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Lcy04g002520 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCTTAGCTGAACGATTCAGTTTTGAATTGAAAAGAGAATTTCGACTTTCGGATAGGAAGGAATTTGGAGGAGATTTCTTTACTTCATATGCTGACGACACGATCATCTTCTACCCTAAAGAAGGGGACACACTTCAAAATTGGTGGAACATTCTGAACTTGTTTATGGAAGGCTCTGGGCTCTCCTTAAATAGAGCAAAAACCTCCCTGATTGGTATAAATGTGGAAGAGCAGGAGGTTCTCAATTGGGCTGGCAAATTTAATTGTAAAAGGGAGGTCCTCCCAATTAATTACCTTGGTTTTATGCTGGGTGGGAATCATCATAGACAGTCTTTTTGGAACCCGATTATTGATAATTTGAAGGCTAAATTGGAAGGGTGGAAAAGCATTTCCTTATCAAAAGGAGGAAGAATTATGCTTGCTCAGTCGGTCTTTAATAGCATCCCGTTATACCAGTTCTCTCTTCGAAAGGCACCTAAAATAGTTACAAAAACCATGAAAAAGTTGATCAGAGACATCATTTGGAGCGGAGGTAATTACAAATCGGGGAGAAATATTGTCAAATGGGATTGAGCAGGTCTTCCTTTGGGCTCGGGTGGTCTAGGCATGGGATCTTTGGCTATCCGAAATGATGCCCTTCTAACTAAATGGTTTTGGAGATTTACACAGGAAAAAGACGCCTTATGGAGGAAGGTGGTAAGTATTATTTATGGTGTTATGCCTTTTGGATGGAAGACAAAGAAATTAAAGGATGCTAGGTCGTGGAAAGACATCGCCAAAAACTACCCATTCTTTGATAGATTATATCCAAGTTTAAAGTTGGATGTGGCAAGGAGATCTGGTTTTGGGAAGATGTGTGGTTAGATCATGAGCCTTTGAAGAACCTCTTCACTAACATACACAGATTATCCTACAAGAAGTTACACTCCATACATGATTGTTGGGAAGATGAAGAGCAGTCATAGAATTTGGCTTGCTGGCCTGCACAAAGGTATCTTTGACCATGAGATTGCTAGTTGGGTTGTCCTGGTGGATAAGCTGAACGCTTTTAGTGTAGGAAGGGAGAAAGATAGAATGGTATGGACCACAGATGCATCAGGAACCTTCTCCACTAAATCGGCGTTTAAAAACCTTGCCACACAAAGCCCCAAAATTCATACTCCCCTAATCAATCTGATCTGGAAGCACAAAAGTCCCAAGAAATCAAGGCCTTTTTGTGGTCTTTAG ATGCTCTTAGCTGAACGATTCAGTTTTGAATTGAAAAGAGAATTTCGACTTTCGGATAGGAAGGAATTTGGAGGAGATTTCTTTACTTCATATGCTGACGACACGATCATCTTCTACCCTAAAGAAGGGGACACACTTCAAAATTGGTGGAACATTCTGAACTTGTTTATGGAAGGCTCTGGGCTCTCCTTAAATAGAGCAAAAACCTCCCTGATTGGTATAAATGTGGAAGAGCAGGAGGTTCTCAATTGGGCTGGCAAATTTAATTGTAAAAGGGAGGTCCTCCCAATTAATTACCTTGGTTTTATGCTGGGTGGGAATCATCATAGACAGTCTTTTTGGAACCCGATTATTGATAATTTGAAGGCTAAATTGGAAGGGTGGAAAAGCATTTCCTTATCAAAAGGAGGAAGAATTATGCTTGCTCAGTCGGTCTTTAATAGCATCCCGTTATACCAGTTCTCTCTTCGAAAGGCACCTAAAATAGTTACAAAAACCATGAAAAAGTTGATCAGAGACATCATTTGGAGCGGAGATTATCCTACAAGAAGTTACACTCCATACATGATTGTTGGGAAGATGAAGAGCAGTCATAGAATTTGGCTTGCTGGCCTGCACAAAGGTATCTTTGACCATGAGATTGCTAGTTGGGTTGTCCTGGTGGATAAGCTGAACGCTTTTAGTGTAGGAAGGGAGAAAGATAGAATGGTATGGACCACAGATGCATCAGGAACCTTCTCCACTAAATCGGCGTTTAAAAACCTTGCCACACAAAGCCCCAAAATTCATACTCCCCTAATCAATCTGATCTGGAAGCACAAAAGTCCCAAGAAATCAAGGCCTTTTTGTGGTCTTTAG ATGCTCTTAGCTGAACGATTCAGTTTTGAATTGAAAAGAGAATTTCGACTTTCGGATAGGAAGGAATTTGGAGGAGATTTCTTTACTTCATATGCTGACGACACGATCATCTTCTACCCTAAAGAAGGGGACACACTTCAAAATTGGTGGAACATTCTGAACTTGTTTATGGAAGGCTCTGGGCTCTCCTTAAATAGAGCAAAAACCTCCCTGATTGGTATAAATGTGGAAGAGCAGGAGGTTCTCAATTGGGCTGGCAAATTTAATTGTAAAAGGGAGGTCCTCCCAATTAATTACCTTGGTTTTATGCTGGGTGGGAATCATCATAGACAGTCTTTTTGGAACCCGATTATTGATAATTTGAAGGCTAAATTGGAAGGGTGGAAAAGCATTTCCTTATCAAAAGGAGGAAGAATTATGCTTGCTCAGTCGGTCTTTAATAGCATCCCGTTATACCAGTTCTCTCTTCGAAAGGCACCTAAAATAGTTACAAAAACCATGAAAAAGTTGATCAGAGACATCATTTGGAGCGGAGATTATCCTACAAGAAGTTACACTCCATACATGATTGTTGGGAAGATGAAGAGCAGTCATAGAATTTGGCTTGCTGGCCTGCACAAAGGTATCTTTGACCATGAGATTGCTAGTTGGGTTGTCCTGGTGGATAAGCTGAACGCTTTTAGTGTAGGAAGGGAGAAAGATAGAATGGTATGGACCACAGATGCATCAGGAACCTTCTCCACTAAATCGGCGTTTAAAAACCTTGCCACACAAAGCCCCAAAATTCATACTCCCCTAATCAATCTGATCTGGAAGCACAAAAGTCCCAAGAAATCAAGGCCTTTTTGTGGTCTTTAG MLLAERFSFELKREFRLSDRKEFGGDFFTSYADDTIIFYPKEGDTLQNWWNILNLFMEGSGLSLNRAKTSLIGINVEEQEVLNWAGKFNCKREVLPINYLGFMLGGNHHRQSFWNPIIDNLKAKLEGWKSISLSKGGRIMLAQSVFNSIPLYQFSLRKAPKIVTKTMKKLIRDIIWSGDYPTRSYTPYMIVGKMKSSHRIWLAGLHKGIFDHEIASWVVLVDKLNAFSVGREKDRMVWTTDASGTFSTKSAFKNLATQSPKIHTPLINLIWKHKSPKKSRPFCGL Homology
BLAST of Lcy04g002520 vs. ExPASy TrEMBL
Match: A0A2U1MW63 (Reverse transcriptase domain-containing protein OS=Artemisia annua OX=35608 GN=CTI12_AA335310 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 1.0e-29 Identity = 71/157 (45.22%), Postives = 96/157 (61.15%), Query Frame = 0
BLAST of Lcy04g002520 vs. ExPASy TrEMBL
Match: A0A803PZS1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 3.9e-29 Identity = 82/245 (33.47%), Postives = 122/245 (49.80%), Query Frame = 0
BLAST of Lcy04g002520 vs. ExPASy TrEMBL
Match: A0A6P5MDE3 (uncharacterized protein LOC110273620 OS=Arachis duranensis OX=130453 GN=LOC110273620 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 1.9e-28 Identity = 67/149 (44.97%), Postives = 92/149 (61.74%), Query Frame = 0
BLAST of Lcy04g002520 vs. ExPASy TrEMBL
Match: A0A803P465 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 7.4e-28 Identity = 64/148 (43.24%), Postives = 93/148 (62.84%), Query Frame = 0
BLAST of Lcy04g002520 vs. ExPASy TrEMBL
Match: A0A4Y1R3V4 (VIRB2-interacting protein 2 OS=Prunus dulcis OX=3755 GN=Prudu_008314 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.3e-27 Identity = 66/166 (39.76%), Postives = 100/166 (60.24%), Query Frame = 0
BLAST of Lcy04g002520 vs. NCBI nr
Match: PWA65487.1 (hypothetical protein CTI12_AA335310 [Artemisia annua]) HSP 1 Score: 140.6 bits (353), Expect = 2.1e-29 Identity = 71/157 (45.22%), Postives = 96/157 (61.15%), Query Frame = 0
BLAST of Lcy04g002520 vs. NCBI nr
Match: XP_020982485.1 (uncharacterized protein LOC110273620 [Arachis duranensis]) HSP 1 Score: 136.3 bits (342), Expect = 4.0e-28 Identity = 67/149 (44.97%), Postives = 92/149 (61.74%), Query Frame = 0
BLAST of Lcy04g002520 vs. NCBI nr
Match: XP_016168179.1 (uncharacterized protein LOC107610679 [Arachis ipaensis]) HSP 1 Score: 136.0 bits (341), Expect = 5.2e-28 Identity = 67/147 (45.58%), Postives = 91/147 (61.90%), Query Frame = 0
BLAST of Lcy04g002520 vs. NCBI nr
Match: XP_016172733.1 (uncharacterized protein LOC107615139 [Arachis ipaensis]) HSP 1 Score: 134.8 bits (338), Expect = 1.2e-27 Identity = 69/147 (46.94%), Postives = 90/147 (61.22%), Query Frame = 0
BLAST of Lcy04g002520 vs. NCBI nr
Match: XP_016200256.1 (uncharacterized protein LOC107641275 [Arachis ipaensis]) HSP 1 Score: 134.4 bits (337), Expect = 1.5e-27 Identity = 67/149 (44.97%), Postives = 92/149 (61.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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