Lcy03g020320 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g020320
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	MYND-type domain-containing protein
Location	Chr03: 53694389 .. 53696042 (-)
RNA-Seq Expression	Lcy03g020320
Synteny	Lcy03g020320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTACATTTCTCATACCAGAGAGATACAACACAACACACCGCCGCTTCTGAACTTCAAACCTCCTCTTTTCTCTCTACGCATGCAACCAACACGATTCCAATTTGCAAGATGATTTCTGCCAAGAGGCCAAGATCATGCAGTAAATCCGCCGGAAAATCTGATCTCTTCGATGTCTTGCCGGACGATCTCGTCATTCACCTTCTCTGCCGCCTCGCCTCCTCCGCCTCCTCCCCTTCCCACCTTCTCAGCCTTCTCTTCACGTAATTTGATTATCATGCTTCTTTTTCCTTTTCCTCTGTTTTCTTTTTGGTTTGCGATTTTGTTCGTTTCTAAATTTCTTGTCGTTTATGGAGATGATTTTGCAGATGCAAGAGGTTGAATCGCTTGGTTCTTCATCCTTTGGTGTTGTCTAAAGCTGGACCGAAGGCGTTGGCGTTTAAGACGGACAACTGGTGTGATTCCGCTCACCGATTTCTCAAACGCTGCGTTGACGCCGGTAATTCGGAAGCAAGTTACATGCTCGGAATGGTTAGTTCTTTTGTTCCTTTCTTGAAAAAGATGAAGAAATTGTTACGGTTTATGGACTGGGGGATGATGTCTGTGTTTTTTCCCCTGTAGATCCGATTTTATTGCTTGAGAAATCGAGGAAGTGGAGCTTCTTTAATGGCGAAAGCGGCGATTAAATCGCACGCTCCGGCGCTCTACTCGCTCGCCGTGATTCAATTCAACGGCAGCGGTGGCTCTAAGAGCGATAAGGATCTCCAGGCGGGCGTAGCCCTATGTGCTCGAGCCGCTTTTCTCGGCCATGTGGACGCACTTCGCGAACTCGGCCATTGCCTTCAAGACGGTTACGGCGTGCGACAGAACGCCAACGAAGGCCGCCGGCTCCTCATCCAAGCCAACGCCCGGGAGCTTGCTTCCGTTCTACTCTCCTCCTCGCGGATATGGCGACCGCGCCACCACCAGTTCGGCGACGTCGTCGATTTGACGGCGTCGAGTTGTTCGTTGCTGAGCGATTTCGGCTGTAACGTTCCGGCGGCGGAGGCGCATCCAGTGAACCGGTTTTTGAGAGAGTGGTTTGAGTCGGAGAGTGGAGTGGAGGCGCGTGTGGGGCTGAGACTATGCTCGCACGGCGGATGCGGTCGGGCGGAGACTCGGGCGCACGAGTTCCGACGGTGCTCAGTTTGCGGGACTGTAAATTACTGTTCAAGAGGATGCCAAGCGCAGGACTGGAAAGTCCGGCATAAAGAGGAGTGTAGAGCCCTTGAGCGGTGGCGGGATGCGGATGGTAACATTGCCGGCGGCATGTTTGATATTGTAGAAGAGCCTGAGGACCCCGACATCGTGGGTATTGTATAATCATAATACCGCTGTAATTTTAGTTACTTATGGATATAACTGTAATTTTATATACAATTCTTTTTCTTTTTCTTTTTTCCTTTTCTGTTTTTTGGGGTTTTAAATCATTTTTAAAGAAAAATGGGTCATATGGTACCGGGAGATTTAATCGGTAGCAGTGATAACCGACAAAGTTTTTAAACTTTAAACTTGGAAGGAAATTTTCCTTGTTAAATTAAATTATGCATGTTTTCGTAAGAACAATACTTATACGTAAGGATCTCCTAAGTAATTAATAATATTTGCAATTCTGAA

mRNA sequence

GTTACATTTCTCATACCAGAGAGATACAACACAACACACCGCCGCTTCTGAACTTCAAACCTCCTCTTTTCTCTCTACGCATGCAACCAACACGATTCCAATTTGCAAGATGATTTCTGCCAAGAGGCCAAGATCATGCAGTAAATCCGCCGGAAAATCTGATCTCTTCGATGTCTTGCCGGACGATCTCGTCATTCACCTTCTCTGCCGCCTCGCCTCCTCCGCCTCCTCCCCTTCCCACCTTCTCAGCCTTCTCTTCACATGCAAGAGGTTGAATCGCTTGGTTCTTCATCCTTTGGTGTTGTCTAAAGCTGGACCGAAGGCGTTGGCGTTTAAGACGGACAACTGGTGTGATTCCGCTCACCGATTTCTCAAACGCTGCGTTGACGCCGGTAATTCGGAAGCAAGTTACATGCTCGGAATGATCCGATTTTATTGCTTGAGAAATCGAGGAAGTGGAGCTTCTTTAATGGCGAAAGCGGCGATTAAATCGCACGCTCCGGCGCTCTACTCGCTCGCCGTGATTCAATTCAACGGCAGCGGTGGCTCTAAGAGCGATAAGGATCTCCAGGCGGGCGTAGCCCTATGTGCTCGAGCCGCTTTTCTCGGCCATGTGGACGCACTTCGCGAACTCGGCCATTGCCTTCAAGACGGTTACGGCGTGCGACAGAACGCCAACGAAGGCCGCCGGCTCCTCATCCAAGCCAACGCCCGGGAGCTTGCTTCCGTTCTACTCTCCTCCTCGCGGATATGGCGACCGCGCCACCACCAGTTCGGCGACGTCGTCGATTTGACGGCGTCGAGTTGTTCGTTGCTGAGCGATTTCGGCTGTAACGTTCCGGCGGCGGAGGCGCATCCAGTGAACCGGTTTTTGAGAGAGTGGTTTGAGTCGGAGAGTGGAGTGGAGGCGCGTGTGGGGCTGAGACTATGCTCGCACGGCGGATGCGGTCGGGCGGAGACTCGGGCGCACGAGTTCCGACGGTGCTCAGTTTGCGGGACTGTAAATTACTGTTCAAGAGGATGCCAAGCGCAGGACTGGAAAGTCCGGCATAAAGAGGAGTGTAGAGCCCTTGAGCGGTGGCGGGATGCGGATGGTAACATTGCCGGCGGCATGTTTGATATTGTAGAAGAGCCTGAGGACCCCGACATCGTGGGTATTGTATAATCATAATACCGCTGTAATTTTAGTTACTTATGGATATAACTGTAATTTTATATACAATTCTTTTTCTTTTTCTTTTTTCCTTTTCTGTTTTTTGGGGTTTTAAATCATTTTTAAAGAAAAATGGGTCATATGGTACCGGGAGATTTAATCGGTAGCAGTGATAACCGACAAAGTTTTTAAACTTTAAACTTGGAAGGAAATTTTCCTTGTTAAATTAAATTATGCATGTTTTCGTAAGAACAATACTTATACGTAAGGATCTCCTAAGTAATTAATAATATTTGCAATTCTGAA

Coding sequence (CDS)

ATGATTTCTGCCAAGAGGCCAAGATCATGCAGTAAATCCGCCGGAAAATCTGATCTCTTCGATGTCTTGCCGGACGATCTCGTCATTCACCTTCTCTGCCGCCTCGCCTCCTCCGCCTCCTCCCCTTCCCACCTTCTCAGCCTTCTCTTCACATGCAAGAGGTTGAATCGCTTGGTTCTTCATCCTTTGGTGTTGTCTAAAGCTGGACCGAAGGCGTTGGCGTTTAAGACGGACAACTGGTGTGATTCCGCTCACCGATTTCTCAAACGCTGCGTTGACGCCGGTAATTCGGAAGCAAGTTACATGCTCGGAATGATCCGATTTTATTGCTTGAGAAATCGAGGAAGTGGAGCTTCTTTAATGGCGAAAGCGGCGATTAAATCGCACGCTCCGGCGCTCTACTCGCTCGCCGTGATTCAATTCAACGGCAGCGGTGGCTCTAAGAGCGATAAGGATCTCCAGGCGGGCGTAGCCCTATGTGCTCGAGCCGCTTTTCTCGGCCATGTGGACGCACTTCGCGAACTCGGCCATTGCCTTCAAGACGGTTACGGCGTGCGACAGAACGCCAACGAAGGCCGCCGGCTCCTCATCCAAGCCAACGCCCGGGAGCTTGCTTCCGTTCTACTCTCCTCCTCGCGGATATGGCGACCGCGCCACCACCAGTTCGGCGACGTCGTCGATTTGACGGCGTCGAGTTGTTCGTTGCTGAGCGATTTCGGCTGTAACGTTCCGGCGGCGGAGGCGCATCCAGTGAACCGGTTTTTGAGAGAGTGGTTTGAGTCGGAGAGTGGAGTGGAGGCGCGTGTGGGGCTGAGACTATGCTCGCACGGCGGATGCGGTCGGGCGGAGACTCGGGCGCACGAGTTCCGACGGTGCTCAGTTTGCGGGACTGTAAATTACTGTTCAAGAGGATGCCAAGCGCAGGACTGGAAAGTCCGGCATAAAGAGGAGTGTAGAGCCCTTGAGCGGTGGCGGGATGCGGATGGTAACATTGCCGGCGGCATGTTTGATATTGTAGAAGAGCCTGAGGACCCCGACATCGTGGGTATTGTATAA

Protein sequence

MISAKRPRSCSKSAGKSDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVLHPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNANEGRRLLIQANARELASVLLSSSRIWRPRHHQFGDVVDLTASSCSLLSDFGCNVPAAEAHPVNRFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVNYCSRGCQAQDWKVRHKEECRALERWRDADGNIAGGMFDIVEEPEDPDIVGIV

Homology

[Close]

BLAST of Lcy03g020320 vs. ExPASy Swiss-Prot
Match: Q9FYF9 (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 6.3e-119
Identity = 210/318 (66.04%), Postives = 245/318 (77.04%), Query Frame = 0


Query: 17  SDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVLHPLVLSKAGPKALAFK 76
           +DL D +PDDLVI +LC+L S++  P+  +++L TCKRL  L ++P+VLS+  PKA+A K
Sbjct: 41  ADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVK 100

Query: 77  TDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSL 136
             NW + +HRFLKRCVDAG+ EA Y LGMIRFYCL+NRG+GASLMAKAAI SHAPALYSL
Sbjct: 101 AHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSL 160

Query: 137 AVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNANEGRRLL 196
           AVIQFNGSGGSK+DKDL+AGVALCARAAFLGHVDALRELGHCLQDGYGV QN +EGRR L
Sbjct: 161 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFL 220

Query: 197 IQANARELASVL---LSSSRIWRPRHHQFGDVV-DLTASSCSLLSDFGCNVPAAEAHPVN 256
           +QANARELA+VL   + +   W         VV +    +C LLSDFGCNVPA E HP N
Sbjct: 221 VQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPAN 280

Query: 257 RFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVNYCSRGCQAQDWKV 316
           RFL +WF    G     GLRLCSH GCGR ETR HEFRRCSVCG VNYCSR CQA DWK+
Sbjct: 281 RFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKL 340

Query: 317 RHKEECRALERW-RDADG 330
           RHK +C  ++RW  + DG
Sbjct: 341 RHKMDCAPVQRWLEEGDG 358

[Close]

BLAST of Lcy03g020320 vs. ExPASy Swiss-Prot
Match: Q9FK27 (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 7.0e-110
Identity = 209/325 (64.31%), Postives = 243/325 (74.77%), Query Frame = 0


Query: 20  FDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVLHPLVLSKAGPKALAFKTDN 79
           F+ L DDL+I +L +LA+SASSPS  L++L TCKRLNRL LHPLVLSKAG + LA   + 
Sbjct: 22  FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEK 81

Query: 80  WCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVI 139
           W DS+H+FLK CV+AGN +ASY LGMIRFYCL+N  SGASLMAKAAIKSHAPALYSL+VI
Sbjct: 82  WSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVI 141

Query: 140 QFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNANEGRRLLIQA 199
           QFNGSGGSK+DK+L+AGVALCAR+A+LGHVDALRELGHCLQDGYGV ++ +EGRRLLIQA
Sbjct: 142 QFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLLIQA 201

Query: 200 NARELASVLLSSSRIWRPRHHQFGDVVDLTASSCSLLSDFGCNVPAAEAHPVNRFLREWF 259
           NARELA  L S   +      + GD           L+D    VP  E HPVNRFL+EWF
Sbjct: 202 NARELACSLRSYLSL------KSGD-------ENETLTDLSV-VPVQEIHPVNRFLKEWF 261

Query: 260 ESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVNYCSRGCQAQDWKVRHKEECR 319
            S   V+   GLR+CSHGGCGR ETRAHEFRRCSVCG VNYCSRGCQA DW+ +HK EC 
Sbjct: 262 -SSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWRAKHKVECT 321

Query: 320 ALERWRDADGNIAGGMFDIVEEPED 345
            L+ W  A   I      +  E +D
Sbjct: 322 PLDLWVAAAAEIGDDGEAVAVEIDD 331

[Close]

BLAST of Lcy03g020320 vs. ExPASy Swiss-Prot
Match: Q09415 (SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=4 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 3.9e-04
Identity = 19/44 (43.18%), Postives = 28/44 (63.64%), Query Frame = 0


Query: 279 CGRAETRAHEFRRCSVCGTVNYCSRGCQAQDWKVRHKEECRALE 323
           C +  T   E ++CS C  + YCS+ CQ  DWK+ HK EC+A++
Sbjct: 26  CNQCLTSMAELKKCSACRRLAYCSQECQRADWKL-HKVECKAIK 68

[Close]

BLAST of Lcy03g020320 vs. ExPASy TrEMBL
Match: A0A6J1E1B7 (F-box protein At1g67340-like OS=Cucurbita moschata OX=3662 GN=LOC111429904 PE=4 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.8e-169
Identity = 295/352 (83.81%), Postives = 318/352 (90.34%), Query Frame = 0


Query: 1   MISAKRPRSCSKSAGKSDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVL 60
           MISAKRPR+C   A +SDLFDVLPDDL+IHLLCRLASSASSPS LL+ L TCKRLNRLVL
Sbjct: 1   MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKA A + + WCDSAHRFLKRCVDAGNSEASY LGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNANEGRRLLIQANARELASVLLSSSRIWRPRHHQFGDVVDLTASSCSLLSDFG 240
           DGYGVR+N +EGRRLLIQANARELA+VLLSSSR+ + RHHQFG++ DLTA+ CSLLSDFG
Sbjct: 181 DGYGVRRNTDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 240

Query: 241 CNVPAAEAHPVNRFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVNY 300
           C+ PA E HPVN FLREWFESE GV ARVGLRLCSHGGCGR ETR HEFRRCS+CGTVNY
Sbjct: 241 CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 300

Query: 301 CSRGCQAQDWKVRHKEECRALERWRDAD-GNIAGGMFDIVEEPEDPDIVGIV 352
           CSRGCQAQDWKVRHKEEC A++RW+DA+  N  GGMF+ VEE ED ++VG V
Sbjct: 301 CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVGTV 352

[Close]

BLAST of Lcy03g020320 vs. ExPASy TrEMBL
Match: A0A6J1JFU9 (F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111484746 PE=4 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 4.9e-167
Identity = 290/352 (82.39%), Postives = 317/352 (90.06%), Query Frame = 0


Query: 1   MISAKRPRSCSKSAGKSDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVL 60
           M SAKRPR+C   A +SDLFDVLPDDL+IHLLCRLASSASSPS LL+LL TCKRLNRLVL
Sbjct: 1   MSSAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKA A + + WCDSAHRFLKRC DAGNSEASY LGMIRFYCL NRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCADAGNSEASYTLGMIRFYCLTNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNANEGRRLLIQANARELASVLLSSSRIWRPRHHQFGDVVDLTASSCSLLSDFG 240
           DGYGVR+N++EGRRLLIQANARELA+VLLSSSR+ + RHHQFG++ DLTA+ CSLLSDFG
Sbjct: 181 DGYGVRRNSDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 240

Query: 241 CNVPAAEAHPVNRFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVNY 300
           C+ PA E HPVN FLREWFESE GV  RVGLRLCSHGGCGR ETR HEFRRCS+CGTVNY
Sbjct: 241 CDFPATEPHPVNLFLREWFESERGVAGRVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 300

Query: 301 CSRGCQAQDWKVRHKEECRALERWRDADGNIAGG-MFDIVEEPEDPDIVGIV 352
           CSRGCQ+QDWK+RHKEEC A++RW+DA+ + AGG MF+ VEE ED ++VG V
Sbjct: 301 CSRGCQSQDWKIRHKEECTAVQRWQDAEVDNAGGVMFNAVEEVEDANVVGTV 352

[Close]

BLAST of Lcy03g020320 vs. ExPASy TrEMBL
Match: A0A5D3BGS7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00550 PE=4 SV=1)

HSP 1 Score: 593.2 bits (1528), Expect = 7.1e-166
Identity = 295/353 (83.57%), Postives = 313/353 (88.67%), Query Frame = 0


Query: 1   MISAKRPRSCSKSAGKSDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVL 60
           MIS KRPR+       SDLFDVLPDDL+IHLLC LA+SASSPS LL+LL TCKRLNRLVL
Sbjct: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKA A +  NWCDS+HRFLKRCVDAGNSEASY LGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNANEGRRLLIQANARELASVLLSSSRIW-RPRHHQFGDVVDLTASSCSLLSDF 240
           DGYGVRQN++EGRRLL+QANARELA+VLLSSS IW + RH+Q G++ DLTA+ CSLLSDF
Sbjct: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240

Query: 241 GCNVPAAEAHPVNRFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVN 300
           GCNVPA E HPVN FLREWFESE  V AR GLRLCSH GCGRAETR HEFRRCSVCGTVN
Sbjct: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300

Query: 301 YCSRGCQAQDWKVRHKEECRALERWRDADGNIAGGMFDIVEEPEDP-DIVGIV 352
           YCSRGCQAQDWKVRHKEEC  ++RWRD D N AG MFDIVEE ED  +IVGIV
Sbjct: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIVEEVEDANNIVGIV 353

[Close]

BLAST of Lcy03g020320 vs. ExPASy TrEMBL
Match: A0A1S3CLL0 (F-box protein At1g67340-like OS=Cucumis melo OX=3656 GN=LOC103502322 PE=4 SV=1)

HSP 1 Score: 593.2 bits (1528), Expect = 7.1e-166
Identity = 295/353 (83.57%), Postives = 313/353 (88.67%), Query Frame = 0


Query: 1   MISAKRPRSCSKSAGKSDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVL 60
           MIS KRPR+       SDLFDVLPDDL+IHLLC LA+SASSPS LL+LL TCKRLNRLVL
Sbjct: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCHLAASASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKA A +  NWCDS+HRFLKRCVDAGNSEASY LGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNANEGRRLLIQANARELASVLLSSSRIW-RPRHHQFGDVVDLTASSCSLLSDF 240
           DGYGVRQN++EGRRLL+QANARELA+VLLSSS IW + RH+Q G++ DLTA+ CSLLSDF
Sbjct: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240

Query: 241 GCNVPAAEAHPVNRFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVN 300
           GCNVPA E HPVN FLREWFESE  V AR GLRLCSH GCGRAETR HEFRRCSVCGTVN
Sbjct: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300

Query: 301 YCSRGCQAQDWKVRHKEECRALERWRDADGNIAGGMFDIVEEPEDP-DIVGIV 352
           YCSRGCQAQDWKVRHKEEC  ++RWRD D N AG MFDIVEE ED  +IVGIV
Sbjct: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNAGEMFDIVEEVEDANNIVGIV 353

[Close]

BLAST of Lcy03g020320 vs. ExPASy TrEMBL
Match: A0A5A7UPI5 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00550 PE=4 SV=1)

HSP 1 Score: 592.4 bits (1526), Expect = 1.2e-165
Identity = 295/353 (83.57%), Postives = 313/353 (88.67%), Query Frame = 0


Query: 1   MISAKRPRSCSKSAGKSDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVL 60
           MIS KRPR+       SDLFDVLPDDL+IHLLCRLA+SASSPS LL+LL TCKRLNRLVL
Sbjct: 1   MISVKRPRTRRNFTADSDLFDVLPDDLLIHLLCRLAASASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKA A +  NWCDS+HRFLKRCVDAGNSEASY LGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMQNWCDSSHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNANEGRRLLIQANARELASVLLSSSRIW-RPRHHQFGDVVDLTASSCSLLSDF 240
           DGYGVRQN++EGRRLL+QANARELA+VLLSSS IW + RH+Q G++ DLTA+ CSLLSDF
Sbjct: 181 DGYGVRQNSDEGRRLLVQANARELATVLLSSSSIWQQQRHNQSGNLPDLTATRCSLLSDF 240

Query: 241 GCNVPAAEAHPVNRFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVN 300
           GCNVPA E HPVN FLREWFESE  V AR GLRLCSH GCGRAETR HEFRRCSVCGTVN
Sbjct: 241 GCNVPAPEPHPVNLFLREWFESEGEVAARGGLRLCSHSGCGRAETRPHEFRRCSVCGTVN 300

Query: 301 YCSRGCQAQDWKVRHKEECRALERWRDADGNIAGGMFDIVEEPEDP-DIVGIV 352
           YCSRGCQAQDWKVRHKEEC  ++RWRD D N A  MFDIVEE ED  +IVGIV
Sbjct: 301 YCSRGCQAQDWKVRHKEECTTVQRWRDEDANNADEMFDIVEEVEDANNIVGIV 353

[Close]

BLAST of Lcy03g020320 vs. NCBI nr
Match: KAG7023063.1 (F-box protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 607.1 bits (1564), Expect = 9.9e-170
Identity = 295/352 (83.81%), Postives = 320/352 (90.91%), Query Frame = 0


Query: 1   MISAKRPRSCSKSAGKSDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVL 60
           MISAKRPR+C   A +SDLFDVLPDDL+IHLLCRLASSASSPS LL+LL TCKRLNRLVL
Sbjct: 1   MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKA A + + WCDSAHRFLKRCVDAGNSEASY LGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSK+DKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKNDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNANEGRRLLIQANARELASVLLSSSRIWRPRHHQFGDVVDLTASSCSLLSDFG 240
           DGYGVR+N++EGRRLLIQANARELA+VLLSSSR+ + RHHQFG++ DLTA+ CSLLSDFG
Sbjct: 181 DGYGVRRNSDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 240

Query: 241 CNVPAAEAHPVNRFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVNY 300
           C+ PA E HPVN FLREWFESE GV ARVGLRLCSHGGCGR ETR HEFRRCS+CGTVNY
Sbjct: 241 CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 300

Query: 301 CSRGCQAQDWKVRHKEECRALERWRDAD-GNIAGGMFDIVEEPEDPDIVGIV 352
           CSRGCQAQDWKVRHKEEC A++RW+DA+  N  GGMF+ VEE ED ++VG V
Sbjct: 301 CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVGTV 352

[Close]

BLAST of Lcy03g020320 vs. NCBI nr
Match: KAG6589385.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 607.1 bits (1564), Expect = 9.9e-170
Identity = 295/352 (83.81%), Postives = 320/352 (90.91%), Query Frame = 0


Query: 1   MISAKRPRSCSKSAGKSDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVL 60
           MISAKRPR+C   A +SDLFDVLPDDL+IHLLCRLASSASSPS LL+LL TCKRLNRLVL
Sbjct: 73  MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNLLLTCKRLNRLVL 132

Query: 61  HPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKA A + + WCDSAHRFLKRCVDAGNSEASY LGMIRFYCLRNRGSGASL
Sbjct: 133 HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 192

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSK+DKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 193 MAKAAIKSHAPALYSLAVIQFNGSGGSKNDKDLQAGVALCARAAFLGHVDALRELGHCLQ 252

Query: 181 DGYGVRQNANEGRRLLIQANARELASVLLSSSRIWRPRHHQFGDVVDLTASSCSLLSDFG 240
           DGYGVR+N++EGRRLLIQANARELA+VLLSSSR+ + RHHQFG++ DLTA+ CSLLSDFG
Sbjct: 253 DGYGVRRNSDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 312

Query: 241 CNVPAAEAHPVNRFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVNY 300
           C+ PA E HPVN FLREWFESE GV ARVGLRLCSHGGCGR ETR HEFRRCS+CGTVNY
Sbjct: 313 CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 372

Query: 301 CSRGCQAQDWKVRHKEECRALERWRDAD-GNIAGGMFDIVEEPEDPDIVGIV 352
           CSRGCQAQDWKVRHKEEC A++RW+DA+  N  GGMF+ VEE ED ++VG V
Sbjct: 373 CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVGTV 424

[Close]

BLAST of Lcy03g020320 vs. NCBI nr
Match: XP_023516460.1 (F-box protein At1g67340-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 606.7 bits (1563), Expect = 1.3e-169
Identity = 295/352 (83.81%), Postives = 320/352 (90.91%), Query Frame = 0


Query: 1   MISAKRPRSCSKSAGKSDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVL 60
           MISAKRPR+C   A +SDLFDVLPDDL+IHLLCRLASSASSPS LL+LL TCKRLNRLVL
Sbjct: 1   MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKA A + + WCDSAHRFLKRCVDAGNSEASY LGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNANEGRRLLIQANARELASVLLSSSRIWRPRHHQFGDVVDLTASSCSLLSDFG 240
           DGYGVR+N++EGRRLLIQANARELA+VLLSSSR+ + RHHQFG++ DLTA+ CSLLSDFG
Sbjct: 181 DGYGVRRNSDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 240

Query: 241 CNVPAAEAHPVNRFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVNY 300
           C+ PA E HPVN FLREWFESE GV ARVGLRLCSHGGCGR ETR HEFRRCS+CGTVNY
Sbjct: 241 CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 300

Query: 301 CSRGCQAQDWKVRHKEECRALERWRDAD-GNIAGGMFDIVEEPEDPDIVGIV 352
           CSRGCQAQDWKVRHKEEC A++RW+DA+  N  GG+F+ VEE ED ++VG V
Sbjct: 301 CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGIFNAVEEVEDANVVGTV 352

[Close]

BLAST of Lcy03g020320 vs. NCBI nr
Match: XP_022921747.1 (F-box protein At1g67340-like [Cucurbita moschata])

HSP 1 Score: 605.1 bits (1559), Expect = 3.7e-169
Identity = 295/352 (83.81%), Postives = 318/352 (90.34%), Query Frame = 0


Query: 1   MISAKRPRSCSKSAGKSDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVL 60
           MISAKRPR+C   A +SDLFDVLPDDL+IHLLCRLASSASSPS LL+ L TCKRLNRLVL
Sbjct: 1   MISAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNPLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKA A + + WCDSAHRFLKRCVDAGNSEASY LGMIRFYCLRNRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCVDAGNSEASYTLGMIRFYCLRNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNANEGRRLLIQANARELASVLLSSSRIWRPRHHQFGDVVDLTASSCSLLSDFG 240
           DGYGVR+N +EGRRLLIQANARELA+VLLSSSR+ + RHHQFG++ DLTA+ CSLLSDFG
Sbjct: 181 DGYGVRRNTDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 240

Query: 241 CNVPAAEAHPVNRFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVNY 300
           C+ PA E HPVN FLREWFESE GV ARVGLRLCSHGGCGR ETR HEFRRCS+CGTVNY
Sbjct: 241 CDFPATEPHPVNLFLREWFESERGVAARVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 300

Query: 301 CSRGCQAQDWKVRHKEECRALERWRDAD-GNIAGGMFDIVEEPEDPDIVGIV 352
           CSRGCQAQDWKVRHKEEC A++RW+DA+  N  GGMF+ VEE ED ++VG V
Sbjct: 301 CSRGCQAQDWKVRHKEECTAVQRWQDAEVDNAGGGMFNAVEEVEDANVVGTV 352

[Close]

BLAST of Lcy03g020320 vs. NCBI nr
Match: XP_022987090.1 (F-box protein At1g67340-like [Cucurbita maxima])

HSP 1 Score: 597.0 bits (1538), Expect = 1.0e-166
Identity = 290/352 (82.39%), Postives = 317/352 (90.06%), Query Frame = 0


Query: 1   MISAKRPRSCSKSAGKSDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVL 60
           M SAKRPR+C   A +SDLFDVLPDDL+IHLLCRLASSASSPS LL+LL TCKRLNRLVL
Sbjct: 1   MSSAKRPRTCRNFAAESDLFDVLPDDLLIHLLCRLASSASSPSDLLNLLLTCKRLNRLVL 60

Query: 61  HPLVLSKAGPKALAFKTDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASL 120
           HPLVLSKAGPKA A + + WCDSAHRFLKRC DAGNSEASY LGMIRFYCL NRGSGASL
Sbjct: 61  HPLVLSKAGPKAFAVRMEKWCDSAHRFLKRCADAGNSEASYTLGMIRFYCLTNRGSGASL 120

Query: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180
           MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ
Sbjct: 121 MAKAAIKSHAPALYSLAVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQ 180

Query: 181 DGYGVRQNANEGRRLLIQANARELASVLLSSSRIWRPRHHQFGDVVDLTASSCSLLSDFG 240
           DGYGVR+N++EGRRLLIQANARELA+VLLSSSR+ + RHHQFG++ DLTA+ CSLLSDFG
Sbjct: 181 DGYGVRRNSDEGRRLLIQANARELAAVLLSSSRVRQQRHHQFGNLPDLTATRCSLLSDFG 240

Query: 241 CNVPAAEAHPVNRFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVNY 300
           C+ PA E HPVN FLREWFESE GV  RVGLRLCSHGGCGR ETR HEFRRCS+CGTVNY
Sbjct: 241 CDFPATEPHPVNLFLREWFESERGVAGRVGLRLCSHGGCGRPETRPHEFRRCSICGTVNY 300

Query: 301 CSRGCQAQDWKVRHKEECRALERWRDADGNIAGG-MFDIVEEPEDPDIVGIV 352
           CSRGCQ+QDWK+RHKEEC A++RW+DA+ + AGG MF+ VEE ED ++VG V
Sbjct: 301 CSRGCQSQDWKIRHKEECTAVQRWQDAEVDNAGGVMFNAVEEVEDANVVGTV 352

[Close]

BLAST of Lcy03g020320 vs. TAIR 10
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 428.7 bits (1101), Expect = 4.5e-120
Identity = 210/318 (66.04%), Postives = 245/318 (77.04%), Query Frame = 0


Query: 17  SDLFDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVLHPLVLSKAGPKALAFK 76
           +DL D +PDDLVI +LC+L S++  P+  +++L TCKRL  L ++P+VLS+  PKA+A K
Sbjct: 41  ADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVK 100

Query: 77  TDNWCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSL 136
             NW + +HRFLKRCVDAG+ EA Y LGMIRFYCL+NRG+GASLMAKAAI SHAPALYSL
Sbjct: 101 AHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSL 160

Query: 137 AVIQFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNANEGRRLL 196
           AVIQFNGSGGSK+DKDL+AGVALCARAAFLGHVDALRELGHCLQDGYGV QN +EGRR L
Sbjct: 161 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFL 220

Query: 197 IQANARELASVL---LSSSRIWRPRHHQFGDVV-DLTASSCSLLSDFGCNVPAAEAHPVN 256
           +QANARELA+VL   + +   W         VV +    +C LLSDFGCNVPA E HP N
Sbjct: 221 VQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPAN 280

Query: 257 RFLREWFESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVNYCSRGCQAQDWKV 316
           RFL +WF    G     GLRLCSH GCGR ETR HEFRRCSVCG VNYCSR CQA DWK+
Sbjct: 281 RFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKL 340

Query: 317 RHKEECRALERW-RDADG 330
           RHK +C  ++RW  + DG
Sbjct: 341 RHKMDCAPVQRWLEEGDG 358

[Close]

BLAST of Lcy03g020320 vs. TAIR 10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 398.7 bits (1023), Expect = 5.0e-111
Identity = 209/325 (64.31%), Postives = 243/325 (74.77%), Query Frame = 0


Query: 20  FDVLPDDLVIHLLCRLASSASSPSHLLSLLFTCKRLNRLVLHPLVLSKAGPKALAFKTDN 79
           F+ L DDL+I +L +LA+SASSPS  L++L TCKRLNRL LHPLVLSKAG + LA   + 
Sbjct: 22  FEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHPLVLSKAGTQTLAVTAEK 81

Query: 80  WCDSAHRFLKRCVDAGNSEASYMLGMIRFYCLRNRGSGASLMAKAAIKSHAPALYSLAVI 139
           W DS+H+FLK CV+AGN +ASY LGMIRFYCL+N  SGASLMAKAAIKSHAPALYSL+VI
Sbjct: 82  WSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMAKAAIKSHAPALYSLSVI 141

Query: 140 QFNGSGGSKSDKDLQAGVALCARAAFLGHVDALRELGHCLQDGYGVRQNANEGRRLLIQA 199
           QFNGSGGSK+DK+L+AGVALCAR+A+LGHVDALRELGHCLQDGYGV ++ +EGRRLLIQA
Sbjct: 142 QFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDGYGVPRDVSEGRRLLIQA 201

Query: 200 NARELASVLLSSSRIWRPRHHQFGDVVDLTASSCSLLSDFGCNVPAAEAHPVNRFLREWF 259
           NARELA  L S   +      + GD           L+D    VP  E HPVNRFL+EWF
Sbjct: 202 NARELACSLRSYLSL------KSGD-------ENETLTDLSV-VPVQEIHPVNRFLKEWF 261

Query: 260 ESESGVEARVGLRLCSHGGCGRAETRAHEFRRCSVCGTVNYCSRGCQAQDWKVRHKEECR 319
            S   V+   GLR+CSHGGCGR ETRAHEFRRCSVCG VNYCSRGCQA DW+ +HK EC 
Sbjct: 262 -SSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWRAKHKVECT 321

Query: 320 ALERWRDADGNIAGGMFDIVEEPED 345
            L+ W  A   I      +  E +D
Sbjct: 322 PLDLWVAAAAEIGDDGEAVAVEIDD 331

[Close]

BLAST of Lcy03g020320 vs. TAIR 10
Match: AT2G24640.1 (ubiquitin-specific protease 19 )

HSP 1 Score: 45.4 bits (106), Expect = 1.1e-04
Identity = 19/41 (46.34%), Postives = 25/41 (60.98%), Query Frame = 0


Query: 279 CGRAETRAHEFRRCSVCGTVNYCSRGCQAQDWKVRHKEECR 320
           CG+A T     ++CS C +V YCS  CQ  DWK  HK +C+
Sbjct: 67  CGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKCK 102

[Close]

BLAST of Lcy03g020320 vs. TAIR 10
Match: AT5G65450.1 (ubiquitin-specific protease 17 )

HSP 1 Score: 43.1 bits (100), Expect = 5.3e-04
Identity = 17/30 (56.67%), Postives = 20/30 (66.67%), Query Frame = 0


Query: 291 RCSVCGTVNYCSRGCQAQDWKVRHKEECRA 321
           RCS C +V YCS  CQ   W+  HKEECR+
Sbjct: 67  RCSQCKSVRYCSSKCQILHWRRGHKEECRS 96

[Close]

BLAST of Lcy03g020320 vs. TAIR 10
Match: AT1G17110.1 (ubiquitin-specific protease 15 )

HSP 1 Score: 42.7 bits (99), Expect = 6.9e-04
Identity = 17/32 (53.12%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 291 RCSVCGTVNYCSRGCQAQDWKVRHKEECRALE 323
           RCS C +V YCS  CQ   W+V HK+EC  +E
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

The following BLAST results are available for this feature:

BLAST of Lcy03g020320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYF9	6.3e-119	66.04	F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1	[more]
Q9FK27	7.0e-110	64.31	F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1	[more]
Q09415	3.9e-04	43.18	SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=...	[more]

BLAST of Lcy03g020320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E1B7	1.8e-169	83.81	F-box protein At1g67340-like OS=Cucurbita moschata OX=3662 GN=LOC111429904 PE=4 ...	[more]
A0A6J1JFU9	4.9e-167	82.39	F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111484746 PE=4 SV...	[more]
A0A5D3BGS7	7.1e-166	83.57	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00550 ...	[more]
A0A1S3CLL0	7.1e-166	83.57	F-box protein At1g67340-like OS=Cucumis melo OX=3656 GN=LOC103502322 PE=4 SV=1	[more]
A0A5A7UPI5	1.2e-165	83.57	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00550 ...	[more]

BLAST of Lcy03g020320 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023063.1	9.9e-170	83.81	F-box protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6589385.1	9.9e-170	83.81	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023516460.1	1.3e-169	83.81	F-box protein At1g67340-like [Cucurbita pepo subsp. pepo]	[more]
XP_022921747.1	3.7e-169	83.81	F-box protein At1g67340-like [Cucurbita moschata]	[more]
XP_022987090.1	1.0e-166	82.39	F-box protein At1g67340-like [Cucurbita maxima]	[more]

BLAST of Lcy03g020320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67340.1	4.5e-120	66.04	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT5G50450.1	5.0e-111	64.31	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT2G24640.1	1.1e-04	46.34	ubiquitin-specific protease 19	[more]
AT5G65450.1	5.3e-04	56.67	ubiquitin-specific protease 17	[more]
AT1G17110.1	6.9e-04	53.13	ubiquitin-specific protease 15	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 72..260 e-value: 2.8E-18 score: 68.4
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 279..318 e-value: 1.2E-7 score: 31.6
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 276..318 score: 11.127352
None	No IPR available	GENE3D	6.10.140.2220		coord: 261..323 e-value: 3.3E-11 score: 44.7
None	No IPR available	PANTHER	PTHR46758:SF9	HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN	coord: 1..331
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 73..200
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 274..323
IPR044508	F-box protein At5g50450/At1g67340-like	PANTHER	PTHR46758	MYND DOMAIN-CONTAINING	coord: 1..331
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 11..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g020320.1	Lcy03g020320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding