Lcy04g002560 (gene) Sponge gourd (P93075) v1

Overview
NameLcy04g002560
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionExpansin-like A2
LocationChr04: 18873150 .. 18873963 (-)
RNA-Seq ExpressionLcy04g002560
SyntenyLcy04g002560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTAGTTTCTACCTATTTTATCACACAGATGGGGGAGCACGTGGTTATGGCAACTTGGCATTGCAGTTCTCAAATGGCTTCTTTGCAACTGTTGTTCCTTCTCTTTATAAACAAGGAGTTGGATGTGGCGCATGCTACCAAGTATATCTATTTTCTTTCCTTTTAAATTTACTTTTATGTTGAAATTTTTGTAATCTTCTTGTGCATTTACTGTATTTGTAGGTAAGGTGCAAAAATAGAAGGTGTTGCAACACAGTGGGGACTAAAGTAGTACTAACGGATCAAAATAATGACAACATAACAGACCTTGTTCTCAGTAAAAGAGCTTTCTTTACCATGGCTCTCAATGGTAAAGGTACAGATCTTTTGAATCTTGGAGTTGTTGATGTTGAATACAAGAGGTGAGTTTTAAAATGTTTGAATAGTATATAACACTTACCCTAAACGTATATGCAAATGAAATATAAAAAAAGTTTTCCCTTTTTTTAGGGTGCCCGGTGAATATCCAAATAAAAATTTGTTGATACAAGTGGAAGAATCAAGTTATAATCCATTCAACTTGGCAATAAAATTTTTGTACCAAGGTGGCCAAACATATATAGTTGCTGTGGATATAGCTCAGGTTGGTACTTCCGATTGGAGCCATATGAAGAGAAATTATGGAGCTGTTTGGGACACAGACAACGTACCTGAAGGTGCATTGCAACTAAGAATGGTGGTAACTTCAGGATATGATGGAAAATGGGTTTGGGCAAAGTCTGTGTTTCCTGCTGATTGGAGAGCTGGGGTAATCTATGACACTGGGGTTTAA

mRNA sequence

ATGATTAGTTTCTACCTATTTTATCACACAGATGGGGGAGCACGTGGTTATGGCAACTTGGCATTGCAGTTCTCAAATGGCTTCTTTGCAACTGTTGTTCCTTCTCTTTATAAACAAGGAGTTGGATGTGGCGCATGCTACCAAGTAAGGTGCAAAAATAGAAGGTGTTGCAACACAGTGGGGACTAAAGTAGTACTAACGGATCAAAATAATGACAACATAACAGACCTTGTTCTCAGTAAAAGAGCTTTCTTTACCATGGCTCTCAATGGTAAAGGTACAGATCTTTTGAATCTTGGAGTTGTTGATGTTGAATACAAGAGGGTGCCCGGTGAATATCCAAATAAAAATTTGTTGATACAAGTGGAAGAATCAAGTTATAATCCATTCAACTTGGCAATAAAATTTTTGTACCAAGGTGGCCAAACATATATAGTTGCTGTGGATATAGCTCAGGTTGGTACTTCCGATTGGAGCCATATGAAGAGAAATTATGGAGCTGTTTGGGACACAGACAACGTACCTGAAGGTGCATTGCAACTAAGAATGGTGGTAACTTCAGGATATGATGGAAAATGGGTTTGGGCAAAGTCTGTGTTTCCTGCTGATTGGAGAGCTGGGGTAATCTATGACACTGGGGTTTAA

Coding sequence (CDS)

ATGATTAGTTTCTACCTATTTTATCACACAGATGGGGGAGCACGTGGTTATGGCAACTTGGCATTGCAGTTCTCAAATGGCTTCTTTGCAACTGTTGTTCCTTCTCTTTATAAACAAGGAGTTGGATGTGGCGCATGCTACCAAGTAAGGTGCAAAAATAGAAGGTGTTGCAACACAGTGGGGACTAAAGTAGTACTAACGGATCAAAATAATGACAACATAACAGACCTTGTTCTCAGTAAAAGAGCTTTCTTTACCATGGCTCTCAATGGTAAAGGTACAGATCTTTTGAATCTTGGAGTTGTTGATGTTGAATACAAGAGGGTGCCCGGTGAATATCCAAATAAAAATTTGTTGATACAAGTGGAAGAATCAAGTTATAATCCATTCAACTTGGCAATAAAATTTTTGTACCAAGGTGGCCAAACATATATAGTTGCTGTGGATATAGCTCAGGTTGGTACTTCCGATTGGAGCCATATGAAGAGAAATTATGGAGCTGTTTGGGACACAGACAACGTACCTGAAGGTGCATTGCAACTAAGAATGGTGGTAACTTCAGGATATGATGGAAAATGGGTTTGGGCAAAGTCTGTGTTTCCTGCTGATTGGAGAGCTGGGGTAATCTATGACACTGGGGTTTAA

Protein sequence

MISFYLFYHTDGGARGYGNLALQFSNGFFATVVPSLYKQGVGCGACYQVRCKNRRCCNTVGTKVVLTDQNNDNITDLVLSKRAFFTMALNGKGTDLLNLGVVDVEYKRVPGEYPNKNLLIQVEESSYNPFNLAIKFLYQGGQTYIVAVDIAQVGTSDWSHMKRNYGAVWDTDNVPEGALQLRMVVTSGYDGKWVWAKSVFPADWRAGVIYDTGV
Homology
BLAST of Lcy04g002560 vs. ExPASy Swiss-Prot
Match: Q9SVE5 (Expansin-like A2 OS=Arabidopsis thaliana OX=3702 GN=EXLA2 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 5.4e-65
Identity = 121/204 (59.31%), Postives = 148/204 (72.55%), Query Frame = 0

Query: 13  GARGYGNLALQFSNGFFATVVPSLYKQGVGCGACYQVRCKNRRCCNTVGTKVVLTDQNND 72
           GA  YG++A  F  G  A  +PS+YK G GCGAC+QVRCKN   C++ GT V++TD N  
Sbjct: 43  GACAYGSMATGFFAGHIAAALPSIYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLNKT 102

Query: 73  NITDLVLSKRAFFTMA--LNGKGTDLLNLGVVDVEYKRVPGEYPNKNLLIQVEESSYNPF 132
           N TDLVLS RAF  MA  + G   DLL  G+VD+EY+RVP +Y NK + ++VEESS NP 
Sbjct: 103 NQTDLVLSSRAFRAMAKPVVGADRDLLKQGIVDIEYRRVPCDYGNKKMNVRVEESSKNPN 162

Query: 133 NLAIKFLYQGGQTYIVAVDIAQVGTSDWSHMKRNYGAVWDTDNVPEGALQLRMVVTSGYD 192
            LAIK LYQGGQT +VA+ IAQVG+S WS+M R++GAVW TD VP GALQ R VVT+GYD
Sbjct: 163 YLAIKLLYQGGQTEVVAIYIAQVGSSHWSYMTRSHGAVWVTDKVPNGALQFRFVVTAGYD 222

Query: 193 GKWVWAKSVFPADWRAGVIYDTGV 215
           GK VW++ V PA+W AG  YD GV
Sbjct: 223 GKMVWSQRVLPANWEAGKSYDAGV 246

BLAST of Lcy04g002560 vs. ExPASy Swiss-Prot
Match: Q9LZT4 (Expansin-like A1 OS=Arabidopsis thaliana OX=3702 GN=EXLA1 PE=2 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 9.3e-65
Identity = 118/205 (57.56%), Postives = 150/205 (73.17%), Query Frame = 0

Query: 13  GARGYGNLALQFSNGFFATVVPSLYKQGVGCGACYQVRCKNRRCCNTVGTKVVLTDQNND 72
           GA  YG++A  F  G  A  +PS+YK G GCGAC+QVRCKN + C+T GT V++TD N  
Sbjct: 42  GACAYGSMATSFFAGHIAAAIPSIYKDGAGCGACFQVRCKNPKLCSTKGTIVMITDLNKS 101

Query: 73  NITDLVLSKRAFFTMA--LNGKGTDLLNLGVVDVEYKRVPGEYPNKNLLIQVEESSYNPF 132
           N TDLVLS RAF  MA  + G   DLL  G+VD+EY+RVP +Y NKN+ ++VEE+S  P 
Sbjct: 102 NQTDLVLSSRAFRAMAKPIVGADKDLLKQGIVDIEYQRVPCDYGNKNMNVRVEEASKKPN 161

Query: 133 NLAIKFLYQGGQTYIVAVDIAQVGTS-DWSHMKRNYGAVWDTDNVPEGALQLRMVVTSGY 192
            L IK LYQGGQT +V++DIAQVG+S +W +M R++GAVW TD VP GA+Q R VVT GY
Sbjct: 162 YLEIKLLYQGGQTEVVSIDIAQVGSSPNWGYMTRSHGAVWVTDKVPTGAIQFRFVVTGGY 221

Query: 193 DGKWVWAKSVFPADWRAGVIYDTGV 215
           DGK +W++SV P++W AG IYD GV
Sbjct: 222 DGKMIWSQSVLPSNWEAGKIYDAGV 246

BLAST of Lcy04g002560 vs. ExPASy Swiss-Prot
Match: Q9LZT5 (Expansin-like A3 OS=Arabidopsis thaliana OX=3702 GN=EXLA3 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 7.9e-64
Identity = 119/204 (58.33%), Postives = 143/204 (70.10%), Query Frame = 0

Query: 13  GARGYGNLALQFSNGFFATVVPSLYKQGVGCGACYQVRCKNRRCCNTVGTKVVLTDQNND 72
           GA  YG +A  F  G  A  +PS+YK G GCGAC+QVRCKN + CN+ GT V++TD N  
Sbjct: 42  GACAYGPMATSFFAGHIAAAIPSIYKDGAGCGACFQVRCKNPKLCNSKGTIVMVTDLNTS 101

Query: 73  NITDLVLSKRAFFTMALNGKGTD--LLNLGVVDVEYKRVPGEYPNKNLLIQVEESSYNPF 132
           N TDLVLS RAF  MA    G D  LL  G+VDVEY+RVP  Y  +NL ++VEE+S  P 
Sbjct: 102 NQTDLVLSSRAFRAMAKPVVGVDKYLLKQGIVDVEYQRVPCNYGKRNLNVRVEEASKKPN 161

Query: 133 NLAIKFLYQGGQTYIVAVDIAQVGTSDWSHMKRNYGAVWDTDNVPEGALQLRMVVTSGYD 192
            LAIK LYQGGQT +V +DIA VG+S WS+M R++GAVW TD VP GALQ +  VT GYD
Sbjct: 162 YLAIKLLYQGGQTEVVGIDIAPVGSSQWSYMSRSHGAVWATDKVPTGALQFKFTVTGGYD 221

Query: 193 GKWVWAKSVFPADWRAGVIYDTGV 215
           GK VW+K V PA+W +G IYD GV
Sbjct: 222 GKTVWSKRVLPANWNSGRIYDAGV 245

BLAST of Lcy04g002560 vs. ExPASy Swiss-Prot
Match: Q10S70 (Expansin-like A1 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA1 PE=2 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.4e-60
Identity = 114/204 (55.88%), Postives = 138/204 (67.65%), Query Frame = 0

Query: 13  GARGYGNLALQFS-NGFFATVVPSLYKQGVGCGACYQVRCKNRRCCNTVGTKVVLTDQNN 72
           G+ GYG  A  F+  GF A   P+LY+ GVGCGACYQVRCK+++ C+  G +VV+TD+  
Sbjct: 57  GSCGYGTAAATFNGGGFLAAAGPALYRGGVGCGACYQVRCKDKKLCSNAGARVVVTDRAR 116

Query: 73  DNITDLVLSKRAFFTMALNGKGTDLLNLGVVDVEYKRVPGEYPNKNLLIQVEESSYNPFN 132
            N T LVLS  AF  MA  G    L  L  VDVEYKRVP EY +++L ++V+E S  P  
Sbjct: 117 TNRTGLVLSSPAFAAMARPGMAASLTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNE 176

Query: 133 LAIKFLYQGGQTYIVAVDIAQVGTSDWSHMKRNYGAVWDTDNVPEGALQLRMVVTSGYDG 192
           L I FLYQGGQT IVAVD+AQVG+S W  M R +G  W   N P G LQ+R+VVT GYDG
Sbjct: 177 LTISFLYQGGQTDIVAVDVAQVGSSSWKFMTREHGPSWSMANAPPGPLQMRLVVTGGYDG 236

Query: 193 KWVWA-KSVFPADWRAGVIYDTGV 215
           KWVWA + V P  WRAG +YDTGV
Sbjct: 237 KWVWADREVLPRRWRAGEVYDTGV 260

BLAST of Lcy04g002560 vs. ExPASy Swiss-Prot
Match: Q7XCL0 (Expansin-like A2 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA2 PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.2e-58
Identity = 114/207 (55.07%), Postives = 139/207 (67.15%), Query Frame = 0

Query: 11  DGGARGYGNLALQFSNGFFATVVPSLYKQGVGCGACYQVRCKNRRCCNTVGTKVVLTDQ- 70
           + G+ GYG+LA  F+ G  A   P+L++ GVGCGAC+QVRCK+ + C+T G KVV+TD+ 
Sbjct: 50  NAGSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTDEA 109

Query: 71  NNDNITDLVLSKRAFFTMALNGKGTDLLNLGVVDVEYKRVPGEY-PNKNLLIQVEESSYN 130
            + N TDLVLS  A+  MA  G    L     VDVEYKRVP EY   +NL I+VEE S  
Sbjct: 110 RSTNRTDLVLSAAAYAAMARPGMAAQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSRP 169

Query: 131 PFNLAIKFLYQGGQTYIVAVDIAQVGTSDWSHMKRNYGAVWDTDNVPEGALQLRMVVTSG 190
           P  L+I+FLYQGGQT IVAVD+A VG+S+W  M R+YG  W T   P G LQ R+VVT G
Sbjct: 170 PRELSIRFLYQGGQTDIVAVDVATVGSSNWKFMTRDYGPAWSTAQAPAGPLQFRVVVTGG 229

Query: 191 YDGKWVWAK-SVFPADWRAGVIYDTGV 215
           YDGKWVWA   V P  W AG +YD GV
Sbjct: 230 YDGKWVWADGEVLPRRWTAGRVYDAGV 256

BLAST of Lcy04g002560 vs. ExPASy TrEMBL
Match: A0A5D3D657 (Expansin-like A2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold80547G00010 PE=3 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.1e-103
Identity = 182/205 (88.78%), Postives = 194/205 (94.63%), Query Frame = 0

Query: 11  DGGARGYGNLALQFSNGFFATVVPSLYKQGVGCGACYQVRCKNRRCCNTVGTKVVLTDQN 70
           DGGA GYGNLALQFSNGFFA  VPSLYKQG GCGACYQVRCKNRR CNTVGTKVVLTDQN
Sbjct: 2   DGGACGYGNLALQFSNGFFAAAVPSLYKQGAGCGACYQVRCKNRRLCNTVGTKVVLTDQN 61

Query: 71  NDNITDLVLSKRAFFTMALNGKGTDLLNLGVVDVEYKRVPGEYPN-KNLLIQVEESSYNP 130
           NDN+TDLVLS++AFFTMAL+GKG+DLLNLGVVDVEYKRVP EYPN +NLL++VEESSYNP
Sbjct: 62  NDNVTDLVLSQKAFFTMALSGKGSDLLNLGVVDVEYKRVPCEYPNYRNLLVRVEESSYNP 121

Query: 131 FNLAIKFLYQGGQTYIVAVDIAQVGTSDWSHMKRNYGAVWDTDNVPEGALQLRMVVTSGY 190
           F LAIKFLYQGGQT +VAVDIAQVGTSDWSHMKR+YGAVW+TDNVPEGALQLRMVVTSGY
Sbjct: 122 FKLAIKFLYQGGQTEMVAVDIAQVGTSDWSHMKRSYGAVWETDNVPEGALQLRMVVTSGY 181

Query: 191 DGKWVWAKSVFPADWRAGVIYDTGV 215
           DGKWVWAKSV PA+WRAG IYDTGV
Sbjct: 182 DGKWVWAKSVLPANWRAGAIYDTGV 206

BLAST of Lcy04g002560 vs. ExPASy TrEMBL
Match: A0A6J1C4W7 (expansin-like A2 OS=Momordica charantia OX=3673 GN=LOC111007952 PE=3 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 4.0e-103
Identity = 180/205 (87.80%), Postives = 191/205 (93.17%), Query Frame = 0

Query: 10  TDGGARGYGNLALQFSNGFFATVVPSLYKQGVGCGACYQVRCKNRRCCNTVGTKVVLTDQ 69
           T GGA GYGNLAL+FSNGF+A  VPSLYKQG GCGACYQVRCKNRR CNTVGTKVVLTDQ
Sbjct: 37  TYGGACGYGNLALEFSNGFYAAAVPSLYKQGAGCGACYQVRCKNRRMCNTVGTKVVLTDQ 96

Query: 70  NNDNITDLVLSKRAFFTMALNGKGTDLLNLGVVDVEYKRVPGEYPNKNLLIQVEESSYNP 129
           NNDN+TDLVLSKRAFFTMALNGKG DLLNLGV+DVEYKRVP EY  KNL+++VEESSYNP
Sbjct: 97  NNDNVTDLVLSKRAFFTMALNGKGADLLNLGVIDVEYKRVPCEYKYKNLVVRVEESSYNP 156

Query: 130 FNLAIKFLYQGGQTYIVAVDIAQVGTSDWSHMKRNYGAVWDTDNVPEGALQLRMVVTSGY 189
           F LAIKFLYQGGQT IVAVDIAQVGTSDWSHMKRNYGAVWDT+N+PEGALQLRMVVTSGY
Sbjct: 157 FYLAIKFLYQGGQTDIVAVDIAQVGTSDWSHMKRNYGAVWDTNNIPEGALQLRMVVTSGY 216

Query: 190 DGKWVWAKSVFPADWRAGVIYDTGV 215
           DGKWVWAKSV PADW++G IYDTGV
Sbjct: 217 DGKWVWAKSVLPADWKSGAIYDTGV 241

BLAST of Lcy04g002560 vs. ExPASy TrEMBL
Match: A0A1S3BHW6 (Expansin A7-like protein OS=Cucumis melo OX=3656 GN=LOC107990293 PE=2 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 6.8e-103
Identity = 182/206 (88.35%), Postives = 194/206 (94.17%), Query Frame = 0

Query: 10  TDGGARGYGNLALQFSNGFFATVVPSLYKQGVGCGACYQVRCKNRRCCNTVGTKVVLTDQ 69
           T GGA GYGNLALQFSNGFFA  VPSLYKQG GCGACYQVRCKNRR CNTVGTKVVLTDQ
Sbjct: 37  TYGGACGYGNLALQFSNGFFAAAVPSLYKQGAGCGACYQVRCKNRRLCNTVGTKVVLTDQ 96

Query: 70  NNDNITDLVLSKRAFFTMALNGKGTDLLNLGVVDVEYKRVPGEYPN-KNLLIQVEESSYN 129
           NNDN+TDLVLS++AFFTMAL+GKG+DLLNLGVVDVEYKRVP EYPN +NLL++VEESSYN
Sbjct: 97  NNDNVTDLVLSQKAFFTMALSGKGSDLLNLGVVDVEYKRVPCEYPNYRNLLVRVEESSYN 156

Query: 130 PFNLAIKFLYQGGQTYIVAVDIAQVGTSDWSHMKRNYGAVWDTDNVPEGALQLRMVVTSG 189
           PF LAIKFLYQGGQT +VAVDIAQVGTSDWSHMKR+YGAVW+TDNVPEGALQLRMVVTSG
Sbjct: 157 PFKLAIKFLYQGGQTEMVAVDIAQVGTSDWSHMKRSYGAVWETDNVPEGALQLRMVVTSG 216

Query: 190 YDGKWVWAKSVFPADWRAGVIYDTGV 215
           YDGKWVWAKSV PA+WRAG IYDTGV
Sbjct: 217 YDGKWVWAKSVLPANWRAGAIYDTGV 242

BLAST of Lcy04g002560 vs. ExPASy TrEMBL
Match: A0A6J1HZC5 (expansin-like A2 OS=Cucurbita maxima OX=3661 GN=LOC111468285 PE=3 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 6.4e-101
Identity = 176/205 (85.85%), Postives = 189/205 (92.20%), Query Frame = 0

Query: 10  TDGGARGYGNLALQFSNGFFATVVPSLYKQGVGCGACYQVRCKNRRCCNTVGTKVVLTDQ 69
           T GGA GYGNLALQFSNGFFA  VPSLYKQG GCGACYQVRCKNRR CNTVGTKVVLTDQ
Sbjct: 37  TYGGACGYGNLALQFSNGFFAAAVPSLYKQGAGCGACYQVRCKNRRLCNTVGTKVVLTDQ 96

Query: 70  NNDNITDLVLSKRAFFTMALNGKGTDLLNLGVVDVEYKRVPGEYPNKNLLIQVEESSYNP 129
           NNDN TDLVLS+RAFFTMALNGKG DLLNLGVVDVEYKRVP EYP++NLL++VEESSYNP
Sbjct: 97  NNDNATDLVLSQRAFFTMALNGKGADLLNLGVVDVEYKRVPCEYPSRNLLVRVEESSYNP 156

Query: 130 FNLAIKFLYQGGQTYIVAVDIAQVGTSDWSHMKRNYGAVWDTDNVPEGALQLRMVVTSGY 189
           F LAIKF YQGGQT ++AVD+AQVGTSDWSHMKR+YGAVW+TDNVPEGALQLRMVVTSGY
Sbjct: 157 FKLAIKFFYQGGQTDMIAVDVAQVGTSDWSHMKRSYGAVWETDNVPEGALQLRMVVTSGY 216

Query: 190 DGKWVWAKSVFPADWRAGVIYDTGV 215
           DGKWVWAKSV PA+W  G I++TGV
Sbjct: 217 DGKWVWAKSVLPANWGVGAIFNTGV 241

BLAST of Lcy04g002560 vs. ExPASy TrEMBL
Match: A0A6J1GKS8 (expansin-like A2 OS=Cucurbita moschata OX=3662 GN=LOC111455268 PE=3 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 8.3e-101
Identity = 176/205 (85.85%), Postives = 188/205 (91.71%), Query Frame = 0

Query: 10  TDGGARGYGNLALQFSNGFFATVVPSLYKQGVGCGACYQVRCKNRRCCNTVGTKVVLTDQ 69
           T GGA GYGNLALQFSNGFFA  VPSLYKQG GCGACYQVRCKNRR CNTVGTKVVLTDQ
Sbjct: 37  TYGGACGYGNLALQFSNGFFAAAVPSLYKQGAGCGACYQVRCKNRRLCNTVGTKVVLTDQ 96

Query: 70  NNDNITDLVLSKRAFFTMALNGKGTDLLNLGVVDVEYKRVPGEYPNKNLLIQVEESSYNP 129
           NNDN TDLVLS+RAFFTMALNGKG DLLNLGVVDVEYKRVP EYP +NLL++VEESSYNP
Sbjct: 97  NNDNATDLVLSQRAFFTMALNGKGADLLNLGVVDVEYKRVPCEYPGRNLLVRVEESSYNP 156

Query: 130 FNLAIKFLYQGGQTYIVAVDIAQVGTSDWSHMKRNYGAVWDTDNVPEGALQLRMVVTSGY 189
           F LAIKF YQGGQT ++AVD+AQVGTSDWSHMKR+YGAVW+TDNVPEGALQLRMVVTSGY
Sbjct: 157 FKLAIKFFYQGGQTDMIAVDVAQVGTSDWSHMKRSYGAVWETDNVPEGALQLRMVVTSGY 216

Query: 190 DGKWVWAKSVFPADWRAGVIYDTGV 215
           DGKWVWAKSV PA+W  G I++TGV
Sbjct: 217 DGKWVWAKSVLPANWGVGAIFNTGV 241

BLAST of Lcy04g002560 vs. NCBI nr
Match: KAE8645684.1 (hypothetical protein Csa_020448 [Cucumis sativus])

HSP 1 Score: 387.1 bits (993), Expect = 9.8e-104
Identity = 182/204 (89.22%), Postives = 192/204 (94.12%), Query Frame = 0

Query: 11  DGGARGYGNLALQFSNGFFATVVPSLYKQGVGCGACYQVRCKNRRCCNTVGTKVVLTDQN 70
           DGGA GYGNLALQFSNGFFA  VPSLYKQG GCGACYQVRCKNRR CNTVGTKVVLTDQN
Sbjct: 263 DGGACGYGNLALQFSNGFFAAAVPSLYKQGAGCGACYQVRCKNRRLCNTVGTKVVLTDQN 322

Query: 71  NDNITDLVLSKRAFFTMALNGKGTDLLNLGVVDVEYKRVPGEYPNKNLLIQVEESSYNPF 130
           NDN+TDLVLS +AFFTMALNGKG+DLLNLGVVDVEYKRVP EYPN+NLL++VEESSYNPF
Sbjct: 323 NDNVTDLVLSPKAFFTMALNGKGSDLLNLGVVDVEYKRVPCEYPNRNLLVRVEESSYNPF 382

Query: 131 NLAIKFLYQGGQTYIVAVDIAQVGTSDWSHMKRNYGAVWDTDNVPEGALQLRMVVTSGYD 190
            LAIK+LYQGGQT +VAVDIAQVGTSDWSHMKR+YGAVW+TDNVPEGALQLRMVVTSGYD
Sbjct: 383 KLAIKYLYQGGQTEMVAVDIAQVGTSDWSHMKRSYGAVWETDNVPEGALQLRMVVTSGYD 442

Query: 191 GKWVWAKSVFPADWRAGVIYDTGV 215
           GKWVWAKSV PA WRAG IYDTGV
Sbjct: 443 GKWVWAKSVLPATWRAGGIYDTGV 466

BLAST of Lcy04g002560 vs. NCBI nr
Match: XP_004144934.3 (expansin-like A2 [Cucumis sativus])

HSP 1 Score: 386.0 bits (990), Expect = 2.2e-103
Identity = 182/205 (88.78%), Postives = 192/205 (93.66%), Query Frame = 0

Query: 10  TDGGARGYGNLALQFSNGFFATVVPSLYKQGVGCGACYQVRCKNRRCCNTVGTKVVLTDQ 69
           T GGA GYGNLALQFSNGFFA  VPSLYKQG GCGACYQVRCKNRR CNTVGTKVVLTDQ
Sbjct: 39  TYGGACGYGNLALQFSNGFFAAAVPSLYKQGAGCGACYQVRCKNRRLCNTVGTKVVLTDQ 98

Query: 70  NNDNITDLVLSKRAFFTMALNGKGTDLLNLGVVDVEYKRVPGEYPNKNLLIQVEESSYNP 129
           NNDN+TDLVLS +AFFTMALNGKG+DLLNLGVVDVEYKRVP EYPN+NLL++VEESSYNP
Sbjct: 99  NNDNVTDLVLSPKAFFTMALNGKGSDLLNLGVVDVEYKRVPCEYPNRNLLVRVEESSYNP 158

Query: 130 FNLAIKFLYQGGQTYIVAVDIAQVGTSDWSHMKRNYGAVWDTDNVPEGALQLRMVVTSGY 189
           F LAIK+LYQGGQT +VAVDIAQVGTSDWSHMKR+YGAVW+TDNVPEGALQLRMVVTSGY
Sbjct: 159 FKLAIKYLYQGGQTEMVAVDIAQVGTSDWSHMKRSYGAVWETDNVPEGALQLRMVVTSGY 218

Query: 190 DGKWVWAKSVFPADWRAGVIYDTGV 215
           DGKWVWAKSV PA WRAG IYDTGV
Sbjct: 219 DGKWVWAKSVLPATWRAGGIYDTGV 243

BLAST of Lcy04g002560 vs. NCBI nr
Match: XP_038888788.1 (expansin-like A2 [Benincasa hispida])

HSP 1 Score: 384.8 bits (987), Expect = 4.8e-103
Identity = 180/205 (87.80%), Postives = 192/205 (93.66%), Query Frame = 0

Query: 10  TDGGARGYGNLALQFSNGFFATVVPSLYKQGVGCGACYQVRCKNRRCCNTVGTKVVLTDQ 69
           T GGA GYGNLALQFSNGFFA  VPSLYKQG GCGACYQVRCKNRR CNTVGTKVVLTDQ
Sbjct: 37  TYGGACGYGNLALQFSNGFFAAAVPSLYKQGAGCGACYQVRCKNRRLCNTVGTKVVLTDQ 96

Query: 70  NNDNITDLVLSKRAFFTMALNGKGTDLLNLGVVDVEYKRVPGEYPNKNLLIQVEESSYNP 129
           NNDN+TDLVLS +AFFTMALNGKG+DLLNLGVVDVEYKRVP EYPN+NL ++VEESSYNP
Sbjct: 97  NNDNVTDLVLSPKAFFTMALNGKGSDLLNLGVVDVEYKRVPCEYPNRNLFVRVEESSYNP 156

