Lcy03g015940 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g015940
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	pentatricopeptide repeat-containing protein PNM1, mitochondrial-like
Location	Chr03: 49865691 .. 49867749 (+)
RNA-Seq Expression	Lcy03g015940
Synteny	Lcy03g015940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCTCCCTCTCGCGAGCTTCTTCCAAGGTGAGTTCCATTTTCCTTTTCTTCTTCAGAGCTTATCGTCCGTAACAATGCCGCCATTACCGTATCTGCATCTTCGAAGGCTTTTTATTCGATCTCTATCATCATTTTCTTCTTTATCTGCTTGTTCGTCTTCGAGTTCTTTGAATGAAGCTACGAGGAGTGTGCTTTTACATCGGAATTTGACCTCTCTCTGCCACCATTTCCGTCATCATGGGCCGGCATTGAGGTTTTCTCATCTCTCGCAACTTTCACTTTCTCATTCGTTCTTTTCTGAATCCGGCGAGAATGACGTGGATCAAACATCGCAGTCACTTGCGTCCGAGCTTCTTAAAGACCCGGATTTGGATCCTCTACCAATTACAAATCGCCTTCAACTTAGCTTTTCGCATGTTAAACCGTATCCGGAGTTAGTCCTCAAGACGCTCAATCTCTCCTCGGAAGCTGGCCGGACGGTATTAGGGTTTAATGAGTGGTTAGTATCGAATCCTGATTTTCATCACACGGACGAGACTATATCGTATTTTGTTGATTATTTTGGTCGTAGAAAGGATTTCAATTCGATTCATGAAGTTCTTGCGAAGGGTTTAGGGATCAGTGGGGCTAAAACCCTGCGGTCGACTATTGATCGGTTCGCTCGTGCTGGGCGACCCACAAAGTTGATATCATTTTTTGAGACAATGGAGAAGAATTACGGGTTTAAGAGGGATAAAGAGTCGCTTAGGATGGTGGTGGAGAAGCTTTGTGAAAATGGCTACGCGAGCCATGCAGAGAAGGTGGTCAAAGATTTGGCGAACGAATTTTTCCCTGACGAAGCAATATGCGACACTCTGATCAAAGGATGGTGCGTCGATGAGAAGCTTGATGAAGCGAAAAGGCTGGCGGGTGAGATGTATAGGGGAGGGTTTGAGTTAGGGACAACGGCCTATAATGCTCTGCTTGACTGTGTTTGCAAGCTCTGTAGGAAAAAGGATCCGTTTAGGCTTCAATCTGAAGCTGAGGAAATTCTAGTGGAAATGGATTATCGTGGGGTTCCACGAAATGTGGAAACTTTCAATGTGTTGATCAATAATTTGTGCAAGATTAGGAAAACTACTGATGCAGTAAATTTGTTTCATCGAATGGGGGAGTGGGGATGTCTTCCTAATGCTGAAACGTTCCTTCTTTTGATTAAAAGTTTGTATCAAGCGGCAAGGACGGGAGAAGGGGATGAAATGATTGACAGGATGAGGTCTGCTGGATATGGTGATGCACTTGATAAGAAGGCTTATTATGAGTTTCTGAAGATTTTGTGTGGGATAGAGAGGATTGATCATGCTTTAATTGTCTTTGCAAAGATGAAGAAGGACGGGTGTGAACCTGGGATTAAGACATATGATCTATTGATGGGAAAGTTTTGTGCCCATAATCGTCTAGACAAAGCAAATTCACTCTTTAATGAAGCTCAAAAACGGGGAGGCCCAGTTACTCCAAAAGCTTATCAGGTTGACCCAAGATATGTTAAGAAGCCAAAGGTGAAGAAGGTTGAGAAGAAGAGGGAGACATTGCCTGAGAAAATGGCAAGGAAAAGGAGACGACTGAAGCAAATTCGATTAAGTTTTGTCAAGAAACCGAAGAAGGCAATGCGTCGAGCATTTTGATAACGATAATTATGTAGCACCAGAATGCATACGAATTGAAGTTTGTTTTCAAACTTGATAAATTCTTTTCTATGATGTCCTCTGTTTTCTTTTGCACCTGCCCCTCCTTCCCTTCATAATATTAGCAGCAGAGAAATAAGAGGTTTTTGTTTTTGCCCTGTTTGGTATTATGGCCCGAGCTGAAACAAATACGGGACAATGGCAGCTCTAACTTGCCATTCCATTATATTTGACAAAGGAACACTATTGAATTTTGGTGGATCGAACCTCCAGGTTTGTTTAGGAAATTGTAACTTAAGAATACTGCATCCTTTTTAATTTTCCTTTACTTGGCCATAATTTCTATCTGCAGAATGTAAAATGAAGGTACTGCTTGTTCATATTTGATTAAATG

mRNA sequence

CAGCTCCCTCTCGCGAGCTTCTTCCAAGGTGAGTTCCATTTTCCTTTTCTTCTTCAGAGCTTATCGTCCGTAACAATGCCGCCATTACCGTATCTGCATCTTCGAAGGCTTTTTATTCGATCTCTATCATCATTTTCTTCTTTATCTGCTTGTTCGTCTTCGAGTTCTTTGAATGAAGCTACGAGGAGTGTGCTTTTACATCGGAATTTGACCTCTCTCTGCCACCATTTCCGTCATCATGGGCCGGCATTGAGGTTTTCTCATCTCTCGCAACTTTCACTTTCTCATTCGTTCTTTTCTGAATCCGGCGAGAATGACGTGGATCAAACATCGCAGTCACTTGCGTCCGAGCTTCTTAAAGACCCGGATTTGGATCCTCTACCAATTACAAATCGCCTTCAACTTAGCTTTTCGCATGTTAAACCGTATCCGGAGTTAGTCCTCAAGACGCTCAATCTCTCCTCGGAAGCTGGCCGGACGGTATTAGGGTTTAATGAGTGGTTAGTATCGAATCCTGATTTTCATCACACGGACGAGACTATATCGTATTTTGTTGATTATTTTGGTCGTAGAAAGGATTTCAATTCGATTCATGAAGTTCTTGCGAAGGGTTTAGGGATCAGTGGGGCTAAAACCCTGCGGTCGACTATTGATCGGTTCGCTCGTGCTGGGCGACCCACAAAGTTGATATCATTTTTTGAGACAATGGAGAAGAATTACGGGTTTAAGAGGGATAAAGAGTCGCTTAGGATGGTGGTGGAGAAGCTTTGTGAAAATGGCTACGCGAGCCATGCAGAGAAGGTGGTCAAAGATTTGGCGAACGAATTTTTCCCTGACGAAGCAATATGCGACACTCTGATCAAAGGATGGTGCGTCGATGAGAAGCTTGATGAAGCGAAAAGGCTGGCGGGTGAGATGTATAGGGGAGGGTTTGAGTTAGGGACAACGGCCTATAATGCTCTGCTTGACTGTGTTTGCAAGCTCTGTAGGAAAAAGGATCCGTTTAGGCTTCAATCTGAAGCTGAGGAAATTCTAGTGGAAATGGATTATCGTGGGGTTCCACGAAATGTGGAAACTTTCAATGTGTTGATCAATAATTTGTGCAAGATTAGGAAAACTACTGATGCAGTAAATTTGTTTCATCGAATGGGGGAGTGGGGATGTCTTCCTAATGCTGAAACGTTCCTTCTTTTGATTAAAAGTTTGTATCAAGCGGCAAGGACGGGAGAAGGGGATGAAATGATTGACAGGATGAGGTCTGCTGGATATGGTGATGCACTTGATAAGAAGGCTTATTATGAGTTTCTGAAGATTTTGTGTGGGATAGAGAGGATTGATCATGCTTTAATTGTCTTTGCAAAGATGAAGAAGGACGGGTGTGAACCTGGGATTAAGACATATGATCTATTGATGGGAAAGTTTTGTGCCCATAATCGTCTAGACAAAGCAAATTCACTCTTTAATGAAGCTCAAAAACGGGGAGGCCCAGTTACTCCAAAAGCTTATCAGGTTGACCCAAGATATGTTAAGAAGCCAAAGGTGAAGAAGGTTGAGAAGAAGAGGGAGACATTGCCTGAGAAAATGGCAAGGAAAAGGAGACGACTGAAGCAAATTCGATTAAGTTTTGTCAAGAAACCGAAGAAGGCAATGCGTCGAGCATTTTGATAACGATAATTATGTAGCACCAGAATGCATACGAATTGAAGTTTGTTTTCAAACTTGATAAATTCTTTTCTATGATGTCCTCTGTTTTCTTTTGCACCTGCCCCTCCTTCCCTTCATAATATTAGCAGCAGAGAAATAAGAGGTTTTTGTTTTTGCCCTGTTTGGTATTATGGCCCGAGCTGAAACAAATACGGGACAATGGCAGCTCTAACTTGCCATTCCATTATATTTGACAAAGGAACACTATTGAATTTTGGTGGATCGAACCTCCAGGTTTGTTTAGGAAATTGTAACTTAAGAATACTGCATCCTTTTTAATTTTCCTTTACTTGGCCATAATTTCTATCTGCAGAATGTAAAATGAAGGTACTGCTTGTTCATATTTGATTAAATG

Coding sequence (CDS)

ATGCCGCCATTACCGTATCTGCATCTTCGAAGGCTTTTTATTCGATCTCTATCATCATTTTCTTCTTTATCTGCTTGTTCGTCTTCGAGTTCTTTGAATGAAGCTACGAGGAGTGTGCTTTTACATCGGAATTTGACCTCTCTCTGCCACCATTTCCGTCATCATGGGCCGGCATTGAGGTTTTCTCATCTCTCGCAACTTTCACTTTCTCATTCGTTCTTTTCTGAATCCGGCGAGAATGACGTGGATCAAACATCGCAGTCACTTGCGTCCGAGCTTCTTAAAGACCCGGATTTGGATCCTCTACCAATTACAAATCGCCTTCAACTTAGCTTTTCGCATGTTAAACCGTATCCGGAGTTAGTCCTCAAGACGCTCAATCTCTCCTCGGAAGCTGGCCGGACGGTATTAGGGTTTAATGAGTGGTTAGTATCGAATCCTGATTTTCATCACACGGACGAGACTATATCGTATTTTGTTGATTATTTTGGTCGTAGAAAGGATTTCAATTCGATTCATGAAGTTCTTGCGAAGGGTTTAGGGATCAGTGGGGCTAAAACCCTGCGGTCGACTATTGATCGGTTCGCTCGTGCTGGGCGACCCACAAAGTTGATATCATTTTTTGAGACAATGGAGAAGAATTACGGGTTTAAGAGGGATAAAGAGTCGCTTAGGATGGTGGTGGAGAAGCTTTGTGAAAATGGCTACGCGAGCCATGCAGAGAAGGTGGTCAAAGATTTGGCGAACGAATTTTTCCCTGACGAAGCAATATGCGACACTCTGATCAAAGGATGGTGCGTCGATGAGAAGCTTGATGAAGCGAAAAGGCTGGCGGGTGAGATGTATAGGGGAGGGTTTGAGTTAGGGACAACGGCCTATAATGCTCTGCTTGACTGTGTTTGCAAGCTCTGTAGGAAAAAGGATCCGTTTAGGCTTCAATCTGAAGCTGAGGAAATTCTAGTGGAAATGGATTATCGTGGGGTTCCACGAAATGTGGAAACTTTCAATGTGTTGATCAATAATTTGTGCAAGATTAGGAAAACTACTGATGCAGTAAATTTGTTTCATCGAATGGGGGAGTGGGGATGTCTTCCTAATGCTGAAACGTTCCTTCTTTTGATTAAAAGTTTGTATCAAGCGGCAAGGACGGGAGAAGGGGATGAAATGATTGACAGGATGAGGTCTGCTGGATATGGTGATGCACTTGATAAGAAGGCTTATTATGAGTTTCTGAAGATTTTGTGTGGGATAGAGAGGATTGATCATGCTTTAATTGTCTTTGCAAAGATGAAGAAGGACGGGTGTGAACCTGGGATTAAGACATATGATCTATTGATGGGAAAGTTTTGTGCCCATAATCGTCTAGACAAAGCAAATTCACTCTTTAATGAAGCTCAAAAACGGGGAGGCCCAGTTACTCCAAAAGCTTATCAGGTTGACCCAAGATATGTTAAGAAGCCAAAGGTGAAGAAGGTTGAGAAGAAGAGGGAGACATTGCCTGAGAAAATGGCAAGGAAAAGGAGACGACTGAAGCAAATTCGATTAAGTTTTGTCAAGAAACCGAAGAAGGCAATGCGTCGAGCATTTTGA

Protein sequence

MPPLPYLHLRRLFIRSLSSFSSLSACSSSSSLNEATRSVLLHRNLTSLCHHFRHHGPALRFSHLSQLSLSHSFFSESGENDVDQTSQSLASELLKDPDLDPLPITNRLQLSFSHVKPYPELVLKTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGLGISGAKTLRSTIDRFARAGRPTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGYASHAEKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDAVNLFHRMGEWGCLPNAETFLLLIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERIDHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGGPVTPKAYQVDPRYVKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF

Homology

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BLAST of Lcy03g015940 vs. ExPASy Swiss-Prot
Match: Q9FME4 (Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PNM1 PE=1 SV=1)

HSP 1 Score: 621.7 bits (1602), Expect = 7.6e-177
Identity = 324/531 (61.02%), Postives = 398/531 (74.95%), Query Frame = 0


Query: 1   MPP-LPYLHLRRLFIRSLSSFSSLSACSSSSSLNEATRSVLLHRNLTSLCHHFRHHGPAL 60
           MPP LP L LRRL +RS  S SS++   S          ++  + L S     R    + 
Sbjct: 1   MPPSLPSLQLRRLLLRSFISSSSVNTLQSQP-------RIISSKPLFSPLPPSR----SS 60

Query: 61  RFSHLSQLSLSHSFFSESGENDVDQTSQSLASELLKDPDLDPLPITNRLQLSFSHVKPYP 120
            FS       S    +ES   D ++ + S + EL  +PD +   I+ R  LSFSH+ P P
Sbjct: 61  IFSTFPSRFFSSETNAESESLDSNEIALSFSKELTGNPDAESQTISQRFNLSFSHITPNP 120

Query: 121 ELVLKTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKG 180
           +L+L+TLNLS EAGR  LGFNEWL SN +F HTDET+S+FVDYFGRRKDF  + E+++K 
Sbjct: 121 DLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISKY 180

Query: 181 LGISGAKTLRSTIDRFARAGRPTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGYASH 240
            GI+G KTL S IDR  RAGRP ++  FFE ME +YG KRDKESL +VV+KLCE G+AS 
Sbjct: 181 KGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASI 240

Query: 241 AEKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDC 300
           AEK+VK+ ANE FPDE ICD LI GWC+ EKLDEA RLAGEM RGGFE+GT AYN +LDC
Sbjct: 241 AEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDC 300

Query: 301 VCKLCRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDAVNLFHRMG 360
           VCKLCRKKDPF+LQ E E++L+EM++RGVPRN ETFNVLINNLCKIR+T +A+ LF RMG
Sbjct: 301 VCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMG 360

Query: 361 EWGCLPNAETFLLLIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIER 420
           EWGC P+AET+L+LI+SLYQAAR GEGDEMID+M+SAGYG+ L+KK YY FLKILCGIER
Sbjct: 361 EWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIER 420

Query: 421 IDHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGGPVTPKAYQV 480
           ++HA+ VF  MK +GC+PGIKTYDLLMGK CA+N+L +AN L+ EA K+G  V+PK Y+V
Sbjct: 421 LEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRV 480

Query: 481 DPRYVKKPKVKKVE---KKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRR 528
           DPR++KK K K+V+   KKRETLPEK ARK++RLKQI +SFVKKP   MRR
Sbjct: 481 DPRFMKK-KTKEVDSNVKKRETLPEKTARKKKRLKQINMSFVKKPHNKMRR 519

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BLAST of Lcy03g015940 vs. ExPASy Swiss-Prot
Match: Q9FLJ6 (Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g61370 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.3e-30
Identity = 108/474 (22.78%), Postives = 218/474 (45.99%), Query Frame = 0


Query: 60  RFSHLSQLSLSHSFFSESGENDVDQTSQSLASELLKDP--DLDPLPITNRLQLSFSHVKP 119
           RF++L+  +    +F      D  +T+      ++  P   LD L   N  Q+S   V P
Sbjct: 10  RFTYLTSTAKLTRYFCSHHLVDRSETALHEVIRIVSSPVGGLDDLE-ENLNQVS---VSP 69

Query: 120 YPELVLKTLN--LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNSIHEV 179
              LV + +    +  + R +L F  W   +      D+  +Y +     +KD  ++  +
Sbjct: 70  SSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQIL 129

Query: 180 LA---KGLGISGAKTLRSTIDRFARAGRPTKLISFFETMEKNYGFKRDKESLRMVVEKLC 239
           L+   K       +T     +   + G+    I  F+ ++K +   +D  ++  ++  LC
Sbjct: 130 LSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDK-FSCPQDGFTVTAIISALC 189

Query: 240 ENGYASHAEKVVKDLANEFFPDE-AICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTT 299
             G+   A  V+    +    +E ++  +L+ GW V   + EA+R+  +M   G      
Sbjct: 190 SRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLF 249

Query: 300 AYNALLDCVCKLCRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDA 359
            +N+LL C+C+    ++P  L  EA  I++EM    +     ++N+L++ L + R+  ++
Sbjct: 250 CFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRES 309

Query: 360 VNLFHRMGEWGCLPNAETFLLLIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFL 419
             +  +M   GC P+  ++  +++ LY   R G+G++++D M   G+    ++K YY+ +
Sbjct: 310 CQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRP--ERKFYYDLI 369

Query: 420 KILCGIERIDHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGGP 479
            +LCG+ER++ AL +F KMK+       + YDLL+ K C     +K   L+ EA      
Sbjct: 370 GVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVT 429

Query: 480 VTPKAYQVDPRYVKKPKVKKVEKKRETLPEKMARKR--RRLKQIRLSFVKKPKK 524
           ++     +DP   +  K  K++++   +  +    +   R+ + +     KPK+
Sbjct: 430 LSCSISLLDPSVTEVFKPMKMKEEAAMVDRRALNLKIHARMNKTKPKLKLKPKR 476

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BLAST of Lcy03g015940 vs. ExPASy Swiss-Prot
Match: P0C8A0 (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX=3702 GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 2.2e-30
Identity = 94/367 (25.61%), Postives = 161/367 (43.87%), Query Frame = 0


Query: 108 LQLSFSHVKPYPELVLKTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRK 167
           L L+ S +   P L+++ L+   +AG     F  W    P + H+ E     V    + +
Sbjct: 86  LALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMR 145

Query: 168 DFNS----IHEVLAKGLGISGAKTLRSTIDRFARAGRPTKLISFFETMEKNYGFKRDKES 227
            F +    I E+      +   +     + RFA A    K +   + M K YG + D+  
Sbjct: 146 QFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPK-YGLEPDEYV 205

Query: 228 LRMVVEKLCENGYASHAEKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYR 287
              +++ LC+NG    A KV +D+  +F P+     +L+ GWC + KL EAK +  +M  
Sbjct: 206 FGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKE 265

Query: 288 GGFELGTTAYNALLDCVCKLCRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLC 347
            G E     +  LL       +  D       A +++ +M  RG   NV  + VLI  LC
Sbjct: 266 AGLEPDIVVFTNLLSGYAHAGKMAD-------AYDLMNDMRKRGFEPNVNCYTVLIQALC 325

Query: 348 KIRKTTD-AVNLFHRMGEWGCLPNAETFLLLIKSLYQAARTGEGDEMIDRMRSAGYGDAL 407
           +  K  D A+ +F  M  +GC  +  T+  LI    +     +G  ++D MR  G   + 
Sbjct: 326 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS- 385

Query: 408 DKKAYYEFLKILCGIERIDHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLF 467
            +  Y + +      E+ +  L +  KMK+ GC P +  Y++++   C    + +A  L+
Sbjct: 386 -QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLW 442

Query: 468 NEAQKRG 470
           NE +  G
Sbjct: 446 NEMEANG 442

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BLAST of Lcy03g015940 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 5.5e-26
Identity = 78/286 (27.27%), Postives = 132/286 (46.15%), Query Frame = 0


Query: 186 KTLRSTIDRFARAGRPTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGYASHAEKVVK 245
           KT  + +  +   G     +   E M + +G      S+ ++V   C+ G    A   ++
Sbjct: 225 KTFTTVMQGYIEEGDLDGALRIREQMVE-FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQ 284

Query: 246 DLANE--FFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKL 305
           +++N+  FFPD+   +TL+ G C    +  A  +   M + G++     YN+++  +CKL
Sbjct: 285 EMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 344

Query: 306 CRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDAVNLFHRMGEWGC 365
              K       EA E+L +M  R    N  T+N LI+ LCK  +  +A  L   +   G 
Sbjct: 345 GEVK-------EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 404

Query: 366 LPNAETFLLLIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERIDHA 425
           LP+  TF  LI+ L          E+ + MRS G     D+  Y   +  LC   ++D A
Sbjct: 405 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP--DEFTYNMLIDSLCSKGKLDEA 464

Query: 426 LIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRG 470
           L +  +M+  GC   + TY+ L+  FC  N+  +A  +F+E +  G
Sbjct: 465 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500

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BLAST of Lcy03g015940 vs. ExPASy Swiss-Prot
Match: Q9CAM8 (Pentatricopeptide repeat-containing protein At1g63150 OS=Arabidopsis thaliana OX=3702 GN=At1g63150 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.2e-25
Identity = 105/411 (25.55%), Postives = 178/411 (43.31%), Query Frame = 0


Query: 72  SFFSESGENDVDQTSQSLAS---ELLKDPDLDPLPITNRLQLSFSHVK--PYPELVLKTL 131
           SFF+  G    +++  S +    E+L++   D + + + + L    VK  P+P +V    
Sbjct: 29  SFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNK 88

Query: 132 NLSSEAG----RTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGLGI 191
            LS+ A       V+   E +       H   T S F++ F RR   +    VLAK + +
Sbjct: 89  LLSAVAKMNKFELVISLGEQM-QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL 148

Query: 192 S---GAKTLRSTIDRFARAGRPTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGYASH 251
                  TL S ++ +  + R +  ++  + M +  G+K D  +   ++  L  +  AS 
Sbjct: 149 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE-MGYKPDTFTFTTLIHGLFLHNKASE 208

Query: 252 AEKVVKDLANE-FFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLD 311
           A  +V  +      PD     T++ G C    +D A  L  +M     +     +N ++D
Sbjct: 209 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 268

Query: 312 CVCKLCRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDAVNLFHRM 371
            +CK       +R    A ++  EM+ +G+  NV T+N LIN LC   + +DA  L   M
Sbjct: 269 SLCK-------YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 328

Query: 372 GEWGCLPNAETFLLLIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIE 431
            E    PN  TF  LI + ++  +  E +++ + M         D   Y   +   C   
Sbjct: 329 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP--DTITYNLLINGFCMHN 388

Query: 432 RIDHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRG 470
           R+D A  +F  M    C P I+TY+ L+  FC   R++    LF E  +RG
Sbjct: 389 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG 428

[Close]

BLAST of Lcy03g015940 vs. ExPASy TrEMBL
Match: A0A6J1HLZ2 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111465769 PE=4 SV=1)

HSP 1 Score: 967.6 bits (2500), Expect = 2.1e-278
Identity = 486/529 (91.87%), Postives = 506/529 (95.65%), Query Frame = 0


Query: 1   MPPLPYLHLRRLFIRSLSSFSSLSACSSSSSLNEATRSVLLHRNLTSLCHHFRHHGPALR 60
           MPPLPYLHLRR FIRSLSS S LSA SSSSSLNEA++SV+L R+LTS+ HHFR  GPAL 
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRRGPALG 60

Query: 61  FSHLSQLSLSHSFFSESGENDVDQTSQSLASELLKDPDLDPLPITNRLQLSFSHVKPYPE 120
            S+LSQLSLSHSFFSESGENDVDQ+SQSLA+ELLKDPDLDPLPIT RLQL FSHVKP PE
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLCFSHVKPNPE 120

Query: 121 LVLKTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGL 180
           L+L TLN SSEAGRTVLGFNEWL+SNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKG 
Sbjct: 121 LILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGYASHA 240
           GISGAKTLRSTIDRFARAGRPTKL+SFFETMEKNYGFKRDKES+RMVVEKLCENGYASHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHA 240

Query: 241 EKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EK+VKDLA+EFFPDEAICDTLIKGWCV+EKLDEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDAVNLFHRMGE 360
           CKLCRKKDPF+LQSEAEEILVEMD RGVPRNVETFNVLINNLCKIRKTTDA+NLFHRMGE
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 361 WGCLPNAETFLLLIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI 420
           WGC PNAETFL+LIKSLYQAARTGEGDEMIDRMRSAGY DALDKKAYYEFLKILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGGPVTPKAYQVD 480
           DHALIVFAKMKKDGCEPGIKTYDLLMGK CAHNRLD+ANSLFNEAQKRG PVTPKAYQV+
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 481 PRYVKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 530
           PRY KKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRAF
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529

[Close]

BLAST of Lcy03g015940 vs. ExPASy TrEMBL
Match: A0A6J1EYW9 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111440816 PE=4 SV=1)

HSP 1 Score: 966.5 bits (2497), Expect = 4.7e-278
Identity = 486/529 (91.87%), Postives = 505/529 (95.46%), Query Frame = 0


Query: 1   MPPLPYLHLRRLFIRSLSSFSSLSACSSSSSLNEATRSVLLHRNLTSLCHHFRHHGPALR 60
           MPPLPYLHLRR FIRSLSS S LSA SSSSSLNEA++SV+L R+LTS+ HHFR  GPAL 
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG 60

Query: 61  FSHLSQLSLSHSFFSESGENDVDQTSQSLASELLKDPDLDPLPITNRLQLSFSHVKPYPE 120
            S+LSQLSLSHSFFSESGENDVDQ+SQSLA+ELLKDPDLDPLPIT RLQL FSHVKP PE
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLIFSHVKPNPE 120

Query: 121 LVLKTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGL 180
           LVL TLNLSSEAGRTVLGFNEWL+SNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKG 
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGYASHA 240
           GISGAKTLRSTIDRFARAGRPTKL+SFFETMEKNYGFKRDKES+RMVVEKLCENGYASHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHA 240

Query: 241 EKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EK+VKDLA+EFFPDEAICD LIKGWCVDEK DEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLAHEFFPDEAICDALIKGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDAVNLFHRMGE 360
           CKLCRKKDPF+LQSEAEEILVEMD RGVPRNVETFNVLINNLCKIRKTTDA+NLFHRMGE
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 361 WGCLPNAETFLLLIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI 420
           WGC PNAETFL+LIKSLYQAARTGEGDEMIDRMRSAGY DALDKKAYYEFLKILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGGPVTPKAYQVD 480
           DHALIVFAKMKKDGCEPGIKTYDLLMGK CAHNRLD+ANSLFNEAQKRG PVTPKAYQV+
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 481 PRYVKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 530
           PRY KKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPK+ MRRAF
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKRTMRRAF 529

[Close]

BLAST of Lcy03g015940 vs. ExPASy TrEMBL
Match: A0A5A7UTF6 (Pentatricopeptide repeat-containing protein PNM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold346G00020 PE=4 SV=1)

HSP 1 Score: 933.3 bits (2411), Expect = 4.4e-268
Identity = 470/529 (88.85%), Postives = 492/529 (93.01%), Query Frame = 0


Query: 1   MPPLPYLHLRRLFIRSLSSFSSLSACSSSSSLNEATRSVLLHRNLTSLCHHFRHHGPALR 60
           MPPLPYL LR LF+RSLSS       SS++SLN++ R+VLLHRNLTSL HHFRHHG ALR
Sbjct: 1   MPPLPYLQLRSLFLRSLSS-------SSTNSLNDSARTVLLHRNLTSLFHHFRHHGAALR 60

Query: 61  FSHLSQLSLSHSFFSESGENDVDQTSQSLASELLKDPDLDPLPITNRLQLSFSHVKPYPE 120
           FS    LSLSHSF SESG NDVDQTSQSLASELLKDPD DPLPIT RLQLSFSHVKP PE
Sbjct: 61  FSSPLYLSLSHSFSSESGNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPE 120

Query: 121 LVLKTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGL 180
           LV  TLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFN++HEVLAKGL
Sbjct: 121 LVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGL 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGYASHA 240
           GI+G KTL S+I RFARAGRPTKLISFFETMEKNYG KRDK+SLRMVVEKL ENG+ SHA
Sbjct: 181 GINGPKTLESSIHRFARAGRPTKLISFFETMEKNYGLKRDKKSLRMVVEKLSENGFGSHA 240

Query: 241 EKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EK+VKDLANEFFPDEAICDTLIKGWCV+EKLDEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDAVNLFHRMGE 360
           CKLCRKKDPFRL SEAEEILVEMD RGVPRNVETFNVLINNLCKIR+TTDAVNLFHRMGE
Sbjct: 301 CKLCRKKDPFRLHSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGE 360

Query: 361 WGCLPNAETFLLLIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI 420
           WGC PNAETFL+LI+SLYQAARTGEGDEMIDRM+S GYGDALDKKAYYEF+KILCGIERI
Sbjct: 361 WGCHPNAETFLILIRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMKILCGIERI 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGGPVTPKAYQVD 480
           DHAL+VFAKMKKDGCEPGIKTYDLLMGK CAHNRLDKANSLFNEAQKRG PVTPKAYQVD
Sbjct: 421 DHALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVD 480

Query: 481 PRYVKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 530
           P+Y+KKPKVKKV KKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRAF
Sbjct: 481 PKYMKKPKVKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 522

[Close]

BLAST of Lcy03g015940 vs. ExPASy TrEMBL
Match: A0A6J1C4U6 (pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111007404 PE=4 SV=1)

HSP 1 Score: 933.3 bits (2411), Expect = 4.4e-268
Identity = 474/529 (89.60%), Postives = 493/529 (93.19%), Query Frame = 0


Query: 1   MPPLPYLHLRRLFIRSLSSFSSLSACSSSSSLNEATRSVLLHRNLTSLCHHFRHHGPALR 60
           M PL YL+LRR FIRSLSS SSLSACSSSSS NE TRSVLLHRNLTS  HHF H+G ALR
Sbjct: 1   MTPLLYLYLRRHFIRSLSSSSSLSACSSSSSFNERTRSVLLHRNLTSPFHHFGHNGAALR 60

Query: 61  FSHLSQLSLSHSFFSESGENDVDQTSQSLASELLKDPDLDPLPITNRLQLSFSHVKPYPE 120
           F+ LSQLS+SHSF SESG +  DQTSQSLASELLKD D DPLPIT RL+LSFSHVKP PE
Sbjct: 61  FNSLSQLSISHSFSSESGHS--DQTSQSLASELLKDADSDPLPITKRLELSFSHVKPNPE 120

Query: 121 LVLKTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGL 180
           LVL TLNLSSEAGRTVLGFNEWLVSNPDFHHTD+TISYFVDYFGRRKDFN+IHEVL KG 
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDDTISYFVDYFGRRKDFNAIHEVLVKGY 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGYASHA 240
           G+SGAKTLRS+IDR  RAGRPTK +SFFE MEK+YGFKRDKESLRMVVEKLCENG ASHA
Sbjct: 181 GVSGAKTLRSSIDRLVRAGRPTKAVSFFEKMEKDYGFKRDKESLRMVVEKLCENGCASHA 240

Query: 241 EKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EK+VKDLANEFFPDEA+CD LIKGWCVD KLDEAKRLAGEMYRGGFELGT AYNALLDCV
Sbjct: 241 EKMVKDLANEFFPDEAMCDVLIKGWCVDGKLDEAKRLAGEMYRGGFELGTMAYNALLDCV 300

Query: 301 CKLCRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDAVNLFHRMGE 360
           CK+CRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKT+DAVNLF RMGE
Sbjct: 301 CKICRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTSDAVNLFRRMGE 360

Query: 361 WGCLPNAETFLLLIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI 420
           WGCLPNAETFL+LI+SLYQAART EGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI
Sbjct: 361 WGCLPNAETFLILIRSLYQAARTAEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGGPVTPKAYQVD 480
           DHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQ+ G PV PKAYQVD
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQRTGVPVAPKAYQVD 480

Query: 481 PRYVKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 530
           PRYVKKPKVKK EKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF
Sbjct: 481 PRYVKKPKVKKAEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 527

[Close]

BLAST of Lcy03g015940 vs. ExPASy TrEMBL
Match: A0A1S3BVC3 (pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494058 PE=4 SV=1)

HSP 1 Score: 933.3 bits (2411), Expect = 4.4e-268
Identity = 470/529 (88.85%), Postives = 492/529 (93.01%), Query Frame = 0


Query: 1   MPPLPYLHLRRLFIRSLSSFSSLSACSSSSSLNEATRSVLLHRNLTSLCHHFRHHGPALR 60
           MPPLPYL LR LF+RSLSS       SS++SLN++ R+VLLHRNLTSL HHFRHHG ALR
Sbjct: 1   MPPLPYLQLRSLFLRSLSS-------SSTNSLNDSARTVLLHRNLTSLFHHFRHHGAALR 60

Query: 61  FSHLSQLSLSHSFFSESGENDVDQTSQSLASELLKDPDLDPLPITNRLQLSFSHVKPYPE 120
           FS    LSLSHSF SESG NDVDQTSQSLASELLKDPD DPLPIT RLQLSFSHVKP PE
Sbjct: 61  FSSPLYLSLSHSFSSESGNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPE 120

Query: 121 LVLKTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGL 180
           LV  TLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFN++HEVLAKGL
Sbjct: 121 LVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGL 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGYASHA 240
           GI+G KTL S+I RFARAGRPTKLISFFETMEKNYG KRDK+SLRMVVEKL ENG+ SHA
Sbjct: 181 GINGPKTLESSIHRFARAGRPTKLISFFETMEKNYGLKRDKKSLRMVVEKLSENGFGSHA 240

Query: 241 EKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EK+VKDLANEFFPDEAICDTLIKGWCV+EKLDEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDAVNLFHRMGE 360
           CKLCRKKDPFRL SEAEEILVEMD RGVPRNVETFNVLINNLCKIR+TTDAVNLFHRMGE
Sbjct: 301 CKLCRKKDPFRLHSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGE 360

Query: 361 WGCLPNAETFLLLIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI 420
           WGC PNAETFL+LI+SLYQAARTGEGDEMIDRM+S GYGDALDKKAYYEF+KILCGIERI
Sbjct: 361 WGCHPNAETFLILIRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMKILCGIERI 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGGPVTPKAYQVD 480
           DHAL+VFAKMKKDGCEPGIKTYDLLMGK CAHNRLDKANSLFNEAQKRG PVTPKAYQVD
Sbjct: 421 DHALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVD 480

Query: 481 PRYVKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 530
           P+Y+KKPKVKKV KKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRAF
Sbjct: 481 PKYMKKPKVKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 522

[Close]

BLAST of Lcy03g015940 vs. NCBI nr
Match: XP_022966044.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita maxima] >XP_022966052.1 pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 967.6 bits (2500), Expect = 4.3e-278
Identity = 486/529 (91.87%), Postives = 506/529 (95.65%), Query Frame = 0


Query: 1   MPPLPYLHLRRLFIRSLSSFSSLSACSSSSSLNEATRSVLLHRNLTSLCHHFRHHGPALR 60
           MPPLPYLHLRR FIRSLSS S LSA SSSSSLNEA++SV+L R+LTS+ HHFR  GPAL 
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRRGPALG 60

Query: 61  FSHLSQLSLSHSFFSESGENDVDQTSQSLASELLKDPDLDPLPITNRLQLSFSHVKPYPE 120
            S+LSQLSLSHSFFSESGENDVDQ+SQSLA+ELLKDPDLDPLPIT RLQL FSHVKP PE
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLCFSHVKPNPE 120

Query: 121 LVLKTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGL 180
           L+L TLN SSEAGRTVLGFNEWL+SNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKG 
Sbjct: 121 LILNTLNFSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGYASHA 240
           GISGAKTLRSTIDRFARAGRPTKL+SFFETMEKNYGFKRDKES+RMVVEKLCENGYASHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHA 240

Query: 241 EKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EK+VKDLA+EFFPDEAICDTLIKGWCV+EKLDEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLAHEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDAVNLFHRMGE 360
           CKLCRKKDPF+LQSEAEEILVEMD RGVPRNVETFNVLINNLCKIRKTTDA+NLFHRMGE
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 361 WGCLPNAETFLLLIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI 420
           WGC PNAETFL+LIKSLYQAARTGEGDEMIDRMRSAGY DALDKKAYYEFLKILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGGPVTPKAYQVD 480
           DHALIVFAKMKKDGCEPGIKTYDLLMGK CAHNRLD+ANSLFNEAQKRG PVTPKAYQV+
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 481 PRYVKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 530
           PRY KKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRAF
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529

[Close]

BLAST of Lcy03g015940 vs. NCBI nr
Match: XP_023531133.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 967.2 bits (2499), Expect = 5.7e-278
Identity = 486/529 (91.87%), Postives = 506/529 (95.65%), Query Frame = 0


Query: 1   MPPLPYLHLRRLFIRSLSSFSSLSACSSSSSLNEATRSVLLHRNLTSLCHHFRHHGPALR 60
           MPPLPYLHLRR FIRSLSS S LSA SSSSSLNEA++SV+L R+LTS+ HHFR  GPAL 
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG 60

Query: 61  FSHLSQLSLSHSFFSESGENDVDQTSQSLASELLKDPDLDPLPITNRLQLSFSHVKPYPE 120
            S+LSQLSLSHSFFSESGENDVDQ+SQSLA+ELLKDPDLDPLPIT RLQLSFSHVKP PE
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLSFSHVKPNPE 120

Query: 121 LVLKTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGL 180
           LVL TLNLSSEAGRTVLGFNEWL+SNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKG 
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGYASHA 240
           GISGAKTLRSTIDRFARAGRPTKL+SFFETMEKNYGFKRDKES+R+VVEKLCENGYASHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRIVVEKLCENGYASHA 240

Query: 241 EKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EK+VKDLA+EFFPDEAICD LI+GWCVDEK DEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLAHEFFPDEAICDALIRGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDAVNLFHRMGE 360
           CKLCRKKDPF+LQSEAEEILVEMD RGVPRNVETFNVLINNLCKIRKTTDA+NLFHRMGE
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 361 WGCLPNAETFLLLIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI 420
           WGC PNAETFL+LIKSLYQAARTGEGDEMIDRMRSAGY DALDKKAYYEFLKILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGGPVTPKAYQVD 480
           DHALIVFAKMKKDGCEPGIKTYDLLMGK CAHNRLD+ANSLFNEAQKRG PVTPKAYQV+
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 481 PRYVKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 530
           PRY KKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRAF
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKTMRRAF 529

[Close]

BLAST of Lcy03g015940 vs. NCBI nr
Match: XP_022933386.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita moschata] >KAG6587594.1 Pentatricopeptide repeat-containing protein PNM1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021560.1 Pentatricopeptide repeat-containing protein PNM1, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 966.5 bits (2497), Expect = 9.6e-278
Identity = 486/529 (91.87%), Postives = 505/529 (95.46%), Query Frame = 0


Query: 1   MPPLPYLHLRRLFIRSLSSFSSLSACSSSSSLNEATRSVLLHRNLTSLCHHFRHHGPALR 60
           MPPLPYLHLRR FIRSLSS S LSA SSSSSLNEA++SV+L R+LTS+ HHFR  GPAL 
Sbjct: 1   MPPLPYLHLRRFFIRSLSSSSYLSASSSSSSLNEASKSVVLRRDLTSVFHHFRRQGPALG 60

Query: 61  FSHLSQLSLSHSFFSESGENDVDQTSQSLASELLKDPDLDPLPITNRLQLSFSHVKPYPE 120
            S+LSQLSLSHSFFSESGENDVDQ+SQSLA+ELLKDPDLDPLPIT RLQL FSHVKP PE
Sbjct: 61  CSYLSQLSLSHSFFSESGENDVDQSSQSLAAELLKDPDLDPLPITKRLQLIFSHVKPNPE 120

Query: 121 LVLKTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGL 180
           LVL TLNLSSEAGRTVLGFNEWL+SNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKG 
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLISNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGS 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGYASHA 240
           GISGAKTLRSTIDRFARAGRPTKL+SFFETMEKNYGFKRDKES+RMVVEKLCENGYASHA
Sbjct: 181 GISGAKTLRSTIDRFARAGRPTKLLSFFETMEKNYGFKRDKESIRMVVEKLCENGYASHA 240

Query: 241 EKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EK+VKDLA+EFFPDEAICD LIKGWCVDEK DEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLAHEFFPDEAICDALIKGWCVDEKFDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDAVNLFHRMGE 360
           CKLCRKKDPF+LQSEAEEILVEMD RGVPRNVETFNVLINNLCKIRKTTDA+NLFHRMGE
Sbjct: 301 CKLCRKKDPFKLQSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRKTTDALNLFHRMGE 360

Query: 361 WGCLPNAETFLLLIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI 420
           WGC PNAETFL+LIKSLYQAARTGEGDEMIDRMRSAGY DALDKKAYYEFLKILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYADALDKKAYYEFLKILCGIERI 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGGPVTPKAYQVD 480
           DHALIVFAKMKKDGCEPGIKTYDLLMGK CAHNRLD+ANSLFNEAQKRG PVTPKAYQV+
Sbjct: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDRANSLFNEAQKRGVPVTPKAYQVE 480

Query: 481 PRYVKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 530
           PRY KKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPK+ MRRAF
Sbjct: 481 PRYAKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKRTMRRAF 529

[Close]

BLAST of Lcy03g015940 vs. NCBI nr
Match: XP_038880042.1 (pentatricopeptide repeat-containing protein PNM1, mitochondrial [Benincasa hispida])

HSP 1 Score: 957.2 bits (2473), Expect = 5.8e-275
Identity = 482/529 (91.12%), Postives = 500/529 (94.52%), Query Frame = 0


Query: 1   MPPLPYLHLRRLFIRSLSSFSSLSACSSSSSLNEATRSVLLHRNLTSLCHHFRHHGPALR 60
           MPPLPYL LR LFIRSLSS        SS+SLN+ +R+VLLHRNLTSL HHFRHH  ALR
Sbjct: 1   MPPLPYLQLRTLFIRSLSS-------PSSTSLNDCSRNVLLHRNLTSLFHHFRHHEAALR 60

Query: 61  FSHLSQLSLSHSFFSESGENDVDQTSQSLASELLKDPDLDPLPITNRLQLSFSHVKPYPE 120
           +S    LSLSHSFFSESG+ND+DQTSQSLASELLKDPDLDPLPIT RLQLSFSHVKP PE
Sbjct: 61  YSSPLYLSLSHSFFSESGDNDLDQTSQSLASELLKDPDLDPLPITQRLQLSFSHVKPNPE 120

Query: 121 LVLKTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGL 180
           LVL TLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYF+DYFGRRKDFN++HEVLAKGL
Sbjct: 121 LVLNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFIDYFGRRKDFNAVHEVLAKGL 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGYASHA 240
           GISGAKTLRS+IDRFARAGR TKLISFFETMEKNYG KRDKESLR+VVEKLCENG+ASHA
Sbjct: 181 GISGAKTLRSSIDRFARAGRSTKLISFFETMEKNYGLKRDKESLRLVVEKLCENGFASHA 240

Query: 241 EKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EK+VKDLANEFFPDEAICDTL+KGWCVD KLDEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLANEFFPDEAICDTLVKGWCVDGKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDAVNLFHRMGE 360
           CKLCRKKDPFRL SEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKT+DAVNLFHRMGE
Sbjct: 301 CKLCRKKDPFRLHSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTSDAVNLFHRMGE 360

Query: 361 WGCLPNAETFLLLIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI 420
           WGC PNAETFL+LIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI
Sbjct: 361 WGCHPNAETFLILIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGGPVTPKAYQVD 480
           DHAL+VFAKMKKDGCEPGIKTYDLLMGK CAHNRLDKANSLFNEAQKRG PVTPKAYQVD
Sbjct: 421 DHALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVD 480

Query: 481 PRYVKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 530
           PRYVKKPKV KVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF
Sbjct: 481 PRYVKKPKVNKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 522

[Close]

BLAST of Lcy03g015940 vs. NCBI nr
Match: XP_008453300.1 (PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Cucumis melo] >KAA0058007.1 pentatricopeptide repeat-containing protein PNM1 [Cucumis melo var. makuwa] >TYJ98230.1 pentatricopeptide repeat-containing protein PNM1 [Cucumis melo var. makuwa])

HSP 1 Score: 933.3 bits (2411), Expect = 9.0e-268
Identity = 470/529 (88.85%), Postives = 492/529 (93.01%), Query Frame = 0


Query: 1   MPPLPYLHLRRLFIRSLSSFSSLSACSSSSSLNEATRSVLLHRNLTSLCHHFRHHGPALR 60
           MPPLPYL LR LF+RSLSS       SS++SLN++ R+VLLHRNLTSL HHFRHHG ALR
Sbjct: 1   MPPLPYLQLRSLFLRSLSS-------SSTNSLNDSARTVLLHRNLTSLFHHFRHHGAALR 60

Query: 61  FSHLSQLSLSHSFFSESGENDVDQTSQSLASELLKDPDLDPLPITNRLQLSFSHVKPYPE 120
           FS    LSLSHSF SESG NDVDQTSQSLASELLKDPD DPLPIT RLQLSFSHVKP PE
Sbjct: 61  FSSPLYLSLSHSFSSESGNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPE 120

Query: 121 LVLKTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGL 180
           LV  TLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFN++HEVLAKGL
Sbjct: 121 LVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGL 180

Query: 181 GISGAKTLRSTIDRFARAGRPTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGYASHA 240
           GI+G KTL S+I RFARAGRPTKLISFFETMEKNYG KRDK+SLRMVVEKL ENG+ SHA
Sbjct: 181 GINGPKTLESSIHRFARAGRPTKLISFFETMEKNYGLKRDKKSLRMVVEKLSENGFGSHA 240

Query: 241 EKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300
           EK+VKDLANEFFPDEAICDTLIKGWCV+EKLDEAKRLAGEMYRGGFELGTTAYNALLDCV
Sbjct: 241 EKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCV 300

Query: 301 CKLCRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDAVNLFHRMGE 360
           CKLCRKKDPFRL SEAEEILVEMD RGVPRNVETFNVLINNLCKIR+TTDAVNLFHRMGE
Sbjct: 301 CKLCRKKDPFRLHSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGE 360

Query: 361 WGCLPNAETFLLLIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERI 420
           WGC PNAETFL+LI+SLYQAARTGEGDEMIDRM+S GYGDALDKKAYYEF+KILCGIERI
Sbjct: 361 WGCHPNAETFLILIRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMKILCGIERI 420

Query: 421 DHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGGPVTPKAYQVD 480
           DHAL+VFAKMKKDGCEPGIKTYDLLMGK CAHNRLDKANSLFNEAQKRG PVTPKAYQVD
Sbjct: 421 DHALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVD 480

Query: 481 PRYVKKPKVKKVEKKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRRAF 530
           P+Y+KKPKVKKV KKRETLPEKMARKRRRLKQIRLSFVKKPKK MRRAF
Sbjct: 481 PKYMKKPKVKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRAF 522

[Close]

BLAST of Lcy03g015940 vs. TAIR 10
Match: AT5G60960.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 621.7 bits (1602), Expect = 5.4e-178
Identity = 324/531 (61.02%), Postives = 398/531 (74.95%), Query Frame = 0


Query: 1   MPP-LPYLHLRRLFIRSLSSFSSLSACSSSSSLNEATRSVLLHRNLTSLCHHFRHHGPAL 60
           MPP LP L LRRL +RS  S SS++   S          ++  + L S     R    + 
Sbjct: 1   MPPSLPSLQLRRLLLRSFISSSSVNTLQSQP-------RIISSKPLFSPLPPSR----SS 60

Query: 61  RFSHLSQLSLSHSFFSESGENDVDQTSQSLASELLKDPDLDPLPITNRLQLSFSHVKPYP 120
            FS       S    +ES   D ++ + S + EL  +PD +   I+ R  LSFSH+ P P
Sbjct: 61  IFSTFPSRFFSSETNAESESLDSNEIALSFSKELTGNPDAESQTISQRFNLSFSHITPNP 120

Query: 121 ELVLKTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKG 180
           +L+L+TLNLS EAGR  LGFNEWL SN +F HTDET+S+FVDYFGRRKDF  + E+++K 
Sbjct: 121 DLILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISKY 180

Query: 181 LGISGAKTLRSTIDRFARAGRPTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGYASH 240
            GI+G KTL S IDR  RAGRP ++  FFE ME +YG KRDKESL +VV+KLCE G+AS 
Sbjct: 181 KGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASI 240

Query: 241 AEKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDC 300
           AEK+VK+ ANE FPDE ICD LI GWC+ EKLDEA RLAGEM RGGFE+GT AYN +LDC
Sbjct: 241 AEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDC 300

Query: 301 VCKLCRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDAVNLFHRMG 360
           VCKLCRKKDPF+LQ E E++L+EM++RGVPRN ETFNVLINNLCKIR+T +A+ LF RMG
Sbjct: 301 VCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMG 360

Query: 361 EWGCLPNAETFLLLIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIER 420
           EWGC P+AET+L+LI+SLYQAAR GEGDEMID+M+SAGYG+ L+KK YY FLKILCGIER
Sbjct: 361 EWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIER 420

Query: 421 IDHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGGPVTPKAYQV 480
           ++HA+ VF  MK +GC+PGIKTYDLLMGK CA+N+L +AN L+ EA K+G  V+PK Y+V
Sbjct: 421 LEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRV 480

Query: 481 DPRYVKKPKVKKVE---KKRETLPEKMARKRRRLKQIRLSFVKKPKKAMRR 528
           DPR++KK K K+V+   KKRETLPEK ARK++RLKQI +SFVKKP   MRR
Sbjct: 481 DPRFMKK-KTKEVDSNVKKRETLPEKTARKKKRLKQINMSFVKKPHNKMRR 519

[Close]

BLAST of Lcy03g015940 vs. TAIR 10
Match: AT5G61370.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 136.0 bits (341), Expect = 9.0e-32
Identity = 108/474 (22.78%), Postives = 218/474 (45.99%), Query Frame = 0


Query: 60  RFSHLSQLSLSHSFFSESGENDVDQTSQSLASELLKDP--DLDPLPITNRLQLSFSHVKP 119
           RF++L+  +    +F      D  +T+      ++  P   LD L   N  Q+S   V P
Sbjct: 10  RFTYLTSTAKLTRYFCSHHLVDRSETALHEVIRIVSSPVGGLDDLE-ENLNQVS---VSP 69

Query: 120 YPELVLKTLN--LSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNSIHEV 179
              LV + +    +  + R +L F  W   +      D+  +Y +     +KD  ++  +
Sbjct: 70  SSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQIL 129

Query: 180 LA---KGLGISGAKTLRSTIDRFARAGRPTKLISFFETMEKNYGFKRDKESLRMVVEKLC 239
           L+   K       +T     +   + G+    I  F+ ++K +   +D  ++  ++  LC
Sbjct: 130 LSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDK-FSCPQDGFTVTAIISALC 189

Query: 240 ENGYASHAEKVVKDLANEFFPDE-AICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTT 299
             G+   A  V+    +    +E ++  +L+ GW V   + EA+R+  +M   G      
Sbjct: 190 SRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLF 249

Query: 300 AYNALLDCVCKLCRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDA 359
            +N+LL C+C+    ++P  L  EA  I++EM    +     ++N+L++ L + R+  ++
Sbjct: 250 CFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRES 309

Query: 360 VNLFHRMGEWGCLPNAETFLLLIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFL 419
             +  +M   GC P+  ++  +++ LY   R G+G++++D M   G+    ++K YY+ +
Sbjct: 310 CQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRP--ERKFYYDLI 369

Query: 420 KILCGIERIDHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRGGP 479
            +LCG+ER++ AL +F KMK+       + YDLL+ K C     +K   L+ EA      
Sbjct: 370 GVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVT 429

Query: 480 VTPKAYQVDPRYVKKPKVKKVEKKRETLPEKMARKR--RRLKQIRLSFVKKPKK 524
           ++     +DP   +  K  K++++   +  +    +   R+ + +     KPK+
Sbjct: 430 LSCSISLLDPSVTEVFKPMKMKEEAAMVDRRALNLKIHARMNKTKPKLKLKPKR 476

[Close]

BLAST of Lcy03g015940 vs. TAIR 10
Match: AT3G49730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 135.2 bits (339), Expect = 1.5e-31
Identity = 94/367 (25.61%), Postives = 161/367 (43.87%), Query Frame = 0


Query: 108 LQLSFSHVKPYPELVLKTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRK 167
           L L+ S +   P L+++ L+   +AG     F  W    P + H+ E     V    + +
Sbjct: 86  LALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMR 145

Query: 168 DFNS----IHEVLAKGLGISGAKTLRSTIDRFARAGRPTKLISFFETMEKNYGFKRDKES 227
            F +    I E+      +   +     + RFA A    K +   + M K YG + D+  
Sbjct: 146 QFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPK-YGLEPDEYV 205

Query: 228 LRMVVEKLCENGYASHAEKVVKDLANEFFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYR 287
              +++ LC+NG    A KV +D+  +F P+     +L+ GWC + KL EAK +  +M  
Sbjct: 206 FGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKE 265

Query: 288 GGFELGTTAYNALLDCVCKLCRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLC 347
            G E     +  LL       +  D       A +++ +M  RG   NV  + VLI  LC
Sbjct: 266 AGLEPDIVVFTNLLSGYAHAGKMAD-------AYDLMNDMRKRGFEPNVNCYTVLIQALC 325

Query: 348 KIRKTTD-AVNLFHRMGEWGCLPNAETFLLLIKSLYQAARTGEGDEMIDRMRSAGYGDAL 407
           +  K  D A+ +F  M  +GC  +  T+  LI    +     +G  ++D MR  G   + 
Sbjct: 326 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS- 385

Query: 408 DKKAYYEFLKILCGIERIDHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLF 467
            +  Y + +      E+ +  L +  KMK+ GC P +  Y++++   C    + +A  L+
Sbjct: 386 -QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLW 442

Query: 468 NEAQKRG 470
           NE +  G
Sbjct: 446 NEMEANG 442

[Close]

BLAST of Lcy03g015940 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 120.6 bits (301), Expect = 3.9e-27
Identity = 78/286 (27.27%), Postives = 132/286 (46.15%), Query Frame = 0


Query: 186 KTLRSTIDRFARAGRPTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGYASHAEKVVK 245
           KT  + +  +   G     +   E M + +G      S+ ++V   C+ G    A   ++
Sbjct: 225 KTFTTVMQGYIEEGDLDGALRIREQMVE-FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQ 284

Query: 246 DLANE--FFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKL 305
           +++N+  FFPD+   +TL+ G C    +  A  +   M + G++     YN+++  +CKL
Sbjct: 285 EMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 344

Query: 306 CRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDAVNLFHRMGEWGC 365
              K       EA E+L +M  R    N  T+N LI+ LCK  +  +A  L   +   G 
Sbjct: 345 GEVK-------EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 404

Query: 366 LPNAETFLLLIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIERIDHA 425
           LP+  TF  LI+ L          E+ + MRS G     D+  Y   +  LC   ++D A
Sbjct: 405 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP--DEFTYNMLIDSLCSKGKLDEA 464

Query: 426 LIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRG 470
           L +  +M+  GC   + TY+ L+  FC  N+  +A  +F+E +  G
Sbjct: 465 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500

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BLAST of Lcy03g015940 vs. TAIR 10
Match: AT1G63150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 119.4 bits (298), Expect = 8.8e-27
Identity = 105/411 (25.55%), Postives = 178/411 (43.31%), Query Frame = 0


Query: 72  SFFSESGENDVDQTSQSLAS---ELLKDPDLDPLPITNRLQLSFSHVK--PYPELVLKTL 131
           SFF+  G    +++  S +    E+L++   D + + + + L    VK  P+P +V    
Sbjct: 29  SFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNK 88

Query: 132 NLSSEAG----RTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNSIHEVLAKGLGI 191
            LS+ A       V+   E +       H   T S F++ F RR   +    VLAK + +
Sbjct: 89  LLSAVAKMNKFELVISLGEQM-QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL 148

Query: 192 S---GAKTLRSTIDRFARAGRPTKLISFFETMEKNYGFKRDKESLRMVVEKLCENGYASH 251
                  TL S ++ +  + R +  ++  + M +  G+K D  +   ++  L  +  AS 
Sbjct: 149 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE-MGYKPDTFTFTTLIHGLFLHNKASE 208

Query: 252 AEKVVKDLANE-FFPDEAICDTLIKGWCVDEKLDEAKRLAGEMYRGGFELGTTAYNALLD 311
           A  +V  +      PD     T++ G C    +D A  L  +M     +     +N ++D
Sbjct: 209 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 268

Query: 312 CVCKLCRKKDPFRLQSEAEEILVEMDYRGVPRNVETFNVLINNLCKIRKTTDAVNLFHRM 371
            +CK       +R    A ++  EM+ +G+  NV T+N LIN LC   + +DA  L   M
Sbjct: 269 SLCK-------YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 328

Query: 372 GEWGCLPNAETFLLLIKSLYQAARTGEGDEMIDRMRSAGYGDALDKKAYYEFLKILCGIE 431
            E    PN  TF  LI + ++  +  E +++ + M         D   Y   +   C   
Sbjct: 329 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP--DTITYNLLINGFCMHN 388

Query: 432 RIDHALIVFAKMKKDGCEPGIKTYDLLMGKFCAHNRLDKANSLFNEAQKRG 470
           R+D A  +F  M    C P I+TY+ L+  FC   R++    LF E  +RG
Sbjct: 389 RLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG 428

The following BLAST results are available for this feature:

BLAST of Lcy03g015940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FME4	7.6e-177	61.02	Pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Arabidopsis t...	[more]
Q9FLJ6	1.3e-30	22.78	Pentatricopeptide repeat-containing protein At5g61370, mitochondrial OS=Arabidop...	[more]
P0C8A0	2.2e-30	25.61	Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX...	[more]
Q9LFF1	5.5e-26	27.27	Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop...	[more]
Q9CAM8	1.2e-25	25.55	Pentatricopeptide repeat-containing protein At1g63150 OS=Arabidopsis thaliana OX...	[more]

BLAST of Lcy03g015940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HLZ2	2.1e-278	91.87	pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbit...	[more]
A0A6J1EYW9	4.7e-278	91.87	pentatricopeptide repeat-containing protein PNM1, mitochondrial-like OS=Cucurbit...	[more]
A0A5A7UTF6	4.4e-268	88.85	Pentatricopeptide repeat-containing protein PNM1 OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1C4U6	4.4e-268	89.60	pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Momordica cha...	[more]
A0A1S3BVC3	4.4e-268	88.85	pentatricopeptide repeat-containing protein PNM1, mitochondrial OS=Cucumis melo ...	[more]

BLAST of Lcy03g015940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022966044.1	4.3e-278	91.87	pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita ...	[more]
XP_023531133.1	5.7e-278	91.87	pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita ...	[more]
XP_022933386.1	9.6e-278	91.87	pentatricopeptide repeat-containing protein PNM1, mitochondrial-like [Cucurbita ...	[more]
XP_038880042.1	5.8e-275	91.12	pentatricopeptide repeat-containing protein PNM1, mitochondrial [Benincasa hispi...	[more]
XP_008453300.1	9.0e-268	88.85	PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial [Cucu...	[more]

BLAST of Lcy03g015940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60960.1	5.4e-178	61.02	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G61370.1	9.0e-32	22.78	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G49730.1	1.5e-31	25.61	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53700.1	3.9e-27	27.27	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G63150.1	8.8e-27	25.55	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 421..449 e-value: 1.9E-4 score: 21.5
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 260..285 e-value: 0.73 score: 10.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 331..377 e-value: 2.5E-11 score: 43.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 334..367 e-value: 6.9E-8 score: 30.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 403..437 score: 9.448698
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 331..365 score: 11.706726
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 438..472 score: 8.747175
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 254..288 score: 9.097937
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 306..397 e-value: 3.0E-14 score: 55.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 398..525 e-value: 4.1E-12 score: 48.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 152..305 e-value: 2.0E-19 score: 71.6
None	No IPR available	PANTHER	PTHR47932:SF13	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PNM1, MITOCHONDRIAL	coord: 49..528
None	No IPR available	PANTHER	PTHR47932	ATPASE EXPRESSION PROTEIN 3	coord: 49..528

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g015940.1	Lcy03g015940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding