Lcy04g002110 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g002110
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RNase H domain-containing protein
Location	Chr04: 12738527 .. 12739051 (+)
RNA-Seq Expression	Lcy04g002110
Synteny	Lcy04g002110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGTGGTCGGGGTCTGCTGTAGATTAGAATTTGGGTGAGTATGCTGCTTCTTATATTCAGGCTTTTCGTTCAGCTGCTGCAGTGGGTGGTTTTGGTTCAGTTGGTCCAATTGACAGGAGCTGCGTACGTTGGTCTGCTCCGATGGGTCTGCTGTGAAACTGAATTCGGATGCAGCTTTCAGTTTGGATGGGGCTCATGTTGGTGCTGGTTTCATTCTCCGTAACTCATCTGGTAGTGTCTTATTTTATGGTATGCAGAAGCTTTCGATGTGTCTGTCGGTTGAGGTGGCTGAAGCGAAGGCAATGTATGAAGGGGTCCGAATGGCTTTCCAATTGGATTATTCTAGTCTCCAGGTTGAATCTGACTCGTTACGCTTGGTTCGTATCCTTCGGGGTGATTTGGAGGACATCTTAGAGGTTGGTGCGATTGTGGATTCTATTCTTTGCTTGGTAGCTGGTGATCCTTTATTTCAGGTTTCCTTTGTTCCGAGAGAGGGTAATCGTGTTGCTCATTTATGTTAG

mRNA sequence

ATGGTTGTGGTCGGGGAGCTGCGTACGTTGGTCTGCTCCGATGGGTCTGCTGTGAAACTGAATTCGGATGCAGCTTTCAGTTTGGATGGGGCTCATGTTGGTGCTGGTTTCATTCTCCGTAACTCATCTGGTAGTGTCTTATTTTATGGTATGCAGAAGCTTTCGATGTGTCTGTCGGTTGAGGTGGCTGAAGCGAAGGCAATGTATGAAGGGGTCCGAATGGCTTTCCAATTGGATTATTCTAGTCTCCAGGTTGAATCTGACTCGTTACGCTTGGTTCGTATCCTTCGGGGTGATTTGGAGGACATCTTAGAGGTTGGTGCGATTGTGGATTCTATTCTTTGCTTGGTAGCTGGTGATCCTTTATTTCAGGTTTCCTTTGTTCCGAGAGAGGGTAATCGTGTTGCTCATTTATGTTAG

Coding sequence (CDS)

ATGGTTGTGGTCGGGGAGCTGCGTACGTTGGTCTGCTCCGATGGGTCTGCTGTGAAACTGAATTCGGATGCAGCTTTCAGTTTGGATGGGGCTCATGTTGGTGCTGGTTTCATTCTCCGTAACTCATCTGGTAGTGTCTTATTTTATGGTATGCAGAAGCTTTCGATGTGTCTGTCGGTTGAGGTGGCTGAAGCGAAGGCAATGTATGAAGGGGTCCGAATGGCTTTCCAATTGGATTATTCTAGTCTCCAGGTTGAATCTGACTCGTTACGCTTGGTTCGTATCCTTCGGGGTGATTTGGAGGACATCTTAGAGGTTGGTGCGATTGTGGATTCTATTCTTTGCTTGGTAGCTGGTGATCCTTTATTTCAGGTTTCCTTTGTTCCGAGAGAGGGTAATCGTGTTGCTCATTTATGTTAG

Protein sequence

MVVVGELRTLVCSDGSAVKLNSDAAFSLDGAHVGAGFILRNSSGSVLFYGMQKLSMCLSVEVAEAKAMYEGVRMAFQLDYSSLQVESDSLRLVRILRGDLEDILEVGAIVDSILCLVAGDPLFQVSFVPREGNRVAHLC

Homology

[Close]

BLAST of Lcy04g002110 vs. ExPASy TrEMBL
Match: A0A5C7IFK3 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_009054 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 6.2e-12
Identity = 43/120 (35.83%), Postives = 69/120 (57.50%), Query Frame = 0


Query: 18  VKLNSDAAFSLDGAHVGAGFILRNSSGSVLFYGMQKLSMCLSVEVAEAKAMYEGVRMAFQ 77
           +K+N DAA  +      AG ++R+SSG +L           SV++AEAKA+YEG+ +A  
Sbjct: 142 IKINVDAALDVGRNRFSAGIVIRDSSGRILKAAALVFKGRTSVDIAEAKAIYEGILLATT 201

Query: 78  LDYSSLQVESDSLRLVRILRGDLEDILEVGAIVDSILCLVAGDPLFQVSFVPREGNRVAH 137
               SL +ESDSL +VR+  G++    +V  ++  I  L++ +    +S++PR  N VAH
Sbjct: 202 SGLQSLSIESDSLNVVRLCNGEISTRNDVFNVICDIQFLLSRERKISISYIPRSCNMVAH 261

[Close]

BLAST of Lcy04g002110 vs. ExPASy TrEMBL
Match: A0A5C7IST2 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_000473 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.4e-10
Identity = 40/120 (33.33%), Postives = 67/120 (55.83%), Query Frame = 0


Query: 18  VKLNSDAAFSLDGAHVGAGFILRNSSGSVLFYGMQKLSMCLSVEVAEAKAMYEGVRMAFQ 77
           +K+N DAA  +       G ++R+SSG +L       +   S ++AEAK +YEG+ +A  
Sbjct: 245 IKVNVDAALDVGRNKFSVGIVIRDSSGRILKSAALVFNGRTSTDIAEAKVIYEGLLLATS 304

Query: 78  LDYSSLQVESDSLRLVRILRGDLEDILEVGAIVDSILCLVAGDPLFQVSFVPREGNRVAH 137
                L +ESDSL +VR+  G++    +V  ++  I  L++ +    +S++PR  NRVAH
Sbjct: 305 SGLQPLSIESDSLNVVRLCNGEISTRNDVFNVICDIQFLLSRERKTSISYIPRSCNRVAH 364

[Close]

BLAST of Lcy04g002110 vs. ExPASy TrEMBL
Match: A0A5C7H0P0 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022911 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.4e-10
Identity = 42/119 (35.29%), Postives = 63/119 (52.94%), Query Frame = 0


Query: 19  KLNSDAAFSLDGAHVGAGFILRNSSGSVLFYGMQKLSMCLSVEVAEAKAMYEGVRMAFQL 78
           K+N DA+F L     G G I+R+  GS +      +  C SVE+ EA+A  EG+ +A  +
Sbjct: 282 KINCDASFQLRSGKAGVGVIIRDYKGSAIAARSSPVLCCSSVEMLEAQACLEGIHLAIDI 341

Query: 79  DYSSLQVESDSLRLVRILRGDLEDILEVGAIVDSILCLVAGDPLFQVSFVPREGNRVAH 138
             S + +ESD+  ++++L        E+GAI+ + L L A   L     V RE N VAH
Sbjct: 342 GVSGVIIESDAASVIQLLSDQTVPRTELGAIIHTSLALGASVNLLSYVAVRREANSVAH 400

[Close]

BLAST of Lcy04g002110 vs. ExPASy TrEMBL
Match: V4RLS8 (RNase H domain-containing protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10007098mg PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 7.5e-10
Identity = 40/119 (33.61%), Postives = 63/119 (52.94%), Query Frame = 0


Query: 19  KLNSDAAFSLDGAHVGAGFILRNSSGSVLFYGMQKLSMCLSVEVAEAKAMYEGVRMAFQL 78
           KLNSDAA +      G G ++RNS G  +     +      +E+AEA A+ EG+++A  L
Sbjct: 5   KLNSDAAINEADGLAGLGVVIRNSKGEFMTASNYRRRFFGDIELAEASAILEGIKLAEDL 64

Query: 79  DYSSLQVESDSLRLVRILRGDLEDILEVGAIVDSILCLVAGDPLFQVSFVPREGNRVAH 138
             + L VESDS+ ++R++   +   LE+  ++  I   +    LF V  + R  N VAH
Sbjct: 65  GLTPLVVESDSINVIRLMSRKINSNLEIDWVISEISAFICKKSLFAVKHILRSYNSVAH 123

[Close]

BLAST of Lcy04g002110 vs. ExPASy TrEMBL
Match: A0A5C7GW84 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_024858 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 9.8e-10
Identity = 41/119 (34.45%), Postives = 64/119 (53.78%), Query Frame = 0


Query: 19  KLNSDAAFSLDGAHVGAGFILRNSSGSVLFYGMQKLSMCLSVEVAEAKAMYEGVRMAFQL 78
           K+N+DAA  +   +VG   ++RN  G V+    +    C S ++AEA A+ EG+R+A   
Sbjct: 3   KINTDAALDIQENYVGIAVVIRNFQGKVMLSFCKNFQACYSPQIAEALAVVEGLRLAKNG 62

