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Lcy03g016600 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCTCTCTCTCTCTCTCTCTCACTTGATTTTGCGCTCCTCGTCAATTTCATGTGATTTTTCCATCTCTTTTGTTATTCGTTTTCCCACTCACCAGACTGCTCAACTTTTCTGCAACTATCGGATGCTCTGTAATGGAAGGCTGAATTCGTCTAATAATTTGCTCTGTAGCGTTATTTTCAGTCTAATAGTTTCCTGAACTCCTCTCCAAGACCACGGCCTTCTTCTTTCTATCTGTTGCTCTCTAATGGAAGGCTGCATTGACAGCAGGAAGCGAGTACGCGACGAATCCAATGATTCTTTATTCAATTTCATCGGATCCAAGATCGTCCGACTTGATTCCGCTGAATTGAGCTTCATCTCGCCGGATGTGGACGATGCACCGATTGGTTCCGTTTCATCGGATACAAAATCGATCGATTCCAAACAGATTGGAATCGTTCACGGTGATGATTCAGGCCTGGACTCGCTTCAGGCACACGCAATTCAGGAAGACCTGCTGAAGATTCTTGACGAAGCCGACGCTTCCATAGATCGCGAGTCGGCGATTCAAGATCTCGACTCGGTGATCAGAAGCTTCGAGAAGGAAATTCAGGTGCCGGTGCCAGTGCCTGTTGTTCAGCCTGAACTTGGATACCTTCTAGAAGCCTCGGACGACGAATTAGGGCTTCCGCCGGCCGGCGAGAAAGCGGAGATTGAGGCCGTTAATTTTGCCGCCCAATTTTCAGGTAGTGGCGGTATGAAAGGGTTTTTAGGGTTTGAGGATGAAGTTGTTCCGAATTACTGTTGGCTCGAAAATTTGAGCAGTGAGAACGAATCGAATCAGGGAGAAGAAGAAGTGGTGGCGTTAGGTGGATTGTTCGATCATACGGAGACGACGGCGGAGTTGCCGCCGTATCGATCGGAGACGATGTACTGTTTATAATATGATGTATTTGTATTGTAACGTGAAGAAACGAAAAACTGGAAAAGAAAAGAAAGATTGAAAAGCAATTTGAATGGCAGATTTCCTTTGAAAAAACAGGGGAAAGAAAAAAAAGTAAAGAGAACTTGTGTTGATCTACGTTTCACACTTTGATTGGCTGAGGAAAAATAAAGGTTGCCTTTATTCCTTCTCCTTTGACATTTTTTTTAAAGTGTTTTGAGAATTTCAATCAAAAGAGATTTCTGTTCTGAAATGGAG CTCTCTCTCTCTCTCTCTCTCTCACTTGATTTTGCGCTCCTCGTCAATTTCATGTGATTTTTCCATCTCTTTTGTTATTCGTTTTCCCACTCACCAGACTGCTCAACTTTTCTGCAACTATCGGATGCTCTGTAATGGAAGGCTGAATTCGTCTAATAATTTGCTCTGTAGCGTTATTTTCAGTCTAATAGTTTCCTGAACTCCTCTCCAAGACCACGGCCTTCTTCTTTCTATCTGTTGCTCTCTAATGGAAGGCTGCATTGACAGCAGGAAGCGAGTACGCGACGAATCCAATGATTCTTTATTCAATTTCATCGGATCCAAGATCGTCCGACTTGATTCCGCTGAATTGAGCTTCATCTCGCCGGATGTGGACGATGCACCGATTGGTTCCGTTTCATCGGATACAAAATCGATCGATTCCAAACAGATTGGAATCGTTCACGGTGATGATTCAGGCCTGGACTCGCTTCAGGCACACGCAATTCAGGAAGACCTGCTGAAGATTCTTGACGAAGCCGACGCTTCCATAGATCGCGAGTCGGCGATTCAAGATCTCGACTCGGTGATCAGAAGCTTCGAGAAGGAAATTCAGGTGCCGGTGCCAGTGCCTGTTGTTCAGCCTGAACTTGGATACCTTCTAGAAGCCTCGGACGACGAATTAGGGCTTCCGCCGGCCGGCGAGAAAGCGGAGATTGAGGCCGTTAATTTTGCCGCCCAATTTTCAGGTAGTGGCGGTATGAAAGGGTTTTTAGGGTTTGAGGATGAAGTTGTTCCGAATTACTGTTGGCTCGAAAATTTGAGCAGTGAGAACGAATCGAATCAGGGAGAAGAAGAAGTGGTGGCGTTAGGTGGATTGTTCGATCATACGGAGACGACGGCGGAGTTGCCGCCGTATCGATCGGAGACGATGTACTGTTTATAATATGATGTATTTGTATTGTAACGTGAAGAAACGAAAAACTGGAAAAGAAAAGAAAGATTGAAAAGCAATTTGAATGGCAGATTTCCTTTGAAAAAACAGGGGAAAGAAAAAAAAGTAAAGAGAACTTGTGTTGATCTACGTTTCACACTTTGATTGGCTGAGGAAAAATAAAGGTTGCCTTTATTCCTTCTCCTTTGACATTTTTTTTAAAGTGTTTTGAGAATTTCAATCAAAAGAGATTTCTGTTCTGAAATGGAG ATGGAAGGCTGCATTGACAGCAGGAAGCGAGTACGCGACGAATCCAATGATTCTTTATTCAATTTCATCGGATCCAAGATCGTCCGACTTGATTCCGCTGAATTGAGCTTCATCTCGCCGGATGTGGACGATGCACCGATTGGTTCCGTTTCATCGGATACAAAATCGATCGATTCCAAACAGATTGGAATCGTTCACGGTGATGATTCAGGCCTGGACTCGCTTCAGGCACACGCAATTCAGGAAGACCTGCTGAAGATTCTTGACGAAGCCGACGCTTCCATAGATCGCGAGTCGGCGATTCAAGATCTCGACTCGGTGATCAGAAGCTTCGAGAAGGAAATTCAGGTGCCGGTGCCAGTGCCTGTTGTTCAGCCTGAACTTGGATACCTTCTAGAAGCCTCGGACGACGAATTAGGGCTTCCGCCGGCCGGCGAGAAAGCGGAGATTGAGGCCGTTAATTTTGCCGCCCAATTTTCAGGTAGTGGCGGTATGAAAGGGTTTTTAGGGTTTGAGGATGAAGTTGTTCCGAATTACTGTTGGCTCGAAAATTTGAGCAGTGAGAACGAATCGAATCAGGGAGAAGAAGAAGTGGTGGCGTTAGGTGGATTGTTCGATCATACGGAGACGACGGCGGAGTTGCCGCCGTATCGATCGGAGACGATGTACTGTTTATAA MEGCIDSRKRVRDESNDSLFNFIGSKIVRLDSAELSFISPDVDDAPIGSVSSDTKSIDSKQIGIVHGDDSGLDSLQAHAIQEDLLKILDEADASIDRESAIQDLDSVIRSFEKEIQVPVPVPVVQPELGYLLEASDDELGLPPAGEKAEIEAVNFAAQFSGSGGMKGFLGFEDEVVPNYCWLENLSSENESNQGEEEVVALGGLFDHTETTAELPPYRSETMYCL Homology
BLAST of Lcy03g016600 vs. ExPASy TrEMBL
Match: A0A6J1E5H5 (uncharacterized protein LOC111429674 OS=Cucurbita moschata OX=3662 GN=LOC111429674 PE=4 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 2.4e-74 Identity = 165/228 (72.37%), Postives = 174/228 (76.32%), Query Frame = 0
BLAST of Lcy03g016600 vs. ExPASy TrEMBL
Match: A0A5D3DXI3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00410 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 8.3e-59 Identity = 146/232 (62.93%), Postives = 166/232 (71.55%), Query Frame = 0
BLAST of Lcy03g016600 vs. ExPASy TrEMBL
Match: A0A5A7UZW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34725G00010 PE=4 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 2.4e-58 Identity = 145/232 (62.50%), Postives = 165/232 (71.12%), Query Frame = 0
BLAST of Lcy03g016600 vs. ExPASy TrEMBL
Match: A0A1S3BWV1 (uncharacterized protein LOC103494333 OS=Cucumis melo OX=3656 GN=LOC103494333 PE=4 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 2.4e-58 Identity = 145/232 (62.50%), Postives = 165/232 (71.12%), Query Frame = 0
BLAST of Lcy03g016600 vs. ExPASy TrEMBL
Match: A0A0A0LS21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022530 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 2.0e-57 Identity = 145/233 (62.23%), Postives = 162/233 (69.53%), Query Frame = 0
BLAST of Lcy03g016600 vs. NCBI nr
Match: KAG6587646.1 (hypothetical protein SDJN03_16211, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 327.4 bits (838), Expect = 9.7e-86 Identity = 173/226 (76.55%), Postives = 188/226 (83.19%), Query Frame = 0
BLAST of Lcy03g016600 vs. NCBI nr
Match: KAG7021606.1 (hypothetical protein SDJN02_15332, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 325.9 bits (834), Expect = 2.8e-85 Identity = 172/226 (76.11%), Postives = 188/226 (83.19%), Query Frame = 0
BLAST of Lcy03g016600 vs. NCBI nr
Match: XP_023531746.1 (uncharacterized protein LOC111793909 [Cucurbita pepo subsp. pepo] >XP_023531747.1 uncharacterized protein LOC111793909 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 321.6 bits (823), Expect = 5.3e-84 Identity = 169/226 (74.78%), Postives = 186/226 (82.30%), Query Frame = 0
BLAST of Lcy03g016600 vs. NCBI nr
Match: KAG6589552.1 (hypothetical protein SDJN03_14975, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 301.6 bits (771), Expect = 5.7e-78 Identity = 171/228 (75.00%), Postives = 180/228 (78.95%), Query Frame = 0
BLAST of Lcy03g016600 vs. NCBI nr
Match: XP_023516749.1 (uncharacterized protein LOC111780554 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 300.8 bits (769), Expect = 9.7e-78 Identity = 171/228 (75.00%), Postives = 180/228 (78.95%), Query Frame = 0
BLAST of Lcy03g016600 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 81.6 bits (200), Expect = 8.6e-16 Identity = 66/190 (34.74%), Postives = 97/190 (51.05%), Query Frame = 0
BLAST of Lcy03g016600 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 77.0 bits (188), Expect = 2.1e-14 Identity = 62/173 (35.84%), Postives = 86/173 (49.71%), Query Frame = 0
BLAST of Lcy03g016600 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 74.7 bits (182), Expect = 1.1e-13 Identity = 56/148 (37.84%), Postives = 76/148 (51.35%), Query Frame = 0
BLAST of Lcy03g016600 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 56.6 bits (135), Expect = 3.0e-08 Identity = 49/136 (36.03%), Postives = 67/136 (49.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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