Query: 130 FNLAIKFLYQGGQTYIVAVDIAQVGTSDWSHMKRNYGAVWDTDNVPEGALQLRMVVTSGY 189
           F LAIK+ YQGGQT +VAVDIAQVGTSDWSHMKR+YGAVW+TDNVPEGALQLRMVVTSGY
Sbjct: 157 FKLAIKYFYQGGQTDMVAVDIAQVGTSDWSHMKRSYGAVWETDNVPEGALQLRMVVTSGY 216

Query: 190 DGKWVWAKSVFPADWRAGVIYDTGV 215
           DGKWVWAKSV PA+WRAG+IYDTGV
Sbjct: 217 DGKWVWAKSVLPANWRAGMIYDTGV 241

BLAST of Lcy04g002560 vs. NCBI nr
Match: KAA0040374.1 (expansin-like A2 [Cucumis melo var. makuwa] >TYK18983.1 expansin-like A2 [Cucumis melo var. makuwa])

HSP 1 Score: 384.4 bits (986), Expect = 6.3e-103
Identity = 182/205 (88.78%), Postives = 194/205 (94.63%), Query Frame = 0

Query: 11  DGGARGYGNLALQFSNGFFATVVPSLYKQGVGCGACYQVRCKNRRCCNTVGTKVVLTDQN 70
           DGGA GYGNLALQFSNGFFA  VPSLYKQG GCGACYQVRCKNRR CNTVGTKVVLTDQN
Sbjct: 2   DGGACGYGNLALQFSNGFFAAAVPSLYKQGAGCGACYQVRCKNRRLCNTVGTKVVLTDQN 61

Query: 71  NDNITDLVLSKRAFFTMALNGKGTDLLNLGVVDVEYKRVPGEYPN-KNLLIQVEESSYNP 130
           NDN+TDLVLS++AFFTMAL+GKG+DLLNLGVVDVEYKRVP EYPN +NLL++VEESSYNP
Sbjct: 62  NDNVTDLVLSQKAFFTMALSGKGSDLLNLGVVDVEYKRVPCEYPNYRNLLVRVEESSYNP 121

Query: 131 FNLAIKFLYQGGQTYIVAVDIAQVGTSDWSHMKRNYGAVWDTDNVPEGALQLRMVVTSGY 190
           F LAIKFLYQGGQT +VAVDIAQVGTSDWSHMKR+YGAVW+TDNVPEGALQLRMVVTSGY
Sbjct: 122 FKLAIKFLYQGGQTEMVAVDIAQVGTSDWSHMKRSYGAVWETDNVPEGALQLRMVVTSGY 181

Query: 191 DGKWVWAKSVFPADWRAGVIYDTGV 215
           DGKWVWAKSV PA+WRAG IYDTGV
Sbjct: 182 DGKWVWAKSVLPANWRAGAIYDTGV 206

BLAST of Lcy04g002560 vs. NCBI nr
Match: XP_022136197.1 (expansin-like A2 [Momordica charantia])

HSP 1 Score: 384.0 bits (985), Expect = 8.3e-103
Identity = 180/205 (87.80%), Postives = 191/205 (93.17%), Query Frame = 0

Query: 10  TDGGARGYGNLALQFSNGFFATVVPSLYKQGVGCGACYQVRCKNRRCCNTVGTKVVLTDQ 69
           T GGA GYGNLAL+FSNGF+A  VPSLYKQG GCGACYQVRCKNRR CNTVGTKVVLTDQ
Sbjct: 37  TYGGACGYGNLALEFSNGFYAAAVPSLYKQGAGCGACYQVRCKNRRMCNTVGTKVVLTDQ 96

Query: 70  NNDNITDLVLSKRAFFTMALNGKGTDLLNLGVVDVEYKRVPGEYPNKNLLIQVEESSYNP 129
           NNDN+TDLVLSKRAFFTMALNGKG DLLNLGV+DVEYKRVP EY  KNL+++VEESSYNP
Sbjct: 97  NNDNVTDLVLSKRAFFTMALNGKGADLLNLGVIDVEYKRVPCEYKYKNLVVRVEESSYNP 156

Query: 130 FNLAIKFLYQGGQTYIVAVDIAQVGTSDWSHMKRNYGAVWDTDNVPEGALQLRMVVTSGY 189
           F LAIKFLYQGGQT IVAVDIAQVGTSDWSHMKRNYGAVWDT+N+PEGALQLRMVVTSGY
Sbjct: 157 FYLAIKFLYQGGQTDIVAVDIAQVGTSDWSHMKRNYGAVWDTNNIPEGALQLRMVVTSGY 216

Query: 190 DGKWVWAKSVFPADWRAGVIYDTGV 215
           DGKWVWAKSV PADW++G IYDTGV
Sbjct: 217 DGKWVWAKSVLPADWKSGAIYDTGV 241

BLAST of Lcy04g002560 vs. TAIR 10
Match: AT4G38400.1 (expansin-like A2 )

HSP 1 Score: 248.8 bits (634), Expect = 3.9e-66
Identity = 121/204 (59.31%), Postives = 148/204 (72.55%), Query Frame = 0

Query: 13  GARGYGNLALQFSNGFFATVVPSLYKQGVGCGACYQVRCKNRRCCNTVGTKVVLTDQNND 72
           GA  YG++A  F  G  A  +PS+YK G GCGAC+QVRCKN   C++ GT V++TD N  
Sbjct: 43  GACAYGSMATGFFAGHIAAALPSIYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLNKT 102

Query: 73  NITDLVLSKRAFFTMA--LNGKGTDLLNLGVVDVEYKRVPGEYPNKNLLIQVEESSYNPF 132
           N TDLVLS RAF  MA  + G   DLL  G+VD+EY+RVP +Y NK + ++VEESS NP 
Sbjct: 103 NQTDLVLSSRAFRAMAKPVVGADRDLLKQGIVDIEYRRVPCDYGNKKMNVRVEESSKNPN 162

Query: 133 NLAIKFLYQGGQTYIVAVDIAQVGTSDWSHMKRNYGAVWDTDNVPEGALQLRMVVTSGYD 192
            LAIK LYQGGQT +VA+ IAQVG+S WS+M R++GAVW TD VP GALQ R VVT+GYD
Sbjct: 163 YLAIKLLYQGGQTEVVAIYIAQVGSSHWSYMTRSHGAVWVTDKVPNGALQFRFVVTAGYD 222

Query: 193 GKWVWAKSVFPADWRAGVIYDTGV 215
           GK VW++ V PA+W AG  YD GV
Sbjct: 223 GKMVWSQRVLPANWEAGKSYDAGV 246

BLAST of Lcy04g002560 vs. TAIR 10
Match: AT3G45970.1 (expansin-like A1 )

HSP 1 Score: 248.1 bits (632), Expect = 6.6e-66
Identity = 118/205 (57.56%), Postives = 150/205 (73.17%), Query Frame = 0

Query: 13  GARGYGNLALQFSNGFFATVVPSLYKQGVGCGACYQVRCKNRRCCNTVGTKVVLTDQNND 72
           GA  YG++A  F  G  A  +PS+YK G GCGAC+QVRCKN + C+T GT V++TD N  
Sbjct: 42  GACAYGSMATSFFAGHIAAAIPSIYKDGAGCGACFQVRCKNPKLCSTKGTIVMITDLNKS 101

Query: 73  NITDLVLSKRAFFTMA--LNGKGTDLLNLGVVDVEYKRVPGEYPNKNLLIQVEESSYNPF 132
           N TDLVLS RAF  MA  + G   DLL  G+VD+EY+RVP +Y NKN+ ++VEE+S  P 
Sbjct: 102 NQTDLVLSSRAFRAMAKPIVGADKDLLKQGIVDIEYQRVPCDYGNKNMNVRVEEASKKPN 161

Query: 133 NLAIKFLYQGGQTYIVAVDIAQVGTS-DWSHMKRNYGAVWDTDNVPEGALQLRMVVTSGY 192
            L IK LYQGGQT +V++DIAQVG+S +W +M R++GAVW TD VP GA+Q R VVT GY
Sbjct: 162 YLEIKLLYQGGQTEVVSIDIAQVGSSPNWGYMTRSHGAVWVTDKVPTGAIQFRFVVTGGY 221

Query: 193 DGKWVWAKSVFPADWRAGVIYDTGV 215
           DGK +W++SV P++W AG IYD GV
Sbjct: 222 DGKMIWSQSVLPSNWEAGKIYDAGV 246

BLAST of Lcy04g002560 vs. TAIR 10
Match: AT3G45960.2 (expansin-like A3 )

HSP 1 Score: 245.0 bits (624), Expect = 5.6e-65
Identity = 119/204 (58.33%), Postives = 143/204 (70.10%), Query Frame = 0

Query: 13  GARGYGNLALQFSNGFFATVVPSLYKQGVGCGACYQVRCKNRRCCNTVGTKVVLTDQNND 72
           GA  YG +A  F  G  A  +PS+YK G GCGAC+QVRCKN + CN+ GT V++TD N  
Sbjct: 42  GACAYGPMATSFFAGHIAAAIPSIYKDGAGCGACFQVRCKNPKLCNSKGTIVMVTDLNTS 101

Query: 73  NITDLVLSKRAFFTMALNGKGTD--LLNLGVVDVEYKRVPGEYPNKNLLIQVEESSYNPF 132
           N TDLVLS RAF  MA    G D  LL  G+VDVEY+RVP  Y  +NL ++VEE+S  P 
Sbjct: 102 NQTDLVLSSRAFRAMAKPVVGVDKYLLKQGIVDVEYQRVPCNYGKRNLNVRVEEASKKPN 161

Query: 133 NLAIKFLYQGGQTYIVAVDIAQVGTSDWSHMKRNYGAVWDTDNVPEGALQLRMVVTSGYD 192
            LAIK LYQGGQT +V +DIA VG+S WS+M R++GAVW TD VP GALQ +  VT GYD
Sbjct: 162 YLAIKLLYQGGQTEVVGIDIAPVGSSQWSYMSRSHGAVWATDKVPTGALQFKFTVTGGYD 221

Query: 193 GKWVWAKSVFPADWRAGVIYDTGV 215
           GK VW+K V PA+W +G IYD GV
Sbjct: 222 GKTVWSKRVLPANWNSGRIYDAGV 245

BLAST of Lcy04g002560 vs. TAIR 10
Match: AT3G45960.1 (expansin-like A3 )

HSP 1 Score: 238.0 bits (606), Expect = 6.8e-63
Identity = 115/197 (58.38%), Postives = 139/197 (70.56%), Query Frame = 0

Query: 20  LALQFSNGFFATVVPSLYKQGVGCGACYQVRCKNRRCCNTVGTKVVLTDQNNDNITDLVL 79
           +A  F  G  A  +PS+YK G GCGAC+QVRCKN + CN+ GT V++TD N  N TDLVL
Sbjct: 1   MATSFFAGHIAAAIPSIYKDGAGCGACFQVRCKNPKLCNSKGTIVMVTDLNTSNQTDLVL 60

Query: 80  SKRAFFTMALNGKGTD--LLNLGVVDVEYKRVPGEYPNKNLLIQVEESSYNPFNLAIKFL 139
           S RAF  MA    G D  LL  G+VDVEY+RVP  Y  +NL ++VEE+S  P  LAIK L
Sbjct: 61  SSRAFRAMAKPVVGVDKYLLKQGIVDVEYQRVPCNYGKRNLNVRVEEASKKPNYLAIKLL 120

Query: 140 YQGGQTYIVAVDIAQVGTSDWSHMKRNYGAVWDTDNVPEGALQLRMVVTSGYDGKWVWAK 199
           YQGGQT +V +DIA VG+S WS+M R++GAVW TD VP GALQ +  VT GYDGK VW+K
Sbjct: 121 YQGGQTEVVGIDIAPVGSSQWSYMSRSHGAVWATDKVPTGALQFKFTVTGGYDGKTVWSK 180

Query: 200 SVFPADWRAGVIYDTGV 215
            V PA+W +G IYD GV
Sbjct: 181 RVLPANWNSGRIYDAGV 197

BLAST of Lcy04g002560 vs. TAIR 10
Match: AT4G17030.1 (expansin-like B1 )

HSP 1 Score: 169.1 bits (427), Expect = 3.9e-42
Identity = 85/202 (42.08%), Postives = 112/202 (55.45%), Query Frame = 0

Query: 13  GARGYGNLALQFSNGFFATVVPSLYKQGVGCGACYQVRCKNRRCCNTVGTKVVLTDQNND 72
           G  GYG      +NG  + V   L+  G GCGACYQVRCK    C+  G  VV TD    
Sbjct: 46  GHCGYGEFGRDINNGEVSGVSWRLWNNGTGCGACYQVRCKIPPHCSEEGVYVVATDSGEG 105

Query: 73  NITDLVLSKRAFFTMALNGKGTDLLNLGVVDVEYKRVPGEYPNKNLLIQVEESSYNPFNL 132
           + TD +LS +A+  MA  G    L + GVV+VEY+R+P  Y   NL+ ++ E SYNP  L
Sbjct: 106 DGTDFILSPKAYGRMARPGTENQLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYL 165

Query: 133 AIKFLYQGGQTYIVAVDIAQVGTSDWSHMKRNYGAVWDTDNVPEGALQLRMVVTSGYDGK 192
           AI  LY GG   I+AV++ Q    +W  M+R +GAV D  N P G L LR +V       
Sbjct: 166 AILVLYVGGVNDILAVEVWQEDCKEWRRMRRVFGAVHDLQNPPRGTLTLRFLVYGSAGIN 225

Query: 193 WVWAKSVFPADWRAGVIYDTGV 215
           W+ + +  PADW AG  YD+ +
Sbjct: 226 WIQSPNAIPADWTAGATYDSNI 247

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SVE55.4e-6559.31Expansin-like A2 OS=Arabidopsis thaliana OX=3702 GN=EXLA2 PE=2 SV=1[more]
Q9LZT49.3e-6557.56Expansin-like A1 OS=Arabidopsis thaliana OX=3702 GN=EXLA1 PE=2 SV=1[more]
Q9LZT57.9e-6458.33Expansin-like A3 OS=Arabidopsis thaliana OX=3702 GN=EXLA3 PE=2 SV=1[more]
Q10S701.4e-6055.88Expansin-like A1 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA1 PE=2 SV=1[more]
Q7XCL02.2e-5855.07Expansin-like A2 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA2 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A5D3D6573.1e-10388.78Expansin-like A2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold80547G0... [more]
A0A6J1C4W74.0e-10387.80expansin-like A2 OS=Momordica charantia OX=3673 GN=LOC111007952 PE=3 SV=1[more]
A0A1S3BHW66.8e-10388.35Expansin A7-like protein OS=Cucumis melo OX=3656 GN=LOC107990293 PE=2 SV=1[more]
A0A6J1HZC56.4e-10185.85expansin-like A2 OS=Cucurbita maxima OX=3661 GN=LOC111468285 PE=3 SV=1[more]
A0A6J1GKS88.3e-10185.85expansin-like A2 OS=Cucurbita moschata OX=3662 GN=LOC111455268 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
KAE8645684.19.8e-10489.22hypothetical protein Csa_020448 [Cucumis sativus][more]
XP_004144934.32.2e-10388.78expansin-like A2 [Cucumis sativus][more]
XP_038888788.14.8e-10387.80expansin-like A2 [Benincasa hispida][more]
KAA0040374.16.3e-10388.78expansin-like A2 [Cucumis melo var. makuwa] >TYK18983.1 expansin-like A2 [Cucumi... [more]
XP_022136197.18.3e-10387.80expansin-like A2 [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT4G38400.13.9e-6659.31expansin-like A2 [more]
AT3G45970.16.6e-6657.56expansin-like A1 [more]
AT3G45960.25.6e-6558.33expansin-like A3 [more]
AT3G45960.16.8e-6358.38expansin-like A3 [more]
AT4G17030.13.9e-4242.08expansin-like B1 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007118Expansin/Lol pIPRINTSPR01225EXPANSNFAMLYcoord: 33..51
score: 39.21
coord: 99..115
score: 35.15
coord: 198..212
score: 30.17
coord: 11..29
score: 41.97
coord: 158..172
score: 41.0
IPR007117Expansin, cellulose-binding-like domainPFAMPF01357Expansin_Ccoord: 120..201
e-value: 1.8E-19
score: 69.5
IPR007117Expansin, cellulose-binding-like domainPROSITEPS50843EXPANSIN_CBDcoord: 130..212
score: 18.419659
IPR009009RlpA-like protein, double-psi beta-barrel domainPFAMPF03330DPBB_1coord: 32..106
e-value: 5.0E-9
score: 36.3
IPR036749Expansin, cellulose-binding-like domain superfamilyGENE3D2.60.40.760coord: 113..214
e-value: 1.4E-34
score: 119.9
IPR036749Expansin, cellulose-binding-like domain superfamilySUPERFAMILY49590PHL pollen allergencoord: 116..211
IPR036908RlpA-like domain superfamilyGENE3D2.40.40.10coord: 4..111
e-value: 4.3E-26
score: 93.6
IPR036908RlpA-like domain superfamilySUPERFAMILY50685Barwin-like endoglucanasescoord: 8..115
NoneNo IPR availablePANTHERPTHR31692:SF4EXPANSIN-LIKE A1-RELATEDcoord: 11..214
NoneNo IPR availablePANTHERPTHR31692EXPANSIN-B3coord: 11..214
IPR007112Expansin/pollen allergen, DPBB domainPROSITEPS50842EXPANSIN_EG45coord: 12..116
score: 21.287918

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy04g002560.1Lcy04g002560.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019953 sexual reproduction
cellular_component GO:0005576 extracellular region