Lcy04g000430 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTGTTCAAATAACACAGTAGAAGATTGTAGAGGAATGAGTTGTATATTTGGTGGAGATATGGATGAGGAAGAAAACCACAGCAGGCCGCATGATGAAATTGCTTTCACCAGATTGAGTTATATGCATATTAGCAAGTTACCAAGAGTAGAGAGCTTTTACGTTTACCCTGGAAAATGCAAACTTGCGTTCCCATGCTTGGAGGAGTTGGTGGTAGATGAATGCCCAACAATGAAGATGTTTTCTCATGGACCTCTAACCACACCTAAGTTGAAGCTTTTGGAGAGAGATGGAAGTAAAGTCCAGCTGCCTCCATCAAATCATCATATAAATCACATTTTTTCTCTACTTTGA ATGTCTTGTTCAAATAACACAGTAGAAGATTGTAGAGGAATGAGTTGTATATTTGGTGGAGATATGGATGAGGAAGAAAACCACAGCAGGCCGCATGATGAAATTGCTTTCACCAGATTGAGTTATATGCATATTAGCAAGTTACCAAGAGTAGAGAGCTTTTACGTTTACCCTGGAAAATGCAAACTTGCGTTCCCATGCTTGGAGGAGTTGGTGGTAGATGAATGCCCAACAATGAAGATGTTTTCTCATGGACCTCTAACCACACCTAAGTTGAAGCTTTTGGAGAGAGATGGAAGTAAAGTCCAGCTGCCTCCATCAAATCATCATATAAATCACATTTTTTCTCTACTTTGA ATGTCTTGTTCAAATAACACAGTAGAAGATTGTAGAGGAATGAGTTGTATATTTGGTGGAGATATGGATGAGGAAGAAAACCACAGCAGGCCGCATGATGAAATTGCTTTCACCAGATTGAGTTATATGCATATTAGCAAGTTACCAAGAGTAGAGAGCTTTTACGTTTACCCTGGAAAATGCAAACTTGCGTTCCCATGCTTGGAGGAGTTGGTGGTAGATGAATGCCCAACAATGAAGATGTTTTCTCATGGACCTCTAACCACACCTAAGTTGAAGCTTTTGGAGAGAGATGGAAGTAAAGTCCAGCTGCCTCCATCAAATCATCATATAAATCACATTTTTTCTCTACTTTGA MSCSNNTVEDCRGMSCIFGGDMDEEENHSRPHDEIAFTRLSYMHISKLPRVESFYVYPGKCKLAFPCLEELVVDECPTMKMFSHGPLTTPKLKLLERDGSKVQLPPSNHHINHIFSLL Homology
BLAST of Lcy04g000430 vs. ExPASy TrEMBL
Match: A0A0A0LTN4 (NB-ARC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G433370 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 5.8e-11 Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 0
BLAST of Lcy04g000430 vs. ExPASy TrEMBL
Match: A0A1S3CHN4 (disease resistance protein At4g27190-like OS=Cucumis melo OX=3656 GN=LOC103501064 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 2.2e-10 Identity = 37/85 (43.53%), Postives = 51/85 (60.00%), Query Frame = 0
BLAST of Lcy04g000430 vs. ExPASy TrEMBL
Match: A0A067D5L7 (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g0385762mg PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.6e-08 Identity = 35/90 (38.89%), Postives = 54/90 (60.00%), Query Frame = 0
BLAST of Lcy04g000430 vs. ExPASy TrEMBL
Match: A0A2H5QR03 (NB-ARC domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_253590 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.6e-08 Identity = 35/90 (38.89%), Postives = 54/90 (60.00%), Query Frame = 0
BLAST of Lcy04g000430 vs. ExPASy TrEMBL
Match: A0A1S3CU02 (probable disease resistance protein At1g12280 OS=Cucumis melo OX=3656 GN=LOC103504526 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.6e-08 Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = 0
BLAST of Lcy04g000430 vs. NCBI nr
Match: XP_038890209.1 (probable disease resistance protein At4g27220 [Benincasa hispida]) HSP 1 Score: 85.1 bits (209), Expect = 4.4e-13 Identity = 44/108 (40.74%), Postives = 68/108 (62.96%), Query Frame = 0
BLAST of Lcy04g000430 vs. NCBI nr
Match: XP_011650062.1 (probable disease resistance protein At5g63020 [Cucumis sativus] >KAE8652346.1 hypothetical protein Csa_022345 [Cucumis sativus]) HSP 1 Score: 77.0 bits (188), Expect = 1.2e-10 Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 0
BLAST of Lcy04g000430 vs. NCBI nr
Match: XP_038888954.1 (uncharacterized protein LOC120078722 [Benincasa hispida]) HSP 1 Score: 77.0 bits (188), Expect = 1.2e-10 Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 0
BLAST of Lcy04g000430 vs. NCBI nr
Match: XP_008462777.1 (PREDICTED: disease resistance protein At4g27190-like [Cucumis melo]) HSP 1 Score: 75.1 bits (183), Expect = 4.5e-10 Identity = 37/85 (43.53%), Postives = 51/85 (60.00%), Query Frame = 0
BLAST of Lcy04g000430 vs. NCBI nr
Match: XP_038902150.1 (disease resistance protein At4g27190-like [Benincasa hispida]) HSP 1 Score: 72.0 bits (175), Expect = 3.8e-09 Identity = 39/105 (37.14%), Postives = 59/105 (56.19%), Query Frame = 0
BLAST of Lcy04g000430 vs. TAIR 10
Match: AT4G10780.1 (LRR and NB-ARC domains-containing disease resistance protein ) HSP 1 Score: 43.9 bits (102), Expect = 1.0e-04 Identity = 20/56 (35.71%), Postives = 31/56 (55.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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