Lcy03g017230 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCCTTGTTTGTACATTAACGGGCCGGATCCGGCCCAGCCCAATTCAAAACTGCAGCGAGACTTGCCGGGAAAGCAAAAAACGAGACTCTGTAACTAATCGAAATGGATCGTCGTCGTCCAAATCCGCTTCGAACTTCAAACTCCCGCGCTTTTCCTTCTGCCGTCGGCGGCTTCCACAGTTCCATTTCCAATTCAAAGCTCCAAAAATGGAACCATGGGAAGCTCTTGATCTCGATTACTCCGACGTTCACTCTCTTCTCCGCCCTTTGAAGCGCCACCGCAGCCCCCAACCCCTCTCCGCCGCTTCCGCACCTGCCGTGGCCGCTACTTCCACTCTCTCTCTGCCGCTTCTTGAATCCTGCTCTCGCCTCCCTTCCCAATCTAATAATCGCCAATCGCAGTCGAATTTCTCTTCACAGAGTCCAATTTGTCGATCCCAACGAGTTTCCACTGAACTTGAGGCCCCGTCTCCGTCCGCTGCGTCTGCGCGTCTCATTCCTGGACCTGCCGGAGCGGTTCAAGCGGCGATGCAGCGTAGAACCCGCTGTGATAATTGCTTCTATGTCGGCGATGAAGAACCCGTTCCTACGCAGGAGTATATAAGGAGGGTTATGGAAAATGGTGATGAAGAGGACGATGATTTTAATGGCAATCCGTGGCTTTGCGCTTTGGATTTTGTCCGCGGCCTAGGTTCTTTTTTTTTTTTTCCTTTTATTTTCTGTTTGTGTAATGATTTGAGTATGGAATTGTTGGAGATCTAATTCAAGGGTTTTTTTGTAGGTGCGATGGATGGTAATGGAGCTGTGTCTGGAACTCCTTTGACTATTATCAAGAACGGATTTGATGCTGAGAAAGTTGCTCTGGTAATTTTTATTCAAACCCCTCTTTTCGCTTTTCTGGCGGGAAAAAAAATGTAGGAATGTAGATAAATCAACTTGCTGACCTTCAGTCACAATACCATTTACTTTCTGAGAGAAAGAACCGACGATGTTTAAATGATTATTGCTTAAGACCCATTTAGTGGATTCTTCTTTATATCAAGGCATCGATTATTGCTGCATTTCTTCACTTCTTCTTGTAATTGCAGAAAATCAATTAGGGTTTCATGTTTTCTTCTAATTCTATTCGTGTGTCTGTCTTGTTAGGTCGTTGCCATTATCAAATCTTGTACCTCAAATGGTCTGGGTGGTATGATGGTAACTTTGAAGGTTAGGTTTCCTAGTATATACGAAGAAAGTGGTGTTCTAAAATTTCAGTATTCTGTGGATACGAAAATGAGCATGAACTTCTGGTACCAGGATCCAACAGGTACAATAGACGCCAGCATCCACCATAGAGTCATTTCTGAAGGAAATTTTTGGAAGGACTTATCTGTTGGTGCAGTTTTAATATTGCAGAAGGTTTGATTTCGTTATTTCCCGGCACTTGGGTATATTTGATGATTGTGTTGAATTCATTATCTTATTGTGTTTGATAACATTAACTTTTGTCAACTAGAATCACAATTTCTGTCCTCAATGCTCATCAGCTGCATTTATCCTTCAGGTTGCTGTGTTTTCTCCGACACGTTTTGTACATGTGCTCAATGTAACATCAAACAATGTCATCAAGGTATGTTTTGCTTTAAGAACTGTACCAATAGTTAGTAAGCCGTCATACTAAGGAACTACTCTGTTATGAACATTCTGTTTCTAGCCATGTATTCAATGTACACTTTTTCTACATGAAAAAGTTCTGAAAGAAAAAAGGAATCTTTCTAGCTTAGTGGACAAAATAGTTTTTTGTTTTTAACACAAATTGTACATTTTCCTTTTGTTGCAACAAGCAACTATCTCACGGCATCTGTTGTGACAAATCACAAGAGTTGGACAAACTATCCTCTAGTTCTTTCGCTTGGAAACATCTCTGATTGGACAGCCTGTATGCATGCGCATAATGATTATATCAAAGTAAAGTTTGACTCTAAGTTTGTTTGATATGCAAAGGGCCATTGATCTCTGACAAATTTTCTGTGTTGGTTTAAGTACGTACATTTTTGTATTTGTCTATCTTGCTAGGAGAGAATTTGGAGGGGTAATTTACCATTAGTCTTATTTATAATTGGCAATTATTTGCTTATTTGAATGCAGAGTTAGATAGCTGCTGTTGTCCTGAGGAATTATTCTGCCCCTTGTCATTACCAGCTACCATGCCGGCCTGTAGAAAAAAAAACATTGTTTATTGAAGTCTGATTACTGTTGAAGTCACTTCTTTAACTTTTAATTAGATGTTATGACGATTTTGGCTTCCGTATTAGTATACCATATAGTTCAGGCATGGTGTATATATTCCTGCTAGAGAATGTAATAGATGCCTTGATGAAATTATTGTTAGGTCAAAGTTTTCTAGGTTATCACTTCTAGCTCTTCGGAAAACTAATTTTAGCCTTGGAAAATATGGATATAATGTACATATACAGTATTGTCAACTCATGAAAATATGTTTCCCTTTTCTTCTTCGTGATCAACACTAACAAGTTATACAACTGGGGGCATACACTTCGTTTTAAACGTTGGTTTGCTTCTAACCACTCTTTGCTTATGTTTTATCCCGTAGGTTATCTCCAAGGACGGTGGACCTCCTACAAAGCCCAATAATCCTACAGCAATCAGACAGCCTGATTCTATAGCTGGAGGTTGA ATGGGCCTTGTTTGTACATTAACGGGCCGGATCCGGCCCAGCCCAATTCAAAACTGCAGCGAGACTTGCCGGGAAAGCAAAAAACGAGACTCTGTAACTAATCGAAATGGATCGTCGTCGTCCAAATCCGCTTCGAACTTCAAACTCCCGCGCTTTTCCTTCTGCCGTCGGCGGCTTCCACAGTTCCATTTCCAATTCAAAGCTCCAAAAATGGAACCATGGGAAGCTCTTGATCTCGATTACTCCGACGTTCACTCTCTTCTCCGCCCTTTGAAGCGCCACCGCAGCCCCCAACCCCTCTCCGCCGCTTCCGCACCTGCCGTGGCCGCTACTTCCACTCTCTCTCTGCCGCTTCTTGAATCCTGCTCTCGCCTCCCTTCCCAATCTAATAATCGCCAATCGCAGTCGAATTTCTCTTCACAGAGTCCAATTTGTCGATCCCAACGAGTTTCCACTGAACTTGAGGCCCCGTCTCCGTCCGCTGCGTCTGCGCGTCTCATTCCTGGACCTGCCGGAGCGGTTCAAGCGGCGATGCAGCGTAGAACCCGCTGTGATAATTGCTTCTATGTCGGCGATGAAGAACCCGTTCCTACGCAGGAGTATATAAGGAGGGTTATGGAAAATGGTGATGAAGAGGACGATGATTTTAATGGCAATCCGTGGCTTTGCGCTTTGGATTTTGTCCGCGGCCTAGGTGCGATGGATGGTAATGGAGCTGTGTCTGGAACTCCTTTGACTATTATCAAGAACGGATTTGATGCTGAGAAAGTTGCTCTGGTCGTTGCCATTATCAAATCTTGTACCTCAAATGGTCTGGGTGGTATGATGGTAACTTTGAAGGATCCAACAGGTACAATAGACGCCAGCATCCACCATAGAGTCATTTCTGAAGGAAATTTTTGGAAGGACTTATCTGTTGGTGCAGTTTTAATATTGCAGAAGGTTGCTGTGTTTTCTCCGACACGTTTTGTACATGTGCTCAATGTAACATCAAACAATGTCATCAAGGTTATCTCCAAGGACGGTGGACCTCCTACAAAGCCCAATAATCCTACAGCAATCAGACAGCCTGATTCTATAGCTGGAGGTTGA ATGGGCCTTGTTTGTACATTAACGGGCCGGATCCGGCCCAGCCCAATTCAAAACTGCAGCGAGACTTGCCGGGAAAGCAAAAAACGAGACTCTGTAACTAATCGAAATGGATCGTCGTCGTCCAAATCCGCTTCGAACTTCAAACTCCCGCGCTTTTCCTTCTGCCGTCGGCGGCTTCCACAGTTCCATTTCCAATTCAAAGCTCCAAAAATGGAACCATGGGAAGCTCTTGATCTCGATTACTCCGACGTTCACTCTCTTCTCCGCCCTTTGAAGCGCCACCGCAGCCCCCAACCCCTCTCCGCCGCTTCCGCACCTGCCGTGGCCGCTACTTCCACTCTCTCTCTGCCGCTTCTTGAATCCTGCTCTCGCCTCCCTTCCCAATCTAATAATCGCCAATCGCAGTCGAATTTCTCTTCACAGAGTCCAATTTGTCGATCCCAACGAGTTTCCACTGAACTTGAGGCCCCGTCTCCGTCCGCTGCGTCTGCGCGTCTCATTCCTGGACCTGCCGGAGCGGTTCAAGCGGCGATGCAGCGTAGAACCCGCTGTGATAATTGCTTCTATGTCGGCGATGAAGAACCCGTTCCTACGCAGGAGTATATAAGGAGGGTTATGGAAAATGGTGATGAAGAGGACGATGATTTTAATGGCAATCCGTGGCTTTGCGCTTTGGATTTTGTCCGCGGCCTAGGTGCGATGGATGGTAATGGAGCTGTGTCTGGAACTCCTTTGACTATTATCAAGAACGGATTTGATGCTGAGAAAGTTGCTCTGGTCGTTGCCATTATCAAATCTTGTACCTCAAATGGTCTGGGTGGTATGATGGTAACTTTGAAGGATCCAACAGGTACAATAGACGCCAGCATCCACCATAGAGTCATTTCTGAAGGAAATTTTTGGAAGGACTTATCTGTTGGTGCAGTTTTAATATTGCAGAAGGTTGCTGTGTTTTCTCCGACACGTTTTGTACATGTGCTCAATGTAACATCAAACAATGTCATCAAGGTTATCTCCAAGGACGGTGGACCTCCTACAAAGCCCAATAATCCTACAGCAATCAGACAGCCTGATTCTATAGCTGGAGGTTGA MGLVCTLTGRIRPSPIQNCSETCRESKKRDSVTNRNGSSSSKSASNFKLPRFSFCRRRLPQFHFQFKAPKMEPWEALDLDYSDVHSLLRPLKRHRSPQPLSAASAPAVAATSTLSLPLLESCSRLPSQSNNRQSQSNFSSQSPICRSQRVSTELEAPSPSAASARLIPGPAGAVQAAMQRRTRCDNCFYVGDEEPVPTQEYIRRVMENGDEEDDDFNGNPWLCALDFVRGLGAMDGNGAVSGTPLTIIKNGFDAEKVALVVAIIKSCTSNGLGGMMVTLKDPTGTIDASIHHRVISEGNFWKDLSVGAVLILQKVAVFSPTRFVHVLNVTSNNVIKVISKDGGPPTKPNNPTAIRQPDSIAGG Homology
BLAST of Lcy03g017230 vs. ExPASy Swiss-Prot
Match: Q8N3J3 (Homologous recombination OB-fold protein OS=Homo sapiens OX=9606 GN=HROB PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 3.2e-09 Identity = 56/203 (27.59%), Postives = 92/203 (45.32%), Query Frame = 0
BLAST of Lcy03g017230 vs. ExPASy Swiss-Prot
Match: Q32P12 (Homologous recombination OB-fold protein OS=Mus musculus OX=10090 GN=Hrob PE=1 SV=2) HSP 1 Score: 52.0 bits (123), Expect = 1.7e-05 Identity = 69/263 (26.24%), Postives = 115/263 (43.73%), Query Frame = 0
BLAST of Lcy03g017230 vs. ExPASy Swiss-Prot
Match: Q6GX86 (Homologous recombination OB-fold protein OS=Rattus norvegicus OX=10116 GN=Hrob PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 3.7e-05 Identity = 70/272 (25.74%), Postives = 114/272 (41.91%), Query Frame = 0
BLAST of Lcy03g017230 vs. ExPASy TrEMBL
Match: A0A6J1E1C3 (uncharacterized protein C17orf53 homolog OS=Cucurbita moschata OX=3662 GN=LOC111429888 PE=4 SV=1) HSP 1 Score: 491.5 bits (1264), Expect = 3.0e-135 Identity = 258/325 (79.38%), Postives = 283/325 (87.08%), Query Frame = 0
BLAST of Lcy03g017230 vs. ExPASy TrEMBL
Match: A0A6J1JLK0 (uncharacterized protein LOC111485693 OS=Cucurbita maxima OX=3661 GN=LOC111485693 PE=4 SV=1) HSP 1 Score: 485.7 bits (1249), Expect = 1.7e-133 Identity = 257/325 (79.08%), Postives = 280/325 (86.15%), Query Frame = 0
BLAST of Lcy03g017230 vs. ExPASy TrEMBL
Match: A0A0A0LSW2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025090 PE=4 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 5.7e-118 Identity = 234/296 (79.05%), Postives = 252/296 (85.14%), Query Frame = 0
BLAST of Lcy03g017230 vs. ExPASy TrEMBL
Match: A0A5A7USK6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004510 PE=4 SV=1) HSP 1 Score: 422.2 bits (1084), Expect = 2.3e-114 Identity = 229/296 (77.36%), Postives = 247/296 (83.45%), Query Frame = 0
BLAST of Lcy03g017230 vs. ExPASy TrEMBL
Match: A0A1S3BVT0 (uncharacterized protein C17orf53 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494183 PE=4 SV=1) HSP 1 Score: 422.2 bits (1084), Expect = 2.3e-114 Identity = 229/296 (77.36%), Postives = 247/296 (83.45%), Query Frame = 0
BLAST of Lcy03g017230 vs. NCBI nr
Match: XP_022921729.1 (uncharacterized protein C17orf53 homolog, partial [Cucurbita moschata]) HSP 1 Score: 491.5 bits (1264), Expect = 6.2e-135 Identity = 258/325 (79.38%), Postives = 283/325 (87.08%), Query Frame = 0
BLAST of Lcy03g017230 vs. NCBI nr
Match: XP_022988449.1 (uncharacterized protein LOC111485693, partial [Cucurbita maxima]) HSP 1 Score: 485.7 bits (1249), Expect = 3.4e-133 Identity = 257/325 (79.08%), Postives = 280/325 (86.15%), Query Frame = 0
BLAST of Lcy03g017230 vs. NCBI nr
Match: KAG6589636.1 (Homologous recombination OB-fold protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 447.2 bits (1149), Expect = 1.3e-121 Identity = 236/293 (80.55%), Postives = 254/293 (86.69%), Query Frame = 0
BLAST of Lcy03g017230 vs. NCBI nr
Match: XP_023516131.1 (uncharacterized protein C17orf53 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 445.7 bits (1145), Expect = 3.9e-121 Identity = 235/293 (80.20%), Postives = 254/293 (86.69%), Query Frame = 0
BLAST of Lcy03g017230 vs. NCBI nr
Match: KAG7023324.1 (hypothetical protein SDJN02_14349, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 444.1 bits (1141), Expect = 1.1e-120 Identity = 234/293 (79.86%), Postives = 254/293 (86.69%), Query Frame = 0
BLAST of Lcy03g017230 vs. TAIR 10
Match: AT1G48580.1 (unknown protein; Has 91 Blast hits to 91 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). ) HSP 1 Score: 190.7 bits (483), Expect = 2.1e-48 Identity = 122/285 (42.81%), Postives = 162/285 (56.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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