Lcy04g003440 (gene) Sponge gourd (P93075) v1

Overview
NameLcy04g003440
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNA-directed DNA polymerase (reverse transcriptase)-related family protein
LocationChr04: 24991272 .. 24992663 (-)
RNA-Seq ExpressionLcy04g003440
SyntenyLcy04g003440
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTGGACAAGTCATTAATGTGGCAAAGTCGGTGATGTATTTTTCACCAAATGTTAGTACCAACGATCGTTCAATGTTTCAGTCTATCATGGGTATGCAAGTTGTGGACTCTTTAGGGACGTATCTGGGTGTTCCTTCTTCTTTTTCTAGAAATAAAAGAGAAGATTTTAGAGGGATAAAGCAACATGTCTGGCAAACTCTGCAAGGTTGGAAGGAGCGATTTTTCTCCATGGGCGGGAAAGAAGTTCTTATTAAAAGTGTAGCACAAGCCATTCCCACGTTCATGATGAGTTGCTTCCGTCTCCCTAGTACATTATGTGACGATCTACACAAAATGATTGCCAGATTTTGGTGGAGATCTACGGATTCTAAAAGGAAGATACATTGGAAAAAATGGGAATTTCTTTGTAATCCCAAAGAAGCAGGTGGTTTGAATTTCCGAGACCTAGTGAACTTTAATAAAGCGTTGTTGGCTAAACAGGTATGGCGATTATTCACTAACCCTAGTCTTCTGGCCTCAAGAGTTATCACTGCAAGGTACGCTCATGGAACTTCTTTATTTTTCGCCCCCGTTAAATCCAATTGCTCCTTTTTTTGGAGGAGTTGTGTTTGGGCTCGCGGTTTGCTCTTACAAGGAATGCGCAAACAGGTTGGTAATGGCATGAGTATAAATTTGTTCAAAGATCCTTGGATTCCCAAAGAAACTTCTTTCAAACCGTTTCCCATAAGAGTTTCTCAAGTCAATGAAGACCGAATTGTAGCTGATTTCATTACACCATCTAAAGGGTGGGATATACCAAAGCTAAGAGAACAAGTCCAGGAAGAGGATGTGAGATTAATTACTACTATCCCCATTAGCTCTATAAATGTTGAAGATAGTTGGTTTTGGCATTACTCTAAAAATGGCAACTACTCTGTCAAGAGTGGTTATAAACTTGCCATGCTATCTTCAAGATCGGGTGGCGAGTCAAGTAGGAATGCTATGAAAGTTTGGTGGCAATCGTTATGGAAGGCCAATTTGCCGGCTAAGATTAAGTTATTTATTTGGAAGGCCTATCATGAGTGCTTACCAACTAATTACTGCTTGTGGAGACGGAAAATATTAGGCCGGCCTACTTGCCCCATATGCAACTCTGAGGTTGAGACAATTGATCATGCCTTGTGCGGATGTACTCGAGCAAAGTCAATTTGTGATTGTACATTCACTCGGATTGATGTTCACATAACGGTTAGTAATAATTTTGCTGATCGTATTGTTTTCCTAGCAGCACATTTGAGTCCAAGCGAGTTCGAAAAGGCGTGCATCACTTTCTGGTCTATCTGGAATAATCGGAACTCCTTTCGCGAAGGAAAGCCAATTTTTGAGTGGCACCAACAAAGCGACTAG

mRNA sequence

ATGGCTTCTGGACAAGTCATTAATGTGGCAAAGTCGGTGATGTATTTTTCACCAAATGTTAGTACCAACGATCGTTCAATGTTTCAGTCTATCATGGGTATGCAAGTTGTGGACTCTTTAGGGACGTATCTGGGTGTTCCTTCTTCTTTTTCTAGAAATAAAAGAGAAGATTTTAGAGGGATAAAGCAACATGTCTGGCAAACTCTGCAAGGTTGGAAGGAGCGATTTTTCTCCATGGGCGGGAAAGAAGTTCTTATTAAAAGTGTAGCACAAGCCATTCCCACGTTCATGATGAGTTGCTTCCGTCTCCCTAGTACATTATGTGACGATCTACACAAAATGATTGCCAGATTTTGGTGGAGATCTACGGATTCTAAAAGGAAGATACATTGGAAAAAATGGGAATTTCTTTGTAATCCCAAAGAAGCAGGTGGTTTGAATTTCCGAGACCTAGTGAACTTTAATAAAGCGTTGTTGGCTAAACAGGTATGGCGATTATTCACTAACCCTAGTCTTCTGGCCTCAAGAGTTATCACTGCAAGGTACGCTCATGGAACTTCTTTATTTTTCGCCCCCGTTAAATCCAATTGCTCCTTTTTTTGGAGGAGTTGTGTTTGGGCTCGCGGTTTGCTCTTACAAGGAATGCGCAAACAGGTTGGTAATGGCATGAGTATAAATTTGTTCAAAGATCCTTGGATTCCCAAAGAAACTTCTTTCAAACCGTTTCCCATAAGAGTTTCTCAAGTCAATGAAGACCGAATTGTAGCTGATTTCATTACACCATCTAAAGGGTGGGATATACCAAAGCTAAGAGAACAAGTCCAGGAAGAGGATGTGAGATTAATTACTACTATCCCCATTAGCTCTATAAATGTTGAAGATAGTTGGTTTTGGCATTACTCTAAAAATGGCAACTACTCTGTCAAGAGTGGTTATAAACTTGCCATGCTATCTTCAAGATCGGGTGGCGAGTCAAGTAGGAATGCTATGAAAGTTTGGTGGCAATCGTTATGGAAGGCCAATTTGCCGGCTAAGATTAAGTTATTTATTTGGAAGGCCTATCATGAGTGCTTACCAACTAATTACTGCTTGTGGAGACGGAAAATATTAGGCCGGCCTACTTGCCCCATATGCAACTCTGAGGTTGAGACAATTGATCATGCCTTGTGCGGATGTACTCGAGCAAAGTCAATTTGTGATTGTACATTCACTCGGATTGATGTTCACATAACGGTTAGTAATAATTTTGCTGATCGTATTGTTTTCCTAGCAGCACATTTGAGTCCAAGCGAGTTCGAAAAGGCGTGCATCACTTTCTGGTCTATCTGGAATAATCGGAACTCCTTTCGCGAAGGAAAGCCAATTTTTGAGTGGCACCAACAAAGCGACTAG

Coding sequence (CDS)

ATGGCTTCTGGACAAGTCATTAATGTGGCAAAGTCGGTGATGTATTTTTCACCAAATGTTAGTACCAACGATCGTTCAATGTTTCAGTCTATCATGGGTATGCAAGTTGTGGACTCTTTAGGGACGTATCTGGGTGTTCCTTCTTCTTTTTCTAGAAATAAAAGAGAAGATTTTAGAGGGATAAAGCAACATGTCTGGCAAACTCTGCAAGGTTGGAAGGAGCGATTTTTCTCCATGGGCGGGAAAGAAGTTCTTATTAAAAGTGTAGCACAAGCCATTCCCACGTTCATGATGAGTTGCTTCCGTCTCCCTAGTACATTATGTGACGATCTACACAAAATGATTGCCAGATTTTGGTGGAGATCTACGGATTCTAAAAGGAAGATACATTGGAAAAAATGGGAATTTCTTTGTAATCCCAAAGAAGCAGGTGGTTTGAATTTCCGAGACCTAGTGAACTTTAATAAAGCGTTGTTGGCTAAACAGGTATGGCGATTATTCACTAACCCTAGTCTTCTGGCCTCAAGAGTTATCACTGCAAGGTACGCTCATGGAACTTCTTTATTTTTCGCCCCCGTTAAATCCAATTGCTCCTTTTTTTGGAGGAGTTGTGTTTGGGCTCGCGGTTTGCTCTTACAAGGAATGCGCAAACAGGTTGGTAATGGCATGAGTATAAATTTGTTCAAAGATCCTTGGATTCCCAAAGAAACTTCTTTCAAACCGTTTCCCATAAGAGTTTCTCAAGTCAATGAAGACCGAATTGTAGCTGATTTCATTACACCATCTAAAGGGTGGGATATACCAAAGCTAAGAGAACAAGTCCAGGAAGAGGATGTGAGATTAATTACTACTATCCCCATTAGCTCTATAAATGTTGAAGATAGTTGGTTTTGGCATTACTCTAAAAATGGCAACTACTCTGTCAAGAGTGGTTATAAACTTGCCATGCTATCTTCAAGATCGGGTGGCGAGTCAAGTAGGAATGCTATGAAAGTTTGGTGGCAATCGTTATGGAAGGCCAATTTGCCGGCTAAGATTAAGTTATTTATTTGGAAGGCCTATCATGAGTGCTTACCAACTAATTACTGCTTGTGGAGACGGAAAATATTAGGCCGGCCTACTTGCCCCATATGCAACTCTGAGGTTGAGACAATTGATCATGCCTTGTGCGGATGTACTCGAGCAAAGTCAATTTGTGATTGTACATTCACTCGGATTGATGTTCACATAACGGTTAGTAATAATTTTGCTGATCGTATTGTTTTCCTAGCAGCACATTTGAGTCCAAGCGAGTTCGAAAAGGCGTGCATCACTTTCTGGTCTATCTGGAATAATCGGAACTCCTTTCGCGAAGGAAAGCCAATTTTTGAGTGGCACCAACAAAGCGACTAG

Protein sequence

MASGQVINVAKSVMYFSPNVSTNDRSMFQSIMGMQVVDSLGTYLGVPSSFSRNKREDFRGIKQHVWQTLQGWKERFFSMGGKEVLIKSVAQAIPTFMMSCFRLPSTLCDDLHKMIARFWWRSTDSKRKIHWKKWEFLCNPKEAGGLNFRDLVNFNKALLAKQVWRLFTNPSLLASRVITARYAHGTSLFFAPVKSNCSFFWRSCVWARGLLLQGMRKQVGNGMSINLFKDPWIPKETSFKPFPIRVSQVNEDRIVADFITPSKGWDIPKLREQVQEEDVRLITTIPISSINVEDSWFWHYSKNGNYSVKSGYKLAMLSSRSGGESSRNAMKVWWQSLWKANLPAKIKLFIWKAYHECLPTNYCLWRRKILGRPTCPICNSEVETIDHALCGCTRAKSICDCTFTRIDVHITVSNNFADRIVFLAAHLSPSEFEKACITFWSIWNNRNSFREGKPIFEWHQQSD
Homology
BLAST of Lcy04g003440 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 6.1e-37
Identity = 99/359 (27.58%), Postives = 166/359 (46.24%), Query Frame = 0

Query: 46  VPSSFSRNKREDFRGIKQHVWQTLQGWKERFFSMGGKEVLIKSVAQAIPTFMMSCFRLPS 105
           +P    R  ++ F  I + V   + GW+E+  S  G+  L K+V  ++P   MS   LP 
Sbjct: 1   MPVLQKRINKDTFGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQ 60

Query: 106 TLCDDLHKMIARFWWRSTDSKRKIHWKKWEFLCNPKEAGGLNFRDLVNFNKALLAKQVWR 165
           ++ + L ++   F W ST  K+K H  KW  +C+PK+ GGL  R   + N+AL++K  WR
Sbjct: 61  SILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWR 120

Query: 166 LFTNPSLLASRVITARYAHG---TSLFFAPVKSNCSFFWRS-CVWARGLLLQGMRKQVGN 225
           L    + L + V+  +Y  G    S +  P K + S  WRS  +  R ++  G+    G+
Sbjct: 121 LLQEKNSLWTLVLQKKYHVGEIRDSRWLIP-KGSWSSTWRSIAIGLRDVVSHGVGWIPGD 180

Query: 226 GMSINLFKDPWIPKETSFKPFPIRVSQVNEDR-------IVADFITPSKGWDIPKLREQV 285
           G  I  + D W+    S KP    +   N +R       +  D   P +GWD  K+    
Sbjct: 181 GQQIRFWTDRWV----SGKPL---LELDNGERPTDCDTVVAKDLWIPGRGWDFAKIDPYT 240

Query: 286 QEEDVRLITTIPISSI-NVEDSWFWHYSKNGNYSVKSGYKLAMLSSRSGGESSRNAMKVW 345
                  +  + +  +    D   W +S++G +SV+S Y++  +      E  R  M  +
Sbjct: 241 TNNTRLELRAVVLDLVTGARDRLSWKFSQDGQFSVRSAYEMLTVD-----EVPRPNMASF 300

Query: 346 WQSLWKANLPAKIKLFIWKAYHECLPTNYCLWRRKILGRPTCPICNSEVETIDHALCGC 393
           +  LWK  +P ++K F+W   ++ + T     RR +     C +C   VE++ H L  C
Sbjct: 301 FNCLWKVRVPERVKTFLWLVGNQAVMTEEERHRRHLSASNVCQVCKGGVESMLHVLRDC 346

BLAST of Lcy04g003440 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.2e-29
Identity = 65/151 (43.05%), Postives = 90/151 (59.60%), Query Frame = 0

Query: 92  AIPTFMMSCFRLPSTLCDDLHKMIARFWWRSTDSKRKIHWKKWEFLCNPKE-AGGLNFRD 151
           A+P + MSCFRL   LC  L   +  FWW S ++KRKI W  W+ LC  KE  GGL FRD
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 152 LVNFNKALLAKQVWRLFTNPSLLASRVITARYAHGTSLFFAPVKSNCSFFWRSCVWARGL 211
           L  FN+ALLAKQ +R+   P  L SR++ +RY   +S+    V +  S+ WRS +  R L
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121

Query: 212 LLQGMRKQVGNGMSINLFKDPWIPKETSFKP 242
           L +G+ + +G+G+   ++ D WI  ET   P
Sbjct: 122 LSRGLLRTIGDGIHTKVWLDRWIMDETPLPP 152

BLAST of Lcy04g003440 vs. ExPASy TrEMBL
Match: A0A803Q6Z2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 1.7e-106
Identity = 192/452 (42.48%), Postives = 275/452 (60.84%), Query Frame = 0

Query: 2    ASGQVINVAKSVMYFSPNVSTNDRSMFQSIMGMQVVDSLGTYLGVPSSFSRNKREDFRGI 61
            ASGQ++N  KSV+ FSPN  T ++  FQ ++ M +      YLG+PS   R+K + F GI
Sbjct: 1446 ASGQMLNPEKSVLSFSPNTRTTEQHFFQHLLNMPIQPCHEQYLGLPSFSGRDKSQLFSGI 1505

Query: 62   KQHVWQTLQGWKERFFSMGGKEVLIKSVAQAIPTFMMSCFRLPSTLCDDLHKMIARFWWR 121
               +W+ +  W+E+ FS+GGKEVL+K+V QAIPT+ MSCF+LP  LC+ + ++++RFWW 
Sbjct: 1506 TDKIWKLMNAWREQLFSIGGKEVLLKAVVQAIPTYAMSCFQLPVKLCNQIEQLMSRFWWG 1565

Query: 122  STDSKRKIHWKKWEFLCNPKEAGGLNFRDLVNFNKALLAKQVWRLFTNPSLLASRVITAR 181
             + +   IHWK W+FLC  K  GG+ FR+ V+FN+ALLAKQ WR+  +PS L +RV+ +R
Sbjct: 1566 KSANGNAIHWKNWKFLCKSKVHGGMGFRNFVHFNQALLAKQAWRILEDPSSLIARVLKSR 1625

Query: 182  YAHGTSLFFAPVKSNCSFFWRSCVWARGLLLQGMRKQVGNGMSINLFKDPWIPKETSFKP 241
            Y        A   +  S  W+S VW + LLL+G+R ++G+G  +N    PWIP  ++FK 
Sbjct: 1626 YFATGVFLEATAGAQPSLTWKSIVWGKELLLKGLRWRIGSGADVNCVSQPWIPGPSNFK- 1685

Query: 242  FPIRVSQVNEDRIVADFITPSKGWDIPKLREQVQEEDVRLITTIPISSINVEDSWFWHYS 301
             P+     + D  VADFIT S+ WD+PKL++     DV  I +IP+S    ED   WHYS
Sbjct: 1686 -PLLFLSPDRDVKVADFITHSRQWDVPKLQQFFTPPDVDRILSIPLSLFPCEDVLLWHYS 1745

Query: 302  KNGNYSVKSGYKLAMLSSRSGGESSRNAMKVWWQSLWKANLPAKIKLFIWKAYHECLPTN 361
              G Y+VKSGYKLA     S   SS +  + WWQ  W   LP+KI++F W+AYHE LPT 
Sbjct: 1746 SAGFYTVKSGYKLASDVPDSQPNSS-HTTETWWQYFWGLKLPSKIRIFAWRAYHEALPTA 1805

Query: 362  YCLWRRKILGRPTCPICNSEVETIDHALCGCTRAKSICDCTFTRIDVHITVSNNFADRIV 421
              L  R I   P CP+C   +ETI+HA   C RAK +       I+  ++++ +F+D +V
Sbjct: 1806 AILQYRHISSSPQCPLCQVHLETINHAFFWCNRAKQVWKNWDESINWSLSMTCSFSDFLV 1865

Query: 422  FLAAHLSPSEFEKACITFWSIWNNRNSFREGK 454
            ++++ L   + E    T W IW  RN+    K
Sbjct: 1866 YVSSQLQAEKVELFLTTLWCIWTARNAETHSK 1894

BLAST of Lcy04g003440 vs. ExPASy TrEMBL
Match: A0A803PIB6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 5.4e-105
Identity = 186/448 (41.52%), Postives = 260/448 (58.04%), Query Frame = 0

Query: 2    ASGQVINVAKSVMYFSPNVSTNDRSMFQSIMGMQVVDSLGTYLGVPSSFSRNKREDFRGI 61
            ASGQ++N  KSVM FSPN     +  FQ I+GM +     +YLG+P+   R+K + F  I
Sbjct: 1183 ASGQLLNTDKSVMSFSPNTPEAVKLSFQQILGMPICACHESYLGLPAYSERDKSQLFNNI 1242

Query: 62   KQHVWQTLQGWKERFFSMGGKEVLIKSVAQAIPTFMMSCFRLPSTLCDDLHKMIARFWWR 121
            K+ +W+ +  W ++ FS+GGKEVL+K+V QAIPT+ MSCFRL +  C  +  M+ARFWW 
Sbjct: 1243 KERIWKLMHAWSDKIFSIGGKEVLLKAVVQAIPTYAMSCFRLSAKFCKQIETMMARFWWG 1302

Query: 122  STDSKRKIHWKKWEFLCNPKEAGGLNFRDLVNFNKALLAKQVWRLFTNPSLLASRVITAR 181
            S+   +KIHWK W+ LC  K  GGL FR  V+FN+A LAKQ WR+F  P+ L SRV+  R
Sbjct: 1303 SSTDNKKIHWKNWKSLCTSKRDGGLGFRSFVHFNQAFLAKQAWRIFQTPNSLLSRVLKGR 1362

Query: 182  YAHGTSLFFAPVKSNCSFFWRSCVWARGLLLQGMRKQVGNGMSINLFKDPWIPKETSFKP 241
            Y H      A V    S  W+  VW R LL +G+  ++G+G  +N   D WIP    FKP
Sbjct: 1363 YYHQNDFMTAKVSGLSSLTWQGIVWGRELLSKGLIIKIGDGTGVNCAHDSWIPGNEYFKP 1422

Query: 242  FPIRVSQVNEDRIVADFITPSKGWDIPKLREQVQEEDVRLITTIPISSINVEDSWFWHYS 301
                 S  N   +VAD+IT ++ WD+  L       D+  I TIP+S  +  D W WHY 
Sbjct: 1423 LRFTGSCSN---LVADYITDTREWDLELLHNDFSPADIDRILTIPLSYNSTRDRWRWHYD 1482

Query: 302  KNGNYSVKSGYKLAMLSSRSGGESSRNAMKVWWQSLWKANLPAKIKLFIWKAYHECLPTN 361
             +G+Y+VKSGY LA         SS  + + WWQ  W  NLP+K+++F W+  +  LP  
Sbjct: 1483 SSGDYTVKSGYNLACSLENKDHSSSSTSQEAWWQLFWGLNLPSKVRIFGWRVINSALPVA 1542

Query: 362  YCLWRRKILGRPTCPICNSEVETIDHALCGCTRAKSICDCTFTRIDVHITVSNNFADRIV 421
              L+ RK++   TC +C+   E+I HAL  C  AKS+   T  ++D          D ++
Sbjct: 1543 QNLFHRKVITSATCSLCSRAWESIGHALFSCCHAKSVWQHTSFQLDFTKASFMKDGDYLL 1602

Query: 422  FLAAHLSPSEFEKACITFWSIWNNRNSF 450
            FL+  L+ SE EK   T W IW++RN++
Sbjct: 1603 FLSTILTKSELEKLFCTMWFIWSDRNNY 1627

BLAST of Lcy04g003440 vs. ExPASy TrEMBL
Match: A0A803QGT2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 1.6e-104
Identity = 192/463 (41.47%), Postives = 264/463 (57.02%), Query Frame = 0

Query: 2    ASGQVINVAKSVMYFSPNVSTNDRSMFQSIMGMQVVDSLGTYLGVPSSFSRNKREDFRGI 61
            ASGQ +N  KSVM FSPN     ++ FQ I+GM + +    YLG+P+   R+K + F  I
Sbjct: 674  ASGQRLNADKSVMSFSPNTPIAVQNSFQQILGMPICECHEAYLGLPAYSERDKSQLFSNI 733

Query: 62   KQHVWQTLQGWKERFFSMGGKEVLIKSVAQAIPTFMMSCFRLPSTLCDDLHKMIARFWWR 121
            K+ +W+ +  W ++ FS+GGKEVL+K+V Q+IPT+ MSCFRLP  LC+++  M+A+FWW 
Sbjct: 734  KEKIWKLMHAWNDKIFSIGGKEVLLKAVVQSIPTYAMSCFRLPVKLCNEIEAMMAKFWWG 793

Query: 122  STDSKRKIHWKKWEFLCNPKEAGGLNFRDLVNFNKALLAKQVWRLFTNPSLLASRVITAR 181
            S+   +KIHWKKW FLC  K  GG+ FR  V+FN+ALLAKQ WR+F +P+ L SRV+   
Sbjct: 794  SSSDNKKIHWKKWRFLCKSKGDGGMGFRSFVHFNQALLAKQAWRIFQDPTSLLSRVLKGH 853

Query: 182  YAHGTSLFFAPVKSNCSFFWRSCVWARGLLLQGMRKQVGNGMSINLFKDPWIPKETSFKP 241
            Y        A      S  W+  VW R LL++G+R +VG G +I    D WIP    FKP
Sbjct: 854  YFSQNDFMTARGGGLSSLTWQGIVWGRELLVKGLRLKVGTGNNIRCAVDSWIPGHKGFKP 913

Query: 242  FPIRVSQVNEDRIVADFITPSKGWDIPKLREQVQEEDVRLITTIPISSINVEDSWFWHYS 301
            +    +  N    VAD+IT ++ W+I  L+      DV  I  IP+S + V D W WHY 
Sbjct: 914  YCYTGAHTNH---VADYITATREWNIECLQSDFSTPDVDNILKIPLSFLPVNDRWIWHYE 973

Query: 302  KNGNYSVKSGYKLAMLSSRSGGESSRNAMKVWWQSLWKANLPAKIKLFIWKAYHECLPTN 361
             +G+YSV SGY LA         S  +  + WW+S WK NLP+K+K+F WK     +P  
Sbjct: 974  DSGDYSVSSGYTLASSLGEEDLSSCSHTQETWWKSFWKLNLPSKVKIFGWKVIQSSIPVA 1033

Query: 362  YCLWRRKILGRPTCPICNSEVETIDHALCGCTRAKSICDCTFTRIDVHITVSNNFADRIV 421
              L+ RKIL   TC +C S  E+I HAL  C  AK +   +   ID          D ++
Sbjct: 1034 KSLYHRKILTSATCSLCQSAWESIGHALFSCCHAKEVWKFSGFSIDFTNADRLQDGDYLM 1093

Query: 422  FLAAHLSPSEFEKACITFWSIWNNRNSFREGK----PIFEWHQ 461
             L++    S FE      W IW++RN+F  GK    P+  W Q
Sbjct: 1094 HLSSIYEKSAFENILCLMWFIWSDRNNFIHGKKVKTPLQMWTQ 1133

BLAST of Lcy04g003440 vs. ExPASy TrEMBL
Match: A0A803PKJ2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 6.0e-104
Identity = 185/454 (40.75%), Postives = 258/454 (56.83%), Query Frame = 0

Query: 2   ASGQVINVAKSVMYFSPNVSTNDRSMFQSIMGMQVVDSLGTYLGVPSSFSRNKREDFRGI 61
           ASGQ++N  KSVM FSPN     +  FQ I+GM + D   TYLG+P+   R+K + F  I
Sbjct: 220 ASGQLLNTDKSVMSFSPNTPDTVKLSFQQILGMPICDCHETYLGLPAYSERDKSQLFNNI 279

Query: 62  KQHVWQTLQGWKERFFSMGGKEVLIKSVAQAIPTFMMSCFRLPSTLCDDLHKMIARFWWR 121
           K+ +W+ +  W ++ FS+GG EVL+K+V QAIPT+ MSCFRL +  C  +  M+ARFWW 
Sbjct: 280 KERIWKLMHAWNDKKFSIGGNEVLLKAVVQAIPTYAMSCFRLSTKFCKQIESMMARFWWG 339

Query: 122 STDSKRKIHWKKWEFLCNPKEAGGLNFRDLVNFNKALLAKQVWRLFTNPSLLASRVITAR 181
           S+   +KIHWK W+ LC  K  GGL FR  V+FN+A LAKQ WR+F NP  L SRV+  R
Sbjct: 340 SSTDNKKIHWKSWKSLCTSKGDGGLGFRSFVHFNQAFLAKQAWRVFQNPHSLLSRVLKGR 399

Query: 182 YAHGTSLFFAPVKSNCSFFWRSCVWARGLLLQGMRKQVGNGMSINLFKDPWIPKETSFKP 241
           Y H      A      S  W+  +W R LL QG+R ++G G +++   D WIP    FKP
Sbjct: 400 YYHHNDFLSAKASGLSSLTWQGIIWGRELLQQGLRIKIGTGTAVSCANDSWIPGHDFFKP 459

Query: 242 FPIRVSQVNEDRIVADFITPSKGWDIPKLREQVQEEDVRLITTIPISSINVEDSWFWHYS 301
           F       N    VA +IT ++ W+   L       DV  I TIP+S  ++ D W WHY 
Sbjct: 460 FQFTGPSNN---WVAQYITDAREWNWELLHRDFSPVDVEKILTIPLSYSSMTDCWIWHYD 519

Query: 302 KNGNYSVKSGYKLAMLSSRSGGESSRNAMKVWWQSLWKANLPAKIKLFIWKAYHECLPTN 361
            +G Y+VKSGY LA         SS  + + WW+  W   LP+K+++F WK  +  LP  
Sbjct: 520 CSGEYTVKSGYTLACSLENRDQTSSSGSQETWWKRFWGLTLPSKVRIFGWKVINSALPVA 579

Query: 362 YCLWRRKILGRPTCPICNSEVETIDHALCGCTRAKSICDCTFTRIDVHITVSNNFADRIV 421
             L+ +K++   TC +C+   E+I HAL  C  AK++   T   +D          D ++
Sbjct: 580 TNLFHQKVITSATCSLCSRAWESIGHALFSCCHAKAVWQNTSFHLDFQKASYMKDGDYLM 639

Query: 422 FLAAHLSPSEFEKACITFWSIWNNRNSFREGKPI 456
           FL+  L+ SE E+   T W IW++RN+F  GK +
Sbjct: 640 FLSTILTKSELERLFCTMWFIWSDRNNFIHGKQL 670

BLAST of Lcy04g003440 vs. ExPASy TrEMBL
Match: A0A803Q8J4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 1.5e-102
Identity = 186/452 (41.15%), Postives = 262/452 (57.96%), Query Frame = 0

Query: 2    ASGQVINVAKSVMYFSPNVSTNDRSMFQSIMGMQVVDSLGTYLGVPSSFSRNKREDFRGI 61
            ASGQ +N  KSVM FSPN +   +  F++I+GM + D   +YLG+P+   R+K+  F  I
Sbjct: 1155 ASGQQLNTDKSVMSFSPNTTEVAKLSFRNILGMPICDCHESYLGLPAYSERDKKNMFNHI 1214

Query: 62   KQHVWQTLQGWKERFFSMGGKEVLIKSVAQAIPTFMMSCFRLPSTLCDDLHKMIARFWWR 121
            K+ +W+ L  W ++ FS+GGKEVL+K+V Q+IPT+ MSCF+LP   C ++  M++ +WW 
Sbjct: 1215 KERIWKLLHAWTDKIFSVGGKEVLLKAVIQSIPTYAMSCFKLPVKFCREIESMMSNYWWG 1274

Query: 122  STDSKRKIHWKKWEFLCNPKEAGGLNFRDLVNFNKALLAKQVWRLFTNPSLLASRVITAR 181
            +T  K+KIHWK+W+FLC+ K  GGL FR+ ++FN+ALLAKQ WRLF N + L  RV+  R
Sbjct: 1275 TTTDKKKIHWKQWKFLCHSKMEGGLGFRNFIHFNQALLAKQAWRLFQNHNSLLFRVLKGR 1334

Query: 182  YAHGTSLFFAPVKSNCSFFWRSCVWARGLLLQGMRKQVGNGMSINLFKDPWIPKETSFKP 241
            Y        A      S  W+   W R LL +G+RK+VGNG SI+   DPWIP    F P
Sbjct: 1335 YFPRNDFLSAATCGASSLTWQGICWGRELLKKGIRKKVGNGFSISCANDPWIPGNLIFTP 1394

Query: 242  FPIRVSQVNEDRIVADFITPSKGWDIPKLREQVQEEDVRLITTIPISSINVEDSWFWHYS 301
                    N + +VAD+ITP + W+  KL       DV  I ++P+S+    D W WH  
Sbjct: 1395 I---FYSGNPNSVVADYITPDREWNFSKLSADFSSVDVGRILSLPLSNNAGPDYWIWH-G 1454

Query: 302  KNGNYSVKSGYKLAMLSSRSGGESSRNAMKVWWQSLWKANLPAKIKLFIWKAYHECLPTN 361
              G Y VKSGY  A  SS    ES  N    WW+S W+  LP K+K+F WKA H  LP  
Sbjct: 1455 TGGEYEVKSGYFFACSSSADTNESVSNPNTAWWKSFWQLKLPPKVKIFSWKAIHNALPVA 1514

Query: 362  YCLWRRKILGRPTCPICNSEVETIDHALCGCTRAKSICDCTFTRIDVHITVSNNFADRIV 421
              L+++K L   +C +C +  E++ HAL  C  A+ +        +    VS N  D + 
Sbjct: 1515 AELFKKKSLTSASCSLCLNAWESVGHALFSCKHARHVWKVAGFTFNNKAAVSMNIEDFLF 1574

Query: 422  FLAAHLSPSEFEKACITFWSIWNNRNSFREGK 454
             ++ + + SE E    T WSIW++RN+   GK
Sbjct: 1575 QISENYTKSELETIFCTMWSIWSDRNNVIHGK 1602

BLAST of Lcy04g003440 vs. NCBI nr
Match: XP_030508852.1 (uncharacterized protein LOC115723496 [Cannabis sativa])

HSP 1 Score: 398.7 bits (1023), Expect = 7.0e-107
Identity = 192/454 (42.29%), Postives = 270/454 (59.47%), Query Frame = 0

Query: 2    ASGQVINVAKSVMYFSPNVSTNDRSMFQSIMGMQVVDSLGTYLGVPSSFSRNKREDFRGI 61
            ASGQVIN  K V+ FS N   +++  F+ ++GM +      YLG+PS   +NK++ F GI
Sbjct: 722  ASGQVINPEKCVLSFSENTRQHEQIFFKDLLGMPIQPCHEQYLGLPSFSGKNKKQLFGGI 781

Query: 62   KQHVWQTLQGWKERFFSMGGKEVLIKSVAQAIPTFMMSCFRLPSTLCDDLHKMIARFWWR 121
               +W+ L  WKE  FS GGKEVL+K+V QAIPT+ MSCFRLP TLC  +  M+ARFWW 
Sbjct: 782  TDKIWKLLSSWKEHLFSAGGKEVLLKAVVQAIPTYAMSCFRLPVTLCHQIESMMARFWWG 841

Query: 122  STDSKRKIHWKKWEFLCNPKEAGGLNFRDLVNFNKALLAKQVWRLFTNPSLLASRVITAR 181
            ST + + IHWK W FLC  K  GGL FR+ ++FN+ALLAKQ WR+   P+ L S ++  R
Sbjct: 842  STATGKTIHWKNWNFLCKAKVQGGLGFRNFIHFNQALLAKQAWRILEFPNSLLSNLLRHR 901

Query: 182  YAHGTSLFFAPVKSNCSFFWRSCVWARGLLLQGMRKQVGNGMSINLFKDPWIPKETSFKP 241
            Y    +   A + SN S  WRS VW + LLL+G+R +VG+G  IN   D W+P  T+FKP
Sbjct: 902  YFSNGNYLIAGLGSNPSLTWRSLVWGKELLLKGLRWRVGSGERINCKTDSWLPGHTTFKP 961

Query: 242  FPIRVSQVNEDRIVADFITPSKGWDIPKLREQVQEEDVRLITTIPISSINVEDSWFWHYS 301
            +  +    N   +VAD IT  + WD+  L     + D+  + +IP+S    +D   W+ S
Sbjct: 962  YFFKGPDPN--LLVADLITEHRTWDMISLETNFNQADINRVLSIPLSPYPHDDVLIWNQS 1021

Query: 302  KNGNYSVKSGYKLAMLSSRSGGESSRNAMKVWWQSLWKANLPAKIKLFIWKAYHECLPTN 361
              G Y+VKSGY  A+  +     +  N+++ WW + WK  LP K+++F+WK +H  LP  
Sbjct: 1022 FTGVYNVKSGYHFAVSLAEQDDSTCSNSIEHWWSNFWKLKLPPKVRIFVWKVFHTSLPVA 1081

Query: 362  YCLWRRKILGRPTCPICNSEVETIDHALCGCTRAKSICDCTFTRIDVHITVSNNFADRIV 421
              L+RR I   P C ICNS  ET+ HAL  C RAK++ + +   ID      ++ AD ++
Sbjct: 1082 AELYRRHIAFSPYCTICNSCEETVHHALFSCPRAKAVWELSNFSIDFQTIERSSTADTLL 1141

Query: 422  FLAAHLSPSEFEKACITFWSIWNNRNSFREGKPI 456
             L+  LS SE E   +  WSIW+ RN+   G  +
Sbjct: 1142 LLSTSLSSSELELFLVLCWSIWHERNAIYHGNSV 1173

BLAST of Lcy04g003440 vs. NCBI nr
Match: XP_030509050.1 (uncharacterized protein LOC115723712 [Cannabis sativa])

HSP 1 Score: 396.4 bits (1017), Expect = 3.5e-106
Identity = 192/452 (42.48%), Postives = 275/452 (60.84%), Query Frame = 0

Query: 2    ASGQVINVAKSVMYFSPNVSTNDRSMFQSIMGMQVVDSLGTYLGVPSSFSRNKREDFRGI 61
            ASGQ++N  KSV+ FSPN  T ++  FQ ++ M +      YLG+PS   R+K + F GI
Sbjct: 722  ASGQMLNPEKSVLSFSPNTRTTEQHFFQHLLNMPIQPCHEQYLGLPSFSGRDKSQLFSGI 781

Query: 62   KQHVWQTLQGWKERFFSMGGKEVLIKSVAQAIPTFMMSCFRLPSTLCDDLHKMIARFWWR 121
               +W+ +  W+E+ FS+GGKEVL+K+V QAIPT+ MSCF+LP  LC+ + ++++RFWW 
Sbjct: 782  TDKIWKLMNAWREQLFSIGGKEVLLKAVVQAIPTYAMSCFQLPVKLCNQIEQLMSRFWWG 841

Query: 122  STDSKRKIHWKKWEFLCNPKEAGGLNFRDLVNFNKALLAKQVWRLFTNPSLLASRVITAR 181
             + +   IHWK W+FLC  K  GG+ FR+ V+FN+ALLAKQ WR+  +PS L +RV+ +R
Sbjct: 842  KSANGNAIHWKNWKFLCKSKVHGGMGFRNFVHFNQALLAKQAWRILEDPSSLIARVLKSR 901

Query: 182  YAHGTSLFFAPVKSNCSFFWRSCVWARGLLLQGMRKQVGNGMSINLFKDPWIPKETSFKP 241
            Y        A   +  S  W+S VW + LLL+G+R ++G+G  +N    PWIP  ++FK 
Sbjct: 902  YFATGVFLEATAGAQPSLTWKSIVWGKELLLKGLRWRIGSGADVNCVSQPWIPGPSNFK- 961

Query: 242  FPIRVSQVNEDRIVADFITPSKGWDIPKLREQVQEEDVRLITTIPISSINVEDSWFWHYS 301
             P+     + D  VADFIT S+ WD+PKL++     DV  I +IP+S    ED   WHYS
Sbjct: 962  -PLLFLSPDRDVKVADFITHSRQWDVPKLQQFFTPPDVDRILSIPLSLFPCEDVLLWHYS 1021

Query: 302  KNGNYSVKSGYKLAMLSSRSGGESSRNAMKVWWQSLWKANLPAKIKLFIWKAYHECLPTN 361
              G Y+VKSGYKLA     S   SS +  + WWQ  W   LP+KI++F W+AYHE LPT 
Sbjct: 1022 SAGFYTVKSGYKLASDVPDSQPNSS-HTTETWWQYFWGLKLPSKIRIFAWRAYHEALPTA 1081

Query: 362  YCLWRRKILGRPTCPICNSEVETIDHALCGCTRAKSICDCTFTRIDVHITVSNNFADRIV 421
              L  R I   P CP+C   +ETI+HA   C RAK +       I+  ++++ +F+D +V
Sbjct: 1082 AILQYRHISSSPQCPLCQVHLETINHAFFWCNRAKQVWKNWDESINWSLSMTCSFSDFLV 1141

Query: 422  FLAAHLSPSEFEKACITFWSIWNNRNSFREGK 454
            ++++ L   + E    T W IW  RN+    K
Sbjct: 1142 YVSSQLQAEKVELFLTTLWCIWTARNAETHSK 1170

BLAST of Lcy04g003440 vs. NCBI nr
Match: XP_030497600.1 (uncharacterized protein LOC115713257 [Cannabis sativa])

HSP 1 Score: 391.3 bits (1004), Expect = 1.1e-104
Identity = 186/448 (41.52%), Postives = 260/448 (58.04%), Query Frame = 0

Query: 2    ASGQVINVAKSVMYFSPNVSTNDRSMFQSIMGMQVVDSLGTYLGVPSSFSRNKREDFRGI 61
            ASGQ++N  KSVM FSPN     +  FQ I+GM +     +YLG+P+   R+K + F  I
Sbjct: 723  ASGQLLNTDKSVMSFSPNTPEAVKLSFQQILGMPICACHESYLGLPAYSERDKSQLFNNI 782

Query: 62   KQHVWQTLQGWKERFFSMGGKEVLIKSVAQAIPTFMMSCFRLPSTLCDDLHKMIARFWWR 121
            K+ +W+ +  W ++ FS+GGKEVL+K+V QAIPT+ MSCFRL +  C  +  M+ARFWW 
Sbjct: 783  KERIWKLMHAWSDKIFSIGGKEVLLKAVVQAIPTYAMSCFRLSAKFCKQIETMMARFWWG 842

Query: 122  STDSKRKIHWKKWEFLCNPKEAGGLNFRDLVNFNKALLAKQVWRLFTNPSLLASRVITAR 181
            S+   +KIHWK W+ LC  K  GGL FR  V+FN+A LAKQ WR+F  P+ L SRV+  R
Sbjct: 843  SSTDNKKIHWKNWKSLCTSKRDGGLGFRSFVHFNQAFLAKQAWRIFQTPNSLLSRVLKGR 902

Query: 182  YAHGTSLFFAPVKSNCSFFWRSCVWARGLLLQGMRKQVGNGMSINLFKDPWIPKETSFKP 241
            Y H      A V    S  W+  VW R LL +G+  ++G+G  +N   D WIP    FKP
Sbjct: 903  YYHQNDFMTAKVSGLSSLTWQGIVWGRELLSKGLIIKIGDGTGVNCAHDSWIPGNEYFKP 962

Query: 242  FPIRVSQVNEDRIVADFITPSKGWDIPKLREQVQEEDVRLITTIPISSINVEDSWFWHYS 301
                 S  N   +VAD+IT ++ WD+  L       D+  I TIP+S  +  D W WHY 
Sbjct: 963  LRFTGSCSN---LVADYITDTREWDLELLHNDFSPADIDRILTIPLSYNSTRDRWRWHYD 1022

Query: 302  KNGNYSVKSGYKLAMLSSRSGGESSRNAMKVWWQSLWKANLPAKIKLFIWKAYHECLPTN 361
             +G+Y+VKSGY LA         SS  + + WWQ  W  NLP+K+++F W+  +  LP  
Sbjct: 1023 SSGDYTVKSGYNLACSLENKDHSSSSTSQEAWWQLFWGLNLPSKVRIFGWRVINSALPVA 1082

Query: 362  YCLWRRKILGRPTCPICNSEVETIDHALCGCTRAKSICDCTFTRIDVHITVSNNFADRIV 421
              L+ RK++   TC +C+   E+I HAL  C  AKS+   T  ++D          D ++
Sbjct: 1083 QNLFHRKVITSATCSLCSRAWESIGHALFSCCHAKSVWQHTSFQLDFTKASFMKDGDYLL 1142

Query: 422  FLAAHLSPSEFEKACITFWSIWNNRNSF 450
            FL+  L+ SE EK   T W IW++RN++
Sbjct: 1143 FLSTILTKSELEKLFCTMWFIWSDRNNY 1167

BLAST of Lcy04g003440 vs. NCBI nr
Match: XP_030479133.1 (uncharacterized protein LOC115696372 [Cannabis sativa])

HSP 1 Score: 389.8 bits (1000), Expect = 3.3e-104
Identity = 192/463 (41.47%), Postives = 264/463 (57.02%), Query Frame = 0

Query: 2    ASGQVINVAKSVMYFSPNVSTNDRSMFQSIMGMQVVDSLGTYLGVPSSFSRNKREDFRGI 61
            ASGQ +N  KSVM FSPN     ++ FQ I+GM + +    YLG+P+   R+K + F  I
Sbjct: 673  ASGQRLNADKSVMSFSPNTPIAVQNSFQQILGMPICECHEAYLGLPAYSERDKSQLFSNI 732

Query: 62   KQHVWQTLQGWKERFFSMGGKEVLIKSVAQAIPTFMMSCFRLPSTLCDDLHKMIARFWWR 121
            K+ +W+ +  W ++ FS+GGKEVL+K+V Q+IPT+ MSCFRLP  LC+++  M+A+FWW 
Sbjct: 733  KEKIWKLMHAWNDKIFSIGGKEVLLKAVVQSIPTYAMSCFRLPVKLCNEIEAMMAKFWWG 792

Query: 122  STDSKRKIHWKKWEFLCNPKEAGGLNFRDLVNFNKALLAKQVWRLFTNPSLLASRVITAR 181
            S+   +KIHWKKW FLC  K  GG+ FR  V+FN+ALLAKQ WR+F +P+ L SRV+   
Sbjct: 793  SSSDNKKIHWKKWRFLCKSKGDGGMGFRSFVHFNQALLAKQAWRIFQDPTSLLSRVLKGH 852

Query: 182  YAHGTSLFFAPVKSNCSFFWRSCVWARGLLLQGMRKQVGNGMSINLFKDPWIPKETSFKP 241
            Y        A      S  W+  VW R LL++G+R +VG G +I    D WIP    FKP
Sbjct: 853  YFSQNDFMTARGGGLSSLTWQGIVWGRELLVKGLRLKVGTGNNIRCAVDSWIPGHKGFKP 912

Query: 242  FPIRVSQVNEDRIVADFITPSKGWDIPKLREQVQEEDVRLITTIPISSINVEDSWFWHYS 301
            +    +  N    VAD+IT ++ W+I  L+      DV  I  IP+S + V D W WHY 
Sbjct: 913  YCYTGAHTNH---VADYITATREWNIECLQSDFSTPDVDNILKIPLSFLPVNDRWIWHYE 972

Query: 302  KNGNYSVKSGYKLAMLSSRSGGESSRNAMKVWWQSLWKANLPAKIKLFIWKAYHECLPTN 361
             +G+YSV SGY LA         S  +  + WW+S WK NLP+K+K+F WK     +P  
Sbjct: 973  DSGDYSVSSGYTLASSLGEEDLSSCSHTQETWWKSFWKLNLPSKVKIFGWKVIQSSIPVA 1032

Query: 362  YCLWRRKILGRPTCPICNSEVETIDHALCGCTRAKSICDCTFTRIDVHITVSNNFADRIV 421
              L+ RKIL   TC +C S  E+I HAL  C  AK +   +   ID          D ++
Sbjct: 1033 KSLYHRKILTSATCSLCQSAWESIGHALFSCCHAKEVWKFSGFSIDFTNADRLQDGDYLM 1092

Query: 422  FLAAHLSPSEFEKACITFWSIWNNRNSFREGK----PIFEWHQ 461
             L++    S FE      W IW++RN+F  GK    P+  W Q
Sbjct: 1093 HLSSIYEKSAFENILCLMWFIWSDRNNFIHGKKVKTPLQMWTQ 1132

BLAST of Lcy04g003440 vs. NCBI nr
Match: XP_030502555.1 (uncharacterized protein LOC115717715 [Cannabis sativa])

HSP 1 Score: 387.5 bits (994), Expect = 1.6e-103
Identity = 186/454 (40.97%), Postives = 260/454 (57.27%), Query Frame = 0

Query: 2    ASGQVINVAKSVMYFSPNVSTNDRSMFQSIMGMQVVDSLGTYLGVPSSFSRNKREDFRGI 61
            ASGQ++N  KSVM FSPN     +  FQ I+GM + D   TYLG+P+   R+K + F  I
Sbjct: 723  ASGQLLNTDKSVMSFSPNTPDTVKLSFQQILGMPICDCHETYLGLPAYSERDKSQLFNNI 782

Query: 62   KQHVWQTLQGWKERFFSMGGKEVLIKSVAQAIPTFMMSCFRLPSTLCDDLHKMIARFWWR 121
            K+ +W+ +  W ++ FS+GGKEVL+K+V QAIPT+ MSCFRL +  C  +  M+ARFWW 
Sbjct: 783  KERIWKLMHAWNDKIFSIGGKEVLLKAVVQAIPTYAMSCFRLSTKFCKQIESMMARFWWG 842

Query: 122  STDSKRKIHWKKWEFLCNPKEAGGLNFRDLVNFNKALLAKQVWRLFTNPSLLASRVITAR 181
            S+   +KIHWK W+ LC  K  G L FR  V+FN+A LAKQ WR+F NP  L SRV+  R
Sbjct: 843  SSTDNKKIHWKGWKSLCTSKGDGRLGFRSFVHFNQAFLAKQAWRVFQNPHSLLSRVLQGR 902

Query: 182  YAHGTSLFFAPVKSNCSFFWRSCVWARGLLLQGMRKQVGNGMSINLFKDPWIPKETSFKP 241
            Y H T    A      S  W+  +W R LL QG+R ++G G +++   D WIP    FKP
Sbjct: 903  YYHHTDFLSAKASGLSSLTWQGILWGRELLQQGLRIKIGTGTTVSCANDSWIPGHDFFKP 962

Query: 242  FPIRVSQVNEDRIVADFITPSKGWDIPKLREQVQEEDVRLITTIPISSINVEDSWFWHYS 301
            F       N   +VA +IT ++ W+   L       DV  I TIP+S  ++ D W WHY 
Sbjct: 963  FRFTGPSNN---LVAHYITDAREWNWELLHRDFSPADVEKILTIPLSYNSMSDCWIWHYE 1022

Query: 302  KNGNYSVKSGYKLAMLSSRSGGESSRNAMKVWWQSLWKANLPAKIKLFIWKAYHECLPTN 361
             +G Y+VKS Y LA         SS  + + WW+  W   LP+K+++F WK  +  LP  
Sbjct: 1023 CSGEYTVKSRYTLACSLENRDQTSSSGSQETWWKRFWGLTLPSKVRIFGWKVINSALPVA 1082

Query: 362  YCLWRRKILGRPTCPICNSEVETIDHALCGCTRAKSICDCTFTRIDVHITVSNNFADRIV 421
              L+ RK++   TC +C+   E+I HAL  C  AK++   T  ++D          D ++
Sbjct: 1083 TNLFHRKVITSATCSLCSRVWESIGHALFSCCHAKAVWQNTGFQLDFQKASYMKDGDYLM 1142

Query: 422  FLAAHLSPSEFEKACITFWSIWNNRNSFREGKPI 456
            FL+  L+ SE E+   T W IW++RN+F  GK +
Sbjct: 1143 FLSTILTNSELERLFCTMWFIWSDRNNFIHGKQL 1173

BLAST of Lcy04g003440 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 197.6 bits (501), Expect = 2.2e-50
Identity = 120/376 (31.91%), Postives = 190/376 (50.53%), Query Frame = 0

Query: 92  AIPTFMMSCFRLPSTLCDDLHKMIARFWWRSTDSKRKIHWKKWEFLCNPKEAGGLNFRDL 151
           A+PT+ M+CF LP T+C  +  ++A FWWR+    + +HWK W+ L   K  GG+ F+D+
Sbjct: 2   ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61

Query: 152 VNFNKALLAKQVWRLFTNPSLLASRVITARYAHGTSLFFAPVKSNCSFFWRSCVWARGLL 211
             FN ALL KQ+WR+ + P  L ++V  +RY H +    AP+ S  SF W+S   ++ +L
Sbjct: 62  EAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEIL 121

Query: 212 LQGMRKQVGNGMSINLFKDPWIPKETSFKPF------PIRVSQVNEDRIVADFITPS-KG 271
            QG R  VGNG  I +++  W+  + +          P   + V+    V+D I  S + 
Sbjct: 122 RQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGRE 181

Query: 272 WDIPKLREQVQEEDVRLITTIPISSINVEDSWFWHYSKNGNYSVKSGYKL--AMLSSRSG 331
           W    +     E + +LI  +      + DS+ W Y+ +G+Y+VKSGY +   +++ RS 
Sbjct: 182 WRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRSS 241

Query: 332 -GESSRNAMKVWWQSLWKANLPAKIKLFIWKAYHECLPTNYCLWRRKILGRPTCPICNSE 391
             E S  ++   +Q +WK+    KI+ F+WK     LP    L  R +     C  C S 
Sbjct: 242 PQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSC 301

Query: 392 VETIDHALCGCTRAKSICDCTFTRIDVHITVSNNFADRI------VFLAAHLSPSEFEKA 448
            ET++H L  CT A+     T+    + I +   +AD I      VF   + +P ++EKA
Sbjct: 302 KETVNHLLFKCTFAR----LTWAISSIPIPLGGEWADSIYVNLYWVFNLGNGNP-QWEKA 361

BLAST of Lcy04g003440 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 132.5 bits (332), Expect = 8.7e-31
Identity = 65/151 (43.05%), Postives = 90/151 (59.60%), Query Frame = 0

Query: 92  AIPTFMMSCFRLPSTLCDDLHKMIARFWWRSTDSKRKIHWKKWEFLCNPKE-AGGLNFRD 151
           A+P + MSCFRL   LC  L   +  FWW S ++KRKI W  W+ LC  KE  GGL FRD
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 152 LVNFNKALLAKQVWRLFTNPSLLASRVITARYAHGTSLFFAPVKSNCSFFWRSCVWARGL 211
           L  FN+ALLAKQ +R+   P  L SR++ +RY   +S+    V +  S+ WRS +  R L
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121

Query: 212 LLQGMRKQVGNGMSINLFKDPWIPKETSFKP 242
           L +G+ + +G+G+   ++ D WI  ET   P
Sbjct: 122 LSRGLLRTIGDGIHTKVWLDRWIMDETPLPP 152

BLAST of Lcy04g003440 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 97.1 bits (240), Expect = 4.1e-20
Identity = 77/283 (27.21%), Postives = 128/283 (45.23%), Query Frame = 0

Query: 180 ARYAHGTSLFFAPVKSNCSFFWRSCVWARGLLLQGMRKQVGNGMSINLFKDPWIPKETSF 239
           ARY    S+  A V+   S+ W S +    LL +G R  +G+G +I +  D  +    S 
Sbjct: 3   ARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIV---DSH 62

Query: 240 KPFPIRVSQVNEDRIVADFITPSKG----WDIPKLREQVQEEDVRLITTIPISSINVEDS 299
            P P+   +  ++  + + +   KG    WD  K+ + V + D   I  I ++     D 
Sbjct: 63  PPRPLNTEETYKEMTINN-LFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDK 122

Query: 300 WFWHYSKNGNYSVKSGYKLAM--LSSRSGGESSRNAMKVWWQSLWKANLPAKIKLFIWKA 359
             W+Y+  G Y+V+SGY L     S+     +  +        +W   +  K+K F+W+A
Sbjct: 123 IIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRA 182

Query: 360 YHECLPTNYCLWRRKILGRPTCPICNSEVETIDHALCGC---TRAKSICDCTFTRIDVHI 419
             + L T   L  R +   P+CP C+ E E+I+HAL  C   T A  + D +  R  +  
Sbjct: 183 LSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLIRNQL-- 242

Query: 420 TVSNNFAD---RIVFLAAHLSPSEFEKACITF--WSIWNNRNS 449
            +SN+F +    I+      + S+F K    +  W IW  RN+
Sbjct: 243 -MSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNN 278

BLAST of Lcy04g003440 vs. TAIR 10
Match: AT3G25720.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 54.3 bits (129), Expect = 3.0e-07
Identity = 44/147 (29.93%), Postives = 61/147 (41.50%), Query Frame = 0

Query: 137 LCNPKEAGGLNFRDLVNFNKALLAKQVWRLFTNPSLLASRVITARYAHGTSLFFAPVKS- 196
           +C PK  GGL  R    +N  L  K VWRLF+    L   V   RY H   L  A V   
Sbjct: 18  VCLPKAEGGLGLRWFSEWNTTLNLKLVWRLFSGGGSL--WVDWHRYHHLQGLGDASVSKF 77

Query: 197 -------NCSFFWRSCVWARGLLLQGMRKQVGNGMSINLFKDPWIPKETSFKPFPIRVSQ 256
                  + S+ W+  +  R L  + +R  +GNG++   + D W P    F P  I +  
Sbjct: 78  WTSQELVSDSWNWKCLLRLRPLAERFLRCNIGNGLTARFWTDNWTP----FGPLLIHIGA 137

Query: 257 VNEDRI-------VADFITPSKGWDIP 269
              +R+       VAD  T    W +P
Sbjct: 138 ARPNRLRIPIEASVAD-ATQGISWGLP 157

BLAST of Lcy04g003440 vs. TAIR 10
Match: AT2G22440.1 (BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1); Has 208 Blast hits to 191 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.0 bits (123), Expect = 1.5e-06
Identity = 32/99 (32.32%), Postives = 52/99 (52.53%), Query Frame = 0

Query: 223 MSINLFKDPWIPKETSFKPFPIRVSQVNEDRIVADFITPSKG-WDIPKLREQVQEEDVRL 282
           M   ++KDPWIP   + +P    ++  +    V D I  +   W + +L+  +   D+ L
Sbjct: 1   MLTRVWKDPWIPTILA-RPAKSILNIRDSLLYVNDLIDQNTNLWKLDRLQALIDPVDIPL 60

Query: 283 ITTIPISSINVEDSWFWHYSKNGNYSVKSGYKLAMLSSR 321
           I  I  S   + D + W ++K+GNY+VKSGY +A   SR
Sbjct: 61  ILGIRPSRTYLSDGFSWSHTKSGNYTVKSGYWVARDLSR 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P0C2F66.1e-3727.58Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
P932951.2e-2943.05Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A803Q6Z21.7e-10642.48Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803PIB65.4e-10541.52Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803QGT21.6e-10441.47Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803PKJ26.0e-10440.75Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803Q8J41.5e-10241.15Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_030508852.17.0e-10742.29uncharacterized protein LOC115723496 [Cannabis sativa][more]
XP_030509050.13.5e-10642.48uncharacterized protein LOC115723712 [Cannabis sativa][more]
XP_030497600.11.1e-10441.52uncharacterized protein LOC115713257 [Cannabis sativa][more]
XP_030479133.13.3e-10441.47uncharacterized protein LOC115696372 [Cannabis sativa][more]
XP_030502555.11.6e-10340.97uncharacterized protein LOC115717715 [Cannabis sativa][more]
Match NameE-valueIdentityDescription
AT4G29090.12.2e-5031.91Ribonuclease H-like superfamily protein [more]
ATMG00310.18.7e-3143.05RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT3G09510.14.1e-2027.21Ribonuclease H-like superfamily protein [more]
AT3G25720.13.0e-0729.93RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT2G22440.11.5e-0632.32BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily prot... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 306..397
e-value: 5.8E-18
score: 65.4
NoneNo IPR availablePANTHERPTHR33116:SF45SUBFAMILY NOT NAMEDcoord: 2..350
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 2..350

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy04g003440.1Lcy04g003440.1mRNA