Lcy04g004180 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g004180
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	E3 ubiquitin-protein ligase RNF181-like
Location	Chr04: 28060289 .. 28060978 (-)
RNA-Seq Expression	Lcy04g004180
Synteny	Lcy04g004180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTACTTCTTCGTCCATTCATTATCGTCTTTACAGTGTCGCCAGACCCGCTTCCGCCGATCAATCGCATCAAGTTCTCGAACTACGATTGCGTTACATCCGCCGTCCTCTGATCTCTGCTCCTCCGGCCGGAATCCTCCATGAAACACCACCGCCTCGACTGAAAAAGGCGCTCTTCCATCTCTCTCTGCGACAACTTCAAGATCCGCTCTCCTACGTCAAGCGCTGGCTCTCCTCACTCAACATCCGCTCCGCTGCTTGCGAAGTCATCGCTCGGCATATCGCCTCCTACATCATGCAAACAGCCGGCGGAAATAGAGACACGAACTTCCACATCGTCGCCGAGATCGATCACATCCGACTGATCACCTCGATGGAGGATGAGGATCCAATCCCCGGACTCTACAGTACTGGCGGTGCACCGGTGGAGGAGAAGGCTGTTTCCGAAGAAGCTCCGCCTGAGAGCGTGAGGAAGGAGAAATTGGAAGAGAATGAGAATGGAGAAGAATTGGGAGATTGCAGTATCTGTTTGGATGAAATGAATTGCAATTGCAAAAAGAAGGAGGTGATAAAGATCCCCTGCGGCCATGCCTATCATCATTCATGCATCTCCAAATGGTTAGAAGGCATTGCCATTGGAGGACTCAGAGCGACATTATTCATTTTTTCGGGGGTTCTTTTGCAATAA

mRNA sequence

ATGTCTACTTCTTCGTCCATTCATTATCGTCTTTACAGTGTCGCCAGACCCGCTTCCGCCGATCAATCGCATCAAGTTCTCGAACTACGATTGCGTTACATCCGCCGTCCTCTGATCTCTGCTCCTCCGGCCGGAATCCTCCATGAAACACCACCGCCTCGACTGAAAAAGGCGCTCTTCCATCTCTCTCTGCGACAACTTCAAGATCCGCTCTCCTACGTCAAGCGCTGGCTCTCCTCACTCAACATCCGCTCCGCTGCTTGCGAAGTCATCGCTCGGCATATCGCCTCCTACATCATGCAAACAGCCGGCGGAAATAGAGACACGAACTTCCACATCGTCGCCGAGATCGATCACATCCGACTGATCACCTCGATGGAGGATGAGGATCCAATCCCCGGACTCTACAGTACTGGCGGTGCACCGGTGGAGGAGAAGGCTGTTTCCGAAGAAGCTCCGCCTGAGAGCGTGAGGAAGGAGAAATTGGAAGAGAATGAGAATGGAGAAGAATTGGGAGATTGCAGTATCTGTTTGGATGAAATGAATTGCAATTGCAAAAAGAAGGAGGTGATAAAGATCCCCTGCGGCCATGCCTATCATCATTCATGCATCTCCAAATGGTTAGAAGGCATTGCCATTGGAGGACTCAGAGCGACATTATTCATTTTTTCGGGGGTTCTTTTGCAATAA

Coding sequence (CDS)

ATGTCTACTTCTTCGTCCATTCATTATCGTCTTTACAGTGTCGCCAGACCCGCTTCCGCCGATCAATCGCATCAAGTTCTCGAACTACGATTGCGTTACATCCGCCGTCCTCTGATCTCTGCTCCTCCGGCCGGAATCCTCCATGAAACACCACCGCCTCGACTGAAAAAGGCGCTCTTCCATCTCTCTCTGCGACAACTTCAAGATCCGCTCTCCTACGTCAAGCGCTGGCTCTCCTCACTCAACATCCGCTCCGCTGCTTGCGAAGTCATCGCTCGGCATATCGCCTCCTACATCATGCAAACAGCCGGCGGAAATAGAGACACGAACTTCCACATCGTCGCCGAGATCGATCACATCCGACTGATCACCTCGATGGAGGATGAGGATCCAATCCCCGGACTCTACAGTACTGGCGGTGCACCGGTGGAGGAGAAGGCTGTTTCCGAAGAAGCTCCGCCTGAGAGCGTGAGGAAGGAGAAATTGGAAGAGAATGAGAATGGAGAAGAATTGGGAGATTGCAGTATCTGTTTGGATGAAATGAATTGCAATTGCAAAAAGAAGGAGGTGATAAAGATCCCCTGCGGCCATGCCTATCATCATTCATGCATCTCCAAATGGTTAGAAGGCATTGCCATTGGAGGACTCAGAGCGACATTATTCATTTTTTCGGGGGTTCTTTTGCAATAA

Protein sequence

MSTSSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAPPAGILHETPPPRLKKALFHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYIMQTAGGNRDTNFHIVAEIDHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPESVRKEKLEENENGEELGDCSICLDEMNCNCKKKEVIKIPCGHAYHHSCISKWLEGIAIGGLRATLFIFSGVLLQ

Homology

[Close]

BLAST of Lcy04g004180 vs. ExPASy Swiss-Prot
Match: Q9Y7K6 (Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC2A9.04c PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 5.7e-04
Identity = 18/36 (50.00%), Postives = 25/36 (69.44%), Query Frame = 0


Query: 174 CSICLDEMNCNCKKKEVIKIPCGHAYHHSCISKWLE 210
           C IC D+MN N  +K+  K+PCGH +  +C+ KWLE
Sbjct: 107 CPICYDDMNEN-DEKQATKMPCGHIFGKNCLQKWLE 141

[Close]

BLAST of Lcy04g004180 vs. ExPASy TrEMBL
Match: A0A0A0K696 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G026750 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 2.6e-39
Identity = 104/216 (48.15%), Postives = 136/216 (62.96%), Query Frame = 0


Query: 4   SSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAP----PAGILHETPPPRLKKAL 63
           S+ I YRLY     AS    + VL++ + +I++ +  +P    P  +LH+TP      AL
Sbjct: 6   SNPIQYRLY-----ASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 65

Query: 64  FHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYIMQTAGGNRDTNFHIVAEIDH 123
           F+LSLRQLQ PL Y+ + LSSLNIR AA + +AR IAS+I+Q    N +TNFHI+AE+D 
Sbjct: 66  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 125

Query: 124 IRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPE------SVRKEKLEENENGEELGD 183
           IRLI        +P +   GGA  EE  V +EAPP         R E+L   E  EELGD
Sbjct: 126 IRLIW-------LPSM-GGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGD 185

Query: 184 CSICLDEMNCNCKKKEVIKIPCGHAYHHSCISKWLE 210
           CSICLDE+  +C+K+EV++IPCGH YH SCI KWLE
Sbjct: 186 CSICLDEL--SCEKREVMRIPCGHVYHESCIFKWLE 206

[Close]

BLAST of Lcy04g004180 vs. ExPASy TrEMBL
Match: A0A0A0K2W2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G025210 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 2.6e-39
Identity = 104/216 (48.15%), Postives = 136/216 (62.96%), Query Frame = 0


Query: 4   SSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAP----PAGILHETPPPRLKKAL 63
           S+ I YRLY     AS    + VL++ + +I++ +  +P    P  +LH+TP      AL
Sbjct: 6   SNPIQYRLY-----ASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 65

Query: 64  FHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYIMQTAGGNRDTNFHIVAEIDH 123
           F+LSLRQLQ PL Y+ + LSSLNIR AA + +AR IAS+I+Q    N +TNFHI+AE+D 
Sbjct: 66  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 125

Query: 124 IRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPE------SVRKEKLEENENGEELGD 183
           IRLI        +P +   GGA  EE  V +EAPP         R E+L   E  EELGD
Sbjct: 126 IRLIW-------LPSM-GGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGD 185

Query: 184 CSICLDEMNCNCKKKEVIKIPCGHAYHHSCISKWLE 210
           CSICLDE+  +C+K+EV++IPCGH YH SCI KWLE
Sbjct: 186 CSICLDEL--SCEKREVMRIPCGHVYHESCIFKWLE 206

[Close]

BLAST of Lcy04g004180 vs. ExPASy TrEMBL
Match: A0A5D3E1S5 (E3 ubiquitin-protein ligase RNF181-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G00800 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 8.2e-38
Identity = 99/216 (45.83%), Postives = 133/216 (61.57%), Query Frame = 0


Query: 4   SSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAPPAG----ILHETPPPRLKKAL 63
           S+ I YRLY      S    + +LE+R+ +  + +  +P  G    ILH+TP      AL
Sbjct: 6   SNPIQYRLY-----GSGTGGNGILEVRISFFEQMISLSPVTGRPHQILHQTPRIPYHNAL 65

Query: 64  FHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYIMQTAGGNRDTNFHIVAEIDH 123
            +L+LRQLQ PL Y+ ++LSSLNIR AA + +AR IAS+I+Q    N D NFHI+AE+D 
Sbjct: 66  VYLTLRQLQSPLFYITQFLSSLNIRPAASQSMARQIASHILQMPDRNGDRNFHIIAEVDF 125

Query: 124 IRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPE------SVRKEKLEENENGEELGD 183
           IR+I    +E  +       GA  EE  V +EAPP         R E+L+  E  E+LGD
Sbjct: 126 IRVIWLELEEQSM-------GAGAEETVVFDEAPPALKRGVGKARGERLKSEEKVEDLGD 185

Query: 184 CSICLDEMNCNCKKKEVIKIPCGHAYHHSCISKWLE 210
           CSICLDE+  +C+K+EVI+IPCGH YH SCI KWL+
Sbjct: 186 CSICLDEL--SCEKREVIRIPCGHVYHESCIFKWLK 207

[Close]

BLAST of Lcy04g004180 vs. ExPASy TrEMBL
Match: A0A1S4DUZ4 (E3 ubiquitin-protein ligase RNF181-like OS=Cucumis melo OX=3656 GN=LOC107990564 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 8.2e-38
Identity = 99/216 (45.83%), Postives = 133/216 (61.57%), Query Frame = 0


Query: 4   SSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAPPAG----ILHETPPPRLKKAL 63
           S+ I YRLY      S    + +LE+R+ +  + +  +P  G    ILH+TP      AL
Sbjct: 6   SNPIQYRLY-----GSGTGGNGILEVRISFFEQMISLSPVTGRPHQILHQTPRIPYHNAL 65

Query: 64  FHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYIMQTAGGNRDTNFHIVAEIDH 123
            +L+LRQLQ PL Y+ ++LSSLNIR AA + +AR IAS+I+Q    N D NFHI+AE+D 
Sbjct: 66  VYLTLRQLQSPLFYITQFLSSLNIRPAASQSMARQIASHILQMPDRNGDRNFHIIAEVDF 125

Query: 124 IRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPE------SVRKEKLEENENGEELGD 183
           IR+I    +E  +       GA  EE  V +EAPP         R E+L+  E  E+LGD
Sbjct: 126 IRVIWLELEEQSM-------GAGAEETVVFDEAPPALKRGVGKARGERLKSEEKVEDLGD 185

Query: 184 CSICLDEMNCNCKKKEVIKIPCGHAYHHSCISKWLE 210
           CSICLDE+  +C+K+EVI+IPCGH YH SCI KWL+
Sbjct: 186 CSICLDEL--SCEKREVIRIPCGHVYHESCIFKWLK 207

[Close]

BLAST of Lcy04g004180 vs. ExPASy TrEMBL
Match: A0A6J1EKL4 (E3 ubiquitin-protein ligase arkadia-like OS=Cucurbita moschata OX=3662 GN=LOC111435522 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-30
Identity = 85/169 (50.30%), Postives = 105/169 (62.13%), Query Frame = 0


Query: 43  PAGILHETPPPRLKKALFHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYIMQT 102
           P  IL ET P  +  ALFHLSLRQL DPL ++ R LS+L+I +AACEVI   IAS I Q 
Sbjct: 17  PPQILFETRPTPVNDALFHLSLRQLHDPLFHIPRLLSTLDIHAAACEVIGWKIASQIAQL 76

Query: 103 AGGNRDTNFHIVAEIDHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPESVRKEKL 162
           + GNR+T+FHIV E+D I+ I   +      G    GG  VEE  V +E P    ++  +
Sbjct: 77  SAGNRETSFHIVVEVDFIQNIWMGQVAGMRQG-QGNGGGLVEETVVLDELPARRRQRRGV 136

Query: 163 ---EENENGEELGDCSICLDEMNCNCKKKEVIKIPCGHAYHHSCISKWL 209
               E E  +ELGDC ICLDEM    KK+EVI+ PCGH YH SCI +WL
Sbjct: 137 VARVEVEEEKELGDCCICLDEM--MNKKREVIRTPCGHVYHESCIFQWL 182

[Close]

BLAST of Lcy04g004180 vs. NCBI nr
Match: XP_023518048.1 (uncharacterized protein LOC111781594 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 181.4 bits (459), Expect = 8.7e-42
Identity = 106/216 (49.07%), Postives = 139/216 (64.35%), Query Frame = 0


Query: 3   TSSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAPPAGI--LHETPPPRLKKALF 62
           TS  I YR+Y     AS +Q +QVL+L+L YIRR +  +P +G+  L ET P  L+  LF
Sbjct: 5   TSRPIQYRIYGYTSAASGEQPYQVLQLQLHYIRRDISVSPLSGVTYLQETAPILLRNLLF 64

Query: 63  HLSLRQLQDPL---SYVKRWLSSLNIRSAACEVIARHIASYIMQTAGGNRDTNFHIVAEI 122
            L L++L DP+    YV + LS LN+RS ACE IA  I SY +  AGGNR+T+FH V ++
Sbjct: 65  PLPLQELHDPVILQVYVAQLLSLLNVRSPACEAIAERIVSYTILMAGGNRETSFHTVVDL 124

Query: 123 DHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPESVRKEKLEENENGEELGDCSIC 182
           D IRLIT ME+   +   +S G A  EE  + EEA P +   EK+E  ENGEE+GDCSIC
Sbjct: 125 DFIRLITWMEENHGLFQGWSNGSAEGEETVILEEARPVT---EKVE--ENGEEMGDCSIC 184

Query: 183 LDEMNCN-----CKKKEVIKIPCGHAYHHSCISKWL 209
           L+E+N N      K++EVI++ CGH YH SCI  WL
Sbjct: 185 LEELNGNGNGEGKKREEVIRMQCGHVYHESCIFNWL 215

[Close]

BLAST of Lcy04g004180 vs. NCBI nr
Match: KAG6595650.1 (hypothetical protein SDJN03_12203, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 177.9 bits (450), Expect = 9.6e-41
Identity = 106/218 (48.62%), Postives = 139/218 (63.76%), Query Frame = 0


Query: 3   TSSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAPPAGI--LHETPPPRLKKALF 62
           TS  I YR+Y     AS +Q +QVL+L+LRY RR +  +P +G+  L ET P  L+  LF
Sbjct: 5   TSRPIQYRIYGYTSAASGEQPYQVLQLQLRYFRREISVSPLSGVTYLQETAPILLRNLLF 64

Query: 63  HLSLRQLQDPL---SYVKRWLSSLNIRSAACEVIARHIASYIMQTAGGNRDTNFHIVAEI 122
            L L++L DP+    YV + LS LN+RS   EVIA  I SY +  AGGNR+T+FH V E+
Sbjct: 65  PLRLQELHDPVFLQVYVAQLLSLLNVRSPVREVIAERIVSYTLLVAGGNRETSFHTVLEL 124

Query: 123 DHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPESVRKEKLEENENGEELGDCSIC 182
           D+IRLIT ME+   +   +S   A  EE A+ EEA P +   EK+E  ENGEE+GDCSIC
Sbjct: 125 DYIRLITWMEENHGLFQGWSNDNAAGEETAILEEARPVT---EKVE--ENGEEMGDCSIC 184

Query: 183 LDEMNCN-------CKKKEVIKIPCGHAYHHSCISKWL 209
           L+E+N N        K++EVI++ CGH YH SCI  WL
Sbjct: 185 LEELNGNGNGKGEGKKREEVIRMQCGHVYHESCIFNWL 217

[Close]

BLAST of Lcy04g004180 vs. NCBI nr
Match: KAG6595648.1 (hypothetical protein SDJN03_12201, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 176.8 bits (447), Expect = 2.1e-40
Identity = 105/218 (48.17%), Postives = 139/218 (63.76%), Query Frame = 0


Query: 3   TSSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAPPAGI--LHETPPPRLKKALF 62
           TS  I YR+Y     AS +Q +QVL+L+LRY RR +  +P +G+  L ET P  L+  LF
Sbjct: 5   TSRPIQYRIYGYTSAASGEQPYQVLQLQLRYFRREISVSPLSGVTYLQETAPILLRNLLF 64

Query: 63  HLSLRQLQDPL---SYVKRWLSSLNIRSAACEVIARHIASYIMQTAGGNRDTNFHIVAEI 122
            L L++L DP+    YV + LS LN+RS   EVIA  I SY +  AGGNR+T+FH V E+
Sbjct: 65  PLRLQELHDPVFLQVYVAQLLSLLNVRSPVREVIAERIVSYTLLVAGGNRETSFHTVLEL 124

Query: 123 DHIRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPESVRKEKLEENENGEELGDCSIC 182
           D+IR+IT ME+   +   +S   A  EE A+ EEA P +   EK+E  ENGEE+GDCSIC
Sbjct: 125 DYIRVITWMEENHGLFQGWSNDNAAGEETAILEEARPVT---EKVE--ENGEEMGDCSIC 184

Query: 183 LDEMNCN-------CKKKEVIKIPCGHAYHHSCISKWL 209
           L+E+N N        K++EVI++ CGH YH SCI  WL
Sbjct: 185 LEELNGNGNGNGEGKKREEVIRMQCGHVYHESCIFNWL 217

[Close]

BLAST of Lcy04g004180 vs. NCBI nr
Match: XP_004144954.1 (uncharacterized protein LOC101214496 [Cucumis sativus] >KGN43349.1 hypothetical protein Csa_020356 [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 5.3e-39
Identity = 104/216 (48.15%), Postives = 136/216 (62.96%), Query Frame = 0


Query: 4   SSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAP----PAGILHETPPPRLKKAL 63
           S+ I YRLY     AS    + VL++ + +I++ +  +P    P  +LH+TP      AL
Sbjct: 6   SNPIQYRLY-----ASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 65

Query: 64  FHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYIMQTAGGNRDTNFHIVAEIDH 123
           F+LSLRQLQ PL Y+ + LSSLNIR AA + +AR IAS+I+Q    N +TNFHI+AE+D 
Sbjct: 66  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 125

Query: 124 IRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPE------SVRKEKLEENENGEELGD 183
           IRLI        +P +   GGA  EE  V +EAPP         R E+L   E  EELGD
Sbjct: 126 IRLIW-------LPSM-GGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGD 185

Query: 184 CSICLDEMNCNCKKKEVIKIPCGHAYHHSCISKWLE 210
           CSICLDE+  +C+K+EV++IPCGH YH SCI KWLE
Sbjct: 186 CSICLDEL--SCEKREVMRIPCGHVYHESCIFKWLE 206

[Close]

BLAST of Lcy04g004180 vs. NCBI nr
Match: XP_011659694.1 (E3 ubiquitin-protein ligase RDUF1 [Cucumis sativus] >KGN43356.1 hypothetical protein Csa_020163 [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 5.3e-39
Identity = 104/216 (48.15%), Postives = 136/216 (62.96%), Query Frame = 0


Query: 4   SSSIHYRLYSVARPASADQSHQVLELRLRYIRRPLISAP----PAGILHETPPPRLKKAL 63
           S+ I YRLY     AS    + VL++ + +I++ +  +P    P  +LH+TP      AL
Sbjct: 6   SNPIQYRLY-----ASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 65

Query: 64  FHLSLRQLQDPLSYVKRWLSSLNIRSAACEVIARHIASYIMQTAGGNRDTNFHIVAEIDH 123
           F+LSLRQLQ PL Y+ + LSSLNIR AA + +AR IAS+I+Q    N +TNFHI+AE+D 
Sbjct: 66  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 125

Query: 124 IRLITSMEDEDPIPGLYSTGGAPVEEKAVSEEAPPE------SVRKEKLEENENGEELGD 183
           IRLI        +P +   GGA  EE  V +EAPP         R E+L   E  EELGD
Sbjct: 126 IRLIW-------LPSM-GGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGD 185

Query: 184 CSICLDEMNCNCKKKEVIKIPCGHAYHHSCISKWLE 210
           CSICLDE+  +C+K+EV++IPCGH YH SCI KWLE
Sbjct: 186 CSICLDEL--SCEKREVMRIPCGHVYHESCIFKWLE 206

The following BLAST results are available for this feature:

BLAST of Lcy04g004180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9Y7K6	5.7e-04	50.00	Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strai...	[more]

BLAST of Lcy04g004180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K696	2.6e-39	48.15	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G026750 P...	[more]
A0A0A0K2W2	2.6e-39	48.15	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G025210 P...	[more]
A0A5D3E1S5	8.2e-38	45.83	E3 ubiquitin-protein ligase RNF181-like protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S4DUZ4	8.2e-38	45.83	E3 ubiquitin-protein ligase RNF181-like OS=Cucumis melo OX=3656 GN=LOC107990564 ...	[more]
A0A6J1EKL4	1.3e-30	50.30	E3 ubiquitin-protein ligase arkadia-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Lcy04g004180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518048.1	8.7e-42	49.07	uncharacterized protein LOC111781594 [Cucurbita pepo subsp. pepo]	[more]
KAG6595650.1	9.6e-41	48.62	hypothetical protein SDJN03_12203, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6595648.1	2.1e-40	48.17	hypothetical protein SDJN03_12201, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_004144954.1	5.3e-39	48.15	uncharacterized protein LOC101214496 [Cucumis sativus] >KGN43349.1 hypothetical ...	[more]
XP_011659694.1	5.3e-39	48.15	E3 ubiquitin-protein ligase RDUF1 [Cucumis sativus] >KGN43356.1 hypothetical pro...	[more]

BLAST of Lcy04g004180 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 173..209 e-value: 3.6E-7 score: 30.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 174..207 score: 8.904299
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 139..212 e-value: 9.5E-12 score: 46.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..164
None	No IPR available	PANTHER	PTHR22765	RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING	coord: 7..209
None	No IPR available	PANTHER	PTHR22765:SF329	SUBFAMILY NOT NAMED	coord: 7..209
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 159..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g004180.1	Lcy04g004180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044267	cellular protein metabolic process
molecular_function	GO:0016740	transferase activity