Query: 79  DYSSLQVESDSLRLVRILRGDLEDILEVGAIVDSILCLVAGDPLFQVSFVPREGNRVAH 138
            +    +ESD+L +VR +   +    EVG ++D IL        F  S+VPR   +VAH
Sbjct: 63  GFFPAVLESDALMVVRDICNKVSLSSEVGLVLDDILHFCRESNFFSFSYVPRLAIKVAH 121

[Close]

BLAST of Lcy04g002110 vs. NCBI nr
Match: TXG67779.1 (hypothetical protein EZV62_009054 [Acer yangbiense])

HSP 1 Score: 80.5 bits (197), Expect = 1.3e-11
Identity = 43/120 (35.83%), Postives = 69/120 (57.50%), Query Frame = 0


Query: 18  VKLNSDAAFSLDGAHVGAGFILRNSSGSVLFYGMQKLSMCLSVEVAEAKAMYEGVRMAFQ 77
           +K+N DAA  +      AG ++R+SSG +L           SV++AEAKA+YEG+ +A  
Sbjct: 142 IKINVDAALDVGRNRFSAGIVIRDSSGRILKAAALVFKGRTSVDIAEAKAIYEGILLATT 201

Query: 78  LDYSSLQVESDSLRLVRILRGDLEDILEVGAIVDSILCLVAGDPLFQVSFVPREGNRVAH 137
               SL +ESDSL +VR+  G++    +V  ++  I  L++ +    +S++PR  N VAH
Sbjct: 202 SGLQSLSIESDSLNVVRLCNGEISTRNDVFNVICDIQFLLSRERKISISYIPRSCNMVAH 261

[Close]

BLAST of Lcy04g002110 vs. NCBI nr
Match: XP_040361720.1 (uncharacterized protein LOC121049178 [Rosa chinensis])

HSP 1 Score: 75.1 bits (183), Expect = 5.3e-10
Identity = 40/120 (33.33%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 18  VKLNSDAAFSLDGAHVGAGFILRNSSGSVLFYGMQKLSMCLSVEVAEAKAMYEGVRMAFQ 77
           +K NSD +F       G G ++R+ +G+     M++L   +S   AE  A+YEGV++A  
Sbjct: 204 LKCNSDGSFLAAANRGGVGVVIRDHAGTFKAATMKQLDQVVSPFHAELLALYEGVKLAQA 263

Query: 78  LDYSSLQVESDSLRLVRILRGDLEDILEVGAIVDSILCLVAGDPLFQVSFVPREGNRVAH 137
           L Y  ++ E+D L LV  L+ +  D   +G +++ +  L+ G   + +SFVPR+ N +AH
Sbjct: 264 LQYDKVESETDCLLLVHALKQEATDCSNLGFMLEEVKELLRGHVHYMISFVPRDANMMAH 323

[Close]

BLAST of Lcy04g002110 vs. NCBI nr
Match: TXG71894.1 (hypothetical protein EZV62_000473 [Acer yangbiense])

HSP 1 Score: 74.7 bits (182), Expect = 7.0e-10
Identity = 40/120 (33.33%), Postives = 67/120 (55.83%), Query Frame = 0


Query: 18  VKLNSDAAFSLDGAHVGAGFILRNSSGSVLFYGMQKLSMCLSVEVAEAKAMYEGVRMAFQ 77
           +K+N DAA  +       G ++R+SSG +L       +   S ++AEAK +YEG+ +A  
Sbjct: 245 IKVNVDAALDVGRNKFSVGIVIRDSSGRILKSAALVFNGRTSTDIAEAKVIYEGLLLATS 304

Query: 78  LDYSSLQVESDSLRLVRILRGDLEDILEVGAIVDSILCLVAGDPLFQVSFVPREGNRVAH 137
                L +ESDSL +VR+  G++    +V  ++  I  L++ +    +S++PR  NRVAH
Sbjct: 305 SGLQPLSIESDSLNVVRLCNGEISTRNDVFNVICDIQFLLSRERKTSISYIPRSCNRVAH 364

[Close]

BLAST of Lcy04g002110 vs. NCBI nr
Match: TXG50387.1 (hypothetical protein EZV62_022911 [Acer yangbiense])

HSP 1 Score: 74.3 bits (181), Expect = 9.1e-10
Identity = 42/119 (35.29%), Postives = 63/119 (52.94%), Query Frame = 0


Query: 19  KLNSDAAFSLDGAHVGAGFILRNSSGSVLFYGMQKLSMCLSVEVAEAKAMYEGVRMAFQL 78
           K+N DA+F L     G G I+R+  GS +      +  C SVE+ EA+A  EG+ +A  +
Sbjct: 282 KINCDASFQLRSGKAGVGVIIRDYKGSAIAARSSPVLCCSSVEMLEAQACLEGIHLAIDI 341

Query: 79  DYSSLQVESDSLRLVRILRGDLEDILEVGAIVDSILCLVAGDPLFQVSFVPREGNRVAH 138
             S + +ESD+  ++++L        E+GAI+ + L L A   L     V RE N VAH
Sbjct: 342 GVSGVIIESDAASVIQLLSDQTVPRTELGAIIHTSLALGASVNLLSYVAVRREANSVAH 400

[Close]

BLAST of Lcy04g002110 vs. NCBI nr
Match: XP_021746406.1 (uncharacterized protein LOC110712252 [Chenopodium quinoa])

HSP 1 Score: 73.6 bits (179), Expect = 1.6e-09
Identity = 42/120 (35.00%), Postives = 66/120 (55.00%), Query Frame = 0


Query: 18   VKLNSDAAFSLDGAHVGAGFILRNSSGSVLFYGMQKLSMCLSVEVAEAKAMYEGVRMAFQ 77
            +K+N DAA     A VG G + RNS G++LF   +++  C    V EA A   GV +A +
Sbjct: 1212 IKINVDAAL-FQNAEVGVGVVARNSEGTILFTAAKRMQGCWDPAVIEAAAFCYGVELAKR 1271

Query: 78   LDYSSLQVESDSLRLVRILRGDLEDILEVGAIVDSILCLVAGDPLFQVSFVPREGNRVAH 137
             +Y+ + +ESD++ +V+ +R     +  V   VD+I+ ++     F  S V R GN VAH
Sbjct: 1272 FEYADIWMESDAINIVQKIRQHQLGLSYVHLFVDNIVKIIPNFNSFACSHVKRGGNTVAH 1330

[Close]

BLAST of Lcy04g002110 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 58.5 bits (140), Expect = 4.8e-09
Identity = 42/128 (32.81%), Postives = 62/128 (48.44%), Query Frame = 0


Query: 18  VKLNSDAAFSLDGAHVGAGFILRNSSGSVLFYGMQKLSMCLSVEVAEAKAMYEGVRMAFQ 77
           VK N+DA + L+    G G+ILRN SG VL+ G + L    +V  AE +A+   V    +
Sbjct: 145 VKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAELEALRWAVLTMSR 204

Query: 78  LDYSSLQVESDSLRLVRILRGD---------LEDILEVGAIVDSILCLVAGDPLFQVSFV 137
            +Y  +  ESD+  LV +L  D         LEDI ++    + +          +  F 
Sbjct: 205 FNYKRIIFESDAQALVNLLNSDDFWPTLQPALEDIQQLLHHFEEV----------KFEFT 262

[Close]

BLAST of Lcy04g002110 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 58.5 bits (140), Expect = 4.8e-09
Identity = 40/119 (33.61%), Postives = 60/119 (50.42%), Query Frame = 0


Query: 18  VKLNSDAAFSLDGAHVGAGFILRNSSGSVLFYGMQKLSMCLSVEVAEAKAMYEGVRMAFQ 77
           VK N+DA ++ D    G G++LRN  G V + G + L    SV  AE +AM   V    +
Sbjct: 428 VKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAMRWAVLSLSR 487

Query: 78  LDYSSLQVESDSLRLVRILRGDLEDILEVGAIVDSILCLVAGDPLFQVSFVPREGNRVA 137
             Y+ +  ESDS  L+ IL  D E    +   +  +  L++     +  F+PREGN +A
Sbjct: 488 FQYNYVIFESDSQVLIEILNND-EIWPSLKPTIQDLQRLLSQFTEVKFVFIPREGNTLA 545

[Close]

BLAST of Lcy04g002110 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 3.8e-06
Identity = 31/121 (25.62%), Postives = 58/121 (47.93%), Query Frame = 0


Query: 18  VKLNSDAAFSLDGAHVGAGFILRNSSGSVLFYGMQKLSMCLSVEVAEAKAMYEGVRMAFQ 77
           VK N DA F +       G+I+RN  G+ + +G  KL+   +   AE KA+   ++  + 
Sbjct: 334 VKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWI 393

Query: 78  LDYSSLQVESDSLRLVRILRGDLEDILEVGAIVDSILCLVAGDPLFQVSFVPREGNRVAH 137
             Y+ + +E D   L+ ++ G +     +   ++ I          Q  F+ R+GN++AH
Sbjct: 394 RGYTQVFMEGDCQTLINLING-ISFHSSLANHLEDISFWANKFASIQFGFIRRKGNKLAH 453

Query: 138 L 139
           +
Sbjct: 454 V 453

[Close]

BLAST of Lcy04g002110 vs. TAIR 10
Match: AT5G44470.1 (BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT3G23320.1); Has 74 Blast hits to 74 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 2.7e-04
Identity = 20/65 (30.77%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 34 GAGFILRNSSGSVLFYGMQKLSMCLSVEVAEAKAMYEGVRMAFQLDYSSLQVESDSLRLV 93
          G G+I+RNS G+ +  GM K      VE +E  A+   ++ ++ L Y  ++ + D+L ++
Sbjct: 33 GLGWIIRNSHGTFMECGMSKFQGRAPVEESECTALIWALQSSWNLGYIKIEFDGDNLSII 92

Query: 94 RILRG 99
          R++ G
Sbjct: 93 RLING 97

[Close]

BLAST of Lcy04g002110 vs. TAIR 10
Match: AT1G52990.1 (thioredoxin family protein )

HSP 1 Score: 42.0 bits (97), Expect = 4.7e-04
Identity = 32/119 (26.89%), Postives = 54/119 (45.38%), Query Frame = 0


Query: 18  VKLNSDAAFSLDGAHVGAGFILRNSSGSVLFYGMQKLSMCLSVEVAEAKAMYEGVRMAFQ 77
           VK N DA+        G G+++RNS G+VL  GM K    ++ E AE  A+   ++    
Sbjct: 48  VKCNYDASHHEGDVVSGLGWLIRNSQGTVLECGMGKFQGRMTPEEAECSALIWAIQATSA 107

Query: 78  LDYSSLQVESDSLRLVRILRGDLEDILEVGAIVDSILCLVAGDPLFQVSFVPREGNRVA 137
             Y+ +  E D+  + R++     D   +   +D+I   +      +  F  RE N+ A
Sbjct: 108 FGYTKVIFEGDNSNVNRLI-NTKSDNPRLKHYLDTIKSWIPSFTSTEFIFTHREQNQCA 165

The following BLAST results are available for this feature:

BLAST of Lcy04g002110 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy04g002110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5C7IFK3	6.2e-12	35.83	RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_009054 ...	[more]
A0A5C7IST2	3.4e-10	33.33	RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_000473 ...	[more]
A0A5C7H0P0	4.4e-10	35.29	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022911 PE=4 SV=1	[more]
V4RLS8	7.5e-10	33.61	RNase H domain-containing protein (Fragment) OS=Citrus clementina OX=85681 GN=CI...	[more]
A0A5C7GW84	9.8e-10	34.45	RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_024858 ...	[more]

BLAST of Lcy04g002110 vs. NCBI nr


Match Name	E-value	Identity	Description
TXG67779.1	1.3e-11	35.83	hypothetical protein EZV62_009054 [Acer yangbiense]	[more]
XP_040361720.1	5.3e-10	33.33	uncharacterized protein LOC121049178 [Rosa chinensis]	[more]
TXG71894.1	7.0e-10	33.33	hypothetical protein EZV62_000473 [Acer yangbiense]	[more]
TXG50387.1	9.1e-10	35.29	hypothetical protein EZV62_022911 [Acer yangbiense]	[more]
XP_021746406.1	1.6e-09	35.00	uncharacterized protein LOC110712252 [Chenopodium quinoa]	[more]

BLAST of Lcy04g002110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34320.1	4.8e-09	32.81	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT4G29090.1	4.8e-09	33.61	Ribonuclease H-like superfamily protein	[more]
AT3G09510.1	3.8e-06	25.62	Ribonuclease H-like superfamily protein	[more]
AT5G44470.1	2.7e-04	30.77	BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuc...	[more]
AT1G52990.1	4.7e-04	26.89	thioredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 15..139 e-value: 1.4E-9 score: 40.1
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 21..138 e-value: 6.3E-22 score: 77.7
None	No IPR available	PANTHER	PTHR47723	OS05G0353850 PROTEIN	coord: 17..137
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 20..137 e-value: 1.17136E-21 score: 81.5916
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 18..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g002110.1	Lcy04g002110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity