Lcy03g016900 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g016900
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Stress up-regulated Nod 19
Location	Chr03: 50685491 .. 50686258 (-)
RNA-Seq Expression	Lcy03g016900
Synteny	Lcy03g016900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGCAGTGCTGGTTGATCCCTTTTGCACTAATAGCGACGACTCTGCTGTGGTTGGAAGCTGCAGAAATAAACAACCATATGATCATAAGAAGCAAAACATTTTCATCCCCATCATTCCCCTCGACGCCTGGTTCAGTGGTCGAGAAATTCTACTACAACATCGACTTTCCAAAAGGCCATATTGCCATGAAGAGCTTCGATGTCGAAGTCGTAGATGAAACAGGCAATCAAGTGCCACTTCTCGAAACATATCTTCACCATTGGGCACTGGTGAGGTACTATCAACACAAAAATGCTCCAAACCCAAGTACCATAATATCTCATTCACTCATCTTCAGGAACCAGACTACATCATTGCGAGCAACGATGGAGTCTGCCAGAAGCACACTTTCCCCGAATACTATGGTAAAGGGCCTGATCAAGAGCAAACATTGACATTTCTTCCAAACCCATATGGAATAGAGGTTGGCAATGTCGCACGAGTTCCTTTGGGATATGAAGAAAGGTGTGGTGTCTTAATGTGCATGCCATAGATACTAGGGGCGTGGAGGAGGAAAGGATTCTGGGTATGTGGTTGGAATGTCAAGTTGTTATCCAGAGCCAGGCTCTGTGAAGATTAAGAATGAAGAATTATTGACAGTTGAATGTAAATATGGTGGTGAACAAAAGCACACGGGCGTTATGGGTCTATTCCATATTATGGTTGCCCACAAATTACCAAAGCCTTTGCTTACCATGAAAGCATCCGCCGACACCAACGTGTAA

mRNA sequence

ATGTGGCAGTGCTGGTTGATCCCTTTTGCACTAATAGCGACGACTCTGCTGTGGTTGGAAGCTGCAGAAATAAACAACCATATGATCATAAGAAGCAAAACATTTTCATCCCCATCATTCCCCTCGACGCCTGGTTCAGTGGTCGAGAAATTCTACTACAACATCGACTTTCCAAAAGGCCATATTGCCATGAAGAGCTTCGATGTCGAAGTCGTAGATGAAACAGGCAATCAAGTGCCACTTCTCGAAACATATCTTCACCATTGGGCACTGGAACCAGACTACATCATTGCGAGCAACGATGGAGTCTGCCAGAAGCACACTTTCCCCGAATACTATGGTAAAGGGCCTGATCAAGAGCAAACATTGACATTTCTTCCAAACCCATATGGAATAGAGGTTGGCAATGTCGCACGAGTTCCTTTGGGATATGAAGAAAGTTGTTATCCAGAGCCAGGCTCTGTGAAGATTAAGAATGAAGAATTATTGACAGTTGAATGTAAATATGGTGGTGAACAAAAGCACACGGGCGTTATGGGTCTATTCCATATTATGGTTGCCCACAAATTACCAAAGCCTTTGCTTACCATGAAAGCATCCGCCGACACCAACGTGTAA

Coding sequence (CDS)

ATGTGGCAGTGCTGGTTGATCCCTTTTGCACTAATAGCGACGACTCTGCTGTGGTTGGAAGCTGCAGAAATAAACAACCATATGATCATAAGAAGCAAAACATTTTCATCCCCATCATTCCCCTCGACGCCTGGTTCAGTGGTCGAGAAATTCTACTACAACATCGACTTTCCAAAAGGCCATATTGCCATGAAGAGCTTCGATGTCGAAGTCGTAGATGAAACAGGCAATCAAGTGCCACTTCTCGAAACATATCTTCACCATTGGGCACTGGAACCAGACTACATCATTGCGAGCAACGATGGAGTCTGCCAGAAGCACACTTTCCCCGAATACTATGGTAAAGGGCCTGATCAAGAGCAAACATTGACATTTCTTCCAAACCCATATGGAATAGAGGTTGGCAATGTCGCACGAGTTCCTTTGGGATATGAAGAAAGTTGTTATCCAGAGCCAGGCTCTGTGAAGATTAAGAATGAAGAATTATTGACAGTTGAATGTAAATATGGTGGTGAACAAAAGCACACGGGCGTTATGGGTCTATTCCATATTATGGTTGCCCACAAATTACCAAAGCCTTTGCTTACCATGAAAGCATCCGCCGACACCAACGTGTAA

Protein sequence

MWQCWLIPFALIATTLLWLEAAEINNHMIIRSKTFSSPSFPSTPGSVVEKFYYNIDFPKGHIAMKSFDVEVVDETGNQVPLLETYLHHWALEPDYIIASNDGVCQKHTFPEYYGKGPDQEQTLTFLPNPYGIEVGNVARVPLGYEESCYPEPGSVKIKNEELLTVECKYGGEQKHTGVMGLFHIMVAHKLPKPLLTMKASADTNV

Homology

[Close]

BLAST of Lcy03g016900 vs. ExPASy TrEMBL
Match: A0A6J1JLU8 (uncharacterized protein LOC111485742 OS=Cucurbita maxima OX=3661 GN=LOC111485742 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 7.6e-43
Identity = 89/170 (52.35%), Postives = 111/170 (65.29%), Query Frame = 0


Query: 1   MWQ--CWLIPFALIATTLLWLEAAEINNHMIIRSKTFSSPSFPSTPGSVVEKFYYNIDFP 60
           MW+  C L+  ALI   +  L  A IN +  I++K+F +P F  TPGSVVE+FYY+ +FP
Sbjct: 1   MWRHCCCLLSVALIMAMIPRLNTAVINKNQAIKTKSFLTPLFTMTPGSVVERFYYSTNFP 60

Query: 61  KGHIAMKSFDVEVVDETGNQVPLLETYLHHWAL----------------------EPDYI 120
           K HIA+K FDVEVVD+  N VPL ETYLHHWA+                      EP+++
Sbjct: 61  KAHIALKGFDVEVVDDASNPVPLFETYLHHWAISRYYQHKDAKDPNTNVSFTQINEPNFM 120

Query: 121 IASNDGVCQKHTFPEYYGKGPDQEQTLTFLPNPYGIEVGNVARVPLGYEE 147
           IA N+GVCQKH FP++YG G D  +T +FLPNPYGIEVGN   VPLGYEE
Sbjct: 121 IAGNNGVCQKHVFPQFYGTGADSRRTSSFLPNPYGIEVGNEVEVPLGYEE 170

[Close]

BLAST of Lcy03g016900 vs. ExPASy TrEMBL
Match: A0A6J1JLU8 (uncharacterized protein LOC111485742 OS=Cucurbita maxima OX=3661 GN=LOC111485742 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 3.8e-10
Identity = 40/79 (50.63%), Postives = 50/79 (63.29%), Query Frame = 0


Query: 130 YGIEVGNVARVPLGYEESCYPEPGSVKIKNEELLTVECKYGGEQKHTGVMGLFHIMVAHK 189
           +G E+GN     +G   +CYP+PGSVKI   E+L++  KY   Q H GVMGLFHIMVA K
Sbjct: 353 HGSEIGNEDGYVVGM-STCYPQPGSVKINKGEMLSLISKYEPAQNHVGVMGLFHIMVAQK 412

Query: 190 LPKPLLTM---KASADTNV 206
           LP  LL M   K + DT +
Sbjct: 413 LPNSLLHMVPFKLADDTTL 430

HSP 2 Score: 183.3 bits (464), Expect = 9.9e-43
Identity = 87/165 (52.73%), Postives = 107/165 (64.85%), Query Frame = 0


Query: 4   CWLIPFALIATTLLWLEAAEINNHMIIRSKTFSSPSFPSTPGSVVEKFYYNIDFPKGHIA 63
           C L+  ALI   +  L  A IN +  I++K+F +PSF  TPGSVVE+FYY+ +FPK HIA
Sbjct: 6   CCLLSLALIMAMIPRLNTAVINKNQAIKTKSFLTPSFTMTPGSVVERFYYSTNFPKAHIA 65

Query: 64  MKSFDVEVVDETGNQVPLLETYLHHWAL----------------------EPDYIIASND 123
           +K FDVEVVD+ GN VPL ETYLHHW +                      EP+++IA N+
Sbjct: 66  LKGFDVEVVDDAGNPVPLFETYLHHWGILRYYQHKDAKDPNTNVSFTQINEPNFLIAGNN 125

Query: 124 GVCQKHTFPEYYGKGPDQEQTLTFLPNPYGIEVGNVARVPLGYEE 147
           GVCQKH  P +YG G D  +T +FLPNPYGIEVGN   VPLGYEE
Sbjct: 126 GVCQKHVLPHFYGTGADSRRTSSFLPNPYGIEVGNEVEVPLGYEE 170

[Close]

BLAST of Lcy03g016900 vs. ExPASy TrEMBL
Match: A0A6J1E2R7 (uncharacterized protein LOC111430047 OS=Cucurbita moschata OX=3662 GN=LOC111430047 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.1e-09
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 0


Query: 130 YGIEVGNVARVPLGYEESCYPEPGSVKIKNEELLTVECKYGGEQKHTGVMGLFHIMVAHK 189
           +G EVGN     +G   +CYP+PGSVKI   E+L++  KY   Q H GVMGLFHIMVA +
Sbjct: 353 HGSEVGNEDGYVVGM-STCYPQPGSVKINRGEMLSLVSKYEPAQNHVGVMGLFHIMVAQR 412

Query: 190 LPKPLLTM 198
           LP  LL M
Sbjct: 413 LPNSLLHM 419

HSP 2 Score: 177.6 bits (449), Expect = 5.5e-41
Identity = 89/197 (45.18%), Postives = 119/197 (60.41%), Query Frame = 0


Query: 3   QC--WLIPFALIATTLLWLEAAEIN-----NHMIIRSKTFSSPSFPSTPGSVVEKFYYNI 62
           QC  WL+ F+ +   + +LE    N     + +II++KT+ +P F   PG VVE+F+YN 
Sbjct: 6   QCFRWLLLFSSVGIMIPYLEGVVTNKKNDDHQVIIKTKTYRTPLFTLKPGYVVERFFYNT 65

Query: 63  DFPKGHIAMKSFDVEVVDETGNQVPLLETYLHHWAL----------------------EP 122
           +FPKGHIAMKSFDVEVVDE  N +PL ETYLHHW +                      EP
Sbjct: 66  NFPKGHIAMKSFDVEVVDEEANPIPLFETYLHHWGITRYYQHKDTKDPNINTSFTQLHEP 125

Query: 123 DYIIASNDGVCQKHTFPEYYGKGPDQEQTLTFLPNPYGIEVGNVARVPLGYEESCYPEPG 169
           ++I+A N+GVCQKH  P+++G G D  +T +FLPNPYGIEVGN   VPLGYEE       
Sbjct: 126 NFIVAGNNGVCQKHALPQFFGTGADSRKTSSFLPNPYGIEVGNEKEVPLGYEEKWVLNIH 185

[Close]

BLAST of Lcy03g016900 vs. ExPASy TrEMBL
Match: A0A5D3C682 (SURNod19 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001540 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.9e-10
Identity = 40/88 (45.45%), Postives = 52/88 (59.09%), Query Frame = 0


Query: 116 GPDQEQTLTFLP-----NPYGIEVGNVARVPLGYEESCYPEPGSVKIKNEELLTVECKYG 175
           G D+ +  +  P     N  G E G V  +      +CYP+PGSVKI N+E+LT+  KY 
Sbjct: 351 GEDERELCSSSPIYGNGNEIGNEKGYVVEM-----STCYPKPGSVKINNKEMLTLISKYD 410

Query: 176 GEQKHTGVMGLFHIMVAHKLPKPLLTMK 199
             Q H GVMGLFHIMVA KLP  ++ M+
Sbjct: 411 PSQTHIGVMGLFHIMVAQKLPNSIIQME 433

HSP 2 Score: 177.6 bits (449), Expect = 5.5e-41
Identity = 89/197 (45.18%), Postives = 119/197 (60.41%), Query Frame = 0


Query: 3   QC--WLIPFALIATTLLWLEAAEIN-----NHMIIRSKTFSSPSFPSTPGSVVEKFYYNI 62
           QC  WL+ F+ +   + +LE    N     + +II++KT+ +P F   PG VVE+F+YN 
Sbjct: 6   QCFRWLLLFSSVGIMIPYLEGVVTNKKNDDHQVIIKTKTYRTPLFTLKPGYVVERFFYNT 65

Query: 63  DFPKGHIAMKSFDVEVVDETGNQVPLLETYLHHWAL----------------------EP 122
           +FPKGHIAMKSFDVEVVDE  N +PL ETYLHHW +                      EP
Sbjct: 66  NFPKGHIAMKSFDVEVVDEEANPIPLFETYLHHWGITRYYQHKDTKDPNINTSFTQLHEP 125

Query: 123 DYIIASNDGVCQKHTFPEYYGKGPDQEQTLTFLPNPYGIEVGNVARVPLGYEESCYPEPG 169
           ++I+A N+GVCQKH  P+++G G D  +T +FLPNPYGIEVGN   VPLGYEE       
Sbjct: 126 NFIVAGNNGVCQKHALPQFFGTGADSRKTSSFLPNPYGIEVGNEKEVPLGYEEKWVLNIH 185

[Close]

BLAST of Lcy03g016900 vs. ExPASy TrEMBL
Match: A0A1S3C023 (uncharacterized protein LOC103495342 OS=Cucumis melo OX=3656 GN=LOC103495342 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.9e-10
Identity = 40/88 (45.45%), Postives = 52/88 (59.09%), Query Frame = 0


Query: 116 GPDQEQTLTFLP-----NPYGIEVGNVARVPLGYEESCYPEPGSVKIKNEELLTVECKYG 175
           G D+ +  +  P     N  G E G V  +      +CYP+PGSVKI N+E+LT+  KY 
Sbjct: 351 GEDERELCSSSPIYGNGNEIGNEKGYVVEM-----STCYPKPGSVKINNKEMLTLISKYD 410

Query: 176 GEQKHTGVMGLFHIMVAHKLPKPLLTMK 199
             Q H GVMGLFHIMVA KLP  ++ M+
Sbjct: 411 PSQTHIGVMGLFHIMVAQKLPNSIIQME 433

HSP 2 Score: 176.4 bits (446), Expect = 1.2e-40
Identity = 88/168 (52.38%), Postives = 113/168 (67.26%), Query Frame = 0


Query: 6   LIPFALIATTLL-WLEAAEINN----HMIIRSKTFSSPSFPSTPGSVVEKFYYNIDFPKG 65
           L+P  L+  T++   EA  INN    +M+I+++TFSSPSF +TPG V+EKF+YNI+FPK 
Sbjct: 2   LLPLVLVMMTMISCSEAVGINNNNPMNMVIKTQTFSSPSFTTTPGLVIEKFFYNINFPKS 61

Query: 66  HIAMKSFDVEVVDETGNQVPLLETYLHHWAL----------------------EPDYIIA 125
           HIA+KSFDVEVVDE+GNQVPL +TYLHHWAL                      EP++IIA
Sbjct: 62  HIAIKSFDVEVVDESGNQVPLPQTYLHHWALVRYYQHKNATNPTINTVFNELQEPNFIIA 121

Query: 126 SNDGVCQKHTFPEYYGKGPDQEQTLTFLPNPYGIEVGNVARVPLGYEE 147
           SN+GVC ++  P YY  G +  +  TFLP+PYGIEVGN   +P  YEE
Sbjct: 122 SNNGVCGRNVLPTYYAMGSESRKLSTFLPHPYGIEVGNPKEIPADYEE 169

[Close]

BLAST of Lcy03g016900 vs. NCBI nr
Match: XP_022988529.1 (uncharacterized protein LOC111485742 [Cucurbita maxima])

HSP 1 Score: 183.7 bits (465), Expect = 1.6e-42
Identity = 89/170 (52.35%), Postives = 111/170 (65.29%), Query Frame = 0


Query: 1   MWQ--CWLIPFALIATTLLWLEAAEINNHMIIRSKTFSSPSFPSTPGSVVEKFYYNIDFP 60
           MW+  C L+  ALI   +  L  A IN +  I++K+F +P F  TPGSVVE+FYY+ +FP
Sbjct: 1   MWRHCCCLLSVALIMAMIPRLNTAVINKNQAIKTKSFLTPLFTMTPGSVVERFYYSTNFP 60

Query: 61  KGHIAMKSFDVEVVDETGNQVPLLETYLHHWAL----------------------EPDYI 120
           K HIA+K FDVEVVD+  N VPL ETYLHHWA+                      EP+++
Sbjct: 61  KAHIALKGFDVEVVDDASNPVPLFETYLHHWAISRYYQHKDAKDPNTNVSFTQINEPNFM 120

Query: 121 IASNDGVCQKHTFPEYYGKGPDQEQTLTFLPNPYGIEVGNVARVPLGYEE 147
           IA N+GVCQKH FP++YG G D  +T +FLPNPYGIEVGN   VPLGYEE
Sbjct: 121 IAGNNGVCQKHVFPQFYGTGADSRRTSSFLPNPYGIEVGNEVEVPLGYEE 170

[Close]

BLAST of Lcy03g016900 vs. NCBI nr
Match: XP_022988529.1 (uncharacterized protein LOC111485742 [Cucurbita maxima])

HSP 1 Score: 75.1 bits (183), Expect = 7.9e-10
Identity = 40/79 (50.63%), Postives = 50/79 (63.29%), Query Frame = 0


Query: 130 YGIEVGNVARVPLGYEESCYPEPGSVKIKNEELLTVECKYGGEQKHTGVMGLFHIMVAHK 189
           +G E+GN     +G   +CYP+PGSVKI   E+L++  KY   Q H GVMGLFHIMVA K
Sbjct: 353 HGSEIGNEDGYVVGM-STCYPQPGSVKINKGEMLSLISKYEPAQNHVGVMGLFHIMVAQK 412

Query: 190 LPKPLLTM---KASADTNV 206
           LP  LL M   K + DT +
Sbjct: 413 LPNSLLHMVPFKLADDTTL 430

HSP 2 Score: 183.3 bits (464), Expect = 2.1e-42
Identity = 87/165 (52.73%), Postives = 107/165 (64.85%), Query Frame = 0


Query: 4   CWLIPFALIATTLLWLEAAEINNHMIIRSKTFSSPSFPSTPGSVVEKFYYNIDFPKGHIA 63
           C L+  ALI   +  L  A IN +  I++K+F +PSF  TPGSVVE+FYY+ +FPK HIA
Sbjct: 6   CCLLSLALIMAMIPRLNTAVINKNQAIKTKSFLTPSFTMTPGSVVERFYYSTNFPKAHIA 65

Query: 64  MKSFDVEVVDETGNQVPLLETYLHHWAL----------------------EPDYIIASND 123
           +K FDVEVVD+ GN VPL ETYLHHW +                      EP+++IA N+
Sbjct: 66  LKGFDVEVVDDAGNPVPLFETYLHHWGILRYYQHKDAKDPNTNVSFTQINEPNFLIAGNN 125

Query: 124 GVCQKHTFPEYYGKGPDQEQTLTFLPNPYGIEVGNVARVPLGYEE 147
           GVCQKH  P +YG G D  +T +FLPNPYGIEVGN   VPLGYEE
Sbjct: 126 GVCQKHVLPHFYGTGADSRRTSSFLPNPYGIEVGNEVEVPLGYEE 170

[Close]

BLAST of Lcy03g016900 vs. NCBI nr
Match: XP_023515680.1 (uncharacterized protein LOC111779774 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 71.6 bits (174), Expect = 8.7e-09
Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 0


Query: 130 YGIEVGNVARVPLGYEESCYPEPGSVKIKNEELLTVECKYGGEQKHTGVMGLFHIMVAHK 189
           +G E+GN     +G   +CYP+PGSV+I   E+L++  KY   Q H GVMGLFHIMVA +
Sbjct: 353 HGSEIGNEDGYVVGM-STCYPQPGSVRINRGEMLSLISKYEPAQNHVGVMGLFHIMVAQR 412

Query: 190 LPKPLLTM 198
           LP  LL M
Sbjct: 413 LPNSLLHM 419

HSP 2 Score: 183.3 bits (464), Expect = 2.1e-42
Identity = 87/165 (52.73%), Postives = 107/165 (64.85%), Query Frame = 0


Query: 4   CWLIPFALIATTLLWLEAAEINNHMIIRSKTFSSPSFPSTPGSVVEKFYYNIDFPKGHIA 63
           C L+  ALI   +  L  A IN +  I++K+F +PSF  TPGSVVE+FYY+ +FPK HIA
Sbjct: 6   CCLLSLALIMAMIPRLNTAVINKNQAIKTKSFLTPSFTMTPGSVVERFYYSTNFPKAHIA 65

Query: 64  MKSFDVEVVDETGNQVPLLETYLHHWAL----------------------EPDYIIASND 123
           +K FDVEVVD+ GN VPL ETYLHHW +                      EP+++IA N+
Sbjct: 66  LKGFDVEVVDDAGNPVPLFETYLHHWGILRYYQHKDAKDPNTNVSFTQINEPNFLIAGNN 125

Query: 124 GVCQKHTFPEYYGKGPDQEQTLTFLPNPYGIEVGNVARVPLGYEE 147
           GVCQKH  P +YG G D  +T +FLPNPYGIEVGN   VPLGYEE
Sbjct: 126 GVCQKHVLPHFYGTGADSRRTSSFLPNPYGIEVGNEVEVPLGYEE 170

[Close]

BLAST of Lcy03g016900 vs. NCBI nr
Match: XP_022921941.1 (uncharacterized protein LOC111430047 [Cucurbita moschata])

HSP 1 Score: 73.6 bits (179), Expect = 2.3e-09
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 0


Query: 130 YGIEVGNVARVPLGYEESCYPEPGSVKIKNEELLTVECKYGGEQKHTGVMGLFHIMVAHK 189
           +G EVGN     +G   +CYP+PGSVKI   E+L++  KY   Q H GVMGLFHIMVA +
Sbjct: 353 HGSEVGNEDGYVVGM-STCYPQPGSVKINRGEMLSLVSKYEPAQNHVGVMGLFHIMVAQR 412

Query: 190 LPKPLLTM 198
           LP  LL M
Sbjct: 413 LPNSLLHM 419

HSP 2 Score: 178.3 bits (451), Expect = 6.6e-41
Identity = 95/191 (49.74%), Postives = 121/191 (63.35%), Query Frame = 0


Query: 6   LIPFALI-ATTLLWLEAAEINN----HMIIRSKTFSSPSFPSTPGSVVEKFYYNIDFPKG 65
           L+PFA+I AT +  LEA   N+    +M+I+++TFSSPSF  TPG V+EKFYYNI FPK 
Sbjct: 2   LLPFAMIMATMISCLEAVGTNSNNPMNMMIKTQTFSSPSFTMTPGLVIEKFYYNITFPKS 61

Query: 66  HIAMKSFDVEVVDETGNQVPLLETYLHHWAL----------------------EPDYIIA 125
           HIA+KSF+VEVVDE+GNQ+PL ETYLHHWAL                      EP++IIA
Sbjct: 62  HIAIKSFEVEVVDESGNQIPLPETYLHHWALVRYYQHKNATNPTINTAYDQLQEPNFIIA 121

Query: 126 SNDGVCQKHTFPEYYGKGPDQEQTLTFLPNPYGIEVGNVARVPLGYEESCYPEPGSVKIK 168
           SN+GVCQ++    YY  G +     TFLP PYGIEVGN + +P  YEE       ++ I+
Sbjct: 122 SNNGVCQRNVLSTYYAMGSESRTISTFLPYPYGIEVGNPSEIPTDYEERWSLNVHAIDIR 181

[Close]

BLAST of Lcy03g016900 vs. NCBI nr
Match: XP_008455078.1 (PREDICTED: uncharacterized protein LOC103495342 [Cucumis melo] >KAA0031399.1 SURNod19 domain-containing protein [Cucumis melo var. makuwa] >TYK06850.1 SURNod19 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-40
Identity = 89/197 (45.18%), Postives = 119/197 (60.41%), Query Frame = 0


Query: 3   QC--WLIPFALIATTLLWLEAAEIN-----NHMIIRSKTFSSPSFPSTPGSVVEKFYYNI 62
           QC  WL+ F+ +   + +LE    N     + +II++KT+ +P F   PG VVE+F+YN 
Sbjct: 6   QCFRWLLLFSSVGIMIPYLEGVVTNKKNDDHQVIIKTKTYRTPLFTLKPGYVVERFFYNT 65

Query: 63  DFPKGHIAMKSFDVEVVDETGNQVPLLETYLHHWAL----------------------EP 122
           +FPKGHIAMKSFDVEVVDE  N +PL ETYLHHW +                      EP
Sbjct: 66  NFPKGHIAMKSFDVEVVDEEANPIPLFETYLHHWGITRYYQHKDTKDPNINTSFTQLHEP 125

Query: 123 DYIIASNDGVCQKHTFPEYYGKGPDQEQTLTFLPNPYGIEVGNVARVPLGYEESCYPEPG 169
           ++I+A N+GVCQKH  P+++G G D  +T +FLPNPYGIEVGN   VPLGYEE       
Sbjct: 126 NFIVAGNNGVCQKHALPQFFGTGADSRKTSSFLPNPYGIEVGNEKEVPLGYEEKWVLNIH 185

[Close]

BLAST of Lcy03g016900 vs. TAIR 10
Match: AT5G61820.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 121.3 bits (303), Expect = 8.9e-28
Identity = 58/149 (38.93%), Postives = 77/149 (51.68%), Query Frame = 0


Query: 30  IRSKTFSSPSFPSTPGSVVEKFYYNIDFPKGHIAMKSFDVEVVDETGNQVPLLETYLHHW 89
           I+S  F SP     PGSV   + ++IDFP+GHI +K+FD EVVDE G  VPL ETYLHHW
Sbjct: 34  IKSAVFYSPKLVMNPGSVANPYLFDIDFPRGHIGLKAFDAEVVDEAGKPVPLHETYLHHW 93

Query: 90  ALEP---------------------------------DYIIASNDGVCQKHTFPEYYGKG 146
            +EP                                 D I+  N G+C+  T   ++G G
Sbjct: 94  IVEPYYVRKGSKLPQREMFRNHGFSREDPESNLDSKSDIILVKNGGLCRSLTLRHFFGLG 153

HSP 2 Score: 56.2 bits (134), Expect = 3.5e-08
Identity = 31/63 (49.21%), Postives = 38/63 (60.32%), Query Frame = 0


Query: 131 GIEVGNVARVPLGYEESCYPEPGSVKIKNEELLTVECKYGGEQKHTGVMGLFHIMVAHKL 190
           G E GN A   +G   SCYP    VK+   E LT+E  Y     HTGVMGLF+I+VA +L
Sbjct: 361 GDEPGNEAGYIVGM-SSCYP-ADPVKVSYGETLTLESNYSNAVGHTGVMGLFYILVAQQL 420

Query: 191 PKP 194
           P+P
Sbjct: 421 PEP 421

The following BLAST results are available for this feature:

BLAST of Lcy03g016900 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy03g016900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JLU8	7.6e-43	52.35	uncharacterized protein LOC111485742 OS=Cucurbita maxima OX=3661 GN=LOC111485742...	[more]
A0A6J1JLU8	3.8e-10	50.63	uncharacterized protein LOC111485742 OS=Cucurbita maxima OX=3661 GN=LOC111485742...	[more]
A0A6J1E2R7	1.1e-09	54.41	uncharacterized protein LOC111430047 OS=Cucurbita moschata OX=3662 GN=LOC1114300...	[more]
A0A5D3C682	2.9e-10	45.45	SURNod19 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C023	2.9e-10	45.45	uncharacterized protein LOC103495342 OS=Cucumis melo OX=3656 GN=LOC103495342 PE=...	[more]

Pages

BLAST of Lcy03g016900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022988529.1	1.6e-42	52.35	uncharacterized protein LOC111485742 [Cucurbita maxima]	[more]
XP_022988529.1	7.9e-10	50.63	uncharacterized protein LOC111485742 [Cucurbita maxima]	[more]
XP_023515680.1	8.7e-09	51.47	uncharacterized protein LOC111779774 [Cucurbita pepo subsp. pepo]	[more]
XP_022921941.1	2.3e-09	54.41	uncharacterized protein LOC111430047 [Cucurbita moschata]	[more]
XP_008455078.1	1.1e-40	45.18	PREDICTED: uncharacterized protein LOC103495342 [Cucumis melo] >KAA0031399.1 SUR...	[more]

Pages

BLAST of Lcy03g016900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61820.1	8.9e-28	38.93	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011692	Stress up-regulated Nod 19	PFAM	PF07712	SURNod19	coord: 30..146 e-value: 4.1E-36 score: 124.6 coord: 147..188 e-value: 1.3E-12 score: 47.2
IPR011692	Stress up-regulated Nod 19	PANTHER	PTHR33390	STRESS UP-REGULATED NOD 19 PROTEIN	coord: 147..192
IPR011692	Stress up-regulated Nod 19	PANTHER	PTHR33390	STRESS UP-REGULATED NOD 19 PROTEIN	coord: 10..146
None	No IPR available	PANTHER	PTHR33390:SF1	STRESS UP-REGULATED NOD 19 PROTEIN	coord: 147..192
None	No IPR available	PANTHER	PTHR33390:SF1	STRESS UP-REGULATED NOD 19 PROTEIN	coord: 10..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g016900.1	Lcy03g016900.1	mRNA