Lcy03g019880 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAGAGCATTTCGACATTCTCTATCACTTCCGCTTCTGTACAGAGCATAACAATGGAAGCTATGTCGCTTCCTTCTCTGAATTCTCTTACAATTTCCTGTTCTAATTTGCAGAAAGGGAGTTTCGCCAACTTTTCCAGACGACTGCATCATTGTAACTTCTATGAACAATCCACCTTAAAGTTCAGGCCCCTTCATGGCACTCATCAATATGTATGTAATTCTATACCCTTTTTCCAGTTTTGGTAGAATTTGATTCTTTTCTTGGAAACCATTAAAGAAACCCAGAAAATAAATGAAAGATTGCTGTCTTGGCCTTGAGTGGCGATTGATTGGAAATTGTGGCTCTCGGTGTATTTGCTGGTCTTATTTCCTTCCATGAACCATTTGTTTCTATAATGTCAATGTTTTGTCCAGCATTTCAATGTTGTCAAAATGCTAAGTGATGGTGAAGACTATGAGCTGAAGCAAATGAGGGACATGGCTGCAGCTAAAAAGAGATGGGATTCTCTGGTCGGTACCAACTGTATACTCTGTAATTGTATTTCTTTTATTTGCTAGCTGAACTTAAGCTAACTCGCACTTCTGAATCATACCATTCAGTTGAAAATAATTATGGGTAGTGACTTCAATCAGTGCTGTCACTCAGATGTTCTTTGGGTGTGTATGTACTAGTTACTCTATATTGATTGTTAGAGCAAATGTATCTAGCTTGAAACAGTGGTTTGGGATTTGGGGTTCAGCTCAATTTCGAATATTAACAAGTAATATGGTATTTATGTTGATTATTAAAAAATATGTGCATTATGCCTGGATCGATTAGTCATACTCTCTGAGGTTGAACTCTTCAACCACATTGTTTCTTAACTGCATTATTTAGATTTTCTAAGTTGTTCTTTCAAACTTTTTGGTAGTTTGATTAATAAATGTGTGCTGTTTATTTTTTACTAATCATTTAAATGTACAGATCCGGGAAGGCAAAGTGAAAGTTCTGATGCCAAGGGAAGCTGGTTATGCAATTCAGCTATCTGATAAGACATTGCTCGATGTGCGTCCTTCTACAGAACACAAAAAGGTAGACTACTGTATTGTTTGTGATCTTACACTCATTAACAAAAATCTCACTGAGTGGATCCCTGGAAGTTTTGTTTACTTTTGATTGACGCTTGCAGTGGAGGCCACATGAAAAAGTAACGACTCAATTTTCATCTTATGTTTCTGTGTGATACATTTGTAATGGTTCTTAAGGGGCTTCAATACTAGTAGATTCTATTGTTGAAGGTGTAGTCCACGTTATGCTCAGTAGTTTTAGTGGCACGTCTGAACTAGTTCTTAGCGCAAAATTGTTGATATGGCTTTTGCCAACTTTCACTCGCTATCTAGGGATTTTATGATCTATACATCTTCATATTTATTCATTGTTTGACTCTTGAACTTATGTTTCTCCCATGTTTTGAAGGCATGGGTTAAAGGCTCAACATGGATCCCTATTTTTGATGTTGATGACAAACTTGATCCGGGAAATCTTTCTCGAAAGGTCACAAGCTTCATGATGGGTACCATGGAACTCTTGCTATCTTTTCTTTAAAGACCAAAATCTAGTTCTCTGGTTGTCATCTTTTGCTGCCTTCCATTCAGAGACAACAAGTTACTTTAATTAATTTCCTTCTCAAGATTGCTAATAACATTAGTTAATCAGGTTAATGGCTCGAATAGTTAATGGGATTTTTATTTTTTTATTTCTTTTCGTCGAGCTATTTTGGCAGTTGTTCCCTTACGTTGTTCTTATATTTTCCCTAGGGGGTTGGTGGAGTGGTGTGCCTACAGTGTCCTACAATAGGTATAACACTGGTCGTAGCGATTTTTGGTCTTTTTGTTAATTTGTGCAATCCATATTTACTTTTTTCTTTGCCTGTCCTTAACCAGCCGATTCTTGTCAGAAGTTCAAGAGAAGTTTCCAAAAGATGCTGACCTTATTCTTGCATGCCAAAAAGGATTGAGGTAACCTCCTGTCTCTGATTGGGCTTGGATGAAGCATCTGTAGATAATCGATGCTGAATTGTAAACTGAGATTGTAACTTGGGTTATAACGAATTGCTTTATTTTCTGTAACTCCTAATGTAATCATGATATTCTGACTTCCATGTAATTAATGAAGAAAAATTTGCTCAGTTAGCTCTAGTTGCAATAAATTATACTGAACCGAGCAATAAGCAGTGGGTTAATGTCATGATAAAACATCTAGCGAAGTCAAAAGATTACACACATTGTTATTTAACATGAAATCATGAATAATCTTCTAGGATATCTCGCATCTAGCGTTGGGTAATGTTATCATAAAAAAACAATTTACTAGAGTGTGATATTACTTTTCTTTGTATCGGACTATCAGTAAAATAATGAACCAATGATATTATTAATTACTTCAAAAGACCAAATTGTTAGTAATTTATATTCTTGGCCGGGTTTCTTTCATCTAAACAATATTTTTGGAAGGTCCCTAGCTGCATGCGAGCTCCTCTACAATGCTGGTTACAAAAACCTTTTCTGGGTTCAAGGCGGTCTAGACTCAGCTGAAGAAGAGGTATCAAGACTTTGACTTTGAAGTTTCTGCATCCTCTCTGTTTATGCTTTCTGCTGTCTACAGTTTCTTTGCAGTTAATCCAGTCTGTAAACGTAAAATTTGGCAATGTCTATCATTTACCTGGAACAGGATCTTGTCAGAGAAGGTCCTCAGCCTCTAAAATTTGCTGGGATTGGTGGGCTTTCAGAATTCCTTGGGTAACAGCTGATTTTAACCTATTTTCTCCTTGTAACATTTTGTATACTTATTAAATCTCCTATGAAGTTCTTTGTTAGGCATAGTAATGCTACTTATTTCAAAGCACAAAAGAGGACATTTGAAATAAATCTAATTTACTTTGAAACTGTCTGTCTCTCTCTGTCCTCTGACTCACTTTCCCTATGACTGTCAGTTGGACCGATCAACAAAGGGTGGCAGGCGCGAAAGAAGGTTGGGGTTATCGATTGGTTTACTCTGCTCGTCTGGTAACGTTTCACCTTGATGTCTTAGTTAACTGGTTTGGAGTTCCATCTTAAACTTCTCTCCTTCAACATCATGTTTAAATATCTTGGCACAGGTTGCAGTCTTTCTTGCTGTTGATGCTCTATTTATAGGTGCTCAGCAATTGGGCCGTTATATTCAGGAATTACGGTCTCACTAAGTTCACCAACTGGGGTTGGTGTAGTAGGATGATGAAAGACATGAAAGAGTAAGGTCTGAAGTTTTGGGTAGAGAGTAGATAGTTCTGTGTGATGGGGATGTTTGGAATCAATGATATCTCTTAGGAGATGGGCTATTCTCTGTTCTAGTTCTCATTTCTCAAGCAAAACTACCCATCTTGCTATTTTTGCAGTACTAGGGAAGTAGAGATTTCAAGTTGGAATTTACCATCTGAACAAGTTTTTCATGAGGATTGAGCAATAACATGTTATTGTACATAACTCTTGAGTGTTTCTGTTAAGATAGTCCATTAAGATGAAAGCTCAGGCCTATTCAAGTTCCTTTACAGGCGAATATTTGGCTTTTATTTCGTTATTACTGAGTTTAATATAGGAGTTTTTTTCTCTAGGCCTCGCTCATGTTCTCTTAATATAATAAAAGTACTTACTATTTAATCTCGCTAATGTTATTACTGAGTTCAATATAGGAGTTTTTTTTCCCTAGGCCTATTCAAGTTTTTTTTAATCTCTCTAGTTTTTATTCTTTAAAATTACTTTCTATTTAATCTTTTTTTCTTAAAACTCTCTGCTCTATTTTTTTC TAAGAGCATTTCGACATTCTCTATCACTTCCGCTTCTGTACAGAGCATAACAATGGAAGCTATGTCGCTTCCTTCTCTGAATTCTCTTACAATTTCCTGTTCTAATTTGCAGAAAGGGAGTTTCGCCAACTTTTCCAGACGACTGCATCATTGTAACTTCTATGAACAATCCACCTTAAAGTTCAGGCCCCTTCATGGCACTCATCAATATCATTTCAATGTTGTCAAAATGCTAAGTGATGGTGAAGACTATGAGCTGAAGCAAATGAGGGACATGGCTGCAGCTAAAAAGAGATGGGATTCTCTGATCCGGGAAGGCAAAGTGAAAGTTCTGATGCCAAGGGAAGCTGGTTATGCAATTCAGCTATCTGATAAGACATTGCTCGATGTGCGTCCTTCTACAGAACACAAAAAGGCATGGGTTAAAGGCTCAACATGGATCCCTATTTTTGATGTTGATGACAAACTTGATCCGGGAAATCTTTCTCGAAAGGTCACAAGCTTCATGATGGGGGGTTGGTGGAGTGGTGTGCCTACAGTGTCCTACAATAGCCGATTCTTGTCAGAAGTTCAAGAGAAGTTTCCAAAAGATGCTGACCTTATTCTTGCATGCCAAAAAGGATTGAGGTCCCTAGCTGCATGCGAGCTCCTCTACAATGCTGGTTACAAAAACCTTTTCTGGGTTCAAGGCGGTCTAGACTCAGCTGAAGAAGAGGATCTTGTCAGAGAAGGTCCTCAGCCTCTAAAATTTGCTGGGATTGGTGGGCTTTCAGAATTCCTTGGTTGGACCGATCAACAAAGGGTGGCAGGCGCGAAAGAAGGTTGGGGTTATCGATTGGTTTACTCTGCTCGTCTGGTTGCAGTCTTTCTTGCTGTTGATGCTCTATTTATAGGTGCTCAGCAATTGGGCCGTTATATTCAGGAATTACGGTCTCACTAAGTTCACCAACTGGGGTTGGTGTAGTAGGATGATGAAAGACATGAAAGAGTAAGGTCTGAAGTTTTGGGTAGAGAGTAGATAGTTCTGTGTGATGGGGATGTTTGGAATCAATGATATCTCTTAGGAGATGGGCTATTCTCTGTTCTAGTTCTCATTTCTCAAGCAAAACTACCCATCTTGCTATTTTTGCAGTACTAGGGAAGTAGAGATTTCAAGTTGGAATTTACCATCTGAACAAGTTTTTCATGAGGATTGAGCAATAACATGTTATTGTACATAACTCTTGAGTGTTTCTGTTAAGATAGTCCATTAAGATGAAAGCTCAGGCCTATTCAAGTTCCTTTACAGGCGAATATTTGGCTTTTATTTCGTTATTACTGAGTTTAATATAGGAGTTTTTTTCTCTAGGCCTCGCTCATGTTCTCTTAATATAATAAAAGTACTTACTATTTAATCTCGCTAATGTTATTACTGAGTTCAATATAGGAGTTTTTTTTCCCTAGGCCTATTCAAGTTTTTTTTAATCTCTCTAGTTTTTATTCTTTAAAATTACTTTCTATTTAATCTTTTTTTCTTAAAACTCTCTGCTCTATTTTTTTC ATGGAAGCTATGTCGCTTCCTTCTCTGAATTCTCTTACAATTTCCTGTTCTAATTTGCAGAAAGGGAGTTTCGCCAACTTTTCCAGACGACTGCATCATTGTAACTTCTATGAACAATCCACCTTAAAGTTCAGGCCCCTTCATGGCACTCATCAATATCATTTCAATGTTGTCAAAATGCTAAGTGATGGTGAAGACTATGAGCTGAAGCAAATGAGGGACATGGCTGCAGCTAAAAAGAGATGGGATTCTCTGATCCGGGAAGGCAAAGTGAAAGTTCTGATGCCAAGGGAAGCTGGTTATGCAATTCAGCTATCTGATAAGACATTGCTCGATGTGCGTCCTTCTACAGAACACAAAAAGGCATGGGTTAAAGGCTCAACATGGATCCCTATTTTTGATGTTGATGACAAACTTGATCCGGGAAATCTTTCTCGAAAGGTCACAAGCTTCATGATGGGGGGTTGGTGGAGTGGTGTGCCTACAGTGTCCTACAATAGCCGATTCTTGTCAGAAGTTCAAGAGAAGTTTCCAAAAGATGCTGACCTTATTCTTGCATGCCAAAAAGGATTGAGGTCCCTAGCTGCATGCGAGCTCCTCTACAATGCTGGTTACAAAAACCTTTTCTGGGTTCAAGGCGGTCTAGACTCAGCTGAAGAAGAGGATCTTGTCAGAGAAGGTCCTCAGCCTCTAAAATTTGCTGGGATTGGTGGGCTTTCAGAATTCCTTGGTTGGACCGATCAACAAAGGGTGGCAGGCGCGAAAGAAGGTTGGGGTTATCGATTGGTTTACTCTGCTCGTCTGGTTGCAGTCTTTCTTGCTGTTGATGCTCTATTTATAGGTGCTCAGCAATTGGGCCGTTATATTCAGGAATTACGGTCTCACTAA MEAMSLPSLNSLTISCSNLQKGSFANFSRRLHHCNFYEQSTLKFRPLHGTHQYHFNVVKMLSDGEDYELKQMRDMAAAKKRWDSLIREGKVKVLMPREAGYAIQLSDKTLLDVRPSTEHKKAWVKGSTWIPIFDVDDKLDPGNLSRKVTSFMMGGWWSGVPTVSYNSRFLSEVQEKFPKDADLILACQKGLRSLAACELLYNAGYKNLFWVQGGLDSAEEEDLVREGPQPLKFAGIGGLSEFLGWTDQQRVAGAKEGWGYRLVYSARLVAVFLAVDALFIGAQQLGRYIQELRSH Homology
BLAST of Lcy03g019880 vs. ExPASy Swiss-Prot
Match: Q0WWT7 (Rhodanese-like domain-containing protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR11 PE=2 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 4.8e-112 Identity = 202/300 (67.33%), Postives = 236/300 (78.67%), Query Frame = 0
BLAST of Lcy03g019880 vs. ExPASy Swiss-Prot
Match: Q9SR92 (Rhodanese-like domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=STR10 PE=2 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.9e-24 Identity = 64/161 (39.75%), Postives = 88/161 (54.66%), Query Frame = 0
BLAST of Lcy03g019880 vs. ExPASy Swiss-Prot
Match: O48529 (Rhodanese-like domain-containing protein 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR9 PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 3.1e-18 Identity = 52/161 (32.30%), Postives = 81/161 (50.31%), Query Frame = 0
BLAST of Lcy03g019880 vs. ExPASy Swiss-Prot
Match: Q94A65 (Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g27700 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 4.9e-08 Identity = 42/153 (27.45%), Postives = 75/153 (49.02%), Query Frame = 0
BLAST of Lcy03g019880 vs. ExPASy TrEMBL
Match: A0A5D3BJF1 (Rhodanese-like domain-containing protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00970 PE=4 SV=1) HSP 1 Score: 560.8 bits (1444), Expect = 3.3e-156 Identity = 267/295 (90.51%), Postives = 283/295 (95.93%), Query Frame = 0
BLAST of Lcy03g019880 vs. ExPASy TrEMBL
Match: A0A1S3CN59 (rhodanese-like domain-containing protein 11, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502364 PE=4 SV=1) HSP 1 Score: 560.8 bits (1444), Expect = 3.3e-156 Identity = 267/295 (90.51%), Postives = 283/295 (95.93%), Query Frame = 0
BLAST of Lcy03g019880 vs. ExPASy TrEMBL
Match: A0A6J1E4U4 (rhodanese-like domain-containing protein 11, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429939 PE=4 SV=1) HSP 1 Score: 558.1 bits (1437), Expect = 2.1e-155 Identity = 269/295 (91.19%), Postives = 279/295 (94.58%), Query Frame = 0
BLAST of Lcy03g019880 vs. ExPASy TrEMBL
Match: A0A6J1E1J7 (rhodanese-like domain-containing protein 11, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429939 PE=4 SV=1) HSP 1 Score: 553.9 bits (1426), Expect = 4.0e-154 Identity = 269/295 (91.19%), Postives = 279/295 (94.58%), Query Frame = 0
BLAST of Lcy03g019880 vs. ExPASy TrEMBL
Match: A0A6J1JIW5 (rhodanese-like domain-containing protein 11, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484855 PE=4 SV=1) HSP 1 Score: 550.4 bits (1417), Expect = 4.5e-153 Identity = 266/295 (90.17%), Postives = 276/295 (93.56%), Query Frame = 0
BLAST of Lcy03g019880 vs. NCBI nr
Match: XP_008464502.1 (PREDICTED: rhodanese-like domain-containing protein 11, chloroplastic [Cucumis melo] >TYJ98495.1 rhodanese-like domain-containing protein 11 [Cucumis melo var. makuwa]) HSP 1 Score: 560.8 bits (1444), Expect = 6.8e-156 Identity = 267/295 (90.51%), Postives = 283/295 (95.93%), Query Frame = 0
BLAST of Lcy03g019880 vs. NCBI nr
Match: XP_022921793.1 (rhodanese-like domain-containing protein 11, chloroplastic isoform X1 [Cucurbita moschata]) HSP 1 Score: 558.1 bits (1437), Expect = 4.4e-155 Identity = 269/295 (91.19%), Postives = 279/295 (94.58%), Query Frame = 0
BLAST of Lcy03g019880 vs. NCBI nr
Match: KAG6589413.1 (Rhodanese-like domain-containing protein 11, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 556.2 bits (1432), Expect = 1.7e-154 Identity = 269/295 (91.19%), Postives = 280/295 (94.92%), Query Frame = 0
BLAST of Lcy03g019880 vs. NCBI nr
Match: XP_022921794.1 (rhodanese-like domain-containing protein 11, chloroplastic isoform X2 [Cucurbita moschata]) HSP 1 Score: 553.9 bits (1426), Expect = 8.3e-154 Identity = 269/295 (91.19%), Postives = 279/295 (94.58%), Query Frame = 0
BLAST of Lcy03g019880 vs. NCBI nr
Match: XP_023515575.1 (rhodanese-like domain-containing protein 11, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 553.9 bits (1426), Expect = 8.3e-154 Identity = 266/295 (90.17%), Postives = 278/295 (94.24%), Query Frame = 0
BLAST of Lcy03g019880 vs. TAIR 10
Match: AT4G24750.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 405.6 bits (1041), Expect = 3.4e-113 Identity = 202/300 (67.33%), Postives = 236/300 (78.67%), Query Frame = 0
BLAST of Lcy03g019880 vs. TAIR 10
Match: AT3G08920.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 114.0 bits (284), Expect = 2.1e-25 Identity = 64/161 (39.75%), Postives = 88/161 (54.66%), Query Frame = 0
BLAST of Lcy03g019880 vs. TAIR 10
Match: AT2G42220.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 94.0 bits (232), Expect = 2.2e-19 Identity = 52/161 (32.30%), Postives = 81/161 (50.31%), Query Frame = 0
BLAST of Lcy03g019880 vs. TAIR 10
Match: AT4G27700.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 60.1 bits (144), Expect = 3.5e-09 Identity = 42/153 (27.45%), Postives = 75/153 (49.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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