Lcy03g017660 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g017660
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	homeobox-leucine zipper protein HAT3-like
Location	Chr03: 51427713 .. 51429043 (-)
RNA-Seq Expression	Lcy03g017660
Synteny	Lcy03g017660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGATTCAACTTGAAACCTCTTTCAAACCCTTCTTCTCCATTTCTCTCTTAATACCCACTTCCTCTTCTTCTCCAATTCCAATTCCAATTCCCATCTCTCTCTCTCTTCTTCTTCTCTCTCTAAACCGCCATGGCAGACCAAGATGAGCTCTGCAACATCAGGCTTGGCCTTGGCCTTGGCTTGGGATTTGGCGAATATGTCCCTAAAAAGATGCAGAAAATCAACAACAACAGCCCCAAATTCTTCTCTGATCGTCTCTCCTTCACTCTCATTCCAAAAGAGGAATCCGCCATTAACAACAACAACATGGAGCTCGAAGAAGCTAATGAAACTTCTCAAGATTCATCCTTTGGAAGAAGAGATAATAACAATTCTTCCAACAATAATACTAACAATTCTTACAACGCCATTAGTGGATCAGAAAGAGAGAGGAAAAAGCTTAGGCTTTCCAAAGAACAGTCCACTTTGCTCGAAGAAAACTTCAAACTTCACACCACTTTGAATCCGGTAAGCTTTTTTTTTTTTTTTCCTCGAAAACCCATTTGACCCTTTTGGATTTCTTTTCATTTTCTGAAATACCCATCAATTTTTCTTGTCAAAAATTTGATCTTTTTTCTCTTTTGTTCTTCTTTTTTTTTTTTTTTTGCATGAATTTGCAGGCTCAGAAGCAGGCACTTGCCCAACAATTAAACCTCAAAACTCGACAAGTGGAAGTTTGGTTTCAAAACAGACGTGCAAGGTAATATCACAATTTTAACGTTATTTTTTCCAAAAAAAAAAAAAAAAAAAACCCTTCGTACCAAATAATGCCACCTTTAATTCGTCAGGTTAAAAGTTTTCTCTCTAATTTGTGTCTGAATATTGAAAGTCGTGTATATATGAAGTTAGAATGTAAAATTTTACTGATTCGAACAGGACGAAATTGAAACAAACGGAAGTAGATTGCGAGTTTTTGAAGAAATGTTGCGAAAGGCTGAACGAAGAGAATCGAAGGTTGAAGAAAGAGTTGCATGAATTACGATCCATAAAACTTGGAGCTTCACAGTTGTATATTCAGCTACCCAAGGCGGCGACGCTCACAATTTGCCCTTCATGCGACAAAATTACGAGGACGGCCGCCGCCAACGCCGCCGTGGAGGCCAAATCTCCGCCACAATAATTTAATGCGTTTTTTAGGCTGTGTTTGTTGAGTACAGCAAAAAAGAATAATAATTCAATTAAAAAACAATACAGCCTTTTTAGATTTTATGGATCATCTAAATTATGTTATGGAAAAATGGTGCTGGCCTGTGTTAATCCAAATCTGAGAAAAGGAAAGCCTTTTTTTTTC

mRNA sequence

CTGATTCAACTTGAAACCTCTTTCAAACCCTTCTTCTCCATTTCTCTCTTAATACCCACTTCCTCTTCTTCTCCAATTCCAATTCCAATTCCCATCTCTCTCTCTCTTCTTCTTCTCTCTCTAAACCGCCATGGCAGACCAAGATGAGCTCTGCAACATCAGGCTTGGCCTTGGCCTTGGCTTGGGATTTGGCGAATATGTCCCTAAAAAGATGCAGAAAATCAACAACAACAGCCCCAAATTCTTCTCTGATCGTCTCTCCTTCACTCTCATTCCAAAAGAGGAATCCGCCATTAACAACAACAACATGGAGCTCGAAGAAGCTAATGAAACTTCTCAAGATTCATCCTTTGGAAGAAGAGATAATAACAATTCTTCCAACAATAATACTAACAATTCTTACAACGCCATTAGTGGATCAGAAAGAGAGAGGAAAAAGCTTAGGCTTTCCAAAGAACAGTCCACTTTGCTCGAAGAAAACTTCAAACTTCACACCACTTTGAATCCGGCTCAGAAGCAGGCACTTGCCCAACAATTAAACCTCAAAACTCGACAAGTGGAAGTTTGGTTTCAAAACAGACGTGCAAGGACGAAATTGAAACAAACGGAAGTAGATTGCGAGTTTTTGAAGAAATGTTGCGAAAGGCTGAACGAAGAGAATCGAAGGTTGAAGAAAGAGTTGCATGAATTACGATCCATAAAACTTGGAGCTTCACAGTTGTATATTCAGCTACCCAAGGCGGCGACGCTCACAATTTGCCCTTCATGCGACAAAATTACGAGGACGGCCGCCGCCAACGCCGCCGTGGAGGCCAAATCTCCGCCACAATAATTTAATGCGTTTTTTAGGCTGTGTTTGTTGAGTACAGCAAAAAAGAATAATAATTCAATTAAAAAACAATACAGCCTTTTTAGATTTTATGGATCATCTAAATTATGTTATGGAAAAATGGTGCTGGCCTGTGTTAATCCAAATCTGAGAAAAGGAAAGCCTTTTTTTTTC

Coding sequence (CDS)

ATGGCAGACCAAGATGAGCTCTGCAACATCAGGCTTGGCCTTGGCCTTGGCTTGGGATTTGGCGAATATGTCCCTAAAAAGATGCAGAAAATCAACAACAACAGCCCCAAATTCTTCTCTGATCGTCTCTCCTTCACTCTCATTCCAAAAGAGGAATCCGCCATTAACAACAACAACATGGAGCTCGAAGAAGCTAATGAAACTTCTCAAGATTCATCCTTTGGAAGAAGAGATAATAACAATTCTTCCAACAATAATACTAACAATTCTTACAACGCCATTAGTGGATCAGAAAGAGAGAGGAAAAAGCTTAGGCTTTCCAAAGAACAGTCCACTTTGCTCGAAGAAAACTTCAAACTTCACACCACTTTGAATCCGGCTCAGAAGCAGGCACTTGCCCAACAATTAAACCTCAAAACTCGACAAGTGGAAGTTTGGTTTCAAAACAGACGTGCAAGGACGAAATTGAAACAAACGGAAGTAGATTGCGAGTTTTTGAAGAAATGTTGCGAAAGGCTGAACGAAGAGAATCGAAGGTTGAAGAAAGAGTTGCATGAATTACGATCCATAAAACTTGGAGCTTCACAGTTGTATATTCAGCTACCCAAGGCGGCGACGCTCACAATTTGCCCTTCATGCGACAAAATTACGAGGACGGCCGCCGCCAACGCCGCCGTGGAGGCCAAATCTCCGCCACAATAA

Protein sequence

MADQDELCNIRLGLGLGLGFGEYVPKKMQKINNNSPKFFSDRLSFTLIPKEESAINNNNMELEEANETSQDSSFGRRDNNNSSNNNTNNSYNAISGSERERKKLRLSKEQSTLLEENFKLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRSIKLGASQLYIQLPKAATLTICPSCDKITRTAAANAAVEAKSPPQ

Homology

[Close]

BLAST of Lcy03g017660 vs. ExPASy Swiss-Prot
Match: Q01I23 (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. indica OX=39946 GN=HOX17 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.6e-38
Identity = 83/133 (62.41%), Postives = 105/133 (78.95%), Query Frame = 0


Query: 96  GSERERKKLRLSKEQSTLLEENFKLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTK 155
           G +  RKKLRLSK+QS +LE++F+ H TLNP QK  LAQQL L+ RQVEVWFQNRRARTK
Sbjct: 76  GIDGSRKKLRLSKDQSAVLEDSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRARTK 135

Query: 156 LKQTEVDCEFLKKCCERLNEENRRLKKELHELRSIKLGASQLYIQLPKAATLTICPSCDK 215
           LKQTEVDCEFLK+CCE L EENRRL+KE+ ELR++KL +  LY+ +    TLT+CPSC++
Sbjct: 136 LKQTEVDCEFLKRCCETLTEENRRLQKEVQELRALKLVSPHLYMNMSPPTTLTMCPSCER 195

Query: 216 ITRTAAANAAVEA 229
           ++ T   ++A  A
Sbjct: 196 VSNTNNNSSAAAA 208

[Close]

BLAST of Lcy03g017660 vs. ExPASy Swiss-Prot
Match: Q0JB92 (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX17 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.6e-38
Identity = 83/133 (62.41%), Postives = 105/133 (78.95%), Query Frame = 0


Query: 96  GSERERKKLRLSKEQSTLLEENFKLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTK 155
           G +  RKKLRLSK+QS +LE++F+ H TLNP QK  LAQQL L+ RQVEVWFQNRRARTK
Sbjct: 76  GIDGSRKKLRLSKDQSAVLEDSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRARTK 135

Query: 156 LKQTEVDCEFLKKCCERLNEENRRLKKELHELRSIKLGASQLYIQLPKAATLTICPSCDK 215
           LKQTEVDCEFLK+CCE L EENRRL+KE+ ELR++KL +  LY+ +    TLT+CPSC++
Sbjct: 136 LKQTEVDCEFLKRCCETLTEENRRLQKEVQELRALKLVSPHLYMNMSPPTTLTMCPSCER 195

Query: 216 ITRTAAANAAVEA 229
           ++ T   ++A  A
Sbjct: 196 VSNTNNNSSAAAA 208

[Close]

BLAST of Lcy03g017660 vs. ExPASy Swiss-Prot
Match: A2XE76 (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. indica OX=39946 GN=HOX19 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.8e-37
Identity = 89/143 (62.24%), Postives = 106/143 (74.13%), Query Frame = 0


Query: 101 RKKLRLSKEQSTLLEENFKLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTE 160
           RKKLRL+KEQS LLE+ F+ H+TLNP QK ALA+QLNL+ RQVEVWFQNRRARTKLKQTE
Sbjct: 126 RKKLRLTKEQSALLEDRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTE 185

Query: 161 VDCEFLKKCCERLNEENRRLKKELHELRSIKLG---------------ASQLYIQLPKAA 220
           VDCEFLK+CCE L EENRRL++EL ELR++K                  +  Y+QLP AA
Sbjct: 186 VDCEFLKRCCETLTEENRRLQRELQELRALKFAPPPPSSAAHQPSPAPPAPFYMQLP-AA 245

Query: 221 TLTICPSCDKITRTAAANAAVEA 229
           TLTICPSC+++   A+A   V A
Sbjct: 246 TLTICPSCERVGGPASAAKVVAA 267

[Close]

BLAST of Lcy03g017660 vs. ExPASy Swiss-Prot
Match: Q8GRL4 (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX19 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.8e-37
Identity = 89/143 (62.24%), Postives = 106/143 (74.13%), Query Frame = 0


Query: 101 RKKLRLSKEQSTLLEENFKLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTE 160
           RKKLRL+KEQS LLE+ F+ H+TLNP QK ALA+QLNL+ RQVEVWFQNRRARTKLKQTE
Sbjct: 126 RKKLRLTKEQSALLEDRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTE 185

Query: 161 VDCEFLKKCCERLNEENRRLKKELHELRSIKLG---------------ASQLYIQLPKAA 220
           VDCEFLK+CCE L EENRRL++EL ELR++K                  +  Y+QLP AA
Sbjct: 186 VDCEFLKRCCETLTEENRRLQRELQELRALKFAPPPPSSAAHQPSPAPPAPFYMQLP-AA 245

Query: 221 TLTICPSCDKITRTAAANAAVEA 229
           TLTICPSC+++   A+A   V A
Sbjct: 246 TLTICPSCERVGGPASAAKVVAA 267

[Close]

BLAST of Lcy03g017660 vs. ExPASy Swiss-Prot
Match: P46602 (Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana OX=3702 GN=HAT3 PE=1 SV=2)

HSP 1 Score: 157.1 bits (396), Expect = 2.3e-37
Identity = 91/171 (53.22%), Postives = 119/171 (69.59%), Query Frame = 0


Query: 54  AINNNNMELEEANETSQDSSFGRRDNNNSSNNNTNNSYNAISGSERERKKLRLSKEQSTL 113
           A+    +E  E    S     G  D + S N           G +  RKKLRLSKEQ+ +
Sbjct: 125 AVGGGRVEDNEIERASCSLGGGSDDEDGSGN-----------GDDSSRKKLRLSKEQALV 184

Query: 114 LEENFKLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERL 173
           LEE FK H+TLNP QK ALA+QLNL+TRQVEVWFQNRRARTKLKQTEVDCE+LK+CCE L
Sbjct: 185 LEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENL 244

Query: 174 NEENRRLKKELHELRSIKLGASQLYIQLPKAATLTICPSCDKITRTAAANA 225
            +ENRRL+KE+ ELR++KL +  LY+ +    TLT+CPSC+++  T+++++
Sbjct: 245 TDENRRLQKEVSELRALKL-SPHLYMHMKPPTTLTMCPSCERVAVTSSSSS 283

[Close]

BLAST of Lcy03g017660 vs. ExPASy TrEMBL
Match: A0A6J1EUD1 (homeobox-leucine zipper protein HAT3-like OS=Cucurbita moschata OX=3662 GN=LOC111437643 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 2.0e-79
Identity = 175/234 (74.79%), Postives = 185/234 (79.06%), Query Frame = 0


Query: 1   MADQDELCNIRLGLGLGLGFGEYVPKKMQKI--NNNSPKFFSDRLSFTLIPKEESAINNN 60
           M DQD+LCNIRLGL LG GFGEYVPKKMQKI  N+N+PK  +D LSFTL+PK+E AIN  
Sbjct: 1   MGDQDDLCNIRLGLSLGSGFGEYVPKKMQKINSNHNNPKSCTD-LSFTLVPKQELAIN-- 60

Query: 61  NMELEEANETSQDSSFGRRDNNNSSNNNTNNSYNAISGSERERKKLRLSKEQSTLLEENF 120
                                    ++ T NS    S  ERERKKLRLSKEQ+TLLEE+F
Sbjct: 61  -------------------------SSTTTNSLG--SERERERKKLRLSKEQATLLEESF 120

Query: 121 KLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENR 180
           KLHTTLNPAQKQALA QLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENR
Sbjct: 121 KLHTTLNPAQKQALAHQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENR 180

Query: 181 RLKKELHELRSIKLGASQLYIQLPKAATLTICPSCDKITRTAAANAAVEAKSPP 233
           RLKKELHELRSIKLGASQLYIQLPKAATLTICPSCDKITRT AANAA E  SPP
Sbjct: 181 RLKKELHELRSIKLGASQLYIQLPKAATLTICPSCDKITRTPAANAAAEPNSPP 204

[Close]

BLAST of Lcy03g017660 vs. ExPASy TrEMBL
Match: A0A6J1E158 (homeobox-leucine zipper protein ATHB-4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429651 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 5.6e-74
Identity = 178/234 (76.07%), Postives = 190/234 (81.20%), Query Frame = 0


Query: 1   MADQDELCNIRLGLGLGLGFGEYVPKKMQKINNNSPKFFSDRLSFTLIPKEESAINNNNM 60
           M DQDELCN R  LGL LGFG+YVPKKMQK  N  PKF SD LSF+LIP++ESAI   NM
Sbjct: 1   MGDQDELCNTR--LGLALGFGDYVPKKMQKA-NKQPKFLSD-LSFSLIPRQESAI---NM 60

Query: 61  ELEEANETSQDSSFGRRDNNNSSNNNTNNSYNAISGS-ERERKKLRLSKEQSTLLEENFK 120
           +L +ANE S+DSSFG   + +S+N N     NAISG  ERERKKLRLS+EQ TLLEE FK
Sbjct: 61  QL-QANEPSKDSSFGISRDRSSTNYNC----NAISGGLERERKKLRLSQEQLTLLEETFK 120

Query: 121 LHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRR 180
           LHTTLN AQK ALAQQLNLK RQVEVWFQNRRAR+KLKQTEVDCEFLKK CERL EEN R
Sbjct: 121 LHTTLNLAQKLALAQQLNLKARQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGR 180

Query: 181 LKKELHELRSIKLGASQLYIQLPKAATLTICPSCDKITRTAAANAAVEAKSPPQ 234
           LKKEL ELRS KLGASQLYIQLPKAATLTICPSCDK TR A   AAVEA SPPQ
Sbjct: 181 LKKELQELRSTKLGASQLYIQLPKAATLTICPSCDKTTRPA---AAVEAHSPPQ 219

[Close]

BLAST of Lcy03g017660 vs. ExPASy TrEMBL
Match: A0A6J1BYS3 (homeobox-leucine zipper protein HAT22-like OS=Momordica charantia OX=3673 GN=LOC111006976 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 6.1e-73
Identity = 164/225 (72.89%), Postives = 185/225 (82.22%), Query Frame = 0


Query: 1   MADQDELCNIRLGLGLGLGFGEYVPKKMQKINNNSPKFFSDRLSFTLIPKEESAINNNNM 60
           M   DE+CNIRLGLGLG G  EYVPKK  KINN++PKFFSD LSFTLIPKEE+     N+
Sbjct: 1   MGGDDEICNIRLGLGLGFG-EEYVPKK--KINNHNPKFFSD-LSFTLIPKEEAI----NV 60

Query: 61  ELEEANETSQDSSFGRRDNNNSSNNNTNNSYNAISGSERERKKLRLSKEQSTLLEENFKL 120
           E+E    +S D    +R  +N++ +   +S + +     ERKKLRLSKEQS LLEE+FKL
Sbjct: 61  EIE---ASSSDHDHLKRIRSNNNQDQIRDSSSIVINGSSERKKLRLSKEQSNLLEESFKL 120

Query: 121 HTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRL 180
           HTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRL
Sbjct: 121 HTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRL 180

Query: 181 KKELHELRSIKLGASQLYIQLPKAATLTICPSCDKITRTAAANAA 226
           KKE+ ELRS+K+GASQLYIQLPKAATLTICPSC+K+TR AAA AA
Sbjct: 181 KKEVQELRSLKIGASQLYIQLPKAATLTICPSCNKLTRNAAATAA 214

[Close]

BLAST of Lcy03g017660 vs. ExPASy TrEMBL
Match: A0A5A7USQ4 (Homeobox-leucine zipper protein HOX18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G005100 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 3.0e-72
Identity = 181/272 (66.54%), Postives = 200/272 (73.53%), Query Frame = 0


Query: 4   QDELCNIRLGLGLGLGFG-EYVPKKMQKINNNSPKFFSDRLSFTLIPKEESAI-NNNNME 63
           +DE+CNI   L LGLGFG +YVPKK+QK  +        ++SFTLIPKEE  I NNNNME
Sbjct: 6   EDEICNIS-WLSLGLGFGDQYVPKKIQKNQHQ-----QQQVSFTLIPKEELEITNNNNME 65

Query: 64  LEEANETS---------------------------QDSSFG--------RRDNNNSSNNN 123
           +++    S                           QDSSFG        +  NNN   N+
Sbjct: 66  IDDDEVNSSEEDDDHHLMKRIRSNNNIVNYDHHHRQDSSFGSIRRLSSDQYINNNDIVNS 125

Query: 124 TNNSYNAI--SGSE-RERKKLRLSKEQSTLLEENFKLHTTLNPAQKQALAQQLNLKTRQV 183
           TN++Y  I  SGSE RERKKLRLSKEQSTLLEE+FKLHTTLNPAQKQALAQQLNLKTRQV
Sbjct: 126 TNHNYKGISSSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQKQALAQQLNLKTRQV 185

Query: 184 EVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRSIKLGASQLYIQLPK 234
           EVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKEL+ELRS+KLGASQLYIQLPK
Sbjct: 186 EVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELNELRSLKLGASQLYIQLPK 245

[Close]

BLAST of Lcy03g017660 vs. ExPASy TrEMBL
Match: A0A1S3BWH2 (homeobox-leucine zipper protein HOX18-like OS=Cucumis melo OX=3656 GN=LOC103494220 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 3.0e-72
Identity = 181/272 (66.54%), Postives = 200/272 (73.53%), Query Frame = 0


Query: 4   QDELCNIRLGLGLGLGFG-EYVPKKMQKINNNSPKFFSDRLSFTLIPKEESAI-NNNNME 63
           +DE+CNI   L LGLGFG +YVPKK+QK  +        ++SFTLIPKEE  I NNNNME
Sbjct: 6   EDEICNIS-WLSLGLGFGDQYVPKKIQKNQHQ-----QQQVSFTLIPKEELEITNNNNME 65

Query: 64  LEEANETS---------------------------QDSSFG--------RRDNNNSSNNN 123
           +++    S                           QDSSFG        +  NNN   N+
Sbjct: 66  IDDDEVNSSEEDDDHHLMKRIRSNNNIVNYDHHHRQDSSFGSIRRLSSDQYINNNDIVNS 125

Query: 124 TNNSYNAI--SGSE-RERKKLRLSKEQSTLLEENFKLHTTLNPAQKQALAQQLNLKTRQV 183
           TN++Y  I  SGSE RERKKLRLSKEQSTLLEE+FKLHTTLNPAQKQALAQQLNLKTRQV
Sbjct: 126 TNHNYKGISSSGSELRERKKLRLSKEQSTLLEESFKLHTTLNPAQKQALAQQLNLKTRQV 185

Query: 184 EVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRSIKLGASQLYIQLPK 234
           EVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKEL+ELRS+KLGASQLYIQLPK
Sbjct: 186 EVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELNELRSLKLGASQLYIQLPK 245

[Close]

BLAST of Lcy03g017660 vs. NCBI nr
Match: KAG6587716.1 (Homeobox-leucine zipper protein HAT4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 307.4 bits (786), Expect = 1.1e-79
Identity = 175/234 (74.79%), Postives = 186/234 (79.49%), Query Frame = 0


Query: 1   MADQDELCNIRLGLGLGLGFGEYVPKKMQKI--NNNSPKFFSDRLSFTLIPKEESAINNN 60
           M DQD+LCNIRLGL LG GFGEYVPKKMQKI  N+N+PK F+D LSFTL+PK+E AIN  
Sbjct: 1   MGDQDDLCNIRLGLSLGSGFGEYVPKKMQKINSNHNNPKSFTD-LSFTLVPKQELAIN-- 60

Query: 61  NMELEEANETSQDSSFGRRDNNNSSNNNTNNSYNAISGSERERKKLRLSKEQSTLLEENF 120
                                    ++ T NS    S  ERERKKLRLSKEQ+TLLEE+F
Sbjct: 61  -------------------------SSTTTNSLG--SERERERKKLRLSKEQATLLEESF 120

Query: 121 KLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENR 180
           KLHTTLNPAQKQALA QLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENR
Sbjct: 121 KLHTTLNPAQKQALAHQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENR 180

Query: 181 RLKKELHELRSIKLGASQLYIQLPKAATLTICPSCDKITRTAAANAAVEAKSPP 233
           RLKKELHELRSIKLGASQLYIQLPKAATLTICPSCDKITRT AANAA +  SPP
Sbjct: 181 RLKKELHELRSIKLGASQLYIQLPKAATLTICPSCDKITRTPAANAAADPNSPP 204

[Close]

BLAST of Lcy03g017660 vs. NCBI nr
Match: XP_023531587.1 (homeobox-leucine zipper protein HAT3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 306.6 bits (784), Expect = 1.8e-79
Identity = 175/234 (74.79%), Postives = 185/234 (79.06%), Query Frame = 0


Query: 1   MADQDELCNIRLGLGLGLGFGEYVPKKMQKI--NNNSPKFFSDRLSFTLIPKEESAINNN 60
           M DQD+LCNIRLGL LG GFGEYVPKKMQKI  N+N+PK F+D LSFTL+PK+E  IN  
Sbjct: 1   MGDQDDLCNIRLGLSLGSGFGEYVPKKMQKINSNHNNPKSFTD-LSFTLVPKQELPIN-- 60

Query: 61  NMELEEANETSQDSSFGRRDNNNSSNNNTNNSYNAISGSERERKKLRLSKEQSTLLEENF 120
                                    ++ T NS    S  ERERKKLRLSKEQ+TLLEE+F
Sbjct: 61  -------------------------SSTTTNSLG--SERERERKKLRLSKEQATLLEESF 120

Query: 121 KLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENR 180
           KLHTTLNPAQKQALA QLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENR
Sbjct: 121 KLHTTLNPAQKQALAHQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENR 180

Query: 181 RLKKELHELRSIKLGASQLYIQLPKAATLTICPSCDKITRTAAANAAVEAKSPP 233
           RLKKELHELRSIKLGASQLYIQLPKAATLTICPSCDKITRT AANAA E  SPP
Sbjct: 181 RLKKELHELRSIKLGASQLYIQLPKAATLTICPSCDKITRTPAANAAAEPNSPP 204

[Close]

BLAST of Lcy03g017660 vs. NCBI nr
Match: XP_022931479.1 (homeobox-leucine zipper protein HAT3-like [Cucurbita moschata])

HSP 1 Score: 305.4 bits (781), Expect = 4.1e-79
Identity = 175/234 (74.79%), Postives = 185/234 (79.06%), Query Frame = 0


Query: 1   MADQDELCNIRLGLGLGLGFGEYVPKKMQKI--NNNSPKFFSDRLSFTLIPKEESAINNN 60
           M DQD+LCNIRLGL LG GFGEYVPKKMQKI  N+N+PK  +D LSFTL+PK+E AIN  
Sbjct: 1   MGDQDDLCNIRLGLSLGSGFGEYVPKKMQKINSNHNNPKSCTD-LSFTLVPKQELAIN-- 60

Query: 61  NMELEEANETSQDSSFGRRDNNNSSNNNTNNSYNAISGSERERKKLRLSKEQSTLLEENF 120
                                    ++ T NS    S  ERERKKLRLSKEQ+TLLEE+F
Sbjct: 61  -------------------------SSTTTNSLG--SERERERKKLRLSKEQATLLEESF 120

Query: 121 KLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENR 180
           KLHTTLNPAQKQALA QLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENR
Sbjct: 121 KLHTTLNPAQKQALAHQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENR 180

Query: 181 RLKKELHELRSIKLGASQLYIQLPKAATLTICPSCDKITRTAAANAAVEAKSPP 233
           RLKKELHELRSIKLGASQLYIQLPKAATLTICPSCDKITRT AANAA E  SPP
Sbjct: 181 RLKKELHELRSIKLGASQLYIQLPKAATLTICPSCDKITRTPAANAAAEPNSPP 204

[Close]

BLAST of Lcy03g017660 vs. NCBI nr
Match: XP_038879995.1 (homeobox-leucine zipper protein HOX17-like [Benincasa hispida])

HSP 1 Score: 299.3 bits (765), Expect = 2.9e-77
Identity = 190/275 (69.09%), Postives = 206/275 (74.91%), Query Frame = 0


Query: 4   QDELCNIR-LGLGLGLGFGEYVPKKMQKINNNSPKFFSDRLSFTLIPKEESAINNN---- 63
           QDE+CNI  L LGLG G  +YVPKKMQKINNN       +LSFTLIPKEE  INNN    
Sbjct: 5   QDEVCNISWLSLGLGFGDDQYVPKKMQKINNN-------QLSFTLIPKEELGINNNNNSN 64

Query: 64  -NMEL--EEANETS----------------------QDSSFGRRD-------NNNSSNNN 123
            NME+  EEAN +                       QDSSFG R        ++ SSNNN
Sbjct: 65  INMEIDDEEANSSEEDHHHHLMKRSRSNNNIVNYDHQDSSFGIRSRSSSDHHHHQSSNNN 124

Query: 124 ---TNNSYNAISGSE----RERKKLRLSKEQSTLLEENFKLHTTLNPAQKQALAQQLNLK 183
              TN+++  IS S     RERKKLRLSKEQSTLLEE+FKL+TTLNPAQKQALAQQLNLK
Sbjct: 125 IITTNHNHKGISSSGASELRERKKLRLSKEQSTLLEESFKLNTTLNPAQKQALAQQLNLK 184

Query: 184 TRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRSIKLGASQLYI 234
           TRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHEL+S+KLGASQLYI
Sbjct: 185 TRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELKSLKLGASQLYI 244

[Close]

BLAST of Lcy03g017660 vs. NCBI nr
Match: XP_022921356.1 (homeobox-leucine zipper protein ATHB-4-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 287.3 bits (734), Expect = 1.1e-73
Identity = 178/234 (76.07%), Postives = 190/234 (81.20%), Query Frame = 0


Query: 1   MADQDELCNIRLGLGLGLGFGEYVPKKMQKINNNSPKFFSDRLSFTLIPKEESAINNNNM 60
           M DQDELCN R  LGL LGFG+YVPKKMQK  N  PKF SD LSF+LIP++ESAI   NM
Sbjct: 1   MGDQDELCNTR--LGLALGFGDYVPKKMQKA-NKQPKFLSD-LSFSLIPRQESAI---NM 60

Query: 61  ELEEANETSQDSSFGRRDNNNSSNNNTNNSYNAISGS-ERERKKLRLSKEQSTLLEENFK 120
           +L +ANE S+DSSFG   + +S+N N     NAISG  ERERKKLRLS+EQ TLLEE FK
Sbjct: 61  QL-QANEPSKDSSFGISRDRSSTNYNC----NAISGGLERERKKLRLSQEQLTLLEETFK 120

Query: 121 LHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRR 180
           LHTTLN AQK ALAQQLNLK RQVEVWFQNRRAR+KLKQTEVDCEFLKK CERL EEN R
Sbjct: 121 LHTTLNLAQKLALAQQLNLKARQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGR 180

Query: 181 LKKELHELRSIKLGASQLYIQLPKAATLTICPSCDKITRTAAANAAVEAKSPPQ 234
           LKKEL ELRS KLGASQLYIQLPKAATLTICPSCDK TR A   AAVEA SPPQ
Sbjct: 181 LKKELQELRSTKLGASQLYIQLPKAATLTICPSCDKTTRPA---AAVEAHSPPQ 219

[Close]

BLAST of Lcy03g017660 vs. TAIR 10
Match: AT3G60390.1 (homeobox-leucine zipper protein 3 )

HSP 1 Score: 157.1 bits (396), Expect = 1.7e-38
Identity = 91/171 (53.22%), Postives = 119/171 (69.59%), Query Frame = 0


Query: 54  AINNNNMELEEANETSQDSSFGRRDNNNSSNNNTNNSYNAISGSERERKKLRLSKEQSTL 113
           A+    +E  E    S     G  D + S N           G +  RKKLRLSKEQ+ +
Sbjct: 125 AVGGGRVEDNEIERASCSLGGGSDDEDGSGN-----------GDDSSRKKLRLSKEQALV 184

Query: 114 LEENFKLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERL 173
           LEE FK H+TLNP QK ALA+QLNL+TRQVEVWFQNRRARTKLKQTEVDCE+LK+CCE L
Sbjct: 185 LEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENL 244

Query: 174 NEENRRLKKELHELRSIKLGASQLYIQLPKAATLTICPSCDKITRTAAANA 225
            +ENRRL+KE+ ELR++KL +  LY+ +    TLT+CPSC+++  T+++++
Sbjct: 245 TDENRRLQKEVSELRALKL-SPHLYMHMKPPTTLTMCPSCERVAVTSSSSS 283

[Close]

BLAST of Lcy03g017660 vs. TAIR 10
Match: AT4G37790.1 (Homeobox-leucine zipper protein family )

HSP 1 Score: 155.6 bits (392), Expect = 4.9e-38
Identity = 95/167 (56.89%), Postives = 122/167 (73.05%), Query Frame = 0


Query: 50  KEESAINNNNMELEEANETSQDSSFGRRDNNNSSNNNTNNSYNAISGSERERKKLRLSKE 109
           K E  I+  + E EEA ET++     R  +++      +            RKKLRL+K+
Sbjct: 86  KREREISGGDGE-EEAEETTERVVCSRVSDDHDDEEGVS-----------ARKKLRLTKQ 145

Query: 110 QSTLLEENFKLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKC 169
           QS LLE+NFKLH+TLNP QKQALA+QLNL+ RQVEVWFQNRRARTKLKQTEVDCEFLKKC
Sbjct: 146 QSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKC 205

Query: 170 CERLNEENRRLKKELHELRSIKLGASQLYIQLPKAATLTICPSCDKI 217
           CE L +ENRRL+KEL +L+++KL +   Y+ +P AATLT+CPSC+++
Sbjct: 206 CETLTDENRRLQKELQDLKALKL-SQPFYMHMP-AATLTMCPSCERL 238

[Close]

BLAST of Lcy03g017660 vs. TAIR 10
Match: AT2G44910.1 (homeobox-leucine zipper protein 4 )

HSP 1 Score: 150.2 bits (378), Expect = 2.0e-36
Identity = 90/186 (48.39%), Postives = 127/186 (68.28%), Query Frame = 0


Query: 48  IPKEESAINNNNMELEEANETSQDSSFGRRDNNNSSNNNTNNSYNAISGSERE------- 107
           + +E + +++ N  +   +   +D +  R  + N +   + +      GS+ E       
Sbjct: 101 LEEEAAVVSSPNSAVSSLSGNKRDLAVARGGDENEAERASCSRGGGSGGSDDEDGGNGDG 160

Query: 108 -RKKLRLSKEQSTLLEENFKLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQT 167
            RKKLRLSK+Q+ +LEE FK H+TLNP QK ALA+QLNL+ RQVEVWFQNRRARTKLKQT
Sbjct: 161 SRKKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQT 220

Query: 168 EVDCEFLKKCCERLNEENRRLKKELHELRSIKLGASQLYIQLPKAATLTICPSCDKITRT 226
           EVDCE+LK+CC+ L EENRRL+KE+ ELR++KL +  LY+ +    TLT+CPSC++++ +
Sbjct: 221 EVDCEYLKRCCDNLTEENRRLQKEVSELRALKL-SPHLYMHMTPPTTLTMCPSCERVSSS 280

[Close]

BLAST of Lcy03g017660 vs. TAIR 10
Match: AT5G06710.1 (homeobox from Arabidopsis thaliana )

HSP 1 Score: 150.2 bits (378), Expect = 2.0e-36
Identity = 95/185 (51.35%), Postives = 128/185 (69.19%), Query Frame = 0


Query: 50  KEESAINNNNMELEEANETSQDSSFG-------RRDNNNSSNNNTNNSYNAISGSERE-- 109
           +EE A+ + ++   ++  +S    FG       RR N    ++    S +  S  + +  
Sbjct: 125 EEEEAVPSMSVSPPDSVTSSFQLDFGIKSYGYERRSNKRDIDDEVERSASRASNEDNDDE 184

Query: 110 ----RKKLRLSKEQSTLLEENFKLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKL 169
               RKKLRLSK+QS  LE++FK H+TLNP QK ALA+QLNL+ RQVEVWFQNRRARTKL
Sbjct: 185 NGSTRKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKL 244

Query: 170 KQTEVDCEFLKKCCERLNEENRRLKKELHELRSIKLGASQLYIQLPKAATLTICPSCDKI 222
           KQTEVDCE+LK+CCE L EENRRL+KE+ ELR++K  ++  Y+QLP A TLT+CPSC+++
Sbjct: 245 KQTEVDCEYLKRCCESLTEENRRLQKEVKELRTLKT-STPFYMQLP-ATTLTMCPSCERV 304

[Close]

BLAST of Lcy03g017660 vs. TAIR 10
Match: AT4G16780.1 (homeobox protein 2 )

HSP 1 Score: 149.1 bits (375), Expect = 4.5e-36
Identity = 86/169 (50.89%), Postives = 115/169 (68.05%), Query Frame = 0


Query: 49  PKEESAINNNNMELEEANETSQDSSFGRRDNNNSSNNNTNNSYNAISGSERERKKLRLSK 108
           P   +   + +  +   N T   S+  R +    ++   +   +     +  RKKLRLSK
Sbjct: 76  PPSTAEYGDEDAGVSSPNSTVSSSTGKRSEREEDTDPQGSRGISDDEDGDNSRKKLRLSK 135

Query: 109 EQSTLLEENFKLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKK 168
           +QS +LEE FK H+TLNP QKQALA+QL L+ RQVEVWFQNRRARTKLKQTEVDCEFL++
Sbjct: 136 DQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRR 195

Query: 169 CCERLNEENRRLKKELHELRSIKLGASQLYIQLPKAATLTICPSCDKIT 218
           CCE L EENRRL+KE+ ELR++KL + Q Y+ +    TLT+CPSC+ ++
Sbjct: 196 CCENLTEENRRLQKEVTELRALKL-SPQFYMHMSPPTTLTMCPSCEHVS 243

The following BLAST results are available for this feature:

BLAST of Lcy03g017660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q01I23	1.6e-38	62.41	Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q0JB92	1.6e-38	62.41	Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
A2XE76	1.8e-37	62.24	Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q8GRL4	1.8e-37	62.24	Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
P46602	2.3e-37	53.22	Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana OX=3702 GN=HAT3 PE=...	[more]

BLAST of Lcy03g017660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EUD1	2.0e-79	74.79	homeobox-leucine zipper protein HAT3-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1E158	5.6e-74	76.07	homeobox-leucine zipper protein ATHB-4-like isoform X1 OS=Cucurbita moschata OX=...	[more]
A0A6J1BYS3	6.1e-73	72.89	homeobox-leucine zipper protein HAT22-like OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A5A7USQ4	3.0e-72	66.54	Homeobox-leucine zipper protein HOX18-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BWH2	3.0e-72	66.54	homeobox-leucine zipper protein HOX18-like OS=Cucumis melo OX=3656 GN=LOC1034942...	[more]

BLAST of Lcy03g017660 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6587716.1	1.1e-79	74.79	Homeobox-leucine zipper protein HAT4, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_023531587.1	1.8e-79	74.79	homeobox-leucine zipper protein HAT3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022931479.1	4.1e-79	74.79	homeobox-leucine zipper protein HAT3-like [Cucurbita moschata]	[more]
XP_038879995.1	2.9e-77	69.09	homeobox-leucine zipper protein HOX17-like [Benincasa hispida]	[more]
XP_022921356.1	1.1e-73	76.07	homeobox-leucine zipper protein ATHB-4-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Lcy03g017660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60390.1	1.7e-38	53.22	homeobox-leucine zipper protein 3	[more]
AT4G37790.1	4.9e-38	56.89	Homeobox-leucine zipper protein family	[more]
AT2G44910.1	2.0e-36	48.39	homeobox-leucine zipper protein 4	[more]
AT5G06710.1	2.0e-36	51.35	homeobox from Arabidopsis thaliana	[more]
AT4G16780.1	4.5e-36	50.89	homeobox protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 156..190
None	No IPR available	GENE3D	1.10.10.60		coord: 94..162 e-value: 9.2E-18 score: 65.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..95
None	No IPR available	PANTHER	PTHR45714	FAMILY NOT NAMED	coord: 13..220
None	No IPR available	PANTHER	PTHR45714:SF26	HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN	coord: 13..220
IPR003106	Leucine zipper, homeobox-associated	SMART	SM00340	halz	coord: 157..200 e-value: 1.6E-18 score: 77.5
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 157..189 e-value: 8.3E-9 score: 35.5
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 99..161 e-value: 3.6E-14 score: 63.1
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 101..155 e-value: 1.5E-15 score: 56.8
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 97..157 score: 17.572325
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 101..158 e-value: 1.17718E-12 score: 59.1793
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 132..155
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 86..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g017660.1	Lcy03g017660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding