Lcy03g017230 (gene) Sponge gourd (P93075) v1

Overview
NameLcy03g017230
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionNuclear localized protein
LocationChr03: 51028001 .. 51030683 (+)
RNA-Seq ExpressionLcy03g017230
SyntenyLcy03g017230
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCTTGTTTGTACATTAACGGGCCGGATCCGGCCCAGCCCAATTCAAAACTGCAGCGAGACTTGCCGGGAAAGCAAAAAACGAGACTCTGTAACTAATCGAAATGGATCGTCGTCGTCCAAATCCGCTTCGAACTTCAAACTCCCGCGCTTTTCCTTCTGCCGTCGGCGGCTTCCACAGTTCCATTTCCAATTCAAAGCTCCAAAAATGGAACCATGGGAAGCTCTTGATCTCGATTACTCCGACGTTCACTCTCTTCTCCGCCCTTTGAAGCGCCACCGCAGCCCCCAACCCCTCTCCGCCGCTTCCGCACCTGCCGTGGCCGCTACTTCCACTCTCTCTCTGCCGCTTCTTGAATCCTGCTCTCGCCTCCCTTCCCAATCTAATAATCGCCAATCGCAGTCGAATTTCTCTTCACAGAGTCCAATTTGTCGATCCCAACGAGTTTCCACTGAACTTGAGGCCCCGTCTCCGTCCGCTGCGTCTGCGCGTCTCATTCCTGGACCTGCCGGAGCGGTTCAAGCGGCGATGCAGCGTAGAACCCGCTGTGATAATTGCTTCTATGTCGGCGATGAAGAACCCGTTCCTACGCAGGAGTATATAAGGAGGGTTATGGAAAATGGTGATGAAGAGGACGATGATTTTAATGGCAATCCGTGGCTTTGCGCTTTGGATTTTGTCCGCGGCCTAGGTTCTTTTTTTTTTTTTCCTTTTATTTTCTGTTTGTGTAATGATTTGAGTATGGAATTGTTGGAGATCTAATTCAAGGGTTTTTTTGTAGGTGCGATGGATGGTAATGGAGCTGTGTCTGGAACTCCTTTGACTATTATCAAGAACGGATTTGATGCTGAGAAAGTTGCTCTGGTAATTTTTATTCAAACCCCTCTTTTCGCTTTTCTGGCGGGAAAAAAAATGTAGGAATGTAGATAAATCAACTTGCTGACCTTCAGTCACAATACCATTTACTTTCTGAGAGAAAGAACCGACGATGTTTAAATGATTATTGCTTAAGACCCATTTAGTGGATTCTTCTTTATATCAAGGCATCGATTATTGCTGCATTTCTTCACTTCTTCTTGTAATTGCAGAAAATCAATTAGGGTTTCATGTTTTCTTCTAATTCTATTCGTGTGTCTGTCTTGTTAGGTCGTTGCCATTATCAAATCTTGTACCTCAAATGGTCTGGGTGGTATGATGGTAACTTTGAAGGTTAGGTTTCCTAGTATATACGAAGAAAGTGGTGTTCTAAAATTTCAGTATTCTGTGGATACGAAAATGAGCATGAACTTCTGGTACCAGGATCCAACAGGTACAATAGACGCCAGCATCCACCATAGAGTCATTTCTGAAGGAAATTTTTGGAAGGACTTATCTGTTGGTGCAGTTTTAATATTGCAGAAGGTTTGATTTCGTTATTTCCCGGCACTTGGGTATATTTGATGATTGTGTTGAATTCATTATCTTATTGTGTTTGATAACATTAACTTTTGTCAACTAGAATCACAATTTCTGTCCTCAATGCTCATCAGCTGCATTTATCCTTCAGGTTGCTGTGTTTTCTCCGACACGTTTTGTACATGTGCTCAATGTAACATCAAACAATGTCATCAAGGTATGTTTTGCTTTAAGAACTGTACCAATAGTTAGTAAGCCGTCATACTAAGGAACTACTCTGTTATGAACATTCTGTTTCTAGCCATGTATTCAATGTACACTTTTTCTACATGAAAAAGTTCTGAAAGAAAAAAGGAATCTTTCTAGCTTAGTGGACAAAATAGTTTTTTGTTTTTAACACAAATTGTACATTTTCCTTTTGTTGCAACAAGCAACTATCTCACGGCATCTGTTGTGACAAATCACAAGAGTTGGACAAACTATCCTCTAGTTCTTTCGCTTGGAAACATCTCTGATTGGACAGCCTGTATGCATGCGCATAATGATTATATCAAAGTAAAGTTTGACTCTAAGTTTGTTTGATATGCAAAGGGCCATTGATCTCTGACAAATTTTCTGTGTTGGTTTAAGTACGTACATTTTTGTATTTGTCTATCTTGCTAGGAGAGAATTTGGAGGGGTAATTTACCATTAGTCTTATTTATAATTGGCAATTATTTGCTTATTTGAATGCAGAGTTAGATAGCTGCTGTTGTCCTGAGGAATTATTCTGCCCCTTGTCATTACCAGCTACCATGCCGGCCTGTAGAAAAAAAAACATTGTTTATTGAAGTCTGATTACTGTTGAAGTCACTTCTTTAACTTTTAATTAGATGTTATGACGATTTTGGCTTCCGTATTAGTATACCATATAGTTCAGGCATGGTGTATATATTCCTGCTAGAGAATGTAATAGATGCCTTGATGAAATTATTGTTAGGTCAAAGTTTTCTAGGTTATCACTTCTAGCTCTTCGGAAAACTAATTTTAGCCTTGGAAAATATGGATATAATGTACATATACAGTATTGTCAACTCATGAAAATATGTTTCCCTTTTCTTCTTCGTGATCAACACTAACAAGTTATACAACTGGGGGCATACACTTCGTTTTAAACGTTGGTTTGCTTCTAACCACTCTTTGCTTATGTTTTATCCCGTAGGTTATCTCCAAGGACGGTGGACCTCCTACAAAGCCCAATAATCCTACAGCAATCAGACAGCCTGATTCTATAGCTGGAGGTTGA

mRNA sequence

ATGGGCCTTGTTTGTACATTAACGGGCCGGATCCGGCCCAGCCCAATTCAAAACTGCAGCGAGACTTGCCGGGAAAGCAAAAAACGAGACTCTGTAACTAATCGAAATGGATCGTCGTCGTCCAAATCCGCTTCGAACTTCAAACTCCCGCGCTTTTCCTTCTGCCGTCGGCGGCTTCCACAGTTCCATTTCCAATTCAAAGCTCCAAAAATGGAACCATGGGAAGCTCTTGATCTCGATTACTCCGACGTTCACTCTCTTCTCCGCCCTTTGAAGCGCCACCGCAGCCCCCAACCCCTCTCCGCCGCTTCCGCACCTGCCGTGGCCGCTACTTCCACTCTCTCTCTGCCGCTTCTTGAATCCTGCTCTCGCCTCCCTTCCCAATCTAATAATCGCCAATCGCAGTCGAATTTCTCTTCACAGAGTCCAATTTGTCGATCCCAACGAGTTTCCACTGAACTTGAGGCCCCGTCTCCGTCCGCTGCGTCTGCGCGTCTCATTCCTGGACCTGCCGGAGCGGTTCAAGCGGCGATGCAGCGTAGAACCCGCTGTGATAATTGCTTCTATGTCGGCGATGAAGAACCCGTTCCTACGCAGGAGTATATAAGGAGGGTTATGGAAAATGGTGATGAAGAGGACGATGATTTTAATGGCAATCCGTGGCTTTGCGCTTTGGATTTTGTCCGCGGCCTAGGTGCGATGGATGGTAATGGAGCTGTGTCTGGAACTCCTTTGACTATTATCAAGAACGGATTTGATGCTGAGAAAGTTGCTCTGGTCGTTGCCATTATCAAATCTTGTACCTCAAATGGTCTGGGTGGTATGATGGTAACTTTGAAGGATCCAACAGGTACAATAGACGCCAGCATCCACCATAGAGTCATTTCTGAAGGAAATTTTTGGAAGGACTTATCTGTTGGTGCAGTTTTAATATTGCAGAAGGTTGCTGTGTTTTCTCCGACACGTTTTGTACATGTGCTCAATGTAACATCAAACAATGTCATCAAGGTTATCTCCAAGGACGGTGGACCTCCTACAAAGCCCAATAATCCTACAGCAATCAGACAGCCTGATTCTATAGCTGGAGGTTGA

Coding sequence (CDS)

ATGGGCCTTGTTTGTACATTAACGGGCCGGATCCGGCCCAGCCCAATTCAAAACTGCAGCGAGACTTGCCGGGAAAGCAAAAAACGAGACTCTGTAACTAATCGAAATGGATCGTCGTCGTCCAAATCCGCTTCGAACTTCAAACTCCCGCGCTTTTCCTTCTGCCGTCGGCGGCTTCCACAGTTCCATTTCCAATTCAAAGCTCCAAAAATGGAACCATGGGAAGCTCTTGATCTCGATTACTCCGACGTTCACTCTCTTCTCCGCCCTTTGAAGCGCCACCGCAGCCCCCAACCCCTCTCCGCCGCTTCCGCACCTGCCGTGGCCGCTACTTCCACTCTCTCTCTGCCGCTTCTTGAATCCTGCTCTCGCCTCCCTTCCCAATCTAATAATCGCCAATCGCAGTCGAATTTCTCTTCACAGAGTCCAATTTGTCGATCCCAACGAGTTTCCACTGAACTTGAGGCCCCGTCTCCGTCCGCTGCGTCTGCGCGTCTCATTCCTGGACCTGCCGGAGCGGTTCAAGCGGCGATGCAGCGTAGAACCCGCTGTGATAATTGCTTCTATGTCGGCGATGAAGAACCCGTTCCTACGCAGGAGTATATAAGGAGGGTTATGGAAAATGGTGATGAAGAGGACGATGATTTTAATGGCAATCCGTGGCTTTGCGCTTTGGATTTTGTCCGCGGCCTAGGTGCGATGGATGGTAATGGAGCTGTGTCTGGAACTCCTTTGACTATTATCAAGAACGGATTTGATGCTGAGAAAGTTGCTCTGGTCGTTGCCATTATCAAATCTTGTACCTCAAATGGTCTGGGTGGTATGATGGTAACTTTGAAGGATCCAACAGGTACAATAGACGCCAGCATCCACCATAGAGTCATTTCTGAAGGAAATTTTTGGAAGGACTTATCTGTTGGTGCAGTTTTAATATTGCAGAAGGTTGCTGTGTTTTCTCCGACACGTTTTGTACATGTGCTCAATGTAACATCAAACAATGTCATCAAGGTTATCTCCAAGGACGGTGGACCTCCTACAAAGCCCAATAATCCTACAGCAATCAGACAGCCTGATTCTATAGCTGGAGGTTGA

Protein sequence

MGLVCTLTGRIRPSPIQNCSETCRESKKRDSVTNRNGSSSSKSASNFKLPRFSFCRRRLPQFHFQFKAPKMEPWEALDLDYSDVHSLLRPLKRHRSPQPLSAASAPAVAATSTLSLPLLESCSRLPSQSNNRQSQSNFSSQSPICRSQRVSTELEAPSPSAASARLIPGPAGAVQAAMQRRTRCDNCFYVGDEEPVPTQEYIRRVMENGDEEDDDFNGNPWLCALDFVRGLGAMDGNGAVSGTPLTIIKNGFDAEKVALVVAIIKSCTSNGLGGMMVTLKDPTGTIDASIHHRVISEGNFWKDLSVGAVLILQKVAVFSPTRFVHVLNVTSNNVIKVISKDGGPPTKPNNPTAIRQPDSIAGG
Homology
BLAST of Lcy03g017230 vs. ExPASy Swiss-Prot
Match: Q8N3J3 (Homologous recombination OB-fold protein OS=Homo sapiens OX=9606 GN=HROB PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.2e-09
Identity = 56/203 (27.59%), Postives = 92/203 (45.32%), Query Frame = 0

Query: 162 ASARLIPGPAGAVQAAMQRRTRCDNCFYVGDEEPVPTQEYIRR-----VMENGDEEDDDF 221
           A  R  PGPAG +      R+  D    +      PT   + +     V  +    ++DF
Sbjct: 393 AKTRRFPGPAGILPHQQSGRSLED---IMVSAPQTPTHGALAKFQTEIVASSQASVEEDF 452

Query: 222 NGNPWLCALDFVRGLGAMDGNGAVSGTPLTIIKNGFDA------EKVALVVAIIKSCTSN 281
              PWL  +    GL   D +  +    + ++     A       KV  +  +IKS T +
Sbjct: 453 GRGPWL-TMKSTLGLDERDPSCFLCTYSIVMVLRKQAALKQLPRNKVPNMAVMIKSLTRS 512

Query: 282 GLGGMMVTLKDPTGTIDASIHHRVISEGNFWKDLSVGAVLILQKVAVFSPTRFVHVLNVT 341
            +   +V  KDPTG +  ++H  ++       +L  G+VL+L+++ VFSP+   H LNVT
Sbjct: 513 TMDASVV-FKDPTGEMQGTVHRLLLE--TCQNELKPGSVLLLKQIGVFSPSLRNHYLNVT 572

Query: 342 SNNVIKVISKDGGPPT--KPNNP 352
            NN++ + S D G  +  KP+ P
Sbjct: 573 PNNLVHIYSPDSGDGSFLKPSQP 588

BLAST of Lcy03g017230 vs. ExPASy Swiss-Prot
Match: Q32P12 (Homologous recombination OB-fold protein OS=Mus musculus OX=10090 GN=Hrob PE=1 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 1.7e-05
Identity = 69/263 (26.24%), Postives = 115/263 (43.73%), Query Frame = 0

Query: 96  SPQPLSAASAPAVAATSTLSLPLLESCSRLPSQSNNRQSQSNFSSQSPICRSQRVSTELE 155
           S  P+S+  +P V+     S P+ +   + P  +N+       ++++P           +
Sbjct: 303 SRAPVSSVESP-VSTPRNTSTPVTQPALQTPVVTNHLVQLVTATNRTP-----------Q 362

Query: 156 APS-PS-AASARLIPGPAGAVQAAMQRRTRCDNCFYVGDEEP-VPTQEYIRR-----VME 215
            PS PS  A  R  PGPAG     +  +   +N   +    P  PT   + +        
Sbjct: 363 QPSRPSIRAKTRRFPGPAG----LLPHQHSGENLEEIMVSTPQTPTHGALAKFQTEIATS 422

Query: 216 NGDEEDDDFNGNPWLCALDFVRGLGAMDGNGAVSGTPLTIIK-------NGFDAEKVALV 275
           +    ++DF   PW   L     LG  +G+        +I+              KV  +
Sbjct: 423 SQGSVEEDFGQGPW---LTMKSALGLDEGDPTCFLYTYSIVMVLRKAALKQLPRNKVPNM 482

Query: 276 VAIIKSCTSNGLGGMMVTLKDPTGTIDASIHHRVISEGNFWKDLSVGAVLILQKVAVFSP 335
             +IKS T + +   +V  KDPTG +  ++ HRV+ E     +L  G+VL+L+++ VFSP
Sbjct: 483 AVMIKSLTRSTMDASVV-FKDPTGEMLGTV-HRVLLE-THQSELRPGSVLLLKQIGVFSP 542

Query: 336 TRFVHVLNVTSNNVIKVISKDGG 344
           +   H LNVT NN++ + S D G
Sbjct: 543 SLRNHYLNVTPNNLVHIYSLDSG 543

BLAST of Lcy03g017230 vs. ExPASy Swiss-Prot
Match: Q6GX86 (Homologous recombination OB-fold protein OS=Rattus norvegicus OX=10116 GN=Hrob PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 3.7e-05
Identity = 70/272 (25.74%), Postives = 114/272 (41.91%), Query Frame = 0

Query: 93  RHRSPQPLSAASAPAVAATSTLSLPLLESCSRLPSQSNNRQSQSNFSSQSPICRSQRVS- 152
           R   PQ   ++SA      S    P+    S   +  +   + +  + Q+P+  +  V  
Sbjct: 265 RFSGPQCPHSSSAAFCRGPSPSRAPVSSVESPFSTPRSTSTTVTQPALQTPVVTNHLVQL 324

Query: 153 ------TELEAPSPS-AASARLIPGPAGAVQAAMQRRTRCDNCFYVGDEEP-VPTQEYIR 212
                 T  +   PS  A  R  PGPAG     +  +   +N   +    P  PT   + 
Sbjct: 325 VTATNRTPQQPSRPSIRAKTRRFPGPAG----LLPHQHSGENLEEIMVSTPQTPTHGALA 384

Query: 213 R-----VMENGDEEDDDFNGNPWLCALDFVRGLGAMDGNGAVSGTPLTIIK-------NG 272
           +     V  +    ++DF   PW   L     LG  +G+        +I+          
Sbjct: 385 KFQTEIVTSSQGSVEEDFGRGPW---LTMKSALGLDEGDPTCFLYTYSIVMVLRKAALKQ 444

Query: 273 FDAEKVALVVAIIKSCTSNGLGGMMVTLKDPTGTIDASIHHRVISEGNFWKDLSVGAVLI 332
               KV  +  +IKS T + +   +V  KDPTG +  ++ HRV+ E     +L  G+VL+
Sbjct: 445 LPRNKVPNMAVMIKSLTRSTMDASVV-FKDPTGEMLGTV-HRVLLE-THQNELKPGSVLL 504

Query: 333 LQKVAVFSPTRFVHVLNVTSNNVIKVISKDGG 344
           L+++ VFSP+   H LNVT NN++ + S D G
Sbjct: 505 LKQIGVFSPSLRNHYLNVTPNNLVHIYSLDSG 526

BLAST of Lcy03g017230 vs. ExPASy TrEMBL
Match: A0A6J1E1C3 (uncharacterized protein C17orf53 homolog OS=Cucurbita moschata OX=3662 GN=LOC111429888 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 3.0e-135
Identity = 258/325 (79.38%), Postives = 283/325 (87.08%), Query Frame = 0

Query: 39  SSSKSASNFKLPRFSFCRRRLPQFHFQFKAPKMEPWEALDLDYSDVHSLLRPLKRHRSPQ 98
           SSSKSAS+FK PRF FC RRL QF F+F+A KMEPWEALDLDYSDVHSLLRPLKRHRSPQ
Sbjct: 1   SSSKSASHFKFPRFPFCNRRLHQFPFEFEASKMEPWEALDLDYSDVHSLLRPLKRHRSPQ 60

Query: 99  PLSAASAPAVAATSTLSLPLLESCSRLP----SQSNNRQSQSNFSSQSPICRSQRVSTEL 158
           PLSA      A TSTLSLPLLE+CSR P    SQS N   +S+FSSQ+PICR+QR+STEL
Sbjct: 61  PLSA------APTSTLSLPLLETCSRSPSQPQSQSFNDLFESDFSSQNPICRTQRISTEL 120

Query: 159 EAPSPSAASARLIPGPAGAVQAAMQRRTRCDNCFYVGDEEPVPTQEYIRRVMENGDEEDD 218
           E+P PS AS R+IPGPAGAVQAAMQRRTR +  FYVGDEEP+PTQEYIRRV+ENGD+EDD
Sbjct: 121 ESPCPSGASLRIIPGPAGAVQAAMQRRTRGEKSFYVGDEEPLPTQEYIRRVIENGDDEDD 180

Query: 219 DFNGNPWLCALDFVRGLGAMDGNGAVSGTPLTIIKNGFDAEKVALVVAIIKSCTSNGLGG 278
           DFNGNPW+CALDFVRGL AMDG G ++ TPL+ IKN F+AEKVALVVAIIKSCTSN LGG
Sbjct: 181 DFNGNPWVCALDFVRGLAAMDGKGDLTETPLSSIKNAFNAEKVALVVAIIKSCTSNSLGG 240

Query: 279 MMVTLKDPTGTIDASIHHRVISEGNFWKDLSVGAVLILQKVAVFSPTRFVHVLNVTSNNV 338
           MMV LKDPTGTIDASIHHRVISEGNF KDLSVGAVLILQKVAVFSPTR VHVLNVT++NV
Sbjct: 241 MMVALKDPTGTIDASIHHRVISEGNFGKDLSVGAVLILQKVAVFSPTRSVHVLNVTTSNV 300

Query: 339 IKVISKDGGPPTKPNNPTAIRQPDS 360
           +KVISKD GPP K N+PTAI +PDS
Sbjct: 301 VKVISKDSGPPIKLNSPTAIIRPDS 319

BLAST of Lcy03g017230 vs. ExPASy TrEMBL
Match: A0A6J1JLK0 (uncharacterized protein LOC111485693 OS=Cucurbita maxima OX=3661 GN=LOC111485693 PE=4 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 1.7e-133
Identity = 257/325 (79.08%), Postives = 280/325 (86.15%), Query Frame = 0

Query: 39  SSSKSASNFKLPRFSFCRRRLPQFHFQFKAPKMEPWEALDLDYSDVHSLLRPLKRHRSPQ 98
           S+SKSASNFK PRF+FC RRL QF  +F+A KMEPWEALDLDYSDVHSLLRPLKRHRSPQ
Sbjct: 1   STSKSASNFKFPRFAFCSRRLHQFPSEFEASKMEPWEALDLDYSDVHSLLRPLKRHRSPQ 60

Query: 99  PLSAASAPAVAATSTLSLPLLESCSRLPSQSN----NRQSQSNFSSQSPICRSQRVSTEL 158
           PLSA      A TSTLSLPLLE+CS  PSQ      N  S+S+FSSQ+PICRSQR+S+EL
Sbjct: 61  PLSA------APTSTLSLPLLETCSLSPSQPQSQPFNDLSESDFSSQNPICRSQRISSEL 120

Query: 159 EAPSPSAASARLIPGPAGAVQAAMQRRTRCDNCFYVGDEEPVPTQEYIRRVMENGDEEDD 218
           E+P PS AS R+IPGPAGAVQAAMQRRTR D  FY GDEEPVPTQEYIRRV+ENGDEED 
Sbjct: 121 ESPCPSGASLRIIPGPAGAVQAAMQRRTRGDKSFYGGDEEPVPTQEYIRRVIENGDEEDG 180

Query: 219 DFNGNPWLCALDFVRGLGAMDGNGAVSGTPLTIIKNGFDAEKVALVVAIIKSCTSNGLGG 278
           DFNGNPW+CALDFVRGLGAMDG G ++ TPL+ IKN F+AEKVALVVAIIKSCTSN LGG
Sbjct: 181 DFNGNPWVCALDFVRGLGAMDGKGDLTETPLSSIKNAFNAEKVALVVAIIKSCTSNSLGG 240

Query: 279 MMVTLKDPTGTIDASIHHRVISEGNFWKDLSVGAVLILQKVAVFSPTRFVHVLNVTSNNV 338
           MMV LKDPTGTIDASIHHRVISEGNF KDLSVGAVLILQKVAVFS TR VHVLNVT++NV
Sbjct: 241 MMVALKDPTGTIDASIHHRVISEGNFGKDLSVGAVLILQKVAVFSSTRSVHVLNVTASNV 300

Query: 339 IKVISKDGGPPTKPNNPTAIRQPDS 360
           +KVISKD GPP K N+PTAI +PDS
Sbjct: 301 VKVISKDSGPPIKLNSPTAIIRPDS 319

BLAST of Lcy03g017230 vs. ExPASy TrEMBL
Match: A0A0A0LSW2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025090 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 5.7e-118
Identity = 234/296 (79.05%), Postives = 252/296 (85.14%), Query Frame = 0

Query: 71  MEPWEALDLDYSDVHSLLRPLKRHRSPQPLSAASAPAVAATSTLSLPLLESCSRLPSQS- 130
           MEPWEALDLDYSDVHSLLRPLKRHRSPQPLS    P+ A+TSTLSLPLLE+CS  PSQS 
Sbjct: 1   MEPWEALDLDYSDVHSLLRPLKRHRSPQPLS----PSSASTSTLSLPLLETCSLPPSQSQ 60

Query: 131 ---NNRQSQSNFSSQSPICRSQRVSTELEAPSPSAASARLIPGPAGAVQAAMQRRTRCDN 190
              +N QS+ + S Q+ ICRSQR+STELEA  PS AS R+IPGPAGAVQ AMQRRTR D+
Sbjct: 61  PRVDNLQSELSLSPQASICRSQRISTELEASCPSGASTRIIPGPAGAVQVAMQRRTRGDH 120

Query: 191 CFYVGDEEPVPTQEYIRRVMENGDEEDDDFNGNPWLCALDFVRGLGAMDGNGAVSGTPLT 250
              VGDEEPVPTQEYIRRV+ENGDEEDDDFN + W+CALDFVRG+GAM+GNGAVS TPL 
Sbjct: 121 S-CVGDEEPVPTQEYIRRVIENGDEEDDDFNRSAWVCALDFVRGIGAMEGNGAVSETPLN 180

Query: 251 IIKNGFDAEKVALVVAIIKSCTSNGLGGMMVTLKDPTGTIDASIHHRVISEGNFWKDLSV 310
            IKNGF  EKV  VVAIIKSCTSNGLGGMMV LKDPTGTIDASIHHRVISEGNF KDLSV
Sbjct: 181 SIKNGFIDEKVGFVVAIIKSCTSNGLGGMMVALKDPTGTIDASIHHRVISEGNFGKDLSV 240

Query: 311 GAVLILQKVAVFSPTRFVHVLNVTSNNVIKVISKDGGPPTKPNNPTAIRQPDSIAG 363
           GAVLILQKVAVFSPTR VHVLNVT +NV+KVISKD GP  K N+PTAIRQ DSI G
Sbjct: 241 GAVLILQKVAVFSPTRSVHVLNVTRSNVVKVISKDSGPLIKHNSPTAIRQSDSITG 291

BLAST of Lcy03g017230 vs. ExPASy TrEMBL
Match: A0A5A7USK6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004510 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 2.3e-114
Identity = 229/296 (77.36%), Postives = 247/296 (83.45%), Query Frame = 0

Query: 71  MEPWEALDLDYSDVHSLLRPLKRHRSPQPLSAASAPAVAATSTLSLPLLESCSRLPSQS- 130
           MEPWEALDLDYSDVHSLLRPLKRHRSPQPLS    P+  ATSTLSLPLLE+CS  PS+S 
Sbjct: 1   MEPWEALDLDYSDVHSLLRPLKRHRSPQPLS----PSSTATSTLSLPLLETCSLPPSKSQ 60

Query: 131 ---NNRQSQSNFSSQSPICRSQRVSTELEAPSPSAASARLIPGPAGAVQAAMQRRTRCDN 190
              +N QS+ + S Q+ +CRSQR+ST LEA  PS AS R+IPGPAGAVQ AMQRRTR D+
Sbjct: 61  PRVDNLQSELSLSPQASLCRSQRISTGLEASCPSGASTRIIPGPAGAVQVAMQRRTRGDH 120

Query: 191 CFYVGDEEPVPTQEYIRRVMENGDEEDDDFNGNPWLCALDFVRGLGAMDGNGAVSGTPLT 250
              VGDEEPVPTQEYIRRVMENGDEEDDDFN +PW+CALDFVR +GAM+GNGAVS TPL 
Sbjct: 121 S-CVGDEEPVPTQEYIRRVMENGDEEDDDFNRSPWVCALDFVRSIGAMEGNGAVSETPLN 180

Query: 251 IIKNGFDAEKVALVVAIIKSCTSNGLGGMMVTLKDPTGTIDASIHHRVISEGNFWKDLSV 310
            IKNGF  EKV LVVAIIKSCTSNGLGGMMV LKDPTGTIDASIHHRVISEG F KDLSV
Sbjct: 181 SIKNGFIDEKVGLVVAIIKSCTSNGLGGMMVALKDPTGTIDASIHHRVISEGIFGKDLSV 240

Query: 311 GAVLILQKVAVFSPTRFVHVLNVTSNNVIKVISKDGGPPTKPNNPTAIRQPDSIAG 363
           GAVLILQKVAVFSPTR VHVLNVT +NV+KVISKD GP  K N+PT IR  D I G
Sbjct: 241 GAVLILQKVAVFSPTRSVHVLNVTRSNVVKVISKDSGPLIKHNSPTPIRWSDFITG 291

BLAST of Lcy03g017230 vs. ExPASy TrEMBL
Match: A0A1S3BVT0 (uncharacterized protein C17orf53 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494183 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 2.3e-114
Identity = 229/296 (77.36%), Postives = 247/296 (83.45%), Query Frame = 0

Query: 71  MEPWEALDLDYSDVHSLLRPLKRHRSPQPLSAASAPAVAATSTLSLPLLESCSRLPSQS- 130
           MEPWEALDLDYSDVHSLLRPLKRHRSPQPLS    P+  ATSTLSLPLLE+CS  PS+S 
Sbjct: 1   MEPWEALDLDYSDVHSLLRPLKRHRSPQPLS----PSSTATSTLSLPLLETCSLPPSKSQ 60

Query: 131 ---NNRQSQSNFSSQSPICRSQRVSTELEAPSPSAASARLIPGPAGAVQAAMQRRTRCDN 190
              +N QS+ + S Q+ +CRSQR+ST LEA  PS AS R+IPGPAGAVQ AMQRRTR D+
Sbjct: 61  PRVDNLQSELSLSPQASLCRSQRISTGLEASCPSGASTRIIPGPAGAVQVAMQRRTRGDH 120

Query: 191 CFYVGDEEPVPTQEYIRRVMENGDEEDDDFNGNPWLCALDFVRGLGAMDGNGAVSGTPLT 250
              VGDEEPVPTQEYIRRVMENGDEEDDDFN +PW+CALDFVR +GAM+GNGAVS TPL 
Sbjct: 121 S-CVGDEEPVPTQEYIRRVMENGDEEDDDFNRSPWVCALDFVRSIGAMEGNGAVSETPLN 180

Query: 251 IIKNGFDAEKVALVVAIIKSCTSNGLGGMMVTLKDPTGTIDASIHHRVISEGNFWKDLSV 310
            IKNGF  EKV LVVAIIKSCTSNGLGGMMV LKDPTGTIDASIHHRVISEG F KDLSV
Sbjct: 181 SIKNGFIDEKVGLVVAIIKSCTSNGLGGMMVALKDPTGTIDASIHHRVISEGIFGKDLSV 240

Query: 311 GAVLILQKVAVFSPTRFVHVLNVTSNNVIKVISKDGGPPTKPNNPTAIRQPDSIAG 363
           GAVLILQKVAVFSPTR VHVLNVT +NV+KVISKD GP  K N+PT IR  D I G
Sbjct: 241 GAVLILQKVAVFSPTRSVHVLNVTRSNVVKVISKDSGPLIKHNSPTPIRWSDFITG 291

BLAST of Lcy03g017230 vs. NCBI nr
Match: XP_022921729.1 (uncharacterized protein C17orf53 homolog, partial [Cucurbita moschata])

HSP 1 Score: 491.5 bits (1264), Expect = 6.2e-135
Identity = 258/325 (79.38%), Postives = 283/325 (87.08%), Query Frame = 0

Query: 39  SSSKSASNFKLPRFSFCRRRLPQFHFQFKAPKMEPWEALDLDYSDVHSLLRPLKRHRSPQ 98
           SSSKSAS+FK PRF FC RRL QF F+F+A KMEPWEALDLDYSDVHSLLRPLKRHRSPQ
Sbjct: 1   SSSKSASHFKFPRFPFCNRRLHQFPFEFEASKMEPWEALDLDYSDVHSLLRPLKRHRSPQ 60

Query: 99  PLSAASAPAVAATSTLSLPLLESCSRLP----SQSNNRQSQSNFSSQSPICRSQRVSTEL 158
           PLSA      A TSTLSLPLLE+CSR P    SQS N   +S+FSSQ+PICR+QR+STEL
Sbjct: 61  PLSA------APTSTLSLPLLETCSRSPSQPQSQSFNDLFESDFSSQNPICRTQRISTEL 120

Query: 159 EAPSPSAASARLIPGPAGAVQAAMQRRTRCDNCFYVGDEEPVPTQEYIRRVMENGDEEDD 218
           E+P PS AS R+IPGPAGAVQAAMQRRTR +  FYVGDEEP+PTQEYIRRV+ENGD+EDD
Sbjct: 121 ESPCPSGASLRIIPGPAGAVQAAMQRRTRGEKSFYVGDEEPLPTQEYIRRVIENGDDEDD 180

Query: 219 DFNGNPWLCALDFVRGLGAMDGNGAVSGTPLTIIKNGFDAEKVALVVAIIKSCTSNGLGG 278
           DFNGNPW+CALDFVRGL AMDG G ++ TPL+ IKN F+AEKVALVVAIIKSCTSN LGG
Sbjct: 181 DFNGNPWVCALDFVRGLAAMDGKGDLTETPLSSIKNAFNAEKVALVVAIIKSCTSNSLGG 240

Query: 279 MMVTLKDPTGTIDASIHHRVISEGNFWKDLSVGAVLILQKVAVFSPTRFVHVLNVTSNNV 338
           MMV LKDPTGTIDASIHHRVISEGNF KDLSVGAVLILQKVAVFSPTR VHVLNVT++NV
Sbjct: 241 MMVALKDPTGTIDASIHHRVISEGNFGKDLSVGAVLILQKVAVFSPTRSVHVLNVTTSNV 300

Query: 339 IKVISKDGGPPTKPNNPTAIRQPDS 360
           +KVISKD GPP K N+PTAI +PDS
Sbjct: 301 VKVISKDSGPPIKLNSPTAIIRPDS 319

BLAST of Lcy03g017230 vs. NCBI nr
Match: XP_022988449.1 (uncharacterized protein LOC111485693, partial [Cucurbita maxima])

HSP 1 Score: 485.7 bits (1249), Expect = 3.4e-133
Identity = 257/325 (79.08%), Postives = 280/325 (86.15%), Query Frame = 0

Query: 39  SSSKSASNFKLPRFSFCRRRLPQFHFQFKAPKMEPWEALDLDYSDVHSLLRPLKRHRSPQ 98
           S+SKSASNFK PRF+FC RRL QF  +F+A KMEPWEALDLDYSDVHSLLRPLKRHRSPQ
Sbjct: 1   STSKSASNFKFPRFAFCSRRLHQFPSEFEASKMEPWEALDLDYSDVHSLLRPLKRHRSPQ 60

Query: 99  PLSAASAPAVAATSTLSLPLLESCSRLPSQSN----NRQSQSNFSSQSPICRSQRVSTEL 158
           PLSA      A TSTLSLPLLE+CS  PSQ      N  S+S+FSSQ+PICRSQR+S+EL
Sbjct: 61  PLSA------APTSTLSLPLLETCSLSPSQPQSQPFNDLSESDFSSQNPICRSQRISSEL 120

Query: 159 EAPSPSAASARLIPGPAGAVQAAMQRRTRCDNCFYVGDEEPVPTQEYIRRVMENGDEEDD 218
           E+P PS AS R+IPGPAGAVQAAMQRRTR D  FY GDEEPVPTQEYIRRV+ENGDEED 
Sbjct: 121 ESPCPSGASLRIIPGPAGAVQAAMQRRTRGDKSFYGGDEEPVPTQEYIRRVIENGDEEDG 180

Query: 219 DFNGNPWLCALDFVRGLGAMDGNGAVSGTPLTIIKNGFDAEKVALVVAIIKSCTSNGLGG 278
           DFNGNPW+CALDFVRGLGAMDG G ++ TPL+ IKN F+AEKVALVVAIIKSCTSN LGG
Sbjct: 181 DFNGNPWVCALDFVRGLGAMDGKGDLTETPLSSIKNAFNAEKVALVVAIIKSCTSNSLGG 240

Query: 279 MMVTLKDPTGTIDASIHHRVISEGNFWKDLSVGAVLILQKVAVFSPTRFVHVLNVTSNNV 338
           MMV LKDPTGTIDASIHHRVISEGNF KDLSVGAVLILQKVAVFS TR VHVLNVT++NV
Sbjct: 241 MMVALKDPTGTIDASIHHRVISEGNFGKDLSVGAVLILQKVAVFSSTRSVHVLNVTASNV 300

Query: 339 IKVISKDGGPPTKPNNPTAIRQPDS 360
           +KVISKD GPP K N+PTAI +PDS
Sbjct: 301 VKVISKDSGPPIKLNSPTAIIRPDS 319

BLAST of Lcy03g017230 vs. NCBI nr
Match: KAG6589636.1 (Homologous recombination OB-fold protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 447.2 bits (1149), Expect = 1.3e-121
Identity = 236/293 (80.55%), Postives = 254/293 (86.69%), Query Frame = 0

Query: 71  MEPWEALDLDYSDVHSLLRPLKRHRSPQPLSAASAPAVAATSTLSLPLLESCSRLPSQSN 130
           MEPWEALDLDYSDVHSLLRPLKRHRSPQPLSA      A TSTLSLPLLE+CS  PSQ  
Sbjct: 1   MEPWEALDLDYSDVHSLLRPLKRHRSPQPLSA------APTSTLSLPLLETCSLSPSQPQ 60

Query: 131 ----NRQSQSNFSSQSPICRSQRVSTELEAPSPSAASARLIPGPAGAVQAAMQRRTRCDN 190
               N  S+S+FSSQ+PICRSQR+STELE+P PS AS R+IPGPAGAVQAAMQRRTR D 
Sbjct: 61  SQPFNDLSESDFSSQNPICRSQRISTELESPCPSGASLRIIPGPAGAVQAAMQRRTRGDK 120

Query: 191 CFYVGDEEPVPTQEYIRRVMENGDEEDDDFNGNPWLCALDFVRGLGAMDGNGAVSGTPLT 250
            FYVGDEEPVPTQEYIRRV+ENGDEED DFNGNPW+CALDFVRGL AMDG G ++ TPL+
Sbjct: 121 SFYVGDEEPVPTQEYIRRVIENGDEEDGDFNGNPWVCALDFVRGLAAMDGKGDLTETPLS 180

Query: 251 IIKNGFDAEKVALVVAIIKSCTSNGLGGMMVTLKDPTGTIDASIHHRVISEGNFWKDLSV 310
            IKN F+AEKVALVVAIIKSCTSN LGGM+V LKDPTGTIDASIHHRVISEGNF KDLSV
Sbjct: 181 SIKNAFNAEKVALVVAIIKSCTSNSLGGMVVALKDPTGTIDASIHHRVISEGNFGKDLSV 240

Query: 311 GAVLILQKVAVFSPTRFVHVLNVTSNNVIKVISKDGGPPTKPNNPTAIRQPDS 360
           GAVLILQKVAVFSPTR VHVLNVT++NV+KVISKD GPP K N+ TAI QPDS
Sbjct: 241 GAVLILQKVAVFSPTRSVHVLNVTTSNVVKVISKDSGPPIKLNSTTAIIQPDS 287

BLAST of Lcy03g017230 vs. NCBI nr
Match: XP_023516131.1 (uncharacterized protein C17orf53 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 445.7 bits (1145), Expect = 3.9e-121
Identity = 235/293 (80.20%), Postives = 254/293 (86.69%), Query Frame = 0

Query: 71  MEPWEALDLDYSDVHSLLRPLKRHRSPQPLSAASAPAVAATSTLSLPLLESCSRLPSQSN 130
           MEPWEALDLDYSDVHSLLRPLKRHRSP+ LSA      A TSTLSLPLLE+CS  PSQ  
Sbjct: 1   MEPWEALDLDYSDVHSLLRPLKRHRSPRSLSA------APTSTLSLPLLETCSLSPSQPQ 60

Query: 131 ----NRQSQSNFSSQSPICRSQRVSTELEAPSPSAASARLIPGPAGAVQAAMQRRTRCDN 190
               N   +S+FSSQ+PICRSQR+STELE+P PS AS R+IPGPAGAVQAAMQRRTR + 
Sbjct: 61  SQPCNDLFESDFSSQNPICRSQRISTELESPCPSGASLRIIPGPAGAVQAAMQRRTRGEK 120

Query: 191 CFYVGDEEPVPTQEYIRRVMENGDEEDDDFNGNPWLCALDFVRGLGAMDGNGAVSGTPLT 250
            FYVGDEEPVPTQEYIRRV+ENGDEED DFNGNPW+CALDFVRGLGAMDG G ++ TPL+
Sbjct: 121 SFYVGDEEPVPTQEYIRRVIENGDEEDGDFNGNPWVCALDFVRGLGAMDGRGDLTETPLS 180

Query: 251 IIKNGFDAEKVALVVAIIKSCTSNGLGGMMVTLKDPTGTIDASIHHRVISEGNFWKDLSV 310
            IKN F+AEKVALVVAIIKSCTSN LGGMMV LKDPTGTIDASIHHRVISEGNF KDLSV
Sbjct: 181 SIKNAFNAEKVALVVAIIKSCTSNSLGGMMVALKDPTGTIDASIHHRVISEGNFGKDLSV 240

Query: 311 GAVLILQKVAVFSPTRFVHVLNVTSNNVIKVISKDGGPPTKPNNPTAIRQPDS 360
           GAVLILQKVAVFSPTR VHVLNVT++NV+KVISKD GPP K N+PTAI QPDS
Sbjct: 241 GAVLILQKVAVFSPTRSVHVLNVTTSNVVKVISKDSGPPIKLNSPTAIIQPDS 287

BLAST of Lcy03g017230 vs. NCBI nr
Match: KAG7023324.1 (hypothetical protein SDJN02_14349, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 444.1 bits (1141), Expect = 1.1e-120
Identity = 234/293 (79.86%), Postives = 254/293 (86.69%), Query Frame = 0

Query: 71  MEPWEALDLDYSDVHSLLRPLKRHRSPQPLSAASAPAVAATSTLSLPLLESCSRLP---- 130
           MEPWEALDLDYSDVHSLLRPLKRHRSPQPLSA      A TSTLSLPLLE+CSR P    
Sbjct: 1   MEPWEALDLDYSDVHSLLRPLKRHRSPQPLSA------APTSTLSLPLLETCSRSPSKPQ 60

Query: 131 SQSNNRQSQSNFSSQSPICRSQRVSTELEAPSPSAASARLIPGPAGAVQAAMQRRTRCDN 190
           SQS N   +S+FSSQ+PICR+QR+STELE+P PS AS R+IPGPAGAV AAMQRRTR D 
Sbjct: 61  SQSFNDLFESDFSSQNPICRTQRISTELESPCPSGASLRIIPGPAGAVHAAMQRRTRGDK 120

Query: 191 CFYVGDEEPVPTQEYIRRVMENGDEEDDDFNGNPWLCALDFVRGLGAMDGNGAVSGTPLT 250
            FYVGDEEP+PTQEYIRRV+ENGDEED DFNGNPW+CALDFVRGL AMDG G ++ TPL+
Sbjct: 121 SFYVGDEEPLPTQEYIRRVIENGDEEDGDFNGNPWVCALDFVRGLAAMDGKGDLTETPLS 180

Query: 251 IIKNGFDAEKVALVVAIIKSCTSNGLGGMMVTLKDPTGTIDASIHHRVISEGNFWKDLSV 310
            IKN F+AEKVALVVAIIKSCTSN LGGM+V LKDPTGTIDASIHHRVISEGNF KDLSV
Sbjct: 181 SIKNAFNAEKVALVVAIIKSCTSNSLGGMVVALKDPTGTIDASIHHRVISEGNFGKDLSV 240

Query: 311 GAVLILQKVAVFSPTRFVHVLNVTSNNVIKVISKDGGPPTKPNNPTAIRQPDS 360
           GAVLILQKVAVFSPTR VHVLNVT++NV+KVISKD GPP K N+ TAI QPDS
Sbjct: 241 GAVLILQKVAVFSPTRSVHVLNVTTSNVVKVISKDSGPPIKLNSTTAIIQPDS 287

BLAST of Lcy03g017230 vs. TAIR 10
Match: AT1G48580.1 (unknown protein; Has 91 Blast hits to 91 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). )

HSP 1 Score: 190.7 bits (483), Expect = 2.1e-48
Identity = 122/285 (42.81%), Postives = 162/285 (56.84%), Query Frame = 0

Query: 70  KMEPWEALDLDYSDVHSLLRPLKRH---RSPQPLSAASAPAVAATS-TLSLPLLESCSRL 129
           +++ WEALDL  S++ S LRP KR    RS QP +    P     S T   P L  CS  
Sbjct: 6   EVDQWEALDLGDSELPSFLRPCKRKSPTRSLQPHAQQQNPKAGFNSNTNHRPTLRRCS-- 65

Query: 130 PSQSNNRQSQSNFSSQSPICRSQRVSTELEAPSPSAASARLIPGPAGAVQAAMQRRTRCD 189
                   S   F  +S                    S  LIPGPAG VQ A++R+   D
Sbjct: 66  --------SPDKFLEES-------------------YSRSLIPGPAGVVQVAIRRKMNKD 125

Query: 190 NCFYVGDEEPVPTQEYIRRVMENGDEEDDDFNGNPWLCALDFVRGLGAMDGNGAVSGTPL 249
              +    EP+PTQE++R+  E  D ED DF+ +PW+  +D++R  G +   G   GTP+
Sbjct: 126 PKSFNEHGEPIPTQEFLRKAAEEPDWEDKDFSEDPWVSTVDYIRSEGLLSNGGNAIGTPV 185

Query: 250 TIIKNGFDA-EKVALVVAIIKSCTSNGLGGMMVTLKDPTGTIDASIHHRVISEGNFWKDL 309
           + IK   D+  KV  VVAI+K+CT NGLG +MVTLKDPTGTIDAS+H +VISE  F +D+
Sbjct: 186 SEIKRRCDSWGKVDQVVAIVKTCTPNGLGDVMVTLKDPTGTIDASVHRKVISESEFGRDI 245

Query: 310 SVGAVLILQKVAVFSPTRFVHVLNVTSNNVIKVISKDGGPPTKPN 350
            VGAV+IL++VAV +P+R    LN+T  N+ KVI+KD   P  PN
Sbjct: 246 RVGAVVILKQVAVCAPSRSSTYLNITLKNISKVITKD--TPVLPN 259

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8N3J33.2e-0927.59Homologous recombination OB-fold protein OS=Homo sapiens OX=9606 GN=HROB PE=1 SV... [more]
Q32P121.7e-0526.24Homologous recombination OB-fold protein OS=Mus musculus OX=10090 GN=Hrob PE=1 S... [more]
Q6GX863.7e-0525.74Homologous recombination OB-fold protein OS=Rattus norvegicus OX=10116 GN=Hrob P... [more]
Match NameE-valueIdentityDescription
A0A6J1E1C33.0e-13579.38uncharacterized protein C17orf53 homolog OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1JLK01.7e-13379.08uncharacterized protein LOC111485693 OS=Cucurbita maxima OX=3661 GN=LOC111485693... [more]
A0A0A0LSW25.7e-11879.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025090 PE=4 SV=1[more]
A0A5A7USK62.3e-11477.36Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S3BVT02.3e-11477.36uncharacterized protein C17orf53 homolog isoform X2 OS=Cucumis melo OX=3656 GN=L... [more]
Match NameE-valueIdentityDescription
XP_022921729.16.2e-13579.38uncharacterized protein C17orf53 homolog, partial [Cucurbita moschata][more]
XP_022988449.13.4e-13379.08uncharacterized protein LOC111485693, partial [Cucurbita maxima][more]
KAG6589636.11.3e-12180.55Homologous recombination OB-fold protein, partial [Cucurbita argyrosperma subsp.... [more]
XP_023516131.13.9e-12180.20uncharacterized protein C17orf53 [Cucurbita pepo subsp. pepo][more]
KAG7023324.11.1e-12079.86hypothetical protein SDJN02_14349, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
AT1G48580.12.1e-4842.81unknown protein; Has 91 Blast hits to 91 proteins in 40 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028045Homologous recombination OB-fold proteinPFAMPF15072DUF4539coord: 255..341
e-value: 5.2E-31
score: 106.5
IPR028045Homologous recombination OB-fold proteinPANTHERPTHR14523UNCHARACTERIZED PROTEIN C17ORF53 HOMOLOGcoord: 71..357
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..166
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..45

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy03g017230.1Lcy03g017230.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000725 recombinational repair