Lcy03g015970 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g015970
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reverse transcriptase domain-containing protein
Location	Chr03: 49880135 .. 49885713 (-)
RNA-Seq Expression	Lcy03g015970
Synteny	Lcy03g015970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATGGAATATGTAGGGAGATCCTCACATACCGGTATACAACCAGATATTGTTAATGTCTTTGTTCTCTAGTAGAGAAAAATCTCCACATACCAGTATGCAACCAGATATTGTTAATGTTTTTGTTCTCTAGTGTCACTACTAGTGATTAGATGGGCTAAAGTCCAGTTGTCTTAATGAAATTGTTGACTGTTGTTGGTCAAATGTCCAGTTGTCTTATTTTCATCTGGGGAGCTGATAAAAAGGGCTTATTTTCAGTAAAAAGTGCTTACCACCTCGCGGTTAACAAAGAGACCCAGTTTTCAGCCTCGGTTTCTAACTCATCCTCATCCACCAGCTTGTGGAAATCGATTTGGCAGCTTAAGAGTAGGCCGAAAGTGAAAATTCACTTGTGGAAAGCTATGAGCAATGCGCTTCCTACTCTTGAGAACATAAAGAAGAAAGGAATAGACACTAACACTTGCTGTTTTCTGTGCAGGTGCAAGGAAGAAAATGTGGAGCATATTTTCTGGAATTGTAAAGTGGTTAGGAAAATTTGGGGGAATTTTTCGTCCGCGCTTAGTGAGGTTTTTGGCTTTTGCAGAGATTGGTGGAGTTTTGCAGATTTCTGGGACTTTCTTTCAAAGACTCTTAATGCTCAGGAAGCAGGGAAAGCAAGTCATATTATTTGGGCTATTTGGCATAAACGGAATCAGATGAAGCAATCAAACAGCAAACTCGACTCAAGCAAAATTATAGCTGATATCGAAGCTATAGCAGGAAGAATGCAGTGTGAGGTTTCTTACCAGTCTGATTTCGCGGAGACCCATCCGAGTCACGCGTGCTGGACCCCGCCGAAGGAGAAGCAATGGAAGATCAACGTCGACGCAGCCTGGTTCGACGAAGCCGGGATCGGAGGTGTGGGGTGGATTATTCGCGACTCCGACGGTTCTCTGATTGGAGCTGGCGGGAAGAAATCGTCAAAGAAGATCGACATTAATATGTTGGAATCCCTCGCTATTATCGAAGGGCTTCGCCAAATTTCAACAAAATTTCAAGCGTTCCCGGAGCTGCGTGATCACGAGATCGTGGTCTGTTGGGAGTGCGCCCAAAGTCCCACATCGGCTGGATAAGGGGATGATCATGGGTTTACAAGGGAGGACAAGTTCTCCATTGGTATGAGGCCTTTTGGGGTGAACCAAAAAGCAAAGCCATGAGGGCTTATGCCCAAAGTGGACAATATCATACCATTGTGGAGATATGTGTGTGTCCGGTAGTCCCTTACAAGTGGTATCAGAGCCATGCCCCGGGAGTAGCCGTAAGATACCCCAATTTACTGCTTCTAGCCAAAATTCTTTTGGAACTCTCCCATTTGCAATCATACTTCGAAGTCCCACTTTTTCGGTGAAAAACATGACTCCTCAAGAAGCTTGGGATGGGCGTAAACCATCAGTTGATCACTTTAAAGTGTTCGGGTGCATTGCATATGCACACGTTCCTGACGAGAAGAGAAGGAAGCTAGATGACAAAGGTCAAAAATGTGTCTTTCTTGGCATTAGTGAGCAATCAAAGGCTTACAAACTGTTCAATCCAATCACAGGTAAAATTGTAATTAGCCGAGATGTTATATTTGATGAACTAAACACTTGGAATTGGACAGAAGATACTCTAGAGCAACAAACAGTACCTGTGAACCTTGAGGATAGTGATGAATCTTTGACACCTCAACTTGAAGAGCCAGTACAACAATCAGTTGAGCTTGAGGCTACTGAGTCTCAAACAGGAGGTGCAAGTTCTTCAAGATCACAACGAGTTAGAAGGAGACCAGCATGGATGGAAGATTATGAGGTTAGTGGTGATCTTTCTGATGAGACATTTGTCCATTATGCTTTATTATCAGAATGTGATCCATTAACTTTTGAAGAAGCTGTCAAAGATATAAAATGGAAGCAGGCCATGGATGAAGAGATTAAGTCGATTGAGAAAAACAACACTTGGGAGCTATTAGAACTTCCTAGAGGGCAAAAACCCATTGGTGTTAAATGGGTTTACAAAACGAAGCTGAATAAAGATGGCCAAGTAGACAAATACAAGGCTCGTCTTGTCGCAAAGGGGTACAAGCAACAAATTGGCATTGACTACAATGAAGTTTTCGCTCCGGTTGCAAGACATGATACGATTCGAATGGTGGTTGCATTGGCAGCACAAAACAATTGGAAAATTCTTCAAATGGACGTGAAATCAGCCTTTTTGCATGGCAACTTGAATGAAGAAGTTTACATAGATCAACCCCCTGGATATGTTCAACAGAGTAATGCAAGAAAGGTATATCGCTTGAAGAAGGCTTTGTATGGATTGAAGCAAGCTCCTAGGGCTTGGTACAGTCGAATTGAGGCCTTTTGGGGTGAACCAAAAGCAAAGCCATGAGGGTTATGCCCAAAGTGGACAATATCATACCATTGTGGAGATATGTGTGTGTCCGGTAGTCCCTTACAAGTGGTATCAGAGCCATGCCCCGGGAGTAGCCGTGTCGGGAGGAATCCTCGGATGCCGAACAAAGAAGTTGTGAACCTCGATAGTCATGGTGGAGATCCGTGGTTGAGCTCTGGGCAGGCGGGTATACTCTGGAGAAGAGGAGTCGTCCTGGATAAGAGCAAGAACTCTCGGTAAAGCGTTGAAGCCTAGAGAGTTGGACGGATAGATGACTAGTTGAGGGGAGGCTCGGTGGTACTTTGTTCGAGGGGAGGATTGTTGGGAGTGCGCCCAAAGTCCCACATCGGCTACATGAGGGGAAGATCATGGGTTTACAAGGGAGGACAAGTTCTCCATTGGTATGAGGCCTTTTGGGGTGGATCCAAAAGCAAAGCCATGAGGGCTTATGCCCAAAGTGGACAATATCATACCATTGTGGAGATATGTGTGTGTCCGGTAGTCCCTTACAAGACACGTTTTTTTTTTTTTTAGAATATGTGGGATGGGGGATTCGAACCACTGACCTTGTGGTCATCAGTACAACTTTGTGCCAGTTGAGAACCTCTAAAAACACGTTGGAGGGTTACCAACTGTAACGACCCACCTTCTCATGACAAATTCCTAGGGCCATTACCATATACATTTCATTTTTCTTTCTAAGATCAACGATGAAATGACATTCAAAGTAAAACATGGTTAGAAAATACGTGAAACTTTTCAGCCTGGGATCCCAGTTAAAAAAAACAAGAAGAAATTTTAGCCATTCCAGCAAAAGACTTTAAGCGGAATAAATCTTAAAACATCACATGACAAGTTCCAAAAGAAGGAATTTGGAAGCATAAAATGCGGAAGTCTATCCTAAGGGAAATCCATGGCTTGTCAGCAGCAGTCCGCCACGCGCCCTGTATGTCATTGCTTGTACCTGAAAGGAAACATTTGAAAAGAATGAGTATTAAAAATACTCAGTAAGTAACACTACTATTGGGAGGAGATTTACAAGCATTACATGGATATTTGGAGGTTAGTTGCTATTACAGGGCCTAATAGTCATTTCATTTCATTTCATCTCATTTCATTTATCATGTCGTATGGGTCACGTGGACAATTAACCAACATGTCGCATGCTTACCAACTCACTGAAGGTGCACAAGTGGGAATCGTGGGAGATCTCTACTCCTACTGATAGTAGAAGGCACCCAGTCAGTGGAGCCAAGTCTCACCCATCAAGGCACCTATGTGTGCATAGCACTCTAACTACCAACTCACTGGTGGGGCGTCCATGAGTTTTAGTCGAAACTTTACTCCCACAGATAGTAGATGGCACCTAGTCTGCGAAGCCGAGTCCCGCCCATTTAGCTCCTCATCTCAGTCTATAAACATTTCAGTCCTAGGTGTTTAATTGCCACGGTCCCTACTGGAATAAGTAACATATCCTCATTTCGTACTAGGGCCCCTGTTAACAAAGTCTGATTTAATTTGCAACCTAGCCATCAAGTTTCTTTCCCATAAAGATCTCTGAAGGGCTAATTTCACATGTACTAACTACCTCGCCTTTCATCTCGTTCAAGCACATATATCATAACGTCCAAACACTAAATAGAAAAGACATATGTATAGTCTAAACAGCCACGACCCAATTCAGCATACCATAATCCAAGTGTCATTACTAAACTTAGCCTCGTTATTAACTGTAATGCTACCGAAAATTCGACAGCATAACGACATACGTATAACTGACCCAAAATTTTCTTATCACCTGCGAACAAGAGAATACACTTCTATATTCAAACTGCCCAACTACAAATTTCCACAAACACTTCGGATTAATAGAATAGACCCCGAACTTCCAAAACAAAGCGAGTTAGGTCTCGCATCCACGACTCAACCATATAAAACATCCTATCGTCCCCAACATAGAGCATCCAGAGCATTCAGAGCATTTAGAGCATTCAGAGCATATAAAACTTATCCAACCAGAGCATTCTAAACATAAAGCAGACAAAGTGTTCAACACAACTAGAACATTTCTCATAATCTAAGCGTTTGATACTTTTGAACCAACACTATATTCAGAGTATACCATTCAGACAAATGCACATAATCGGGATGTTCAATAACACCAGAACACACATAATCCAACATCTCATAACTCAAACCATACATGATCAATGTCTCCCGCTCTGTGTTATTCAAAGCATGTAACAAATCATAATAAATAGCTTAGCCTAGCCAAGGCTTTCCAAGTAGTAAGGTTACTTACATTAGTGCAAGAAGATACTTGATTTATGCACAAACCAACTAATTCAATGCGACGTCGCTCATGACACAAGCAACTCCATCTAAAATCACAAGAGTGGCCTTAGAATTAGGGACATCTAATTCTCATAATTATTTTCATGAACAACTTGATTTAAGGAGGCGAAAACTTACACAAACCAAGTCGAAGCTTGCTGTCCAACTTCTAAAATCGCTCCAACTCGACGATTGGACCTTCAAACGTTGTGGGTACCTTGAAATCAATGGCTAATATTAATGGGTACTTCTCTAAAACACTTTAATCAACCAAAGATTGATTTAATTGCTCCTACCCAAAGCTGGAATTGTACAAACATGCTCAAACTCAAAGACCCATTGCTCGAATCGCCGAAATTGAATGGGTACGCTTGCTGAACGGGAGAAAAAGTGAATGGGTAATCGTTTAAAAGCAAGAAATAACCCACATAAGCCTCAAACCAACTTACCCACTGCGAGAACTCACCTAAAACACTCGAAAAATGTAGAAAACAGCCCCTCCCTTACATGGTCGAGTCGGATGCAGCGGAAATCGTGAGTGTGATCAATCGGGATTTGATCGACATTTCAGAGGTATCGGGTTTCATCGATGAGATCTGGGATTTGGCTTTGCAAGCTCAGGTGGTGTTGTTCAGATTTAGTCCTAGATCATTGAATTTTTTGGCGCACTCCCTAGCGCGTGCTGTAGCCTGGAATGGAGATTTCCATTTTTTCTGTTTTGATCCTTCTCCTTGCTCGAGAATGGATAGTGTTGGTAGGGTGGAGCTCTTTTGGCCCCCCTGGTTTTCCTCAATTTTGGAGGATCTGGTTGTTGTACCTAACTGTTTGCCTTCTTAA

mRNA sequence

TAATGGAATATGTAGGGAGATCCTCACATACCGGTATACAACCAGATATTGTTAATGTCTTTGTTCTCTAGTAGAGAAAAATCTCCACATACCAGTATGCAACCAGATATTGTTAATGTTTTTGTTCTCTAGTGTCACTACTAGTGATTAGATGGGCTAAAGTCCAGTTGTCTTAATGAAATTGTTGACTGTTGTTGGTCAAATGTCCAGTTGTCTTATTTTCATCTGGGGAGCTGATAAAAAGGGCTTATTTTCAGTAAAAAGTGCTTACCACCTCGCGGTTAACAAAGAGACCCAGTTTTCAGCCTCGGTTTCTAACTCATCCTCATCCACCAGCTTGTGGAAATCGATTTGGCAGCTTAAGAGTAGGCCGAAAGTGAAAATTCACTTGTGGAAAGCTATGAGCAATGCGCTTCCTACTCTTGAGAACATAAAGAAGAAAGGAATAGACACTAACACTTGCTGTTTTCTGTGCAGGTGCAAGGAAGAAAATGTGGAGCATATTTTCTGGAATTGTAAAGTGGTTAGGAAAATTTGGGGGAATTTTTCGTCCGCGCTTAGTGAGGTTTTTGGCTTTTGCAGAGATTGGTGGAGTTTTGCAGATTTCTGGGACTTTCTTTCAAAGACTCTTAATGCTCAGGAAGCAGGGAAAGCAAGTCATATTATTTGGGCTATTTGGCATAAACGGAATCAGATGAAGCAATCAAACAGCAAACTCGACTCAAGCAAAATTATAGCTGATATCGAAGCTATAGCAGGAAGAATGCAGTGTGAGGTTTCTTACCAGTCTGATTTCGCGGAGACCCATCCGAGTCACGCGTGCTGGACCCCGCCGAAGGAGAAGCAATGGAAGATCAACGTCGACGCAGCCTGGTTCGACGAAGCCGGGATCGGAGGTGTGGGGTGGATTATTCGCGACTCCGACGGTTCTCTGATTGGAGCTGGCGGGAAGAAATCGTCAAAGAAGATCGACATTAATATGTTGGAATCCCTCGCTATTATCGAAGGGCTTCGCCAAATTTCAACAAAATTTCAAGCGTTCCCGGAGCTGCCGGAAATCGTGAGTGTGATCAATCGGGATTTGATCGACATTTCAGAGGTATCGGGTTTCATCGATGAGATCTGGGATTTGGCTTTGCAAGCTCAGGTGGTGTTGTTCAGATTTAGTCCTAGATCATTGAATTTTTTGGCGCACTCCCTAGCGCGTGCTGTAGCCTGGAATGGAGATTTCCATTTTTTCTGTTTTGATCCTTCTCCTTGCTCGAGAATGGATAGTGTTGGTAGGGTGGAGCTCTTTTGGCCCCCCTGGTTTTCCTCAATTTTGGAGGATCTGGTTGTTGTACCTAACTGTTTGCCTTCTTAA

Coding sequence (CDS)

ATGAAATTGTTGACTGTTGTTGGTCAAATGTCCAGTTGTCTTATTTTCATCTGGGGAGCTGATAAAAAGGGCTTATTTTCAGTAAAAAGTGCTTACCACCTCGCGGTTAACAAAGAGACCCAGTTTTCAGCCTCGGTTTCTAACTCATCCTCATCCACCAGCTTGTGGAAATCGATTTGGCAGCTTAAGAGTAGGCCGAAAGTGAAAATTCACTTGTGGAAAGCTATGAGCAATGCGCTTCCTACTCTTGAGAACATAAAGAAGAAAGGAATAGACACTAACACTTGCTGTTTTCTGTGCAGGTGCAAGGAAGAAAATGTGGAGCATATTTTCTGGAATTGTAAAGTGGTTAGGAAAATTTGGGGGAATTTTTCGTCCGCGCTTAGTGAGGTTTTTGGCTTTTGCAGAGATTGGTGGAGTTTTGCAGATTTCTGGGACTTTCTTTCAAAGACTCTTAATGCTCAGGAAGCAGGGAAAGCAAGTCATATTATTTGGGCTATTTGGCATAAACGGAATCAGATGAAGCAATCAAACAGCAAACTCGACTCAAGCAAAATTATAGCTGATATCGAAGCTATAGCAGGAAGAATGCAGTGTGAGGTTTCTTACCAGTCTGATTTCGCGGAGACCCATCCGAGTCACGCGTGCTGGACCCCGCCGAAGGAGAAGCAATGGAAGATCAACGTCGACGCAGCCTGGTTCGACGAAGCCGGGATCGGAGGTGTGGGGTGGATTATTCGCGACTCCGACGGTTCTCTGATTGGAGCTGGCGGGAAGAAATCGTCAAAGAAGATCGACATTAATATGTTGGAATCCCTCGCTATTATCGAAGGGCTTCGCCAAATTTCAACAAAATTTCAAGCGTTCCCGGAGCTGCCGGAAATCGTGAGTGTGATCAATCGGGATTTGATCGACATTTCAGAGGTATCGGGTTTCATCGATGAGATCTGGGATTTGGCTTTGCAAGCTCAGGTGGTGTTGTTCAGATTTAGTCCTAGATCATTGAATTTTTTGGCGCACTCCCTAGCGCGTGCTGTAGCCTGGAATGGAGATTTCCATTTTTTCTGTTTTGATCCTTCTCCTTGCTCGAGAATGGATAGTGTTGGTAGGGTGGAGCTCTTTTGGCCCCCCTGGTTTTCCTCAATTTTGGAGGATCTGGTTGTTGTACCTAACTGTTTGCCTTCTTAA

Protein sequence

MKLLTVVGQMSSCLIFIWGADKKGLFSVKSAYHLAVNKETQFSASVSNSSSSTSLWKSIWQLKSRPKVKIHLWKAMSNALPTLENIKKKGIDTNTCCFLCRCKEENVEHIFWNCKVVRKIWGNFSSALSEVFGFCRDWWSFADFWDFLSKTLNAQEAGKASHIIWAIWHKRNQMKQSNSKLDSSKIIADIEAIAGRMQCEVSYQSDFAETHPSHACWTPPKEKQWKINVDAAWFDEAGIGGVGWIIRDSDGSLIGAGGKKSSKKIDINMLESLAIIEGLRQISTKFQAFPELPEIVSVINRDLIDISEVSGFIDEIWDLALQAQVVLFRFSPRSLNFLAHSLARAVAWNGDFHFFCFDPSPCSRMDSVGRVELFWPPWFSSILEDLVVVPNCLPS

Homology

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BLAST of Lcy03g015970 vs. ExPASy TrEMBL
Match: A0A2N9H1N4 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33433 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.3e-32
Identity = 99/353 (28.05%), Postives = 166/353 (47.03%), Query Frame = 0


Query: 11   SSCLIFIWGADKKGLFSVKSAYHLAVNKETQFSASVSNSSSSTSLWKSIWQLKSRPKVKI 70
            + CL  +WG  K G++SVKS YHL +N   +  +  S+ S  + LWKS+W L   PK + 
Sbjct: 1209 TDCL--VWGETKNGVYSVKSGYHLLLNDSCREESGPSDPSQMSQLWKSVWSLNVPPKTRH 1268

Query: 71   HLWKAMSNALPTLENIKKKGIDTNTCCFLCRCKEENVEHIFWNCKVVRKIWGNFS--SAL 130
             LW+A  N+LPT  N+  + I  +  C +C  + E+  H  W CK V+ +W + S    L
Sbjct: 1269 FLWRACHNSLPTRSNLHHRHILDDPRCTICSKQLESTIHALWQCKKVQSVWKSISWGQQL 1328

Query: 131  SEVFGFCRDWWSFADFWDFLSK---TLNAQEAGKASHIIWAIWHKRNQMKQSNSKLDSSK 190
            +E         ++ DF D L K    L+  E    S I W+IW++RN+++   S  +  +
Sbjct: 1329 AES--------TYTDFIDLLHKCFSLLSTSELQLFSMICWSIWYRRNRLRLQQSVDNDLQ 1388

Query: 191  IIADIEAIAGRMQCEVSYQSDFAETHPSHAC--WTPPKEKQWKINVDAAWFDEAGIGGVG 250
            ++          Q     +    +   S A   W PP + ++K+N D A F ++   G+G
Sbjct: 1389 LVQRARDSMSEFQEAQDREQQLPQQPSSSATVKWNPPAQGRYKVNYDGAIFSDSNAAGIG 1448

Query: 251  WIIRDSDGSLIGAGGKKSSKKIDINMLESLA---IIEGLRQIS-TKFQAFPELPEIVSVI 310
             IIR+  G ++G+  ++      +  +E+ A    I+  R +  TK     +   +V  +
Sbjct: 1449 VIIRNHQGEVMGSLSQRFPFPHSVEAVEASAARSAIQFARDLGFTKIDLEGDSKTVVEAL 1508

Query: 311  NRDLIDISEVSGFIDEIWDLALQAQVVLFRFSPRSLNFLAHSLARAVAWNGDF 353
                   +  +  I++   +A   Q VLF  + R  N +AH LA+    N  F
Sbjct: 1509 ILREPCTTMYNHIIEDTKQIAQSLQSVLFLHTNREGNVMAHLLAKRARQNKPF 1551

[Close]

BLAST of Lcy03g015970 vs. ExPASy TrEMBL
Match: A0A2N9J109 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58001 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 6.8e-32
Identity = 103/336 (30.65%), Postives = 164/336 (48.81%), Query Frame = 0


Query: 15   IFIWGADKKGLFSVKSAYHLAVNKETQFSASVSNSSSSTSLWKSIWQLKSRPKVKIHLWK 74
            + IW   + G +SV+SAYHL + + T   +S SN   S +LWK +W L++ PKVK  LW+
Sbjct: 1267 VIIWPHTRDGGYSVRSAYHLLLQEATTSRSSSSNYDVSKALWKKVWSLRTPPKVKNFLWR 1326

Query: 75   AMSNALPTLENIKKKGIDTNTCCFLCRCKEENVEHIFWNCKVVRKIWG--NFSSALSEVF 134
            A S +LPT  N+ K+ +  N  C  C  + E+  H  W C V   +W   ++S  L    
Sbjct: 1327 ACSESLPTKLNLWKRKVLRNAWCERCEEEVEDAGHAIWQCVVNSPVWSQESWSQKLRGNQ 1386

Query: 135  GFCRDWWSFADFWDFLSKTLNAQEAGKASHIIWAIWHKRNQMKQSNSKLDSSKIIADIEA 194
            G      SF D    +    + + AG+ + I W +WH+RN+ + S + L S+   +   A
Sbjct: 1387 G------SFGDLASRILMDESDEIAGRFATIAWFLWHERNKFRLSPTSLPSANTHSQAIA 1446

Query: 195  IAGRMQCEVSYQSDFAETHPSHACWTPPKEKQWKINVDAAWFDEAGIGGVGWIIRDSDGS 254
            +      E +         P+   W+PP    +K+N D A F ++   G+G IIRDS+G 
Sbjct: 1447 LWQEFLAENTASETPRPPRPA-TTWSPPPLGCYKVNFDGAVFADSHEAGLGVIIRDSNGL 1506

Query: 255  LIGAGGKKSSKKIDINMLESLA---IIEGLRQIST-KFQAFPELPEIVSVINRDLIDISE 314
            +I A  +K      + ++E+LA    ++   ++ T K +   +    +  INR     + 
Sbjct: 1507 IIAALAQKIPYPGSVVLVEALAARRAVDFALEVGTWKVEIEGDSKLTIRDINRQAPIFTP 1566

Query: 315  VSGFIDEIWDLALQAQVVLFRFSPRSLNFLAHSLAR 345
                ID+I   A + Q  LF  + R  N  AH+LAR
Sbjct: 1567 YGHIIDDIRVAAAKLQWFLFNHTRREGNKAAHALAR 1595

[Close]

BLAST of Lcy03g015970 vs. ExPASy TrEMBL
Match: A0A2N9I921 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48455 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 5.8e-31
Identity = 103/346 (29.77%), Postives = 167/346 (48.27%), Query Frame = 0


Query: 15   IFIWGADKKGLFSVKSAYHLAVNKETQFSASVSNSSSSTSLWKSIWQLKSRPKVKIHLWK 74
            + IW   + G++SV+SAYHL   +E++   S SN+ +  +LW  +W L   PKVK  LW+
Sbjct: 1394 VIIWPHTRDGVYSVRSAYHLLRQEESRSRPSSSNAEAQKALWTKVWSLCLPPKVKSFLWR 1453

Query: 75   AMSNALPTLENIKKKGIDTNTCCFLCRCKEENVEHIFWNCKVVRKIWGNFSSALSEVFGF 134
            A   ALPT  N+ K+ +  N  C  C    E+  H  W+C V  ++W             
Sbjct: 1454 ACLEALPTKLNLWKRKVLRNAWCERCEDDVEDTSHAIWHCGVNSQVW------------- 1513

Query: 135  CRDWWSF------ADFWDFLSKTL---NAQEAGKASHIIWAIWHKRNQMKQSNSKLDSSK 194
             R+ WS         F D  SK L     + +G+ + I W++WH+RN+ + +      S 
Sbjct: 1514 AREDWSHRFQGYRGTFGDLASKILLNEPVEVSGRFATIAWSLWHERNKFRLT----PYSF 1573

Query: 195  IIADIEAIAGRMQCEVSYQSDFAETHPSHA---CWTPPKEKQWKINVDAAWFDEAGIGGV 254
            +  D  + A  +  E   ++  AE H + +    WTPP    +K N D A F ++   G+
Sbjct: 1574 LPEDTHSRAIDLWLEFLAENTPAEAHKTRSPELPWTPPPLGLYKANFDGAVFQDSHEAGL 1633

Query: 255  GWIIRDSDGSLIGAGGKKSSKKIDINMLESLAIIEGLR---QIST-KFQAFPELPEIVSV 314
            G IIRDS G +I +  +K      + M+E+LA    +    ++ T + +   +  +I+  
Sbjct: 1634 GVIIRDSSGLVIASLAQKIPFPGSVAMVEALAARRAVTFAIEVGTWQIEFEGDSEQIIKA 1693

Query: 315  INRDLIDISEVSGFIDEIWDLALQAQVVLFRFSPRSLNFLAHSLAR 345
            IN+++   +     ID+I   A Q Q   F+ + R  N  AH+LAR
Sbjct: 1694 INQEVSSFTPYGHIIDDIRCTAEQLQWFRFKHTRREGNKAAHALAR 1722

[Close]

BLAST of Lcy03g015970 vs. ExPASy TrEMBL
Match: A0A6J5WPU6 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS20372 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.9e-29
Identity = 102/356 (28.65%), Postives = 167/356 (46.91%), Query Frame = 0


Query: 17  IWGADKKGLFSVKSAYHLAVNKE------TQFSASVSNSSSSTSLWKSIWQLKSRPKVKI 76
           IW     G ++V+S Y LA++ +       + +   S+SSS +S+WKS+W + + PK+K 
Sbjct: 585 IWHFSMHGRYTVRSGYELALHLQRNGELGRKGAGEASSSSSQSSVWKSVWHVDAPPKLKA 644

Query: 77  HLWKAMSNALPTLENIKKKGIDTNTCCFLCRCKEENVEHIFWNCKVVRKIWGNFSSALS- 136
            +W+  SN L    N++++ +     C  C  ++E   HIF+ C   R  W  F+S L  
Sbjct: 645 FIWRGCSNILAVRHNLRRRRVPYTGECGFCGFQDETQAHIFFECDFARAFW--FASPLQL 704

Query: 137 EVFGFCRDWWSFADFWDFLSKTLNAQE-AGKASHI----IWAIWHKRNQMKQSNSKLDSS 196
           +V     +   F   W  +  TLN+ E A +A       +W IW  RN       + D +
Sbjct: 705 DVSKLAGE--DFISTWQHMMTTLNSSEHAAEAIQWFVFGLWRIWKARNLAVFDGVQADPT 764

Query: 197 K-IIADIEAIAGRMQCEVSYQSDFAE--THPSHACWTPPKEKQWKINVDAAWFDEAGIGG 256
           + ++  ++ ++     +   Q    +  + P+   W  P     K+N DAAW  +   GG
Sbjct: 765 EAVLLLLKQVSEFRTAKQDLQPQPLQPVSSPAPLSWCKPPPGLLKVNCDAAWSAQRMGGG 824

Query: 257 VGWIIRDSDGSLIGAGGKKSSKKIDINMLESLAIIEGLRQIS----TKFQAFPELPEIVS 316
           VGW+IRDS G L+ AGG+         M+E LAI   L + +    T      +  + + 
Sbjct: 825 VGWVIRDSFGLLLCAGGQGDLHGSSAIMMELLAIRHALSECANFHLTDIIVESDSQKGIL 884

Query: 317 VINRDLIDISEVSGFIDEIWDLALQAQVVLFRFSPRSLNFLAHSLARAVAWNGDFH 354
           ++N      S++ G + +I  L      V F F+PRS N  AHS+A  V+  G  H
Sbjct: 885 MLNGRATVDSDLEGIVFDIRQLVASLSRVSFVFAPRSCNQAAHSVAGFVSKQGGNH 936

[Close]

BLAST of Lcy03g015970 vs. ExPASy TrEMBL
Match: A0A2N9F2A9 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8891 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.4e-29
Identity = 91/349 (26.07%), Postives = 156/349 (44.70%), Query Frame = 0


Query: 10  MSSCLIFIWGADKKGLFSVKSAYHLAVNKETQFSASVSNSSSSTSLWKSIWQLKSRPKVK 69
           ++ CL  +WGA K G++SV+S Y   +N+  +     S+ +  + LWKS+W L   PK++
Sbjct: 382 LTDCL--VWGATKNGVYSVRSGYKFLLNESHREDPGSSDPTRMSQLWKSVWSLNVPPKIR 441

Query: 70  IHLWKAMSNALPTLENIKKKGIDTNTCCFLCRCKEENVEHIFWNCKVVRKIWGNFS--SA 129
             LW+A  N+LPT  N+  + I  +  C  C  + E+  H  W CK+V+ +W + S  S 
Sbjct: 442 HFLWRACHNSLPTKSNLHHRHILDDPSCTNCSYQSESTIHALWQCKMVQPVWQSISWGSK 501

Query: 130 LSEVFGFCRDWWSFADFWDFLSKTLNAQEAGKASHIIWAIWHKRNQMKQSNSKLDSSKII 189
           L        ++  F D        L+  E    S I W+IW++RN+++      ++ ++ 
Sbjct: 502 LG-----ASNFMGFIDLLHQCFSILSPSEVQLFSMISWSIWYRRNRLRLQQPADNNFQVP 561

Query: 190 ADIEAIAGRMQCEVSYQSDFAETHPSHACWTPPKEKQWKINVDAAWFDEAGIGGVGWIIR 249
             +E +                       W PP +  +K+N D A F +    G+G I+R
Sbjct: 562 GSVELVK----------------------WNPPAQGSYKVNYDGAVFSDFNAAGIGVIVR 621

Query: 250 DSDGSLIGAGGKKSSKKIDINMLESLAIIEGLRQIS----TKFQAFPELPEIVSVINRDL 309
           +  G ++G+   +      +  LE+ A    ++       TKF    +   +V  +    
Sbjct: 622 NHQGEVMGSLSHRIPFPHSVEALEASAARSAIQFAKDLGFTKFVLEGDSKTVVDALLLRE 681

Query: 310 IDISEVSGFIDEIWDLALQAQVVLFRFSPRSLNFLAHSLARAVAWNGDF 353
              +     ID+I  +A   Q VLF  + R  N +AH LA+    N  F
Sbjct: 682 PCTTIYGHIIDDIKQIAQSLQSVLFLHTKREGNVMAHLLAKRARQNKPF 701

[Close]

BLAST of Lcy03g015970 vs. NCBI nr
Match: XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina])

HSP 1 Score: 155.2 bits (391), Expect = 1.2e-33
Identity = 108/337 (32.05%), Postives = 161/337 (47.77%), Query Frame = 0


Query: 17   IWGADKKGLFSVKSAYHLAVNKETQFSASVSNSSSSTSLWKSIWQLKSRPKVKIHLWKAM 76
            IW  DKKG +SVKS Y +A+    +F    S S+   +LW+ IW+L    KVKI LW+A 
Sbjct: 801  IWHYDKKGYYSVKSGYQVAM--RIKFPEDPSCSNHDQNLWRFIWKLAIPEKVKIFLWRAA 860

Query: 77   SNALPTLENIKKKGIDTNTCCFLCRCKEENVEHIFWNCKVVRKIWGNFSSALSEVFGFCR 136
             + LPT EN+ KK +     C  C C  E V H    C   RKIW  +S+   E+ G  R
Sbjct: 861  HDLLPTAENLWKKKVLQEPMCQSCHCHVETVSHALVECNRARKIW-RYSNLAEELRGVYR 920

Query: 137  -DWWSFADFWDFLSKTLNAQEAGKASHIIWAIWHKRNQMKQSNSKLDSSKIIADIEAIAG 196
             D      FW    +     E  + + ++WAIW  RN+      K +  +++A+ EAI  
Sbjct: 921  CDIVWMLQFW---PRQHAKVEGAEVAALLWAIWKARNKWLFEGKKENPLRVVANAEAIVE 980

Query: 197  RM----QCEVSYQSDFAETHPSHACWTPPKEKQWKINVDAAWFDEAGIGGVGWIIRDSDG 256
                  Q E+ Y++           W+PP     K+NVDAA   E  + G+G ++RDSDG
Sbjct: 981  SFKKIRQPEMVYKTKGNAERQKQ--WSPPPNGWQKVNVDAAVDVENQMAGLGVVVRDSDG 1040

Query: 257  SLIGAGGKKSSKKIDINMLESLAIIEGLRQISTKFQAF----PELPEIVSVINRDLIDIS 316
            +   A  K       + M E+ A+  GL+        F     +  E++ +IN+    ++
Sbjct: 1041 NCRAAAIKSLRLPGSVAMAEATAMEWGLKVAEKAHITFGIFESDSLEVIDLINKKSSSLT 1100

Query: 317  EVSGFIDEIWDLALQAQVVLFRFSPRSLNFLAHSLAR 345
            E+   I +I +     Q    + SPR  N+ AHSLA+
Sbjct: 1101 EIGWLISDIQENLQNFQNFKAQHSPRDCNYAAHSLAK 1129

[Close]

BLAST of Lcy03g015970 vs. NCBI nr
Match: XP_030946032.1 (uncharacterized protein LOC115970553 [Quercus lobata])

HSP 1 Score: 143.7 bits (361), Expect = 3.5e-30
Identity = 99/335 (29.55%), Postives = 161/335 (48.06%), Query Frame = 0


Query: 17   IWGADKKGLFSVKSAYHLAVNKETQFSASVSNSSSSTSLWKSIWQLKSRPKVKIHLWKAM 76
            IW   K G +SVK+ Y L    ET  +AS S+SS  T  WK +W+L+   K+K+ LW+  
Sbjct: 767  IWPRCKDGNYSVKTGYQLLCESETVDAASSSDSSKQTLFWKCVWKLQIPNKIKVFLWRVC 826

Query: 77   SNALPTLENIKKKGIDTNTCCFLCRCKEENVEHIFWNCKVVRKIWGNFSSALSEVFGFCR 136
            SNALPTLEN+K++ I  +  C  C   EE+  +  W C+ +R IW    S +        
Sbjct: 827  SNALPTLENLKRRKIMEDAKCKACLAAEEDAFYAIWGCEKLRHIWFPCFSWVQ------T 886

Query: 137  DWWSFADFWDFLSKTLNAQEAGKA---SHIIWAIWHKRNQMKQSNSKLDSSKIIADIEAI 196
            +     D  + +S  L  Q   K    + + W IW+ RN++  +   L S KI+    A+
Sbjct: 887  EHPQILDVQELIS--LVGQRIDKLELFAVVAWFIWNHRNKLLVNEKGLASDKILQ--VAM 946

Query: 197  AGRMQCEVSYQSDFAETHPSHACWTPPKEKQWKINVDAAWFDEAGIGGVGWIIRDSDGSL 256
            A   + +V +     +    H  W PP  +++K N D A F E+G  G+G ++R++ G +
Sbjct: 947  AYLSEFQVKFPKAAPKPPKGHVRWCPPMGERFKTNYDGAVFSESGEAGIGVVVRNAKGEV 1006

Query: 257  IGAGGKKSSKKIDINMLESLAIIEGLRQISTKFQAFPELPEIVSVINRDL----IDISEV 316
            I A  +K      + +LE+LA    ++ I     A  +    + ++ R L    +  S +
Sbjct: 1007 IAALAEKILYPGSVEVLEALAARRAVKFIVELGIAGSDFEGDLELVCRALRSAELGHSSI 1066

Query: 317  SGFIDEIWDLALQAQVVLFRFSPRSLNFLAHSLAR 345
               + +I  +        F  + R  N +AH+LAR
Sbjct: 1067 GQIVKDIMSIIGSLSFFSFSHTRRQGNCVAHALAR 1091

[Close]

BLAST of Lcy03g015970 vs. NCBI nr
Match: XP_006491472.1 (uncharacterized protein LOC102626455 [Citrus sinensis])

HSP 1 Score: 143.7 bits (361), Expect = 3.5e-30
Identity = 103/336 (30.65%), Postives = 163/336 (48.51%), Query Frame = 0


Query: 17   IWGADKKGLFSVKSAYHLAVNKETQFSASVSNSSSSTSLWKSIWQLKSRPKVKIHLWKAM 76
            +W  DKKG +SVKS Y LA+N+   F     +S+SS+ LWK  W L    KVKI +W+A+
Sbjct: 1096 LWHFDKKGEYSVKSGYQLALNQ--NFPNEPESSNSSSRLWKIPWMLDLPEKVKIFMWRAL 1155

Query: 77   SNALPTLENIKKKGIDTNTCCFLCRCKEENVEHIFWNCKVVRKIWGNFSSALSEVFGFCR 136
             N LPT EN+ K+       C  C+ + E V H+   CK  RKIW      +       +
Sbjct: 1156 KNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQPSKDHNQ 1215

Query: 137  DWWS-FADFWDFLSKTLNAQEAGKASHIIWAIWHKRNQMKQSNSKLDSSKIIADIEAIAG 196
            D++S   + W   S      EA       W IW  RN+      K DS  + A  +++  
Sbjct: 1216 DFFSAIQEMWSRSS----TAEAELMIVYCWVIWSARNKFIFEGKKSDSRFLAAKADSVLK 1275

Query: 197  RMQCEVSYQSDF---AETHPSHACWTPPKEKQWKINVDAAWFDEAGIGGVGWIIRDSDGS 256
              Q  VS   +     +       W PP +   K+NVDAA   +    G+G I+RD++G 
Sbjct: 1276 AYQ-RVSKPGNVHGAKDRGIDQQKWKPPSQNVLKLNVDAAVSTKDQKVGLGAIVRDAEGK 1335

Query: 257  LIGAGGKKSSKKIDINMLESLAIIEGLR---QI-STKFQAFPELPEIVSVINRDLIDISE 316
            ++  G K++  +  +++ E+ AI  GL+   QI S+      +  E+V ++N      +E
Sbjct: 1336 ILAVGIKQAQFRERVSLAEAEAIHWGLQVANQISSSSLIVESDCKEVVELLNNTKGSRTE 1395

Query: 317  VSGFIDEIWDLALQAQVVLFRFSPRSLNFLAHSLAR 345
            +   + ++   + + + V F F PR+ N  AH+LA+
Sbjct: 1396 IHWILSDVRRESKEFKQVQFSFIPRTCNTYAHALAK 1424

[Close]

BLAST of Lcy03g015970 vs. NCBI nr
Match: XP_023916738.1 (uncharacterized protein LOC112028299 [Quercus suber])

HSP 1 Score: 142.9 bits (359), Expect = 5.9e-30
Identity = 99/349 (28.37%), Postives = 160/349 (45.85%), Query Frame = 0


Query: 17   IWGADKKGLFSVKSAYHLAVNKETQFSASVSNSSSSTSLWKSIWQLKSRPKVKIHLWKAM 76
            +W   K G++S KS Y L     T      SNSS+   LW +IW+L    K+K  LW+A 
Sbjct: 961  VWSESKNGIYSTKSEYRLLAKTATNNQPGPSNSSAHRELWTNIWRLNIPNKIKHFLWRAS 1020

Query: 77   SNALPTLENIKKKGIDTNTCCFLCRCKEENVEHIFWNCKVVRKIWGNFSSALSEVFGFCR 136
            S +LPT +N+  + I TN  C  CR   E+  H  W+C +V++IW         +     
Sbjct: 1021 SESLPTKKNLCHRKIITNDTCDFCRDYPEDGIHALWDCYMVKEIWWKEELCRPHI---SE 1080

Query: 137  DWWSFADFWDFLSKTLNAQEAGKASHIIWAIWHKRNQMKQSNSKLDSSKIIAD-IEAIAG 196
             + +F D +  +   L+ Q A + + I W+IW KRN  +  +  L  S+I +D IE +  
Sbjct: 1081 KFVNFQDLFLGILNKLDNQLAERFAIIAWSIWFKRNSTRTGSPSLPISQIHSDAIERLQE 1140

Query: 197  RMQCEVSYQSDFAETHPSHACWTPPKEKQWKINVDAAWFDEAGIGGVGWIIRDSDGSLIG 256
              Q             P H  W+PP    +K N D A F +    G+G ++RD +G++IG
Sbjct: 1141 FHQVHDMPLVSLQPPTPVH--WSPPPNSWFKANFDGAIFQDLAAAGIGVVLRDHEGNVIG 1200

Query: 257  AGGKKSSKKIDINMLESLAIIEGL---RQISTKFQAFPELPE-IVSVINRDLIDISEVSG 316
            A  ++ +    +  +E+LA    +   R+++ +   F    E I++ +N +   ++    
Sbjct: 1201 ALSERITLPPSVEDVEALACRRAILYARELNLQTVVFEGDSEIIINSLNSNEECLAPFGH 1260

Query: 317  FIDEIWDLALQAQVVLFRFSPRSLNFLAHSLARAVA-------WNGDFH 354
             I++   L    Q V F    R  N +A  LA+          W  D H
Sbjct: 1261 LIEDFRHLVTGFQTVFFSHVRRKGNSVADKLAKLARLTHSPQFWLDDIH 1304

[Close]

BLAST of Lcy03g015970 vs. NCBI nr
Match: CAB4303756.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 140.2 bits (352), Expect = 3.8e-29
Identity = 102/356 (28.65%), Postives = 167/356 (46.91%), Query Frame = 0


Query: 17  IWGADKKGLFSVKSAYHLAVNKE------TQFSASVSNSSSSTSLWKSIWQLKSRPKVKI 76
           IW     G ++V+S Y LA++ +       + +   S+SSS +S+WKS+W + + PK+K 
Sbjct: 585 IWHFSMHGRYTVRSGYELALHLQRNGELGRKGAGEASSSSSQSSVWKSVWHVDAPPKLKA 644

Query: 77  HLWKAMSNALPTLENIKKKGIDTNTCCFLCRCKEENVEHIFWNCKVVRKIWGNFSSALS- 136
            +W+  SN L    N++++ +     C  C  ++E   HIF+ C   R  W  F+S L  
Sbjct: 645 FIWRGCSNILAVRHNLRRRRVPYTGECGFCGFQDETQAHIFFECDFARAFW--FASPLQL 704

Query: 137 EVFGFCRDWWSFADFWDFLSKTLNAQE-AGKASHI----IWAIWHKRNQMKQSNSKLDSS 196
           +V     +   F   W  +  TLN+ E A +A       +W IW  RN       + D +
Sbjct: 705 DVSKLAGE--DFISTWQHMMTTLNSSEHAAEAIQWFVFGLWRIWKARNLAVFDGVQADPT 764

Query: 197 K-IIADIEAIAGRMQCEVSYQSDFAE--THPSHACWTPPKEKQWKINVDAAWFDEAGIGG 256
           + ++  ++ ++     +   Q    +  + P+   W  P     K+N DAAW  +   GG
Sbjct: 765 EAVLLLLKQVSEFRTAKQDLQPQPLQPVSSPAPLSWCKPPPGLLKVNCDAAWSAQRMGGG 824

Query: 257 VGWIIRDSDGSLIGAGGKKSSKKIDINMLESLAIIEGLRQIS----TKFQAFPELPEIVS 316
           VGW+IRDS G L+ AGG+         M+E LAI   L + +    T      +  + + 
Sbjct: 825 VGWVIRDSFGLLLCAGGQGDLHGSSAIMMELLAIRHALSECANFHLTDIIVESDSQKGIL 884

Query: 317 VINRDLIDISEVSGFIDEIWDLALQAQVVLFRFSPRSLNFLAHSLARAVAWNGDFH 354
           ++N      S++ G + +I  L      V F F+PRS N  AHS+A  V+  G  H
Sbjct: 885 MLNGRATVDSDLEGIVFDIRQLVASLSRVSFVFAPRSCNQAAHSVAGFVSKQGGNH 936

[Close]

BLAST of Lcy03g015970 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 5.4e-21
Identity = 93/370 (25.14%), Postives = 158/370 (42.70%), Query Frame = 0


Query: 16  FIWGADKKGLFSVKSAYHL---AVNKETQFSASVSNSSSSTSLWKSIWQLKSRPKVKIHL 75
           + W     G ++VKS Y +    +NK +  S    +  S   +++ IW+ ++ PK++  L
Sbjct: 213 YTWDYTSSGDYTVKSGYWVLTQIINKRS--SPQEVSEPSLNPIYQKIWKSQTSPKIQHFL 272

Query: 76  WKAMSNALPTLENIKKKGIDTNTCCFLCRCKEENVEHIFWNCKVVRKIWGNFSSALSEVF 135
           WK +SN+LP    +  + +   + C  C   +E V H+ + C   R  W   SS    + 
Sbjct: 273 WKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTWA-ISSIPIPLG 332

Query: 136 GFCRDWWSFADFWDFLSKTLNAQEAGKASHII----WAIWHKRNQMKQSNSKLDSSKIIA 195
           G   D      +W F     N Q   KAS ++    W +W  RN++     + ++ +++ 
Sbjct: 333 GEWADSIYVNLYWVFNLGNGNPQWE-KASQLVPWLLWRLWKNRNELVFRGREFNAQEVLR 392

Query: 196 ----DIEAIAGRMQCEVSYQSDFAETHPSHACWTPPKEKQWKINVDAAWFDEAGIGGVGW 255
               D+E    R + E S  +       S   W PP  +  K N DA W  +    G+GW
Sbjct: 393 RAEDDLEEWRIRTEAE-SCGTKPQVNRSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGW 452

Query: 256 IIRDSDGSL--IGAGGKKSSKKIDINMLESLA-IIEGLRQISTKFQAFPELPEI-VSVIN 315
           ++R+  G +  +GA      K +    LE++   +  L +    +  F    ++ + ++N
Sbjct: 453 VLRNEKGEVKWMGARALPKLKSVLEAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILN 512

Query: 316 RDLIDISEVSGFIDEIWDLALQAQVVLFRFSPRSLNFLAHSLARAVAWNGDFHFFCFDPS 371
            D I  S +   I ++  L  Q   V F F PR  N LA  +AR         F  +DP 
Sbjct: 513 NDEIWPS-LKPTIQDLQRLLSQFTEVKFVFIPREGNTLAERVARE-----SLSFLNYDPK 571

[Close]

BLAST of Lcy03g015970 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 90.9 bits (224), Expect = 2.5e-18
Identity = 87/344 (25.29%), Postives = 143/344 (41.57%), Query Frame = 0


Query: 17  IWGADKKGLFSVKSAYHLAVNKETQFSASVSNSSSSTSLWKSIWQLKSRPKVKIHLWKAM 76
           IW  +  G ++V+S Y L  +  +    +++    S  L   IW L   PK+K  LW+A+
Sbjct: 120 IWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRAL 179

Query: 77  SNALPTLENIKKKGIDTNTCCFLCRCKEENVEHIFWNCKVVRKIWGNFSSALSEVFGFCR 136
           S AL T E +  +G+  +  C  C  + E++ H  + C      W    S+L       R
Sbjct: 180 SQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSL------IR 239

Query: 137 DWWSFADFWDFLSKTLNAQEAGKASH--------IIWAIWHKRNQMKQSNSKLDSSKIIA 196
           +     DF + +S  LN  +    S         +IW IW  RN +  +  +   SK + 
Sbjct: 240 NQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRESPSKTVL 299

Query: 197 DIEAIA----GRMQCEVSYQSDFAETHPSHACWTPPKEKQWKINVDAAWFDEAGIGGVGW 256
             +A         Q      S   +   +   W  P     K N DA +  +      GW
Sbjct: 300 SAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFDAGFDVQKLEATGGW 359

Query: 257 IIRDSDGSLIGAGGKKSSKKIDINMLESLAIIEGLRQ--ISTKFQAFPE--LPEIVSVIN 316
           IIR+  G+ I  G  K +   +    E+ A++  L+Q  I    Q F E     ++++IN
Sbjct: 360 IIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQVFMEGDCQTLINLIN 419

Query: 317 RDLIDISEVSGFIDEIWDLALQAQVVLFRFSPRSLNFLAHSLAR 345
             +   S ++  +++I   A +   + F F  R  N LAH LA+
Sbjct: 420 -GISFHSSLANHLEDISFWANKFASIQFGFIRRKGNKLAHVLAK 456

[Close]

BLAST of Lcy03g015970 vs. TAIR 10
Match: AT2G02650.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 90.1 bits (222), Expect = 4.2e-18
Identity = 80/340 (23.53%), Postives = 143/340 (42.06%), Query Frame = 0


Query: 28  VKSAYHLAVNKETQFSASVSNSSSSTSLWKSIWQLKSRPKVKIHLWKAMSNALPTLENIK 87
           ++S Y +A +++     ++     ST + ++IW+L   PK+K  LW+ ++ AL T   ++
Sbjct: 6   LRSGYWVATHEDLLEEEAIQPPPGSTEVKQAIWKLHVAPKIKHFLWRCVTGALATNTRLR 65

Query: 88  KKGIDTNTCCFLCRCKEENVEHIFWNCKVVRKIWGNFSSALSEVFGFCRDWWSFADFWDF 147
            + ID +  C  C  +EE + HI +NC   + +W + +  +         W   + F D 
Sbjct: 66  SRNIDADPICQRCCIEEETIHHIMFNCPYTQSVWRSANIIIG------NQWGPPSSFEDN 125

Query: 148 LSK--------TLNAQEAGKASHIIWAIWHKRN----QMKQSNSKLDSSKIIAD----IE 207
           L++        T N+ +      I+W +W  RN    Q K  +   ++ K I D    + 
Sbjct: 126 LNRLIQLSKTQTTNSLDRFLPFWIMWRLWKSRNVFLFQQKCQSPDYEARKGIQDATEWLN 185

Query: 208 AIAGRMQCEVSYQSDFAET-HPSHACWTPPKEKQWKINVDAAWFDEAGIGGVGWIIRDSD 267
           A        V   ++  +T     + W PP E   K N D+ +   +     GW IR+ +
Sbjct: 186 ANETTENTNVHVATNPIQTSRRDSSQWNPPPEGWVKCNFDSGYTQGSPYTRSGWTIRECN 245

Query: 268 GSLIGAGGKKSSKKIDINMLESLAIIEGLRQI---STKFQAF-PELPEIVSVINRDLIDI 327
           G ++  G  K          E+L  +  L+ I     ++  F  +   +V++IN    D 
Sbjct: 246 GHIVLCGNAKLQSSTCSLHAEALGFLHALQVIWAHGLRYVWFESDSKSLVTLINNG-EDH 305

Query: 328 SEVSGFIDEIWDLALQAQVVLFRFSPRSLNFLAHSLARAV 347
           S +   I +I    L+       F  R  N  A +LA  V
Sbjct: 306 SLLGTLIYDIRHWMLKLPYCSLEFVNRERNSAADALASHV 338

[Close]

BLAST of Lcy03g015970 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 78.6 bits (192), Expect = 1.3e-14
Identity = 76/322 (23.60%), Postives = 132/322 (40.99%), Query Frame = 0


Query: 59  IWQLKSRPKVKIHLWKAMSNALPTLENIKKKGIDTNTCCFLCRCKEENVEHIFWNCKVVR 118
           IW+LK+ PK+K  LWK +S AL T +N+K++ I  +  C  C  ++E  +H+F++C   +
Sbjct: 18  IWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQ 77

Query: 119 KIWGNFSSALSEV--FGFCRDWWSFADFWDFLSKTL---NAQEAGKASHIIWAIWHKRNQ 178
           ++W        E+   G   +          LS  L     Q    A  I+W +W  RNQ
Sbjct: 78  QVWRASGIPHQELRTTGITME----TKMELLLSSCLANRQPQLFNLAIWILWRLWKSRNQ 137

Query: 179 MKQSNSKLDSSKIIADIEAIAGRMQCEVSY-QSDFAETHPS--------HACWTPPKEKQ 238
           +      +     +          +   +Y QS   + H S           W  P    
Sbjct: 138 LVFQQKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQVHSSRHQQPTMARTKWQRPPSTW 197

Query: 239 WKINVDAAWFDEAGIGGVGWIIRDSDGSLIGAGGKKSSKKIDINMLESLAIIEGLR---- 298
            K N D A+  +      GW++RD +G  +G+G    S   D    E  A+I  ++    
Sbjct: 198 IKYNYDGAFNHQTRNAKAGWLMRDENGVYMGSGQAIGSTTSDSLESEFQALIIAMQHAWS 257

Query: 299 QISTKFQAFPELPEIVSVINRDLIDISEVSGFID-EIWDLALQAQVVLFRFSPRSLNFLA 358
           Q   K     +  ++  ++N + ++    +   +   W    +  V  F++ PR+ N  A
Sbjct: 258 QGYRKVIFEGDSKQVEELMNNEKLNFGRFNWIREGRFWQKRFEEAV--FKWVPRTNNQPA 317

Query: 359 HSLAR-AVAWNGDFHFFCFDPS 361
             LA+  +  N  F F  + P+
Sbjct: 318 DILAKHHLQPNQSFKFHYYVPA 333

[Close]

BLAST of Lcy03g015970 vs. TAIR 10
Match: AT1G10000.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 3.5e-12
Identity = 66/296 (22.30%), Postives = 123/296 (41.55%), Query Frame = 0


Query: 66  PKVKIHLWKAMSNALPTLENIKKKGIDTNTCCFLCRCKEENVEHIFWNCKVVRKIWGNFS 125
           PK+K+ LWKA + ALP    + ++ I +   C  C   E +  H+ ++C    ++W    
Sbjct: 2   PKIKLFLWKAAAGALPVGAQLVRRHISSTWDCARCGAPETST-HMLFHCDFAAQVWNLAP 61

Query: 126 SALSEVFGFCRDWWSFADFWDFLSKTLNAQEAGKAS-----HIIWAIWHKRNQMKQSNSK 185
             L    G         +  + L KT+     G  +      I W IW  RNQ+   NS 
Sbjct: 62  LQL----GHIPIGTPILEALNLLKKTIVLPPVGIHTATLFPWICWHIWKARNQLIFQNSH 121

Query: 186 LDSSKIIADIEAIAGRMQCEVSYQSDFAETHPSHACWTPPKEKQWKIN------VDAAWF 245
                  + IE +   +Q  +++QS      P     TP       +       VDAAW 
Sbjct: 122 ------FSVIETVTKAVQDALAWQSAQLAL-PKVRVATPRPNSTTTLTHDFLCYVDAAWQ 181

Query: 246 DEAGIGGVGWIIR-----DSDGSLIGAGGKKSSKKIDINMLE-SLAIIEGLRQISTKFQA 305
            ++ + G GW+ +     + + +   AG ++    +         A++  L+   +    
Sbjct: 182 QQSSLAGSGWVFQATSHSEKEITTFSAGCRRFPSPLAAEAWAIKSAMLHALQLERSDLLV 241

Query: 306 FPELPEIVSVINRDLIDISEVSGFIDEIWDLALQAQVVLFRFSPRSLNFLAHSLAR 345
             +   IV  +N + + ++E+ G + EI  +  + + + F+F PR +N +A + A+
Sbjct: 242 LSDSKSIVDALNSN-VSLNEIFGLLVEIRSIRNRFRSISFQFIPRLVNSIADAAAK 284

The following BLAST results are available for this feature:

BLAST of Lcy03g015970 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy03g015970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9H1N4	2.3e-32	28.05	RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33433 ...	[more]
A0A2N9J109	6.8e-32	30.65	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58001 PE=4 SV=1	[more]
A0A2N9I921	5.8e-31	29.77	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]
A0A6J5WPU6	1.9e-29	28.65	Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=...	[more]
A0A2N9F2A9	2.4e-29	26.07	RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8891 P...	[more]

BLAST of Lcy03g015970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_024037590.1	1.2e-33	32.05	uncharacterized protein LOC112097210 [Citrus clementina]	[more]
XP_030946032.1	3.5e-30	29.55	uncharacterized protein LOC115970553 [Quercus lobata]	[more]
XP_006491472.1	3.5e-30	30.65	uncharacterized protein LOC102626455 [Citrus sinensis]	[more]
XP_023916738.1	5.9e-30	28.37	uncharacterized protein LOC112028299 [Quercus suber]	[more]
CAB4303756.1	3.8e-29	28.65	unnamed protein product [Prunus armeniaca]	[more]

BLAST of Lcy03g015970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29090.1	5.4e-21	25.14	Ribonuclease H-like superfamily protein	[more]
AT3G09510.1	2.5e-18	25.29	Ribonuclease H-like superfamily protein	[more]
AT2G02650.1	4.2e-18	23.53	Ribonuclease H-like superfamily protein	[more]
AT3G25270.1	1.3e-14	23.60	Ribonuclease H-like superfamily protein	[more]
AT1G10000.1	3.5e-12	22.30	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 223..347 e-value: 4.0E-7 score: 32.1
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 228..345 e-value: 3.6E-12 score: 46.2
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 26..121 e-value: 5.7E-20 score: 71.8
None	No IPR available	PANTHER	PTHR46736:SF6	SUBFAMILY NOT NAMED	coord: 16..266
None	No IPR available	PANTHER	PTHR46736	FAMILY NOT NAMED	coord: 16..266
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 227..344 e-value: 6.19187E-16 score: 71.5764
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 223..347

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g015970.1	Lcy03g015970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity