Lcy04g002680 (gene) Sponge gourd (P93075) v1

Overview
NameLcy04g002680
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRhodanese domain-containing protein
LocationChr04: 20863503 .. 20873081 (+)
RNA-Seq ExpressionLcy04g002680
SyntenyLcy04g002680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGACAGAGAAGCTGAAGAAGCGATTATTTCAGCGTCGGCATCTCATACAATGGGAGGAATCGGCCCTTGCTGTTCAACTCTTCCTTCCAGAAGGTGAACCTTCTTTCCTCATCTTTTAAACCCTTCAATCAAATTGTTCCCAATTCGACTTCCTTTTCTTTGTCATTTGTTCTTACCATTCTGACTTTTGGGTTTCTCTGTTTATATGATTTTGGTATTTTAAGAGGAATATAAGTGAAATGGGAGTCCACTAATTTTGAAAACTGCTTTTAACTGAACTACTTACGGAAGAATATGAGTTAAATGCTTCATCCAAAATTCAACACTTCAAAAACATGTCAAATACACACTCTATCACTCTATTTTAAAAAGATTTTAACAGGCCCTTGCACATTCAATTTTGTCTTTTTTTTTTTAATTGAATTTTCTTACTTTGCTGTAGGAAAGAAGATCATTTCATAACTCCTAACTTATGTAGAATCATTAAACCCCACATTTCTGTTGATGAGCTAATGGAGTACTAAGAAAATCTGTTTATATTCCTAATCTTTCTTTCTCAAATAGTCAAATGTGTGGATTTATTTTACCAACTCTAGAATTGAGTTTGGTGGTTGCTAATATTCCATGTTCTTAAAAAGTGTGTGGTTTATGGTCTTGTAATTTTTCAAATGTTTGTTGAACTCCCTTTGAGAGATTTAAAGCAATCTCTCTGCATTCTTGTTGTGCTGATATATTCTAAGTGAAGCTGAAGCCTTAACTATTTTGAATTCAAAGATGATTATTTTATGGGAAATGAAAACAATTTACACTCTCTTTTGTTCGTATGAAATAAAGGGATTAAGTATGTGTTTCCTCCAGCAACCTAAGGACGTCCTGGTTTGATTTAAGGACTGTTGCTCATAGAAGAACATATCCGGGGAAACAAGTTCTTCAGAGAAAAGTTGGAATTAGAGCTGAAGTAAATTTTGTCAATGTTGAAGAAGCCAAGAAACTAATTGCTGTTGATGGATATGCAATCGTTGATGTTCGGGACAAATCGCAGTTCGATCGAGCTCATATTAAATCATGTTACCATGTCCCACTTTTCATTGAAAACCAAGACAATGACCTCGGTAAAACCTTTTCCTTTCCCTATCTATTTTTGATATTAGGTGTGTTTGGGAGTGCATTTGAAATAAGTGGTTTTAGCAAAGTACTTCAATTATAGCTACTTAAGTAAACAATGATTCTATAGGAGTGTTTTCTCGCCTCATATTTTTCAAGTACCTTTCAGACTTTTTGCAGAAGTACTTTTACATTATTCGGTGATTTTGAGTGGGAGTACTTCCAGCTATGGCCTAAGAAGCACGGACACTTTAGTTTGGCTAGTGTATCCGTGTCCGACACGTGTCGGACACTTGGACACTCCGACAGTTGTTGGACACGTATCGGAAACTTGTTAGCACAATTGATATGTGGCAAACACTAGTCGTAGGTTCATTTCAAACCCTTGTTAAGTATACTAAATAGACACAATGCTTAAATGACAAAAATAATAAAATTTAAGAGTAAAATACATTAAATTCATTTTTTCAAACATACAAATGCCTTAACTTATTGATTTTGAATTTCCTTCTTGTATAAAAACCCTAAAAGTGTCCTTTCCGTGTCCGTGTCCTAGATTTAAAAAAAATGACGTGTCACCGTGTCCATGTCGTGTTGTATTTGTGTCTCCTGTCCGTATCCATGCTTCTTAGGCTATGGCAAAACGACTCTCACAAATTGGACTGTATTAAATTGAAATGTTGTGTGTGATGTGCAGGAACTATTATAAAGAGGACAGTGCACAACAATTTTTCTGGTCTCTTCTTTGGATTGCCATTTACCAAACCCAACCCTGAGTTTGTGCAGTCTGTTAAGGCCCAGTTTTCACCTCAAAGCAAGCTATTGCTTGTTTGTCAGGAAGGATTAAGGTAACTTTTCTGTCAATATAAGCTTTGTAATGCTGAATTATGAAGTGTGTTTTTTCCTGTTGTTAAAATGCATGGCATATGAACCTGCTTGGTCAATTAAGCTATGTTCAAGTCAGCGATAAATTATTTTTTGGAACATTGGATCTTGAGTTCTAGCTTGCTATGTTGAAAACTTAACGTAAAATCTCGTTGTCTCTCGAAGTTGGGCCTCGTGGTCTAATGTTGAGTGCAATTGAATAAACGGAACAAGTTCAAGTCATGGTAGCCTACCTAGGACTTGATATCTTAGAGTTAGGTGGTTGTTGTAGACCGAAAGGTTGAACCACTATATTTCTTGGTGTTCTTTTCTTTTTTGCTTAATTATTTGCTGCTGGAAACTTGCATTCTGATTGGGCATTATAAGTTCGCTTAAAATTCTACAAGTGGTATCAGAGCCATGCCCCGGGTGTAGCCGTGTCGGGTGGAATCCTCGGGTGCCGAACAAAGAAGTTGTGAGCCTTGAAGTAGTCATGGGGAGATCCGTGGTTGAGCTCTGGGCAGGCGGGTATACTCCGGAGAAGAGGAGTCATCCTGGATAAGAGCAAACTCTCGGTAAAGCGGTGAAGTGGGCCCATCGCCTAGAGAGTTGGACGGACTCTTGGTAAAGGAGAGTTTCGAGTTGGACGGATAGATAGATGCATGACTAGTTGAGGGGAGGCTCGGTGGTACTTTGTTCGAGGGGAGGATTGTTGGGAGCTAGATGAGGGGAAGATCATGGGTATATAAGGGAGGACAAGTATCTCCATTGGTATGAGGCCTTTTGGGGTAATCCAAAAGCAAGACCATGAGGGCTTATGCCCAAAGTGGACAATATCATACCATTGTGGAGATATGTGTGTGTCCGATTGTCCCTTACAAGTGGTATCAGAGCTCCGTTCGATCCAAATTTTGGAGGTTCGTGGTTTAGTGCCTTTGGTGTTTCTATTCTTTGTTCAGGTTATTCTGTGAGTTATACATTGACTAATGTCTTCAATGTCGACTCGTTTCGAGGTTGCTCGATTTGATGGGAAGGGTGATTTCGGTCTATGGAGAAAGAAGATTAAAGCTCTTTTGGTGCAACAAAAAGTAGCTAAAATCTTGTGTGACGAAAAGGACCTTCCGGCGACACTCACAGAAGATGATAAGAAGGAAATGGATGAGATTGCCTATTCGACGATTATACTTTATCTCTCAGATGGAGTGCTTAGGCAAGTGAATGAGGTTACTACCACGGTTGAGTTATGGAAGAAGCTGGAGAGCCTTTATTTGACAAAGTCTCTACCAAACAAGTTATATCTAAAGGAGAAATTCTTTGGATATAAGATGGATCAAAGTAAAGGCTTGGAAGAGAACTTGGATGAATTTCAAAAGATTGTAGTTGATCTCAATAACATCGGTGAGAAGATGTCGGATGAGAATCAAGCTGTGATACTTTTGAATTCTTTGCCGGATTCGTTTCGAGAGGTAAAGGCTGCAATTAAATATGGTAGGGATTCGCTAACCATGGATATTGTGTTGGATGCCTTGAAGACTAGAAATCTCGAAATTAAAAAGGAACGCAGGGAAGGTGAGTTACTTATAGCCAGAGGGAGAGCTGAGAAAGAGAATTGGAAAGGAAAGGATTCGAGAACCAGGTCCAAGTCCAGAGGAAAAGGGAAAAAGTGTTACTTGTGTCATAAGGATGGGCATTTTAAGAAAAATTGTCCATTGAACAAGAACAAGGAAGTCTCTGATGGTAAGAGAGGTGAATCGAGTTCAGCCAATGTGACTGATGGGTATGATTCAGCAGAGGTCTTGATGGTATCCAGTAGAGATTTTCAAGATGAGTGGATCATGGATTCAGGTTGCACATTCCACATGACTCCCAATCGAGAATATTTGATTGACTTTCAGGAAGCAAGTGGTGGAAAAGTCTTGCTCGGAGATAATGGTGTCTGCAATGTGAAAGGAACTGGGTCAGTTCGGCTTTCAACACATGATGGGATGTTAGAATGCTTACAAATGTAAGGTATGTTCCAGAACTTAAACGAAATCTAATTTCTCTAGGTGAATTAGATAGATCAGGTTATTGCTATAAATTTGAAAATGGAGTTCTGAAGGTTTCTAAGGGTTCTTTGGTGAAGTTAAAGGGATCCTTGAAGAATGGTCTTTATGTGTTGGAAGGGACCGCTATTGCAGGAAGCGTGGATGTTGCATCTGGAAGAGGAACTGATATGTCTATGCTATGGCATAGAAGGTTGGCACATGTGAGTGAAAGAGGTCTACAAGCTCTTTCTAAACAAGGCTTACTTGGAGGTATTAAAGAGATTGAACTCCCATTTTGTGACCATTGCATAATGGGAAAGTCTACTAGGGTGAAATTCAGAAAAGGAAAGCATTCAACGAAAGGCATATTAGATTATGTGCACTCAGATTTGTGGGGTCCGGCGAAGGTACCTACTATGGGAGGTTCGAGGTACTTCATGTCAATAATTGATGATTTTTCAAGGAAAGTGTGGATTTATCTACTTAAACAAAAGGATGAAGCTTTTGAGAAATTCCTTGAATGGAAGAAGCAGACTGAGAACCAAACAGGGAGAAAGGTAAAGTACTTGAGGACAGATAATGGTTTAGAATTTGTAAATCACAAATTCAACAAACTTTGCAAGTCTGAGGGAATCACGAGGCACCTTACTGTTACATACACTCCTCAGCAGAATGGTTTAGCTGAGAGGTTCAATAGAACAATAATGGAGCGTACTAGGTGTCTCCTGTCAAATGCTTCACTACCTCAGAAGTTTTGGGGCGAAGCTGCCCAAACCGCCTGTTATCTCATTAACAGGAGTCCGTTTTCCGCTATAGATTTCAAGACTCCTCAAGAGATATGGAAAGGTGAAGCTCCAAGTCTTGAACATCTCAGGGTATTTGGTTGTTTAGCTTATGCTCATGTTAAGGAAGGAAAGCTAAACAAGAGAGCATTGAAATGTATGTTTATTGGCTACCCTCAAGGTGTCAAAGGATATAAGCTTTGGTGCTTGGAAGAAGGTAGAAATAAATGTATAATCAGCAGAGATGTCACTTTCAATGAAGATGAGATGCCGTTTTGTATTAAGAGCCAGCCAGAACAGCGATCAGTTGAGAATGTTAGAACAGAAGTCAGAATTGAGTCTGAAAAACAACCATCAGCTGCCAGGGGTGAATCTAGTGATGGGTCACAGTTGGGTTAACAAGCAGAGTCCTCGCAGCGGTCTGAATCTGATGGTATACAGTTTCAACGGGAGAGAACTTTGATTGATGAGGGAGCTTCCACTGAGGAAAGTTCAGATAACAATGACTTGCAGAATTATCAGCTTGCACGTGATAGATCTCAGAGAGTTAGACAGGCACCTACGAGGTATGGTTTTGCTGACTTAGTTGCATTTGCTCTGAATTGTGCTTCTGATAATATTGAGGTAGAGCCTATTACATTCGAAGAGGCTATTGAGTCTGGGTTAAAGGAACAGTGGAAAGCTGCAATGGAAGAAGAGTTGTCCTCTTTGCATAAGAATCAGACGTGGTCATTGGTTCCAAAGCCTCCTAAACAGAAACTCATTCAATCAAAGTGGATTTATAAAATCAAGCCAGGTACAGGAGGTAACAGCAAGCCTAGGTATAAAGCTAGGCTAGTAGCCAAGGGCTACACTCAAAAGGAGGGAGTTGATTATAATGAGATTTTCTCTCCGGTGGTAAGACATTCATCTATTCGTTTAGTTTTGTCTATTGTTGTTCACTTTGATATGTTTCTTGAACAGATGGATGTCACTACAGCATTCCTTCATGGAGAATTGGAGGAGGTAATTTACATGGCTCAGCCAAAGGGCTATGAGGTGAAGGGAAAGGAAGATATGGTTTGTCTCCTTCACAAGTCCATTTATGGACTGAAGCAATTGCCAAGACAGTGGTATATTCGCTTTGATACCTTTATCTTGAAGCAGGGGTTTCGCAGGAGCTCATATGATGCATGCGTTTATTGGAAACTATCTCTGAAAGGTACATATATTTATCTACTGCTTTATGTAGATGATATGATACTTGTGTCTAAGGATTATGCTGAAATCTGTGAACTCAAGAAACAGTTGAGTAGTGAGTTTGAAATGAAAGATTTAGGTGCATTGAAAAGAATCTTAGGCATGGATGTTAAGAGAGATAGGGAGAAAGGTTTGTTAACCATTTCGCAGGAGAGCTATGTGCATAAACTGCTTGAGAAGTATAACATGTCTGATTGTAAGTCAGTTTCGACACCTTTAGCATCTCATTTTAGGCTTTCTTCGTCTCAGTCACCTAAAACTGATCAGGAAAGGTTAGAGATGTCAAAAATTCCATATTGTAATGCCGTAGGGAGCATTATGTATCTCATGATTTGTACTAGGCCTGACTTGGGTTACTCAATGAGCATGATAAGTAGGTTTATGTCAAATCCTGGAAAGGAGCATTGGAATGCAGTTAAATGGGTGCTTCGATATTTGAAAGGTACATCAGGTGTTTCACTGTGTTTTGGGAATGGTTGTGATCAATCAGCATTGCTGGAAGGCTTCACAGATGCAGATTATGCTGCAGACCTTGACAAAAGGTCTTTATCAGGTCACATTTTTCGCTTGTATGGTAATGTGGTCAGTTGGAAGGTTTCTCTACAGCCAGTAGTTGCTTTGTCAACTACTGAATCAGAGTATATTTCAGTTGGTGAAGCAGTTAAGGAAGCAGTGTGGTTGATGAGAATTGTTGGTGAGTTGCTGACACAAGAGTTTATTCCTGTCATCCGTTGTGATAGCCAGAGTGCTATTCATCTTGCGAAGAATCCATCTCACCATGAACGGTCTAAGCATATTGATGTTAAGTTTCACTTTATAAGGGATATGGTTTCTCAAAATGAAGTCAAACTGGTGAAAGTTCATACTGATCAGAATTTGTCGGATATGCTTACGAAGGTTCTCACAGCTCATAGGTTTAAATACCTGTTAAATGAGCTGAATGTAAAGCCAGGGTGATAGGGAAATTAGAGAACCAGCTGATTGCTTAAGATATTCTTGTCATGAGGGAGATTTGTAAAAATGACAAGGTTATCTTAAGGTTAAATGGTTAAAGGGCAATTTTGTAATATTCAATGTACAGAGGGGCAAGATAGTAATTATGCCTTCATTTTTCCCTTTAGGGCTGTGGTTCACGATAGAATACAGAAGAGAGAGAGAGGAAAATATACAGAGAAACAGAGAGGAAGAAAACAAGCAGCCGCCGGTGTCGTTGTCTCCGTTTAGCGTCGTGGGCATTCATTCTCGGTCGGTCTGGGTCACGGTATCTCACCGGAGTTGAACCTTGTAGCAGTGTCGCTGTGGGTTCTCGGTTTTGAAGACTAAATCGCCGTGGGTAGCGCCGGTTTGTGTGGGTCTCGGTTCTGAGATCGGTTTTCTTCGTCGGAGTGTCGCCGTGGGTACAGCTGTGTGAGACTGGTAGCGCTGGTGTGAGTCTCGGTTAGAGCAAGCGTGGGTCTTGGTCGTTGTGACTGTTTCGGCGTGGTGATTTCTCCGTAGGTACTCTCTTGTGAACTCAAATCCATTGAGGTTTGAGGTATATTTACATTGGGTAAATTTGTGCCATTGATGTACTCTGTATTGGTGACTTGTTGCTCTTAATAAAACACTTATAAGCTGGTTCTCAAAGTGGATGTAGACCGAAAGGTTGAACCACTATATTTCTTGGTGTTCTTTTCTTTTTTGCTTAATTATTTGCTGCTGGAAACTTGCATTCTGATTGGGCATTATAAGTTCGCTTAACACACATATCTCCACAATGGTATGATATTGTCCACTTTGGGCATAAGCCCTCATGGTTTTGCTTTTGGATTACCCCAAAAGGCCTCATACCAATGGAGATACTTGTCCTCCCTTATAGTTGTCCGGTGAGAATAATCGAAGTGCACACAAGTTGGTCCAGATACTCACGGATATATAAGTAATGATAATTTGTTTGGTTTGGATTGGTAATTAGGTCCACTGCTGCTGCAGACAAGTTAGAGAAAGCTGGTTTTGAAAACATAGCATGTATAACATCAGGACTCCAATCTGTAAAACCAGGTGGAATTTCAATCCTTAGTCCAACTAGTTTTATATTAAATTCCAATTTTTGAACACAAATTTGGTTTTTGTAAGGTACAACAGGCACATTTGACTCTGTTGGTCCTACTGAGTTACAAGATGCTGGGAAAGCTGGTTTGGTGACGATCCAAGGCAAAATTTCGGCTGTACTTGGAACTGTTCTTATCTGTAAGCTTTCTCAACTCTATACCATCCTATTTTTCAGGAAAATTTTAACGTAGTCCCTAGTGTTGGTGTGTTTTTTGGATTTAGTCCATATTGTTTAAACAGTTTCAATTTAGTCCCTTATGCATTAACTTTTTCAATTCTTTTTTTTCGGGACAACTGCCTGACCCTACTACATTTGGTTGCCAAGAAAACTCGTAGGATATTAAATATCCTAGGTAGGTGGCCACCATGGATTGAACTCATTCCCTCTAAGCCCTTTATTTTTTCTATGGCCCTTATTGACCATTAGGACCAACCCATGATGGTTAGAAGAGAATATAGATAATCTAAGAGAAGAAAACTTGAAAGTTTTACTGATGTTTTAGAAACTTAGAAGAACTAAAACTTTCCTCAGGAATTTTTTTCTCCTCTTAATGCCTGTCAATTCATTAGGTATTATATGTCGTGTAAGTTTATCATCAACCAATCTTAAACTATAACAATGAGAAACTAAATTAAAACTTTTTAAACTACAGGGACTACGTTGAAAGATACTCCTACATTATGGACAAATATATATTTATCATGAACATTTTTATAGAAAATAATTATAAATACAATTTTTAAAAAATAATTTGAAATATATATTTTGAAAAATTAATTAATCATTTGACTAATTATAGATATATATATATATATATATATATTCTGGTATGACACTCTAATTGTGACTAAGGAAAAAAATAATGTAATGTTATTACTTGAGCTTTGAGGTATCTTTTGAGTTGTCTTATGGTTTTCTCTCCATGTAAATCTTTGATGTATCTATTTTCTAATCTTCTTGTGATTTTAGTGATTGAATAATGTTCAGTTGACTACACATTAAAGTTATAAAGTTATATAGTTTGTATACTGACAATTATTTGAATGAATTTGGTAGGTGCATATTTGTTCATAACTTTCTTTCCAGAACAGGCTGAGAAGCTGCTTCAAATGGCACCAGCTAGTTAAACCATTGTCTCAACATAAACCCTTTAATTTAATTTAACTTGTAGCCCCATATTTGGTCATGGCCCTTTTTTTATTTAGGCATTATCATCTCTCTCTTCCAAGTGCATATATTTTCATACACCCTTCCCTTATCATTTCGTGAACATGAATATAGCTTAATTTGTTAGACATCAATGGCTCCCTCTATGGATCGTAGATTTTAATCTCCTCCCTTAATATAGTTTTTGTAGTTCAACAATTTCAAGAGTGGGGATCGAACCATCGAGTTTTAAAGTGATAATTGATGTCTTATCTATTGAGTTATGCTTGTATTGATTCCTTAATTTTCAATAGAACATTCTAA

mRNA sequence

GGGACAGAGAAGCTGAAGAAGCGATTATTTCAGCGTCGGCATCTCATACAATGGGAGGAATCGGCCCTTGCTGTTCAACTCTTCCTTCCAGAAGCAACCTAAGGACGTCCTGGTTTGATTTAAGGACTGTTGCTCATAGAAGAACATATCCGGGGAAACAAGTTCTTCAGAGAAAAGTTGGAATTAGAGCTGAAGTAAATTTTGTCAATGTTGAAGAAGCCAAGAAACTAATTGCTGTTGATGGATATGCAATCGTTGATGTTCGGGACAAATCGCAGTTCGATCGAGCTCATATTAAATCATGTTACCATGTCCCACTTTTCATTGAAAACCAAGACAATGACCTCGGAACTATTATAAAGAGGACAGTGCACAACAATTTTTCTGGTCTCTTCTTTGGATTGCCATTTACCAAACCCAACCCTGAGTTTGTGCAGTCTGTTAAGGCCCAGTTTTCACCTCAAAGCAAGCTATTGCTTGTTTGTCAGGAAGGATTAAGGTCCACTGCTGCTGCAGACAAGTTAGAGAAAGCTGGTTTTGAAAACATAGCATGTATAACATCAGGACTCCAATCTGTAAAACCAGGCACATTTGACTCTGTTGGTCCTACTGAGTTACAAGATGCTGGGAAAGCTGGTTTGGTGACGATCCAAGGCAAAATTTCGGCTGTACTTGGAACTGTTCTTATCTGTGCATATTTGTTCATAACTTTCTTTCCAGAACAGGCTGAGAAGCTGCTTCAAATGGCACCAGCTAGTTAAACCATTGTCTCAACATAAACCCTTTAATTTAATTTAACTTGTAGCCCCATATTTGGTCATGGCCCTTTTTTTATTTAGGCATTATCATCTCTCTCTTCCAAGTGCATATATTTTCATACACCCTTCCCTTATCATTTCGTGAACATGAATATAGCTTAATTTGTTAGACATCAATGGCTCCCTCTATGGATCGTAGATTTTAATCTCCTCCCTTAATATAGTTTTTGTAGTTCAACAATTTCAAGAGTGGGGATCGAACCATCGAGTTTTAAAGTGATAATTGATGTCTTATCTATTGAGTTATGCTTGTATTGATTCCTTAATTTTCAATAGAACATTCTAA

Coding sequence (CDS)

ATGGGAGGAATCGGCCCTTGCTGTTCAACTCTTCCTTCCAGAAGCAACCTAAGGACGTCCTGGTTTGATTTAAGGACTGTTGCTCATAGAAGAACATATCCGGGGAAACAAGTTCTTCAGAGAAAAGTTGGAATTAGAGCTGAAGTAAATTTTGTCAATGTTGAAGAAGCCAAGAAACTAATTGCTGTTGATGGATATGCAATCGTTGATGTTCGGGACAAATCGCAGTTCGATCGAGCTCATATTAAATCATGTTACCATGTCCCACTTTTCATTGAAAACCAAGACAATGACCTCGGAACTATTATAAAGAGGACAGTGCACAACAATTTTTCTGGTCTCTTCTTTGGATTGCCATTTACCAAACCCAACCCTGAGTTTGTGCAGTCTGTTAAGGCCCAGTTTTCACCTCAAAGCAAGCTATTGCTTGTTTGTCAGGAAGGATTAAGGTCCACTGCTGCTGCAGACAAGTTAGAGAAAGCTGGTTTTGAAAACATAGCATGTATAACATCAGGACTCCAATCTGTAAAACCAGGCACATTTGACTCTGTTGGTCCTACTGAGTTACAAGATGCTGGGAAAGCTGGTTTGGTGACGATCCAAGGCAAAATTTCGGCTGTACTTGGAACTGTTCTTATCTGTGCATATTTGTTCATAACTTTCTTTCCAGAACAGGCTGAGAAGCTGCTTCAAATGGCACCAGCTAGTTAA

Protein sequence

MGGIGPCCSTLPSRSNLRTSWFDLRTVAHRRTYPGKQVLQRKVGIRAEVNFVNVEEAKKLIAVDGYAIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKPNPEFVQSVKAQFSPQSKLLLVCQEGLRSTAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS
Homology
[Close]
BLAST of Lcy04g002680 vs. ExPASy Swiss-Prot
Match: O48529 (Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR9 PE=2 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 5.8e-84
Identity = 150/199 (75.38%), Postives = 178/199 (89.45%), Query Frame = 0 

Query: 31  RTYPGKQVLQRKVGIRAEVNFVNVEEAKKLIAVDGYAIVDVRDKSQFDRAHIKSCYHVPL 90
           ++  G  + +R + I AE+ FVN EEAK+LIA +GY++VDVRDK+QF+RAHIKSC H+PL
Sbjct: 31  KSVSGNVIRRRSLRIAAELKFVNAEEAKQLIAEEGYSVVDVRDKTQFERAHIKSCSHIPL 90

Query: 91  FIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKPNPEFVQSVKAQFSPQSKLLLVCQEGLR 150
           FI N+DND+GTIIKRTVHNNFSGLFFGLPFTK NPEF++SV+ +FS  SKLLLVCQEGLR
Sbjct: 91  FIYNEDNDIGTIIKRTVHNNFSGLFFGLPFTKVNPEFLKSVRNEFSQDSKLLLVCQEGLR 150

Query: 151 STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGT 210
           S AAA +LE+AG+ENIAC+TSGLQSVKPGTF+SVG TELQ+AGKAGL+TIQGKISAVLGT
Sbjct: 151 SAAAASRLEEAGYENIACVTSGLQSVKPGTFESVGSTELQNAGKAGLITIQGKISAVLGT 210

Query: 211 VLICAYLFITFFPEQAEKL 230
           VL+CAYLFI FFP+QAEKL
Sbjct: 211 VLVCAYLFIQFFPDQAEKL 229

[Close]
BLAST of Lcy04g002680 vs. ExPASy Swiss-Prot
Match: Q9SR92 (Rhodanese-like domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=STR10 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.2e-22
Identity = 55/145 (37.93%), Postives = 87/145 (60.00%), Query Frame = 0 

Query: 45  IRAEVNFVNVEEAKKLIAVDGYAIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIK 104
           +  +V  V  +EA  ++A +GY ++DVR   + ++A +K   HVPLF+E+ DN   T++K
Sbjct: 41  LSGKVRAVEPKEANAVVASEGYILLDVRPAWEREKARVKGSLHVPLFVEDPDNGPITLLK 100

Query: 105 RTVHNNFSGLFFGLPFTKPNPEF-VQSVKAQFSPQSKLLLVCQEGLRSTAAADKLEKAGF 164
           + +H  + GL+ G  FT  N EF ++ V+A    +SK+L+VC EGLRS AA  KL   G+
Sbjct: 101 KWIHLGYIGLWTGQRFTMINDEFALRVVEAVPDKESKVLVVCGEGLRSLAAVSKLHGEGY 160

Query: 165 ENIACITSGLQSVKPGTFDSVGPTE 189
           +++  +T G   V  G F  +  TE
Sbjct: 161 KSLGWLTGGFNRVSEGDFPEIEGTE 185

[Close]
BLAST of Lcy04g002680 vs. ExPASy Swiss-Prot
Match: Q0WWT7 (Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR11 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.3e-15
Identity = 49/155 (31.61%), Postives = 79/155 (50.97%), Query Frame = 0 

Query: 48  EVNFVNVEEAKKLIAVDGYAIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTV 107
           +V  +   EA   I++    ++DVR  S+ ++A IK    VP+F  + + D GT+ K+  
Sbjct: 87  KVKLLTPREAGYAISLSNKPLLDVRPSSERNKAWIKGSTWVPIFDNDDNLDAGTLSKKVT 146

Query: 108 HNNFSGLFFGLPFTKPNPEFVQSVKAQFSPQSKLLLVCQEGLRSTAAADKLEKAGFENIA 167
                G + G P    N  F+  V+ +F   S+L++ CQ+GLRS AA + L  AG+EN+ 
Sbjct: 147 SFAMGGWWSGAPTLSFNRLFLSKVEEKFPKDSELIVACQKGLRSLAACELLYNAGYENLF 206

Query: 168 CITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQG 203
            +  GL+S +     + G   L+ AG  G     G
Sbjct: 207 WVQGGLESAQDEDLVTEGVQPLKLAGIGGFSEFLG 241

[Close]
BLAST of Lcy04g002680 vs. ExPASy TrEMBL
Match: A0A5A7TCE9 (Rhodanese-like domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00610 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.5e-122
Identity = 222/236 (94.07%), Postives = 226/236 (95.76%), Query Frame = 0 

Query: 1   MGGIGPCCSTLPSRSNLRTSWFDLRTVAHRRTYPGKQVLQRKVGIRAEVNFVNVEEAKKL 60
           MGGIGPCCSTLPSRSN RTSW  LRTV HRRTYPGKQVLQRKVGI+AE+NFVN EEAKKL
Sbjct: 11  MGGIGPCCSTLPSRSNPRTSWLTLRTVPHRRTYPGKQVLQRKVGIKAEINFVNAEEAKKL 70

Query: 61  IAVDGYAIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 120
           IAVDGY IVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF
Sbjct: 71  IAVDGYVIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 130

Query: 121 TKPNPEFVQSVKAQFSPQSKLLLVCQEGLRSTAAADKLEKAGFENIACITSGLQSVKPGT 180
           TKPNPEFVQSVKAQ SPQSKLLLVCQEGLRSTAAADKL+KAGFENIACITSGLQSVKPGT
Sbjct: 131 TKPNPEFVQSVKAQLSPQSKLLLVCQEGLRSTAAADKLDKAGFENIACITSGLQSVKPGT 190

Query: 181 FDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS 237
           F+SVG TELQDAGKAGLVTIQGKISAVLGTVLICAYLFIT FPEQAEKLLQMAP S
Sbjct: 191 FESVGSTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITLFPEQAEKLLQMAPTS 246

[Close]
BLAST of Lcy04g002680 vs. ExPASy TrEMBL
Match: A0A1S3B5W0 (rhodanese-like domain-containing protein 9, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486146 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.5e-122
Identity = 222/236 (94.07%), Postives = 226/236 (95.76%), Query Frame = 0 

Query: 1   MGGIGPCCSTLPSRSNLRTSWFDLRTVAHRRTYPGKQVLQRKVGIRAEVNFVNVEEAKKL 60
           MGGIGPCCSTLPSRSN RTSW  LRTV HRRTYPGKQVLQRKVGI+AE+NFVN EEAKKL
Sbjct: 11  MGGIGPCCSTLPSRSNPRTSWLTLRTVPHRRTYPGKQVLQRKVGIKAEINFVNAEEAKKL 70

Query: 61  IAVDGYAIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 120
           IAVDGY IVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF
Sbjct: 71  IAVDGYVIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 130

Query: 121 TKPNPEFVQSVKAQFSPQSKLLLVCQEGLRSTAAADKLEKAGFENIACITSGLQSVKPGT 180
           TKPNPEFVQSVKAQ SPQSKLLLVCQEGLRSTAAADKL+KAGFENIACITSGLQSVKPGT
Sbjct: 131 TKPNPEFVQSVKAQLSPQSKLLLVCQEGLRSTAAADKLDKAGFENIACITSGLQSVKPGT 190

Query: 181 FDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS 237
           F+SVG TELQDAGKAGLVTIQGKISAVLGTVLICAYLFIT FPEQAEKLLQMAP S
Sbjct: 191 FESVGSTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITLFPEQAEKLLQMAPTS 246

[Close]
BLAST of Lcy04g002680 vs. ExPASy TrEMBL
Match: A0A6J1DN76 (rhodanese-like domain-containing protein 9, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022145 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 2.6e-119
Identity = 218/236 (92.37%), Postives = 225/236 (95.34%), Query Frame = 0 

Query: 1   MGGIGPCCSTLPSRSNLRTSWFDLRTVAHRRTYPGKQVLQRKVGIRAEVNFVNVEEAKKL 60
           MGG GPCCSTLPSRSNLR SW +++T  HRRTYP KQVL R VGI+AE+NFVNVEEAKKL
Sbjct: 1   MGGTGPCCSTLPSRSNLRASWINIKTGPHRRTYPRKQVL-RSVGIKAEINFVNVEEAKKL 60

Query: 61  IAVDGYAIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 120
           IAVDGYAIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTI+KRTVHNNFSGLFFGLPF
Sbjct: 61  IAVDGYAIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIVKRTVHNNFSGLFFGLPF 120

Query: 121 TKPNPEFVQSVKAQFSPQSKLLLVCQEGLRSTAAADKLEKAGFENIACITSGLQSVKPGT 180
           TKPNPEFVQSVKAQFSPQSKLLLVCQEGLRSTAAAD+LEKAGFENIACITSGLQSVKPGT
Sbjct: 121 TKPNPEFVQSVKAQFSPQSKLLLVCQEGLRSTAAADRLEKAGFENIACITSGLQSVKPGT 180

Query: 181 FDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS 237
           FDSVG TELQDAGKAGLVTIQGKISAVLGTVLICAYLFIT FPEQAEKLLQMAP S
Sbjct: 181 FDSVGSTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITLFPEQAEKLLQMAPTS 235

[Close]
BLAST of Lcy04g002680 vs. ExPASy TrEMBL
Match: A0A0A0L2N4 (Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G563690 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.2e-118
Identity = 216/234 (92.31%), Postives = 222/234 (94.87%), Query Frame = 0 

Query: 1   MGGIGPCCSTLPSRSNLRTSWFDLRTVAHRRTYPGKQVLQRKVGIRAEVNFVNVEEAKKL 60
           M GI PCCSTLPSRSN RTSW  LRTV HRRTYPGK+VLQRKVGI+AE+NFVN EEAKKL
Sbjct: 11  MAGIRPCCSTLPSRSNPRTSWLTLRTVPHRRTYPGKRVLQRKVGIKAEINFVNAEEAKKL 70

Query: 61  IAVDGYAIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 120
           IAVDGY IVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF
Sbjct: 71  IAVDGYVIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 130

Query: 121 TKPNPEFVQSVKAQFSPQSKLLLVCQEGLRSTAAADKLEKAGFENIACITSGLQSVKPGT 180
           TK NPEFVQSVKAQ SPQSKLLLVCQEGLRSTAAADKLEKAGFENIACITSGLQSVKPG+
Sbjct: 131 TKLNPEFVQSVKAQLSPQSKLLLVCQEGLRSTAAADKLEKAGFENIACITSGLQSVKPGS 190

Query: 181 FDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAP 235
           FDSVG T+LQDAGKAGLVTIQGKISAVLGTVLICAYLF+T FPEQAEKLLQMAP
Sbjct: 191 FDSVGSTQLQDAGKAGLVTIQGKISAVLGTVLICAYLFVTLFPEQAEKLLQMAP 244

[Close]
BLAST of Lcy04g002680 vs. ExPASy TrEMBL
Match: A0A6J1EKQ2 (rhodanese-like domain-containing protein 9, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435449 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.4e-117
Identity = 212/236 (89.83%), Postives = 221/236 (93.64%), Query Frame = 0 

Query: 1   MGGIGPCCSTLPSRSNLRTSWFDLRTVAHRRTYPGKQVLQRKVGIRAEVNFVNVEEAKKL 60
           M  IGPCCSTLP+RSNLRTSW  +RTV HRRTYPGKQVLQRK GIRAE+NFVNVEEAKKL
Sbjct: 31  MAAIGPCCSTLPARSNLRTSWLSIRTVPHRRTYPGKQVLQRKFGIRAEINFVNVEEAKKL 90

Query: 61  IAVDGYAIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 120
            A DGY IVDVRDKSQFDRAHIKSCYHVPLFI+N+DNDLGTIIKRTVHNNFSGLFFGLPF
Sbjct: 91  TADDGYVIVDVRDKSQFDRAHIKSCYHVPLFIQNEDNDLGTIIKRTVHNNFSGLFFGLPF 150

Query: 121 TKPNPEFVQSVKAQFSPQSKLLLVCQEGLRSTAAADKLEKAGFENIACITSGLQSVKPGT 180
           TKPNPEFVQSVKAQFSPQ+KLLLVCQEGLRS AAADKLEKAGFENIACITSGLQSVKPGT
Sbjct: 151 TKPNPEFVQSVKAQFSPQTKLLLVCQEGLRSAAAADKLEKAGFENIACITSGLQSVKPGT 210

Query: 181 FDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS 237
           F+SVG  ELQDAGKAGLV IQGKISAVLGTVLICAYLFIT FP+QAEKLLQM P+S
Sbjct: 211 FESVGSGELQDAGKAGLVQIQGKISAVLGTVLICAYLFITLFPDQAEKLLQMVPSS 266

[Close]
BLAST of Lcy04g002680 vs. NCBI nr
Match: XP_038883761.1 (rhodanese-like domain-containing protein 9, chloroplastic [Benincasa hispida])

HSP 1 Score: 454.9 bits (1169), Expect = 4.2e-124
Identity = 225/236 (95.34%), Postives = 230/236 (97.46%), Query Frame = 0 

Query: 1   MGGIGPCCSTLPSRSNLRTSWFDLRTVAHRRTYPGKQVLQRKVGIRAEVNFVNVEEAKKL 60
           MG IGPCCSTLPSRSNLRTSW  LRTV HRRTYPGKQVLQRKVGI+AE+NFVNVEEAKKL
Sbjct: 1   MGRIGPCCSTLPSRSNLRTSWLTLRTVPHRRTYPGKQVLQRKVGIKAEINFVNVEEAKKL 60

Query: 61  IAVDGYAIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 120
           IAVDGYAI+DVRDKSQF+RAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF
Sbjct: 61  IAVDGYAIIDVRDKSQFNRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 120

Query: 121 TKPNPEFVQSVKAQFSPQSKLLLVCQEGLRSTAAADKLEKAGFENIACITSGLQSVKPGT 180
           TKPNPEFVQSVKAQFSPQSKLL+VCQEGLRSTAAADKLEKAGFENIACITSGLQSVKPGT
Sbjct: 121 TKPNPEFVQSVKAQFSPQSKLLIVCQEGLRSTAAADKLEKAGFENIACITSGLQSVKPGT 180

Query: 181 FDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS 237
           FDSVG TELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAP S
Sbjct: 181 FDSVGSTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPTS 236

[Close]
BLAST of Lcy04g002680 vs. NCBI nr
Match: XP_008442228.1 (PREDICTED: rhodanese-like domain-containing protein 9, chloroplastic isoform X1 [Cucumis melo] >KAA0041142.1 rhodanese-like domain-containing protein 9 [Cucumis melo var. makuwa])

HSP 1 Score: 448.0 bits (1151), Expect = 5.1e-122
Identity = 222/236 (94.07%), Postives = 226/236 (95.76%), Query Frame = 0 

Query: 1   MGGIGPCCSTLPSRSNLRTSWFDLRTVAHRRTYPGKQVLQRKVGIRAEVNFVNVEEAKKL 60
           MGGIGPCCSTLPSRSN RTSW  LRTV HRRTYPGKQVLQRKVGI+AE+NFVN EEAKKL
Sbjct: 11  MGGIGPCCSTLPSRSNPRTSWLTLRTVPHRRTYPGKQVLQRKVGIKAEINFVNAEEAKKL 70

Query: 61  IAVDGYAIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 120
           IAVDGY IVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF
Sbjct: 71  IAVDGYVIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 130

Query: 121 TKPNPEFVQSVKAQFSPQSKLLLVCQEGLRSTAAADKLEKAGFENIACITSGLQSVKPGT 180
           TKPNPEFVQSVKAQ SPQSKLLLVCQEGLRSTAAADKL+KAGFENIACITSGLQSVKPGT
Sbjct: 131 TKPNPEFVQSVKAQLSPQSKLLLVCQEGLRSTAAADKLDKAGFENIACITSGLQSVKPGT 190

Query: 181 FDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS 237
           F+SVG TELQDAGKAGLVTIQGKISAVLGTVLICAYLFIT FPEQAEKLLQMAP S
Sbjct: 191 FESVGSTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITLFPEQAEKLLQMAPTS 246

[Close]
BLAST of Lcy04g002680 vs. NCBI nr
Match: XP_022155002.1 (rhodanese-like domain-containing protein 9, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 438.0 bits (1125), Expect = 5.3e-119
Identity = 218/236 (92.37%), Postives = 225/236 (95.34%), Query Frame = 0 

Query: 1   MGGIGPCCSTLPSRSNLRTSWFDLRTVAHRRTYPGKQVLQRKVGIRAEVNFVNVEEAKKL 60
           MGG GPCCSTLPSRSNLR SW +++T  HRRTYP KQVL R VGI+AE+NFVNVEEAKKL
Sbjct: 1   MGGTGPCCSTLPSRSNLRASWINIKTGPHRRTYPRKQVL-RSVGIKAEINFVNVEEAKKL 60

Query: 61  IAVDGYAIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 120
           IAVDGYAIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTI+KRTVHNNFSGLFFGLPF
Sbjct: 61  IAVDGYAIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIVKRTVHNNFSGLFFGLPF 120

Query: 121 TKPNPEFVQSVKAQFSPQSKLLLVCQEGLRSTAAADKLEKAGFENIACITSGLQSVKPGT 180
           TKPNPEFVQSVKAQFSPQSKLLLVCQEGLRSTAAAD+LEKAGFENIACITSGLQSVKPGT
Sbjct: 121 TKPNPEFVQSVKAQFSPQSKLLLVCQEGLRSTAAADRLEKAGFENIACITSGLQSVKPGT 180

Query: 181 FDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS 237
           FDSVG TELQDAGKAGLVTIQGKISAVLGTVLICAYLFIT FPEQAEKLLQMAP S
Sbjct: 181 FDSVGSTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITLFPEQAEKLLQMAPTS 235

[Close]
BLAST of Lcy04g002680 vs. NCBI nr
Match: XP_004144667.1 (rhodanese-like domain-containing protein 9, chloroplastic [Cucumis sativus] >KGN54867.1 hypothetical protein Csa_011925 [Cucumis sativus])

HSP 1 Score: 434.9 bits (1117), Expect = 4.5e-118
Identity = 216/234 (92.31%), Postives = 222/234 (94.87%), Query Frame = 0 

Query: 1   MGGIGPCCSTLPSRSNLRTSWFDLRTVAHRRTYPGKQVLQRKVGIRAEVNFVNVEEAKKL 60
           M GI PCCSTLPSRSN RTSW  LRTV HRRTYPGK+VLQRKVGI+AE+NFVN EEAKKL
Sbjct: 11  MAGIRPCCSTLPSRSNPRTSWLTLRTVPHRRTYPGKRVLQRKVGIKAEINFVNAEEAKKL 70

Query: 61  IAVDGYAIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 120
           IAVDGY IVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF
Sbjct: 71  IAVDGYVIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 130

Query: 121 TKPNPEFVQSVKAQFSPQSKLLLVCQEGLRSTAAADKLEKAGFENIACITSGLQSVKPGT 180
           TK NPEFVQSVKAQ SPQSKLLLVCQEGLRSTAAADKLEKAGFENIACITSGLQSVKPG+
Sbjct: 131 TKLNPEFVQSVKAQLSPQSKLLLVCQEGLRSTAAADKLEKAGFENIACITSGLQSVKPGS 190

Query: 181 FDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAP 235
           FDSVG T+LQDAGKAGLVTIQGKISAVLGTVLICAYLF+T FPEQAEKLLQMAP
Sbjct: 191 FDSVGSTQLQDAGKAGLVTIQGKISAVLGTVLICAYLFVTLFPEQAEKLLQMAP 244

[Close]
BLAST of Lcy04g002680 vs. NCBI nr
Match: XP_022928591.1 (rhodanese-like domain-containing protein 9, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 431.4 bits (1108), Expect = 5.0e-117
Identity = 212/236 (89.83%), Postives = 221/236 (93.64%), Query Frame = 0 

Query: 1   MGGIGPCCSTLPSRSNLRTSWFDLRTVAHRRTYPGKQVLQRKVGIRAEVNFVNVEEAKKL 60
           M  IGPCCSTLP+RSNLRTSW  +RTV HRRTYPGKQVLQRK GIRAE+NFVNVEEAKKL
Sbjct: 31  MAAIGPCCSTLPARSNLRTSWLSIRTVPHRRTYPGKQVLQRKFGIRAEINFVNVEEAKKL 90

Query: 61  IAVDGYAIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPF 120
            A DGY IVDVRDKSQFDRAHIKSCYHVPLFI+N+DNDLGTIIKRTVHNNFSGLFFGLPF
Sbjct: 91  TADDGYVIVDVRDKSQFDRAHIKSCYHVPLFIQNEDNDLGTIIKRTVHNNFSGLFFGLPF 150

Query: 121 TKPNPEFVQSVKAQFSPQSKLLLVCQEGLRSTAAADKLEKAGFENIACITSGLQSVKPGT 180
           TKPNPEFVQSVKAQFSPQ+KLLLVCQEGLRS AAADKLEKAGFENIACITSGLQSVKPGT
Sbjct: 151 TKPNPEFVQSVKAQFSPQTKLLLVCQEGLRSAAAADKLEKAGFENIACITSGLQSVKPGT 210

Query: 181 FDSVGPTELQDAGKAGLVTIQGKISAVLGTVLICAYLFITFFPEQAEKLLQMAPAS 237
           F+SVG  ELQDAGKAGLV IQGKISAVLGTVLICAYLFIT FP+QAEKLLQM P+S
Sbjct: 211 FESVGSGELQDAGKAGLVQIQGKISAVLGTVLICAYLFITLFPDQAEKLLQMVPSS 266

[Close]
BLAST of Lcy04g002680 vs. TAIR 10
Match: AT2G42220.1 (Rhodanese/Cell cycle control phosphatase superfamily protein )

HSP 1 Score: 312.0 bits (798), Expect = 4.1e-85
Identity = 150/199 (75.38%), Postives = 178/199 (89.45%), Query Frame = 0 

Query: 31  RTYPGKQVLQRKVGIRAEVNFVNVEEAKKLIAVDGYAIVDVRDKSQFDRAHIKSCYHVPL 90
           ++  G  + +R + I AE+ FVN EEAK+LIA +GY++VDVRDK+QF+RAHIKSC H+PL
Sbjct: 31  KSVSGNVIRRRSLRIAAELKFVNAEEAKQLIAEEGYSVVDVRDKTQFERAHIKSCSHIPL 90

Query: 91  FIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKPNPEFVQSVKAQFSPQSKLLLVCQEGLR 150
           FI N+DND+GTIIKRTVHNNFSGLFFGLPFTK NPEF++SV+ +FS  SKLLLVCQEGLR
Sbjct: 91  FIYNEDNDIGTIIKRTVHNNFSGLFFGLPFTKVNPEFLKSVRNEFSQDSKLLLVCQEGLR 150

Query: 151 STAAADKLEKAGFENIACITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQGKISAVLGT 210
           S AAA +LE+AG+ENIAC+TSGLQSVKPGTF+SVG TELQ+AGKAGL+TIQGKISAVLGT
Sbjct: 151 SAAAASRLEEAGYENIACVTSGLQSVKPGTFESVGSTELQNAGKAGLITIQGKISAVLGT 210

Query: 211 VLICAYLFITFFPEQAEKL 230
           VL+CAYLFI FFP+QAEKL
Sbjct: 211 VLVCAYLFIQFFPDQAEKL 229

[Close]
BLAST of Lcy04g002680 vs. TAIR 10
Match: AT3G08920.1 (Rhodanese/Cell cycle control phosphatase superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 5.8e-23
Identity = 55/145 (37.93%), Postives = 87/145 (60.00%), Query Frame = 0 

Query: 45  IRAEVNFVNVEEAKKLIAVDGYAIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIK 104
           +  +V  V  +EA  ++A +GY ++DVR   + ++A +K   HVPLF+E+ DN   T++K
Sbjct: 41  LSGKVRAVEPKEANAVVASEGYILLDVRPAWEREKARVKGSLHVPLFVEDPDNGPITLLK 100

Query: 105 RTVHNNFSGLFFGLPFTKPNPEF-VQSVKAQFSPQSKLLLVCQEGLRSTAAADKLEKAGF 164
           + +H  + GL+ G  FT  N EF ++ V+A    +SK+L+VC EGLRS AA  KL   G+
Sbjct: 101 KWIHLGYIGLWTGQRFTMINDEFALRVVEAVPDKESKVLVVCGEGLRSLAAVSKLHGEGY 160

Query: 165 ENIACITSGLQSVKPGTFDSVGPTE 189
           +++  +T G   V  G F  +  TE
Sbjct: 161 KSLGWLTGGFNRVSEGDFPEIEGTE 185

[Close]
BLAST of Lcy04g002680 vs. TAIR 10
Match: AT4G24750.1 (Rhodanese/Cell cycle control phosphatase superfamily protein )

HSP 1 Score: 83.6 bits (205), Expect = 2.4e-16
Identity = 49/155 (31.61%), Postives = 79/155 (50.97%), Query Frame = 0 

Query: 48  EVNFVNVEEAKKLIAVDGYAIVDVRDKSQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTV 107
           +V  +   EA   I++    ++DVR  S+ ++A IK    VP+F  + + D GT+ K+  
Sbjct: 87  KVKLLTPREAGYAISLSNKPLLDVRPSSERNKAWIKGSTWVPIFDNDDNLDAGTLSKKVT 146

Query: 108 HNNFSGLFFGLPFTKPNPEFVQSVKAQFSPQSKLLLVCQEGLRSTAAADKLEKAGFENIA 167
                G + G P    N  F+  V+ +F   S+L++ CQ+GLRS AA + L  AG+EN+ 
Sbjct: 147 SFAMGGWWSGAPTLSFNRLFLSKVEEKFPKDSELIVACQKGLRSLAACELLYNAGYENLF 206

Query: 168 CITSGLQSVKPGTFDSVGPTELQDAGKAGLVTIQG 203
            +  GL+S +     + G   L+ AG  G     G
Sbjct: 207 WVQGGLESAQDEDLVTEGVQPLKLAGIGGFSEFLG 241

The following BLAST results are available for this feature:
BLAST of Lcy04g002680 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O485295.8e-8475.38Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thalian... [more]
Q9SR928.2e-2237.93Rhodanese-like domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=S... [more]
Q0WWT73.3e-1531.61Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thalia... [more]
BLAST of Lcy04g002680 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TCE92.5e-12294.07Rhodanese-like domain-containing protein 9 OS=Cucumis melo var. makuwa OX=119469... [more]
A0A1S3B5W02.5e-12294.07rhodanese-like domain-containing protein 9, chloroplastic isoform X1 OS=Cucumis ... [more]
A0A6J1DN762.6e-11992.37rhodanese-like domain-containing protein 9, chloroplastic isoform X1 OS=Momordic... [more]
A0A0A0L2N42.2e-11892.31Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G563690 P... [more]
A0A6J1EKQ22.4e-11789.83rhodanese-like domain-containing protein 9, chloroplastic isoform X1 OS=Cucurbit... [more]
BLAST of Lcy04g002680 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038883761.14.2e-12495.34rhodanese-like domain-containing protein 9, chloroplastic [Benincasa hispida][more]
XP_008442228.15.1e-12294.07PREDICTED: rhodanese-like domain-containing protein 9, chloroplastic isoform X1 ... [more]
XP_022155002.15.3e-11992.37rhodanese-like domain-containing protein 9, chloroplastic isoform X1 [Momordica ... [more]
XP_004144667.14.5e-11892.31rhodanese-like domain-containing protein 9, chloroplastic [Cucumis sativus] >KGN... [more]
XP_022928591.15.0e-11789.83rhodanese-like domain-containing protein 9, chloroplastic isoform X1 [Cucurbita ... [more]
BLAST of Lcy04g002680 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G42220.14.1e-8575.38Rhodanese/Cell cycle control phosphatase superfamily protein [more]
AT3G08920.15.8e-2337.93Rhodanese/Cell cycle control phosphatase superfamily protein [more]
AT4G24750.12.4e-1631.61Rhodanese/Cell cycle control phosphatase superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001763Rhodanese-like domainSMARTSM00450rhod_4coord: 52..182
e-value: 7.0E-13
score: 58.8
IPR001763Rhodanese-like domainPFAMPF00581Rhodanesecoord: 54..176
e-value: 6.3E-9
score: 36.3
IPR001763Rhodanese-like domainPROSITEPS50206RHODANESE_3coord: 62..185
score: 12.76285
IPR036873Rhodanese-like domain superfamilyGENE3D3.40.250.10coord: 49..180
e-value: 1.6E-20
score: 75.5
IPR036873Rhodanese-like domain superfamilySUPERFAMILY52821Rhodanese/Cell cycle control phosphatasecoord: 47..174
IPR044615Rhodanese-like domain-containing protein 9, chloroplasticPANTHERPTHR45508RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTICcoord: 1..235
NoneNo IPR availableCDDcd00158RHODcoord: 56..177
e-value: 8.28546E-14
score: 63.0874

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy04g002680.1Lcy04g002680.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane