAAATGATCCTCCCCCTTTTCACTCTCTCTTTCAGCCTTTTACATCATTCCCTCACTCCCACATTCCCCGTGGTCCCCATGCTGTCCTTTTCTAACCGTTTCCCACTATTCCCTAAAATGCCCTTTCTCTTGTACACTCTTGTGATAGGAGGCCTAACAGCGTGTGCATGTGTGTGAGAGACAAGAAATGTTATTCCATTAATATGCATGTGTGTGAGAGACAAGAAATGTTATTCCATTAATAATATGAAAGGGAAAAATATACTTTTGGTCCTTCTGTTTGGAGTTGGTGATACTTTTAGTCCTTGAGATTTAGAAAATGATTTTAATGGTCTCGGAGCAAATTTTGACCATTAGTTGACTAACGGAAAAATAATGTGGCAGTTAGTTGATGACTAGGCATGCTCTTTTGGAAAATTTTATTAATTTTATTTTTATATTAAAACTTGATGATTCTCTTTCTTCTTCTTCCTTGCTTCTTTACCTTTTCTGCTGACCTTTGTTGGGCATCGACATCTCCTTCATTCTTCTCAATGTTTGTTGTTGCCACCGCTCTCCTTTATGACCTCTGTCGCATTGCTTCTTGATTTGAATGTAAGGGAGCTCCCTCAATTCAGATTTGAATGTAAGGGAGGAGCTCCTCGGACGAAGGGAAGCCCCCTTTCGTTCGGACCTGGATGGAGCAAGCTCTCCCTTCCTATTCTATTTAGGCTTGAATGATGGGAGAAGCTTTTGACTCCCTCCTATTCAAACTTGAATTCAACGGAAGCTCCCCTTTCGTTCAGGCTTCTCTCTACAATTTTTAGATTGGTGCAACAGTGGTCATGGAGGAGTGGCAGTGATAAATGCTGAGAAGTGAAGAGGGAGAGAGACCATGACCCCAACGAAGGTTGTTGGAGAAAGAGAAGGGGGAAAAAGAAGAAATAAAAAATGGAGAAGATGCTACCTGACATTGTCCAATCATCAAAATTTAGTATAAAATTAATGAAGTTTGCCAAATTAGCAAGTCCTGTCATCAACTAATTGCACATCATTTTTCCATTAATCAACTAATAGTCAATTTGAGCTCAAAGATCATTTAGAACCATTTTTTAAACCTTAGGGACTAAAAGTGTCTCTTTTAAAATCTCAGGGACCAAATAGACACCAATTTCAAACCTTAGGACCAAAAGTGAATTTTTCCCAATATGAAACATATAAAAGCCAACTAGTAGTTACAGGAACACTCTAATGGGAGTTAATCAAAGAAGATGAAGAATTATAAAGAACTCAGCAAGAGCACTATCATTTTAAAGTATGAGATTCCACAACTATCAAATTCCTATTTATTGCTTGGGAGACCACTATTTTTCTCCAACCAAATTTCCGGTAGGGTGGCCGTAGTTGCATGAAGCTACTATGTTTTCTTTCCTTTTACTTGAAAGGATGACCACAAAACATTGTTAATAGTTTTTAATCCTTCTAAGGAAAAGGCAATTTCAGCCGAGAGCATTATTAAACTTCCTTCAGTAAGAAAAAGCATTAGGACACCATCGGGAGATGTGACCTACATCTCCACTATTAGCTCGATATATATTGCACAAACCAGAGGAGAGGGCACTATTTTCTTCTGGATCTCATCACTTGTACTTGTACTGATGCCCCAAAGATATTAGGCATCTATCTCCAATCACCTGTAACAAACATAGCAAAACACAACCAAATATCCAACAAGGATCAAGCAAACAACCCAGCTATTAGAGAGAGCTGGGAAACTCTCCAGAGAACACTTCTCTATTCCAAAATGCAACCTGACCTCCCAGGCTCCCCAAAACCCCTACAAAACCCCCTACAGCACACACACTGACCGTACACAGCACAATCCCACCCCACACTAACAGTCCCCACCACACTCTCACATACGAACATGAACCCTTCCTCATTCTATTCCCTTTTTACCCTTCCTTTTGTAAGTGTGAATAAGTGGAGGCCTTAAAGAGTCAAATCAAAGATGCTAATCTTTCTCTAGCATTCGACCTTTCAGATTATCTTAGTTCCACCTCTTTGGCTGTAAGTGTGAAGAGTAGATTTGCGAGAGAAATGTTCTGAAATGTCAAGCAGCTAGAATCTGGAATCCCAAGCATTAGGCTAAAAGTTTTCCAACTTGGTTGAAAGGGGCAGCTGTTCCTCCACATCTCTATCATAGTAATTTCTTCTGAAATTGAGTATTCACTCACCTAAATGGCTAAATCTTATGGCAGAATCATCAGTGATATTCATCTGAACCTTGAGGTCATAGGTCAAGAAAGAGATATACCTCCATCTCCCTTCAGTATGCATCCAATTAACTGTCTGTAATTGACTCATTGAATCTTCGGGAATAGAAACATCAAAGAATCAATTGGGGGGGGGGGGGGGGGGGACAGTGGTCGATGTTCAATTATCCTGGAGCGAATTATTGCTTTTCTCATTCTTCTTGAACATTCTTTTTCCATGTAGCTATTCCAGTACGGTACCATACTGAAATTTAGTTCCATTTTTTAGGCCCTCCATCCCCCGAAGTATGCCACCTTATTGTTTGAACCTTATATCCACATATAAGTCTTTAATAGATTTTCAGTGATGGATGGCCATCTACTGCTGGTCTTTTATAAGAATAAAACTAAAACTTTCTAATGTATCGTAAACAGGAAAAAGGAAAAAAAAAAAAAACGAAAAAAGAAAAATGAAATTCTATTCCACTAGTTGGACTGAGAGTTTCTTTCAAGTATCCTGGAGCGAATTATTGCTTTTCTCATTCTTCTTGAACATTCTTTTTCCATGTAGCTATTCCAGTACGGTACCATACTGAAATTTAGTTCCATTTTTTAGGCCCTCCATCCCCCGAAGTATGCCACCTTATTGTTTGAACCTTATATCCACATATAAGTCTTTAATAGATTTTCAGTGATGGATGGCCATCTACTGCTGGTCTTTTATAAGAATAAAACTAAAACTTTCTAATGTATCGTAAACAGGAAAAAGGAAAAAAAAAAAAAAACGAAAAAAGAAAAATGAAATTCTATTCCACTAGTTGGACTGAGAGTTTCTTTCAAGTATTTTTCTCCATGTTTGTGTGTTTATTACGTATTATCCTGTTACATTGTCTCAGGTTCTTGAAGAGGGAGCATCTTATTGATGTTACTGAGGTGTTTAGAGCTCTTAAACGTGAGAAGTATTTTCGTTTGGCCAAGCTTATCTTCTACTTGCTTCTGTTCCTCATAGTGATCTTCAGGTTAGTCTGCATTTTTCATTGTCTCATTCTGCTTTTTCTCTCAAGTATTTAGAAGTTGGGATAATCCTGATTGAAGTTTTCCTTGCTGTTTTCTGTATAGAATAATAATGGTTGCCGGAGTGAAATCTGTTTTTGACTCTGCACCTGAGGATTTAGACATTCGCTCCACTGTTCTCGAATTCTAGAGTATTTATTTGGCCATCTAGCTTGAAGTTGAATCCATCCTCTGTTTTAAAACACGTATATGATTACACGAGAAATAGTCAACTTCGTTATTCATTGCAAAGTTCTTAAAGATAATTTTGTTGCACTAATTTTGAGATTGTTTTGTTGGTTTTGGAAACTATATACCATATTTCTCTGTTGTCTTGACGCCAGTACTTTGTCAATAATGCGTTACTCCAGGATCTTGGACTTTGTTCTGTTTGA

mRNA sequence

ATGTGTAAATAAAGTCAGACTTCTCAAGTCTCAACACACTGAGAGCAAATTGTGATTGAAATAAATTAAACTAAACTTAGAAATGTGGTTGAAATTTGAAGCATCATGGTGGAACTACTCAAAAAGTAAATGCAATATGTAGCTTCAGCCTCCAGAGTTCAAATTCCCAAGAACATTGAACTTGCGAGATCGCCATAGCATTAACAATTGAACTTCGAATTCTGGAATTTCTCAACTGAAGCTGCGCGGTTGCAGAAATGGCGTGGAATCTGATCTTTTGGTTCATCTCTTTCTGTATCAACGTCGCCCTCCTCGTCCTCAACTTTTACCAGCTTTTGGTATTGACGGATTTGGAGGCAGATTATCTGAACATCTATGATTCATCTTCCCGCATTAATAAACTTGTCATTCCAGAGTTTTTAGTGCAAGGAGTATTTTGCTCTCTTTTCGTCATCACAGGCCACTGGTTCATGTTCCTTATAACCGTCCCTCTTACCTGCTATCACATAAATTTGTTCTTGAAGAGGGAGCATCTTATTGATGTTACTGAGGTGTTTAGAGCTCTTAAACGTGAGAAGTATTTTCGTTTGGCCAAGCTTATCTTCTACTTGCTTCTGTTCCTCATAGTGATCTTCAGAATAATAATGGTTGCCGGAGTGAAATCTGTTTTTGACTCTGCACCTGAGGATTTAGACATTCGCTCCACTGTTCTCGAATTCTAGAGTATTTATTTGGCCATCTAGCTTGAAGTTGAATCCATCCTCTGTTTTAAAACACGTATATGATTACACGAGAAATAGTCAACTTCGTTATTCATTGCAAAGTTCTTAAAGATAATTTTGTTGCACTAATTTTGAGATTGTTTTGTTGGTTTTGGAAACTATATACCATATTTCTCTGTTGTCTTGACGCCAGTACTTTGTCAATAATGCGTTACTCCAGGATCTTGGACTTTGTTCTGTTTGA

Coding sequence (CDS)

ATGGCGTGGAATCTGATCTTTTGGTTCATCTCTTTCTGTATCAACGTCGCCCTCCTCGTCCTCAACTTTTACCAGCTTTTGGTATTGACGGATTTGGAGGCAGATTATCTGAACATCTATGATTCATCTTCCCGCATTAATAAACTTGTCATTCCAGAGTTTTTAGTGCAAGGAGTATTTTGCTCTCTTTTCGTCATCACAGGCCACTGGTTCATGTTCCTTATAACCGTCCCTCTTACCTGCTATCACATAAATTTGTTCTTGAAGAGGGAGCATCTTATTGATGTTACTGAGGTGTTTAGAGCTCTTAAACGTGAGAAGTATTTTCGTTTGGCCAAGCTTATCTTCTACTTGCTTCTGTTCCTCATAGTGATCTTCAGAATAATAATGGTTGCCGGAGTGAAATCTGTTTTTGACTCTGCACCTGAGGATTTAGACATTCGCTCCACTGTTCTCGAATTCTAG

Protein sequence

MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVFCSLFVITGHWFMFLITVPLTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVAGVKSVFDSAPEDLDIRSTVLEF
Homology
[Close]
BLAST of Lcy04g004280 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.8e-33
Identity = 71/132 (53.79%), Postives = 100/132 (75.76%), Query Frame = 0 

Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60
           MAW+L  W +SF +++AL+   FYQ++ LTDLEADYLN +++S+RIN+LVIPEF++QG  
Sbjct: 1   MAWDLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSL 60

Query: 61  CSLFVITGHWFMFLITVPLTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120
           C LF++T HW  FL+ VP+T YH  L+ +R +LIDVTEVFR +  EK  R  KL FY+ L
Sbjct: 61  CLLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFL 120

Query: 121 FLIVIFRIIMVA 133
           F++V+FR+ + A
Sbjct: 121 FIMVVFRLTLSA 132

[Close]
BLAST of Lcy04g004280 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.8e-25
Identity = 63/125 (50.40%), Postives = 87/125 (69.60%), Query Frame = 0 

Query: 8   WFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVFCSLFVIT 67
           W ISF   +AL+ +  YQL+ L DLE DY+N YDS+SRIN +V+PEF+VQGV C  +++T
Sbjct: 7   WLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLT 66

Query: 68  GHWFMFLITVPLTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFR 127
           GHWFM L+ +P   Y+ +L+ KR+HL+DVTE+F  L  EK  RL KL + +L   + IF 
Sbjct: 67  GHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFW 126

Query: 128 IIMVA 133
           +I  A
Sbjct: 127 MIYSA 131

[Close]
BLAST of Lcy04g004280 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.4e-24
Identity = 61/122 (50.00%), Postives = 84/122 (68.85%), Query Frame = 0 

Query: 8   WFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVFCSLFVIT 67
           W ISF I + LL L  YQL+ L DLE DY+N YDS+SRIN +V+PE ++QG  C  +++T
Sbjct: 7   WIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVT 66

Query: 68  GHWFMFLITVPLTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFR 127
           GHWFM L+ VP   Y+ +L+ +++HLIDVTE+F  L  EK  RL KL + +L   + IF 
Sbjct: 67  GHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFW 126

Query: 128 II 130
           +I
Sbjct: 127 LI 128

[Close]
BLAST of Lcy04g004280 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 105.9 bits (263), Expect = 4.1e-22
Identity = 56/114 (49.12%), Postives = 78/114 (68.42%), Query Frame = 0 

Query: 19  LVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVFCSLFVITGHWFMFLITVP 78
           L    + L+ L DLE DY+N YDS+SRIN +V+PEF+VQGV C  +++TGHWFM L+ +P
Sbjct: 10  LANGIFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLP 69

Query: 79  LTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVA 133
              Y+ +L+ KR+HL+DVTE+F  L  EK  RL KL + +L   + IF +I  A
Sbjct: 70  YLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSA 123

[Close]
BLAST of Lcy04g004280 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 2.3e-20
Identity = 55/126 (43.65%), Postives = 83/126 (65.87%), Query Frame = 0 

Query: 4   NLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVFCSL 63
           +L+ W ISF     L+++  YQL  L DLE D +N YD SSRIN++V+PEF +QG+ C  
Sbjct: 3   DLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLY 62

Query: 64  FVITGHWFMFLITVPLTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLI 123
           +++TGHWFM ++++P   Y+I L++KREHL DVTE++   K E+  R+ K+    L   I
Sbjct: 63  YILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSIFI 122

Query: 124 VIFRII 130
             + +I
Sbjct: 123 TTYWLI 128

[Close]
BLAST of Lcy04g004280 vs. ExPASy TrEMBL
Match: A0A6J1HTE7 (protein cornichon homolog 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467288 PE=3 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.6e-72
Identity = 144/154 (93.51%), Postives = 152/154 (98.70%), Query Frame = 0 

Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60
           MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60

Query: 61  CSLFVITGHWFMFLITVPLTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120
           CSLF+ TGHWFMFLITVP++CYHINLFLK+EHLIDVTEVFR LKREKYFRLAKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLIVIFRIIMVAGVKSVFDSAPEDLDIRSTVLEF 155
           FL+VIFRIIMVAG+KSVFDSAP+D+DIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

[Close]
BLAST of Lcy04g004280 vs. ExPASy TrEMBL
Match: A0A6J1ESA6 (protein cornichon homolog 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435524 PE=3 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 5.9e-72
Identity = 143/154 (92.86%), Postives = 152/154 (98.70%), Query Frame = 0 

Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60
           MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEF+VQGVF
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60

Query: 61  CSLFVITGHWFMFLITVPLTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120
           CSLF+ TGHWFMFLITVP++CYHINLFLK+EHLIDVTEVFR LKREKYFRLAKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLIVIFRIIMVAGVKSVFDSAPEDLDIRSTVLEF 155
           FL+VIFRIIMVAG+KSVFDSAP+D+DIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

[Close]
BLAST of Lcy04g004280 vs. ExPASy TrEMBL
Match: A0A1S3B5Z0 (protein cornichon homolog 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486176 PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.7e-71
Identity = 143/154 (92.86%), Postives = 151/154 (98.05%), Query Frame = 0 

Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60
           MAWNLIFWFISFC N+ALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLV+PEFLVQGVF
Sbjct: 1   MAWNLIFWFISFCFNIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVLPEFLVQGVF 60

Query: 61  CSLFVITGHWFMFLITVPLTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120
           CSLF+ TGHWFMFLITVP+TCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120

Query: 121 FLIVIFRIIMVAGVKSVFDSAPEDLDIRSTVLEF 155
           FLIVIFRIIMVA +KSVFDSAPED+DIRS+VLE+
Sbjct: 121 FLIVIFRIIMVAEMKSVFDSAPEDIDIRSSVLEY 154

[Close]
BLAST of Lcy04g004280 vs. ExPASy TrEMBL
Match: A0A6J1HRR4 (protein cornichon homolog 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466123 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 6.5e-71
Identity = 139/154 (90.26%), Postives = 151/154 (98.05%), Query Frame = 0 

Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60
           MAW+LIFWF+SFCIN+ALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLV+PEFLVQG+F
Sbjct: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60

Query: 61  CSLFVITGHWFMFLITVPLTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120
           CSLF+ TGHWFMFLITVP++CYHINLFLKREHLIDVTEVF+ LKREKYFR AKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120

Query: 121 FLIVIFRIIMVAGVKSVFDSAPEDLDIRSTVLEF 155
           FL+VIFRIIMVAG+KSVFDSAPED+DIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPEDIDIRSTVLEF 154

[Close]
BLAST of Lcy04g004280 vs. ExPASy TrEMBL
Match: A0A6J1EB17 (protein cornichon homolog 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432423 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 6.5e-71
Identity = 139/154 (90.26%), Postives = 151/154 (98.05%), Query Frame = 0 

Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60
           MAW+LIFWF+SFCIN+ALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLV+PEFLVQG+F
Sbjct: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60

Query: 61  CSLFVITGHWFMFLITVPLTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120
           CSLF+ TGHWFMFLITVP++CYHINLFLKREHLIDVTEVF+ LKREKYFR AKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120

Query: 121 FLIVIFRIIMVAGVKSVFDSAPEDLDIRSTVLEF 155
           FL+VIFRIIMVAG+KSVFDSAPED+DIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPEDIDIRSTVLEF 154

[Close]
BLAST of Lcy04g004280 vs. NCBI nr
Match: XP_031740205.1 (protein cornichon homolog 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 282.3 bits (721), Expect = 2.4e-72
Identity = 145/154 (94.16%), Postives = 152/154 (98.70%), Query Frame = 0 

Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60
           MAWNLIFWFISFC N+ALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF
Sbjct: 1   MAWNLIFWFISFCFNIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60

Query: 61  CSLFVITGHWFMFLITVPLTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120
           CSLF+ TGHWFMFLITVP+TCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120

Query: 121 FLIVIFRIIMVAGVKSVFDSAPEDLDIRSTVLEF 155
           FL+VIFRII+VAG+KSVFDSAPEDLDIRS+VLEF
Sbjct: 121 FLVVIFRIIVVAGMKSVFDSAPEDLDIRSSVLEF 154

[Close]
BLAST of Lcy04g004280 vs. NCBI nr
Match: XP_022967916.1 (protein cornichon homolog 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 281.2 bits (718), Expect = 5.4e-72
Identity = 144/154 (93.51%), Postives = 152/154 (98.70%), Query Frame = 0 

Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60
           MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60

Query: 61  CSLFVITGHWFMFLITVPLTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120
           CSLF+ TGHWFMFLITVP++CYHINLFLK+EHLIDVTEVFR LKREKYFRLAKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLIVIFRIIMVAGVKSVFDSAPEDLDIRSTVLEF 155
           FL+VIFRIIMVAG+KSVFDSAP+D+DIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

[Close]
BLAST of Lcy04g004280 vs. NCBI nr
Match: KAG7033543.1 (Protein cornichon-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 280.8 bits (717), Expect = 7.1e-72
Identity = 143/154 (92.86%), Postives = 152/154 (98.70%), Query Frame = 0 

Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60
           MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFL+QGVF
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVF 60

Query: 61  CSLFVITGHWFMFLITVPLTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120
           CSLF+ TGHWFMFLITVP++CYHINLFLK+EHLIDVTEVFR LKREKYFRLAKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLIVIFRIIMVAGVKSVFDSAPEDLDIRSTVLEF 155
           FL+VIFRIIMVAG+KSVFDSAP+D+DIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

[Close]
BLAST of Lcy04g004280 vs. NCBI nr
Match: XP_022928680.1 (protein cornichon homolog 1-like isoform X1 [Cucurbita moschata] >KAG6603241.1 Protein cornichon-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71
Identity = 143/154 (92.86%), Postives = 152/154 (98.70%), Query Frame = 0 

Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60
           MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEF+VQGVF
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60

Query: 61  CSLFVITGHWFMFLITVPLTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120
           CSLF+ TGHWFMFLITVP++CYHINLFLK+EHLIDVTEVFR LKREKYFRLAKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLIVIFRIIMVAGVKSVFDSAPEDLDIRSTVLEF 155
           FL+VIFRIIMVAG+KSVFDSAP+D+DIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

[Close]
BLAST of Lcy04g004280 vs. NCBI nr
Match: XP_038883915.1 (protein cornichon homolog 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71
Identity = 144/154 (93.51%), Postives = 152/154 (98.70%), Query Frame = 0 

Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60
           MAW+LIFWFISFC N+ALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF
Sbjct: 1   MAWSLIFWFISFCFNIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60

Query: 61  CSLFVITGHWFMFLITVPLTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120
           CSLF+ TGHWFMFLITVP++CYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120

Query: 121 FLIVIFRIIMVAGVKSVFDSAPEDLDIRSTVLEF 155
           FLIVIFRIIMVAG+KSVFDSAPED+DIRS+VLEF
Sbjct: 121 FLIVIFRIIMVAGMKSVFDSAPEDIDIRSSVLEF 154

[Close]
BLAST of Lcy04g004280 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein )

HSP 1 Score: 141.4 bits (355), Expect = 6.3e-34
Identity = 71/132 (53.79%), Postives = 100/132 (75.76%), Query Frame = 0 

Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60
           MAW+L  W +SF +++AL+   FYQ++ LTDLEADYLN +++S+RIN+LVIPEF++QG  
Sbjct: 1   MAWDLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSL 60

Query: 61  CSLFVITGHWFMFLITVPLTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120
           C LF++T HW  FL+ VP+T YH  L+ +R +LIDVTEVFR +  EK  R  KL FY+ L
Sbjct: 61  CLLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFL 120

Query: 121 FLIVIFRIIMVA 133
           F++V+FR+ + A
Sbjct: 121 FIMVVFRLTLSA 132

[Close]
BLAST of Lcy04g004280 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein )

HSP 1 Score: 117.1 bits (292), Expect = 1.3e-26
Identity = 63/125 (50.40%), Postives = 87/125 (69.60%), Query Frame = 0 

Query: 8   WFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVFCSLFVIT 67
           W ISF   +AL+ +  YQL+ L DLE DY+N YDS+SRIN +V+PEF+VQGV C  +++T
Sbjct: 7   WLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLT 66

Query: 68  GHWFMFLITVPLTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFR 127
           GHWFM L+ +P   Y+ +L+ KR+HL+DVTE+F  L  EK  RL KL + +L   + IF 
Sbjct: 67  GHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFW 126

Query: 128 IIMVA 133
           +I  A
Sbjct: 127 MIYSA 131

[Close]
BLAST of Lcy04g004280 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein )

HSP 1 Score: 112.8 bits (281), Expect = 2.4e-25
Identity = 61/122 (50.00%), Postives = 84/122 (68.85%), Query Frame = 0 

Query: 8   WFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVFCSLFVIT 67
           W ISF I + LL L  YQL+ L DLE DY+N YDS+SRIN +V+PE ++QG  C  +++T
Sbjct: 7   WIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVT 66

Query: 68  GHWFMFLITVPLTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFR 127
           GHWFM L+ VP   Y+ +L+ +++HLIDVTE+F  L  EK  RL KL + +L   + IF 
Sbjct: 67  GHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFW 126

Query: 128 II 130
           +I
Sbjct: 127 LI 128

[Close]
BLAST of Lcy04g004280 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein )

HSP 1 Score: 105.9 bits (263), Expect = 2.9e-23
Identity = 56/114 (49.12%), Postives = 78/114 (68.42%), Query Frame = 0 

Query: 19  LVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVFCSLFVITGHWFMFLITVP 78
           L    + L+ L DLE DY+N YDS+SRIN +V+PEF+VQGV C  +++TGHWFM L+ +P
Sbjct: 10  LANGIFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLP 69

Query: 79  LTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLIVIFRIIMVA 133
              Y+ +L+ KR+HL+DVTE+F  L  EK  RL KL + +L   + IF +I  A
Sbjct: 70  YLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSA 123

[Close]
BLAST of Lcy04g004280 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.6e-21
Identity = 55/126 (43.65%), Postives = 83/126 (65.87%), Query Frame = 0 

Query: 4   NLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVFCSL 63
           +L+ W ISF     L+++  YQL  L DLE D +N YD SSRIN++V+PEF +QG+ C  
Sbjct: 3   DLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLY 62

Query: 64  FVITGHWFMFLITVPLTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLLFLI 123
           +++TGHWFM ++++P   Y+I L++KREHL DVTE++   K E+  R+ K+    L   I
Sbjct: 63  YILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSIFI 122

Query: 124 VIFRII 130
             + +I
Sbjct: 123 TTYWLI 128

The following BLAST results are available for this feature:
BLAST of Lcy04g004280 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9C7D78.8e-3353.79Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV... [more]
Q84W041.8e-2550.40Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV... [more]
Q8GWT53.4e-2450.00Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV... [more]
Q3EDD74.1e-2249.12Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234... [more]
Q9SZ742.3e-2043.65Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV... [more]
BLAST of Lcy04g004280 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HTE72.6e-7293.51protein cornichon homolog 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1ESA65.9e-7292.86protein cornichon homolog 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A1S3B5Z01.7e-7192.86protein cornichon homolog 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486176 P... [more]
A0A6J1HRR46.5e-7190.26protein cornichon homolog 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1EB176.5e-7190.26protein cornichon homolog 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC... [more]
BLAST of Lcy04g004280 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031740205.12.4e-7294.16protein cornichon homolog 1 isoform X1 [Cucumis sativus][more]
XP_022967916.15.4e-7293.51protein cornichon homolog 1-like isoform X1 [Cucurbita maxima][more]
KAG7033543.17.1e-7292.86Protein cornichon-like 1 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022928680.11.2e-7192.86protein cornichon homolog 1-like isoform X1 [Cucurbita moschata] >KAG6603241.1 P... [more]
XP_038883915.11.2e-7193.51protein cornichon homolog 1 isoform X1 [Benincasa hispida][more]
BLAST of Lcy04g004280 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G12180.16.3e-3453.79Cornichon family protein [more]
AT1G12390.11.3e-2650.40Cornichon family protein [more]
AT1G62880.12.4e-2550.00Cornichon family protein [more]
AT1G12340.12.9e-2349.12Cornichon family protein [more]
AT4G12090.11.6e-2143.65Cornichon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003377CornichonSMARTSM01398Cornichon_2coord: 5..126
e-value: 2.2E-51
score: 186.7
IPR003377CornichonPFAMPF03311Cornichoncoord: 6..126
e-value: 2.1E-38
score: 131.3
NoneNo IPR availablePANTHERPTHR12290CORNICHON-RELATEDcoord: 1..131
NoneNo IPR availablePANTHERPTHR12290:SF11PROTEIN CORNICHONcoord: 1..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy04g004280.1Lcy04g004280.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0016021 integral component of membrane