Lcy04g001730 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g001730
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	DNL-type domain-containing protein
Location	Chr04: 9811752 .. 9813806 (-)
RNA-Seq Expression	Lcy04g001730
Synteny	Lcy04g001730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTCATTCGTGTCCTCAAAAACTCTAGGCCCTGTCCTCGCGATATTTTTCGTGTCAAATTGGCTTCTGTTTTATCTCCTCTTTTCATTTTCATAGTCTTTTTTCTTTCTTTTTCCTTTTTTTGATTCTGATTCTGATTCTCAACTCCTCCCACAGAAGCTTCTCCTCTGCGATTTGCATCTCTCCGGTCGAGTTCTCGATTTCTCTGGCTATGGAGTCTCTAATCAACACTTCTTCTGTTGCGATCGTCTCCTCTTCTTCGTCTTTTCCTATATCTTCTCCCAACAAGTTGCTTCCTCTCAGATCTTTTCAAGTTCCGCACGCCTCGAAAGGTATTCATCTCCAAACTGTTTTTGAGTTTTTTTTTTTCTCTTCTATTTGTTTGCATCATTTCTTGATGAAATTTTTAATCGCTGTGTTGTCGAAGCAGTTGCTTGTGCTATCTGAATGATCCTGCTTATCATTTGATTTTGATTCGTCTTCGAAACAATTTATTGTGTTATTGCTTTGATCTTTCAATTGTCTGTTTAAGCCTTGGAATGTGTGCTTAGGTAACAAGAACGAATCTGATTCGCAGTCTGATTCTAAGAATATCAAGAACCTTCCAATTCTCAGTAAACGCCATCTCTCCCTTTCCCCCCTTTCAAAGGTATCCTCCCTGTATTATTGTTATTATTTTATTTTATTTTTTAAAAAAATTAATGCTCTCTTCCTTTTGTATCTGCAAATTTGAGATGATTAGGATTCATGGTATTTAGAGTTTTCTGCGAGATGATGTTTATGGATTGTTTTATACATACAACTGCTTGTTATGATCTCGTGGTTAAAACGAACCCAAAATCTAGAGAGGATTGCTTATTTAAATTTCTGTAAGATGAAAAATGATGATTCTGGAGCAAGAGAGTTCATGAACTGAACCATTATATAGGTGCCTGGCTTGAATCCTATTCATATTCAGCCATGGAGGATTATCAAAAATCAGTAGCCCAAGTGGCGTTTCAACATTGATGAAGGTTACTTCTCTATTGAAAAGAAAAGAATGCTATTCATAGTCTACATTATTAAGAATTAATTTAGATATATAGTCGTTTTGTACGCTCACTCGGTCTTATTGAAGCTTCCAGTAAAGTTTTCCTGTCTGCTTTCCTTTCTGCATTAGGATGTTGCAATGGGAGTGGTGCTTAGTGCTGCCACGGGAAGAGGGTGGACGACAGGGTCTGGCATGGAAGGCCCCTCAGCCCCGGCTGGGCTGGAGGCCAAATCAGGCACAGAGAATGTCTCCACTTTCCCATGGTCTCTTTTCACGAAATCTCCTCGGCGAAGAATGCTTGTGGCTTTTACTTGTAATATTTGTGGGCAACGAACGACACGGGCAATCAATCCCCATGCTTATACTGATGGCACTGTGTTTGTGCAGGTTAGATTTCATATTCATGGAATGAATTGATGGAAGTGCGTATTTGACCATTTGAGTTGATCTGCTTGAGTAGAAGCATTTAGTTTCCATTTTTTTTGTTTCGTTTTCTACTGAAATGGTTTCATTCAATGTTCTTTTGGGAAGAATTGGTGTCAAAGATATCATAATCTGAACAGGACACATTAATCTTTGAATTCAGCTATTGTAGTGGTTAGGTCCAGTAAAGTGCGTTACCTAAAGCAAGCTTAGGTAGACAATCTGATTTCAATTTACGGGGAAACAATTTACGAACTGACACAAAACTAATCGGCTTAGTCTTCTGTTTTGTTCTTGTAGTGTTGTGGATGCAATGCATACCACAAGCTCGTGGACAACTTGAACCTGTTTCATGAGATGAAATGCTATGTCAACCCGAGTTTTAACTATGGAAGTAATGGATGGGGCGACGTGAACTTTAAATATCTGGACATGGAAGAAGATGGAAGCGACGATATATTCCCTATACAATAAGGTAAATACTGTGCTCATGGAGTATGTACATTCTGGACTCAATCTGTAAAAGAATAATTACTTGTTATGTATATTGTTCTGTATATCAAATAATTACTTGTTATGTATATTGTTCTATATATCAAATA

mRNA sequence

AAGTCATTCGTGTCCTCAAAAACTCTAGGCCCTGTCCTCGCGATATTTTTCGTGTCAAATTGGCTTCTGTTTTATCTCCTCTTTTCATTTTCATAGTCTTTTTTCTTTCTTTTTCCTTTTTTTGATTCTGATTCTGATTCTCAACTCCTCCCACAGAAGCTTCTCCTCTGCGATTTGCATCTCTCCGGTCGAGTTCTCGATTTCTCTGGCTATGGAGTCTCTAATCAACACTTCTTCTGTTGCGATCGTCTCCTCTTCTTCGTCTTTTCCTATATCTTCTCCCAACAAGTTGCTTCCTCTCAGATCTTTTCAAGTTCCGCACGCCTCGAAAGGTAACAAGAACGAATCTGATTCGCAGTCTGATTCTAAGAATATCAAGAACCTTCCAATTCTCAGTAAACGCCATCTCTCCCTTTCCCCCCTTTCAAAGGATGTTGCAATGGGAGTGGTGCTTAGTGCTGCCACGGGAAGAGGGTGGACGACAGGGTCTGGCATGGAAGGCCCCTCAGCCCCGGCTGGGCTGGAGGCCAAATCAGGCACAGAGAATGTCTCCACTTTCCCATGGTCTCTTTTCACGAAATCTCCTCGGCGAAGAATGCTTGTGGCTTTTACTTGTAATATTTGTGGGCAACGAACGACACGGGCAATCAATCCCCATGCTTATACTGATGGCACTGTGTTTGTGCAGTGTTGTGGATGCAATGCATACCACAAGCTCGTGGACAACTTGAACCTGTTTCATGAGATGAAATGCTATGTCAACCCGAGTTTTAACTATGGAAGTAATGGATGGGGCGACGTGAACTTTAAATATCTGGACATGGAAGAAGATGGAAGCGACGATATATTCCCTATACAATAAGGTAAATACTGTGCTCATGGAGTATGTACATTCTGGACTCAATCTGTAAAAGAATAATTACTTGTTATGTATATTGTTCTGTATATCAAATAATTACTTGTTATGTATATTGTTCTATATATCAAATA

Coding sequence (CDS)

ATGGAGTCTCTAATCAACACTTCTTCTGTTGCGATCGTCTCCTCTTCTTCGTCTTTTCCTATATCTTCTCCCAACAAGTTGCTTCCTCTCAGATCTTTTCAAGTTCCGCACGCCTCGAAAGGTAACAAGAACGAATCTGATTCGCAGTCTGATTCTAAGAATATCAAGAACCTTCCAATTCTCAGTAAACGCCATCTCTCCCTTTCCCCCCTTTCAAAGGATGTTGCAATGGGAGTGGTGCTTAGTGCTGCCACGGGAAGAGGGTGGACGACAGGGTCTGGCATGGAAGGCCCCTCAGCCCCGGCTGGGCTGGAGGCCAAATCAGGCACAGAGAATGTCTCCACTTTCCCATGGTCTCTTTTCACGAAATCTCCTCGGCGAAGAATGCTTGTGGCTTTTACTTGTAATATTTGTGGGCAACGAACGACACGGGCAATCAATCCCCATGCTTATACTGATGGCACTGTGTTTGTGCAGTGTTGTGGATGCAATGCATACCACAAGCTCGTGGACAACTTGAACCTGTTTCATGAGATGAAATGCTATGTCAACCCGAGTTTTAACTATGGAAGTAATGGATGGGGCGACGTGAACTTTAAATATCTGGACATGGAAGAAGATGGAAGCGACGATATATTCCCTATACAATAA

Protein sequence

MESLINTSSVAIVSSSSSFPISSPNKLLPLRSFQVPHASKGNKNESDSQSDSKNIKNLPILSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEAKSGTENVSTFPWSLFTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMKCYVNPSFNYGSNGWGDVNFKYLDMEEDGSDDIFPIQ

Homology

[Close]

BLAST of Lcy04g001730 vs. ExPASy Swiss-Prot
Match: B3LPE4 (Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain RM11-1a) OX=285006 GN=ZIM17 PE=3 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 2.6e-06
Identity = 20/56 (35.71%), Postives = 33/56 (58.93%), Query Frame = 0


Query: 123 KSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHE 179
           K  + +M++AFTC  C  R++  ++  AY  GTV + C  C   H + D+L +FH+
Sbjct: 63  KVDKPKMMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHLKIFHD 118

[Close]

BLAST of Lcy04g001730 vs. ExPASy Swiss-Prot
Match: B5VQB0 (Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain AWRI1631) OX=545124 GN=ZIM17 PE=3 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 2.6e-06
Identity = 20/56 (35.71%), Postives = 33/56 (58.93%), Query Frame = 0


Query: 123 KSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHE 179
           K  + +M++AFTC  C  R++  ++  AY  GTV + C  C   H + D+L +FH+
Sbjct: 63  KVDKPKMMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHLKIFHD 118

[Close]

BLAST of Lcy04g001730 vs. ExPASy Swiss-Prot
Match: A6ZSH0 (Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=ZIM17 PE=3 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 2.6e-06
Identity = 20/56 (35.71%), Postives = 33/56 (58.93%), Query Frame = 0


Query: 123 KSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHE 179
           K  + +M++AFTC  C  R++  ++  AY  GTV + C  C   H + D+L +FH+
Sbjct: 63  KVDKPKMMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHLKIFHD 118

[Close]

BLAST of Lcy04g001730 vs. ExPASy Swiss-Prot
Match: P42844 (Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ZIM17 PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 2.6e-06
Identity = 20/56 (35.71%), Postives = 33/56 (58.93%), Query Frame = 0


Query: 123 KSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHE 179
           K  + +M++AFTC  C  R++  ++  AY  GTV + C  C   H + D+L +FH+
Sbjct: 63  KVDKPKMMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHLKIFHD 118

[Close]

BLAST of Lcy04g001730 vs. ExPASy Swiss-Prot
Match: Q9D113 (DNL-type zinc finger protein OS=Mus musculus OX=10090 GN=Dnlz PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 7.5e-06
Identity = 30/96 (31.25%), Postives = 44/96 (45.83%), Query Frame = 0


Query: 87  RGWTTG--SGMEGPSAPAGLEAKSGTENVSTFPWSLFTKSPRRRMLVAFTCNICGQRTTR 146
           RGW  G  SG    S+  G    +    V    + L            +TC +CG R+++
Sbjct: 40  RGWAWGWASGWRSSSSAPGSGRAAALGRVEADHYQL-----------VYTCKVCGTRSSK 99

Query: 147 AINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 181
            I+  AY  G V V C GC  +H + DNL+ F ++K
Sbjct: 100 RISKLAYHQGVVIVTCPGCQNHHIIADNLSWFSDLK 124

[Close]

BLAST of Lcy04g001730 vs. ExPASy TrEMBL
Match: A0A6J1JJL2 (uncharacterized protein LOC111486391 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486391 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.6e-112
Identity = 203/216 (93.98%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MESLINTSSVAIVSSSSSFPISSPNKLLPLRSFQVPHASKGNKNESDSQSDSKNIKNLPI 60
           MESLIN SS AIVSSSS+FPISSPN++LPLRSFQVPHASKGN+NESDSQSDSKNI+NLPI
Sbjct: 1   MESLINASSAAIVSSSSTFPISSPNRMLPLRSFQVPHASKGNENESDSQSDSKNIRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEAKSGTENVSTFPWSL 120
           LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPS+P GLEAKSGTENVSTFPWSL
Sbjct: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSSPVGLEAKSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTC ICGQRTTRAINPHAYTDGTVFVQCCGC+AYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCKICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK 180

Query: 181 CYVNPSFNYGSNGWGDVNFKYLDMEEDGSDDIFPIQ 217
           CYVNPSFNYGSNGWGDVNFKYLDMEEDGS+DIFP Q
Sbjct: 181 CYVNPSFNYGSNGWGDVNFKYLDMEEDGSNDIFPNQ 216

[Close]

BLAST of Lcy04g001730 vs. ExPASy TrEMBL
Match: A0A5D3D712 (Mitochondrial protein import protein ZIM17 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3037G00120 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.1e-111
Identity = 203/216 (93.98%), Postives = 209/216 (96.76%), Query Frame = 0


Query: 1   MESLINTSSVAIVSSSSSFPISSPNKLLPLRSFQVPHASKGNKNESDSQSDSKNIKNLPI 60
           MESLIN SS AIVSSSSSFPISSP + LPLRSFQVPHASKGN NESDSQSDS NI+NLPI
Sbjct: 1   MESLINASSAAIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSNNIRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEAKSGTENVSTFPWSL 120
           LSKRHLSLSPLSKDVAMG+VLSAATGRGWTTGSGMEGP APAGLEAKSGTENVSTFPWSL
Sbjct: 61  LSKRHLSLSPLSKDVAMGMVLSAATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180

Query: 181 CYVNPSFNYGSNGWGDVNFKYLDMEEDGSDDIFPIQ 217
           CY+NPSFNYGSNGWGDVNFKYLD+EEDG+DDIFPIQ
Sbjct: 181 CYINPSFNYGSNGWGDVNFKYLDVEEDGNDDIFPIQ 216

[Close]

BLAST of Lcy04g001730 vs. ExPASy TrEMBL
Match: A0A1S3BII6 (uncharacterized protein LOC103490262 OS=Cucumis melo OX=3656 GN=LOC103490262 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.1e-111
Identity = 203/216 (93.98%), Postives = 209/216 (96.76%), Query Frame = 0


Query: 1   MESLINTSSVAIVSSSSSFPISSPNKLLPLRSFQVPHASKGNKNESDSQSDSKNIKNLPI 60
           MESLIN SS AIVSSSSSFPISSP + LPLRSFQVPHASKGN NESDSQSDS NI+NLPI
Sbjct: 1   MESLINASSAAIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSNNIRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEAKSGTENVSTFPWSL 120
           LSKRHLSLSPLSKDVAMG+VLSAATGRGWTTGSGMEGP APAGLEAKSGTENVSTFPWSL
Sbjct: 61  LSKRHLSLSPLSKDVAMGMVLSAATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180

Query: 181 CYVNPSFNYGSNGWGDVNFKYLDMEEDGSDDIFPIQ 217
           CY+NPSFNYGSNGWGDVNFKYLD+EEDG+DDIFPIQ
Sbjct: 181 CYINPSFNYGSNGWGDVNFKYLDVEEDGNDDIFPIQ 216

[Close]

BLAST of Lcy04g001730 vs. ExPASy TrEMBL
Match: A0A6J1HYG2 (uncharacterized protein LOC111468074 OS=Cucurbita maxima OX=3661 GN=LOC111468074 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 4.0e-111
Identity = 199/216 (92.13%), Postives = 207/216 (95.83%), Query Frame = 0


Query: 1   MESLINTSSVAIVSSSSSFPISSPNKLLPLRSFQVPHASKGNKNESDSQSDSKNIKNLPI 60
           MESLIN SS AI+SSSSSFPISSPN++LPLRSFQVPHASKGN+NESDSQSDSKNI+NLPI
Sbjct: 76  MESLINASSAAIISSSSSFPISSPNRMLPLRSFQVPHASKGNENESDSQSDSKNIRNLPI 135

Query: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEAKSGTENVSTFPWSL 120
           LS+RHLSLSPLSKD AMGVVL AA GRGWTTGSGMEGP APAGLEA SGTENVSTFPWSL
Sbjct: 136 LSRRHLSLSPLSKDAAMGVVLGAAAGRGWTTGSGMEGPPAPAGLEANSGTENVSTFPWSL 195

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK
Sbjct: 196 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 255

Query: 181 CYVNPSFNYGSNGWGDVNFKYLDMEEDGSDDIFPIQ 217
           CYVNP FNYGSNGWGD+NFKYLDMEEDG+DD FPIQ
Sbjct: 256 CYVNPGFNYGSNGWGDLNFKYLDMEEDGNDDTFPIQ 291

[Close]

BLAST of Lcy04g001730 vs. ExPASy TrEMBL
Match: A0A0A0K614 (DNL-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G016610 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 6.9e-111
Identity = 200/216 (92.59%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MESLINTSSVAIVSSSSSFPISSPNKLLPLRSFQVPHASKGNKNESDSQSDSKNIKNLPI 60
           MESLIN SS  IVSSSSSFPISSP + LPLRSFQVPHASKGN NESDSQSDSKN +NLPI
Sbjct: 1   MESLINASSAGIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSKNTRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEAKSGTENVSTFPWSL 120
           LSKRHLSLSPLSKDVAMG+VLSAATGRGWTTGSGMEGP APAG+EAKSGTENVSTFPWSL
Sbjct: 61  LSKRHLSLSPLSKDVAMGMVLSAATGRGWTTGSGMEGPPAPAGMEAKSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180

Query: 181 CYVNPSFNYGSNGWGDVNFKYLDMEEDGSDDIFPIQ 217
           CY+NPSFNYGSNGWGDVNFKYLD+EEDG+DD+FPIQ
Sbjct: 181 CYINPSFNYGSNGWGDVNFKYLDVEEDGNDDVFPIQ 216

[Close]

BLAST of Lcy04g001730 vs. NCBI nr
Match: XP_022989271.1 (uncharacterized protein LOC111486391 isoform X2 [Cucurbita maxima])

HSP 1 Score: 414.1 bits (1063), Expect = 7.5e-112
Identity = 203/216 (93.98%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 1   MESLINTSSVAIVSSSSSFPISSPNKLLPLRSFQVPHASKGNKNESDSQSDSKNIKNLPI 60
           MESLIN SS AIVSSSS+FPISSPN++LPLRSFQVPHASKGN+NESDSQSDSKNI+NLPI
Sbjct: 1   MESLINASSAAIVSSSSTFPISSPNRMLPLRSFQVPHASKGNENESDSQSDSKNIRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEAKSGTENVSTFPWSL 120
           LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPS+P GLEAKSGTENVSTFPWSL
Sbjct: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSSPVGLEAKSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTC ICGQRTTRAINPHAYTDGTVFVQCCGC+AYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCKICGQRTTRAINPHAYTDGTVFVQCCGCSAYHKLVDNLNLFHEMK 180

Query: 181 CYVNPSFNYGSNGWGDVNFKYLDMEEDGSDDIFPIQ 217
           CYVNPSFNYGSNGWGDVNFKYLDMEEDGS+DIFP Q
Sbjct: 181 CYVNPSFNYGSNGWGDVNFKYLDMEEDGSNDIFPNQ 216

[Close]

BLAST of Lcy04g001730 vs. NCBI nr
Match: XP_008447918.1 (PREDICTED: uncharacterized protein LOC103490262 [Cucumis melo] >KAA0025115.1 Mitochondrial protein import protein ZIM17 [Cucumis melo var. makuwa] >TYK19358.1 Mitochondrial protein import protein ZIM17 [Cucumis melo var. makuwa])

HSP 1 Score: 412.5 bits (1059), Expect = 2.2e-111
Identity = 203/216 (93.98%), Postives = 209/216 (96.76%), Query Frame = 0


Query: 1   MESLINTSSVAIVSSSSSFPISSPNKLLPLRSFQVPHASKGNKNESDSQSDSKNIKNLPI 60
           MESLIN SS AIVSSSSSFPISSP + LPLRSFQVPHASKGN NESDSQSDS NI+NLPI
Sbjct: 1   MESLINASSAAIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSNNIRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEAKSGTENVSTFPWSL 120
           LSKRHLSLSPLSKDVAMG+VLSAATGRGWTTGSGMEGP APAGLEAKSGTENVSTFPWSL
Sbjct: 61  LSKRHLSLSPLSKDVAMGMVLSAATGRGWTTGSGMEGPPAPAGLEAKSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180

Query: 181 CYVNPSFNYGSNGWGDVNFKYLDMEEDGSDDIFPIQ 217
           CY+NPSFNYGSNGWGDVNFKYLD+EEDG+DDIFPIQ
Sbjct: 181 CYINPSFNYGSNGWGDVNFKYLDVEEDGNDDIFPIQ 216

[Close]

BLAST of Lcy04g001730 vs. NCBI nr
Match: XP_023511505.1 (uncharacterized protein LOC111776313 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 410.6 bits (1054), Expect = 8.3e-111
Identity = 199/216 (92.13%), Postives = 207/216 (95.83%), Query Frame = 0


Query: 1   MESLINTSSVAIVSSSSSFPISSPNKLLPLRSFQVPHASKGNKNESDSQSDSKNIKNLPI 60
           MESLIN SS AI+SSSSSFPISSPN++LPLRSFQVPHASKGN+NESDSQSDSKNI+NLPI
Sbjct: 1   MESLINASSAAIISSSSSFPISSPNRMLPLRSFQVPHASKGNENESDSQSDSKNIRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEAKSGTENVSTFPWSL 120
           LS+RHLSLSPLSKD AMGVVL AA GRGWTTGSGMEGP APAGLEA SGTENVSTFPWSL
Sbjct: 61  LSRRHLSLSPLSKDAAMGVVLGAAAGRGWTTGSGMEGPPAPAGLEANSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180

Query: 181 CYVNPSFNYGSNGWGDVNFKYLDMEEDGSDDIFPIQ 217
           CYVNP FNYGSNGWGD+NFKYLDMEEDG+DD FPIQ
Sbjct: 181 CYVNPGFNYGSNGWGDLNFKYLDMEEDGNDDTFPIQ 216

[Close]

BLAST of Lcy04g001730 vs. NCBI nr
Match: XP_022968890.1 (uncharacterized protein LOC111468074 [Cucurbita maxima])

HSP 1 Score: 410.6 bits (1054), Expect = 8.3e-111
Identity = 199/216 (92.13%), Postives = 207/216 (95.83%), Query Frame = 0


Query: 1   MESLINTSSVAIVSSSSSFPISSPNKLLPLRSFQVPHASKGNKNESDSQSDSKNIKNLPI 60
           MESLIN SS AI+SSSSSFPISSPN++LPLRSFQVPHASKGN+NESDSQSDSKNI+NLPI
Sbjct: 76  MESLINASSAAIISSSSSFPISSPNRMLPLRSFQVPHASKGNENESDSQSDSKNIRNLPI 135

Query: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEAKSGTENVSTFPWSL 120
           LS+RHLSLSPLSKD AMGVVL AA GRGWTTGSGMEGP APAGLEA SGTENVSTFPWSL
Sbjct: 136 LSRRHLSLSPLSKDAAMGVVLGAAAGRGWTTGSGMEGPPAPAGLEANSGTENVSTFPWSL 195

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK
Sbjct: 196 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 255

Query: 181 CYVNPSFNYGSNGWGDVNFKYLDMEEDGSDDIFPIQ 217
           CYVNP FNYGSNGWGD+NFKYLDMEEDG+DD FPIQ
Sbjct: 256 CYVNPGFNYGSNGWGDLNFKYLDMEEDGNDDTFPIQ 291

[Close]

BLAST of Lcy04g001730 vs. NCBI nr
Match: XP_004144863.1 (uncharacterized protein LOC101212325 [Cucumis sativus] >KGN43276.1 hypothetical protein Csa_020164 [Cucumis sativus])

HSP 1 Score: 409.8 bits (1052), Expect = 1.4e-110
Identity = 200/216 (92.59%), Postives = 208/216 (96.30%), Query Frame = 0


Query: 1   MESLINTSSVAIVSSSSSFPISSPNKLLPLRSFQVPHASKGNKNESDSQSDSKNIKNLPI 60
           MESLIN SS  IVSSSSSFPISSP + LPLRSFQVPHASKGN NESDSQSDSKN +NLPI
Sbjct: 1   MESLINASSAGIVSSSSSFPISSPIRNLPLRSFQVPHASKGNDNESDSQSDSKNTRNLPI 60

Query: 61  LSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEAKSGTENVSTFPWSL 120
           LSKRHLSLSPLSKDVAMG+VLSAATGRGWTTGSGMEGP APAG+EAKSGTENVSTFPWSL
Sbjct: 61  LSKRHLSLSPLSKDVAMGMVLSAATGRGWTTGSGMEGPPAPAGMEAKSGTENVSTFPWSL 120

Query: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180
           FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK
Sbjct: 121 FTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHEMK 180

Query: 181 CYVNPSFNYGSNGWGDVNFKYLDMEEDGSDDIFPIQ 217
           CY+NPSFNYGSNGWGDVNFKYLD+EEDG+DD+FPIQ
Sbjct: 181 CYINPSFNYGSNGWGDVNFKYLDVEEDGNDDVFPIQ 216

[Close]

BLAST of Lcy04g001730 vs. TAIR 10
Match: AT5G27280.1 (Zim17-type zinc finger protein )

HSP 1 Score: 205.3 bits (521), Expect = 5.0e-53
Identity = 123/225 (54.67%), Postives = 147/225 (65.33%), Query Frame = 0


Query: 1   MESLINTSSVAIVSSSSS-FPISSPNKLL----PLRSFQVPHASKGNKNESDSQSDSKNI 60
           ME+   +S+  I+SSSSS   I SP K      P R  ++  ++K    + D Q    N 
Sbjct: 1   MEATSLSSAATIISSSSSPLSIFSPKKRTDSSPPPRIVRL--SNKKEDKDYDPQHSESNS 60

Query: 61  KNLPILSKRHLSLSPLSKDVAMGVVLSAATGRGWTTGSGMEGPSAPAGLEAKSGTENVST 120
            +L            LS D AMG+VLSAA+ +GWTTGSGMEGPS P    AK+ T+ VST
Sbjct: 61  SSL-------FRNRTLSNDEAMGLVLSAASVKGWTTGSGMEGPSLP----AKTDTDTVST 120

Query: 121 FPWSLFTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNL 180
           FPWSLFTKSPRRRM VAFTCN+CGQRTTRAINPHAYTDGTVFVQCCGCN +HKLVDNLNL
Sbjct: 121 FPWSLFTKSPRRRMRVAFTCNVCGQRTTRAINPHAYTDGTVFVQCCGCNVFHKLVDNLNL 180

Query: 181 FHEMKCYV-NPSFNYGSNGWGDVNFKYLDMEED----GSDDIFPI 216
           FHE+K YV + SF+Y    W        D E+D     S+D+FP+
Sbjct: 181 FHEVKYYVSSSSFDYTDAKWDVSGLNLFDDEDDDNAGDSNDVFPL 212

[Close]

BLAST of Lcy04g001730 vs. TAIR 10
Match: AT1G68730.1 (Zim17-type zinc finger protein )

HSP 1 Score: 79.3 bits (194), Expect = 4.1e-15
Identity = 37/60 (61.67%), Postives = 41/60 (68.33%), Query Frame = 0


Query: 119 SLFTKSPRRRMLVAFTCNICGQRTTRAINPHAYTDGTVFVQCCGCNAYHKLVDNLNLFHE 178
           S+  K PRR + V FTCN CG+RT R IN HAY  G VFVQC GC  +HKLVDNL L  E
Sbjct: 96  SIDIKLPRRSLQVEFTCNSCGERTKRLINRHAYEKGLVFVQCAGCLKHHKLVDNLGLIVE 155

The following BLAST results are available for this feature:

BLAST of Lcy04g001730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B3LPE4	2.6e-06	35.71	Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain R...	[more]
B5VQB0	2.6e-06	35.71	Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain A...	[more]
A6ZSH0	2.6e-06	35.71	Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain Y...	[more]
P42844	2.6e-06	35.71	Mitochondrial protein import protein ZIM17 OS=Saccharomyces cerevisiae (strain A...	[more]
Q9D113	7.5e-06	31.25	DNL-type zinc finger protein OS=Mus musculus OX=10090 GN=Dnlz PE=1 SV=1	[more]

BLAST of Lcy04g001730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JJL2	3.6e-112	93.98	uncharacterized protein LOC111486391 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5D3D712	1.1e-111	93.98	Mitochondrial protein import protein ZIM17 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BII6	1.1e-111	93.98	uncharacterized protein LOC103490262 OS=Cucumis melo OX=3656 GN=LOC103490262 PE=...	[more]
A0A6J1HYG2	4.0e-111	92.13	uncharacterized protein LOC111468074 OS=Cucurbita maxima OX=3661 GN=LOC111468074...	[more]
A0A0A0K614	6.9e-111	92.59	DNL-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G016610 PE...	[more]

BLAST of Lcy04g001730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022989271.1	7.5e-112	93.98	uncharacterized protein LOC111486391 isoform X2 [Cucurbita maxima]	[more]
XP_008447918.1	2.2e-111	93.98	PREDICTED: uncharacterized protein LOC103490262 [Cucumis melo] >KAA0025115.1 Mit...	[more]
XP_023511505.1	8.3e-111	92.13	uncharacterized protein LOC111776313 [Cucurbita pepo subsp. pepo]	[more]
XP_022968890.1	8.3e-111	92.13	uncharacterized protein LOC111468074 [Cucurbita maxima]	[more]
XP_004144863.1	1.4e-110	92.59	uncharacterized protein LOC101212325 [Cucumis sativus] >KGN43276.1 hypothetical ...	[more]

BLAST of Lcy04g001730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27280.1	5.0e-53	54.67	Zim17-type zinc finger protein	[more]
AT1G68730.1	4.1e-15	61.67	Zim17-type zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007853	Zinc finger, DNL-type	PFAM	PF05180	zf-DNL	coord: 131..180 e-value: 3.1E-16 score: 59.1
IPR007853	Zinc finger, DNL-type	PROSITE	PS51501	ZF_DNL	coord: 124..216 score: 14.55151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..56
None	No IPR available	PANTHER	PTHR20922:SF15	A_TM021B04.14 PROTEIN	coord: 1..215
IPR024158	Mitochondrial import protein TIM15	PANTHER	PTHR20922	UNCHARACTERIZED	coord: 1..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g001730.1	Lcy04g001730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0030150	protein import into mitochondrial matrix
biological_process	GO:0050821	protein stabilization
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0008270	zinc ion binding