Lcy03g015890 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g015890
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	transcription factor TCP5-like
Location	Chr03: 49813899 .. 49815710 (+)
RNA-Seq Expression	Lcy03g015890
Synteny	Lcy03g015890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAACCCTTTTTGATTTTTTGGTGAACAGTTTGGCCAACAACAACAACTGATTTCTGGTTAGCTTCAACCTTGAGTTTGGGAATTTCCTAATGTAAGTTCAATATCATTCCCTTCCAACACAAAATTGGATTTTGTTTTAGATTATTATTGTCTTACATAATTTCTTGAATTTTTCTTGAGAATTTCCCATGATGGATCTGAGAGCTATGATTACTCATTCTATTCTTTAGAAAAAGCTTCCAAAGAAAAGAACCCATTTGGAGAATATCACTCAAAATTGAAACTTTTTTTTTTTCTTCCCAGTTGTAATCATTTCTAATTTTCATCTTACACCCTTGATCTCCCACAAAATTCCAAAAAAAAAAAAAAAACAATGAAGAGATCATAAGATTTAAGGATGTTGAGAAGAAATTCAAAAGAAAAGATTTGTGAAGCAAAAGAAGAAGGAACAATCAGTGATGGAAAATACAGCTTCCCAAAGGCTCCACCAACAAGTTCTAGACAATGGTCAGGATTTAGAAATCCAAGAATTGTTAGAGTTTCTCGTTCATTTGGAGGCAAAGATAGGCACAGCAAAGTTTGTACCATTAGGGGTTTGAGAGATAGAAGGATAAGACTTTCAGTTCCAACAGCCATTCAACTCTATGATCTTCAAGACAAGCTCAGACTTGGCCAGCCTAGCAAGGTCATAGATTGGCTTCTCGACGTCACGAAACTCGACATCGACAAGCTCCCGCCGCTCCAGATCCCAACCGGCTTCTCTCAGTTTCACCAGCAGCTGCTCTTCCCTCAATATGATCATCATCATCATCATTATTCTACTACTTCTTCTTCTTCTTCGCAATTTTGTTCGCTCCCTCCTCCTTTTGCCCTCGACATGAAGGATTCTTTGACGACGCATATCCGAGACGTCGAGAATCAAACACCGACGGAGAGAACAAAGCTTTGGGATGTCGATTTAGCCGCAATGAGAGCGACCGCGACGACACTACAAGAAAAGGCATCTTCAGCGACGAAAGGGAAGTGGATTGATGGGAGTGATAATCAACAAGTTGAAGATTACAATGAGCAAATTTCAGCTCAAAAGCTCTTGTCAATGGCCAGTAATCGTTCTTCTTTACCTAACATGATGAACAATAATAATTCTAATGCTTACAATTACAACACTTCTTCTGATCAGCTTTCTTCATGTTTATCACTTTCACAATTTGGCAACAATGGATCAGTTTTTCCATCACAAATTGAAGCTCAGTCAAGTTCATCTTCTGGTTCTGCACTTTTCTTCACTCCCTATGCTTCATACATCACCAACCCATTTGAAAGCCATATCCATTTCTTGAGCTCAAATTCTCATGCTTTGTCCAATCCCTTCATGCCTTCACCTCTCCAGCCTTTTGGCTCACAAAACTTGAAACCCTTTCCTCCAAACTTCAATCTCAAGCAGCTTCTTCATAACGACAACGGTAGCGGCGGCTCCGGTAAAGACGGGGCGGCTGGTAACTCATAGAACGGTCGTGGAAGATAGGGACAAAGCAAAGAAGAAAGAAGGGAGAGACAATTGTCCCTAGTTCATCCTTAGATGAATAGAATTATATAGAAGAAAGTTAAGATTTTAAAGTTTTCTCTCTAATTTTTCCTTCTGATTGTAGACGATCACGAGTTATATTCGGTTAGACATGAAATGTAATATGAATGGGGTCCTTGTGGATTCTTCAAAATTCTAAGTTTGGATGCAAACTCTTTTGAAGGGTGTGATTTGGAACTGAACTTCTTCAGAAGAGCTTGTAGAAAAGTGAACTTGTTTTGAA

mRNA sequence

AAAAAAACCCTTTTTGATTTTTTGGTGAACAGTTTGGCCAACAACAACAACTGATTTCTGGTTAGCTTCAACCTTGAGTTTGGGAATTTCCTAATGTAAGTTCAATATCATTCCCTTCCAACACAAAATTGGATTTTGTTTTAGATTATTATTGTCTTACATAATTTCTTGAATTTTTCTTGAGAATTTCCCATGATGGATCTGAGAGCTATGATTACTCATTCTATTCTTTAGAAAAAGCTTCCAAAGAAAAGAACCCATTTGGAGAATATCACTCAAAATTGAAACTTTTTTTTTTTCTTCCCAGTTGTAATCATTTCTAATTTTCATCTTACACCCTTGATCTCCCACAAAATTCCAAAAAAAAAAAAAAAACAATGAAGAGATCATAAGATTTAAGGATGTTGAGAAGAAATTCAAAAGAAAAGATTTGTGAAGCAAAAGAAGAAGGAACAATCAGTGATGGAAAATACAGCTTCCCAAAGGCTCCACCAACAAGTTCTAGACAATGGTCAGGATTTAGAAATCCAAGAATTGTTAGAGTTTCTCGTTCATTTGGAGGCAAAGATAGGCACAGCAAAGTTTGTACCATTAGGGGTTTGAGAGATAGAAGGATAAGACTTTCAGTTCCAACAGCCATTCAACTCTATGATCTTCAAGACAAGCTCAGACTTGGCCAGCCTAGCAAGGTCATAGATTGGCTTCTCGACGTCACGAAACTCGACATCGACAAGCTCCCGCCGCTCCAGATCCCAACCGGCTTCTCTCAGTTTCACCAGCAGCTGCTCTTCCCTCAATATGATCATCATCATCATCATTATTCTACTACTTCTTCTTCTTCTTCGCAATTTTGTTCGCTCCCTCCTCCTTTTGCCCTCGACATGAAGGATTCTTTGACGACGCATATCCGAGACGTCGAGAATCAAACACCGACGGAGAGAACAAAGCTTTGGGATGTCGATTTAGCCGCAATGAGAGCGACCGCGACGACACTACAAGAAAAGGCATCTTCAGCGACGAAAGGGAAGTGGATTGATGGGAGTGATAATCAACAAGTTGAAGATTACAATGAGCAAATTTCAGCTCAAAAGCTCTTGTCAATGGCCAGTAATCGTTCTTCTTTACCTAACATGATGAACAATAATAATTCTAATGCTTACAATTACAACACTTCTTCTGATCAGCTTTCTTCATGTTTATCACTTTCACAATTTGGCAACAATGGATCAGTTTTTCCATCACAAATTGAAGCTCAGTCAAGTTCATCTTCTGGTTCTGCACTTTTCTTCACTCCCTATGCTTCATACATCACCAACCCATTTGAAAGCCATATCCATTTCTTGAGCTCAAATTCTCATGCTTTGTCCAATCCCTTCATGCCTTCACCTCTCCAGCCTTTTGGCTCACAAAACTTGAAACCCTTTCCTCCAAACTTCAATCTCAAGCAGCTTCTTCATAACGACAACGGTAGCGGCGGCTCCGGTAAAGACGGGGCGGCTGGTAACTCATAGAACGGTCGTGGAAGATAGGGACAAAGCAAAGAAGAAAGAAGGGAGAGACAATTGTCCCTAGTTCATCCTTAGATGAATAGAATTATATAGAAGAAAGTTAAGATTTTAAAGTTTTCTCTCTAATTTTTCCTTCTGATTGTAGACGATCACGAGTTATATTCGGTTAGACATGAAATGTAATATGAATGGGGTCCTTGTGGATTCTTCAAAATTCTAAGTTTGGATGCAAACTCTTTTGAAGGGTGTGATTTGGAACTGAACTTCTTCAGAAGAGCTTGTAGAAAAGTGAACTTGTTTTGAA

Coding sequence (CDS)

ATGTTGAGAAGAAATTCAAAAGAAAAGATTTGTGAAGCAAAAGAAGAAGGAACAATCAGTGATGGAAAATACAGCTTCCCAAAGGCTCCACCAACAAGTTCTAGACAATGGTCAGGATTTAGAAATCCAAGAATTGTTAGAGTTTCTCGTTCATTTGGAGGCAAAGATAGGCACAGCAAAGTTTGTACCATTAGGGGTTTGAGAGATAGAAGGATAAGACTTTCAGTTCCAACAGCCATTCAACTCTATGATCTTCAAGACAAGCTCAGACTTGGCCAGCCTAGCAAGGTCATAGATTGGCTTCTCGACGTCACGAAACTCGACATCGACAAGCTCCCGCCGCTCCAGATCCCAACCGGCTTCTCTCAGTTTCACCAGCAGCTGCTCTTCCCTCAATATGATCATCATCATCATCATTATTCTACTACTTCTTCTTCTTCTTCGCAATTTTGTTCGCTCCCTCCTCCTTTTGCCCTCGACATGAAGGATTCTTTGACGACGCATATCCGAGACGTCGAGAATCAAACACCGACGGAGAGAACAAAGCTTTGGGATGTCGATTTAGCCGCAATGAGAGCGACCGCGACGACACTACAAGAAAAGGCATCTTCAGCGACGAAAGGGAAGTGGATTGATGGGAGTGATAATCAACAAGTTGAAGATTACAATGAGCAAATTTCAGCTCAAAAGCTCTTGTCAATGGCCAGTAATCGTTCTTCTTTACCTAACATGATGAACAATAATAATTCTAATGCTTACAATTACAACACTTCTTCTGATCAGCTTTCTTCATGTTTATCACTTTCACAATTTGGCAACAATGGATCAGTTTTTCCATCACAAATTGAAGCTCAGTCAAGTTCATCTTCTGGTTCTGCACTTTTCTTCACTCCCTATGCTTCATACATCACCAACCCATTTGAAAGCCATATCCATTTCTTGAGCTCAAATTCTCATGCTTTGTCCAATCCCTTCATGCCTTCACCTCTCCAGCCTTTTGGCTCACAAAACTTGAAACCCTTTCCTCCAAACTTCAATCTCAAGCAGCTTCTTCATAACGACAACGGTAGCGGCGGCTCCGGTAAAGACGGGGCGGCTGGTAACTCATAG

Protein sequence

MLRRNSKEKICEAKEEGTISDGKYSFPKAPPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLRLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSQFHQQLLFPQYDHHHHHYSTTSSSSSQFCSLPPPFALDMKDSLTTHIRDVENQTPTERTKLWDVDLAAMRATATTLQEKASSATKGKWIDGSDNQQVEDYNEQISAQKLLSMASNRSSLPNMMNNNNSNAYNYNTSSDQLSSCLSLSQFGNNGSVFPSQIEAQSSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALSNPFMPSPLQPFGSQNLKPFPPNFNLKQLLHNDNGSGGSGKDGAAGNS

Homology

[Close]

BLAST of Lcy03g015890 vs. ExPASy Swiss-Prot
Match: Q9FME3 (Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.3e-42
Identity = 130/306 (42.48%), Postives = 165/306 (53.92%), Query Frame = 0


Query: 32  TSSRQW-SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLR 91
           +SSRQW S FRNPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQD+L 
Sbjct: 40  SSSRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLG 99

Query: 92  LGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSQFHQQLLFPQYDHHHHHYSTTSSSSSQF 151
           L QPSKVIDWLL+  K D+DKLPPLQ P GF+Q +  L+F          STTS++    
Sbjct: 100 LSQPSKVIDWLLEAAKDDVDKLPPLQFPHGFNQMYPNLIFGNSGFGESPSSTTSTTFP-- 159

Query: 152 CSLPPPFALDMKDSLTTHIRDVENQTPTERTKLWDVD----LAAMRATATTLQEKASSAT 211
                           T++  +EN         WD+       A     TT Q ++    
Sbjct: 160 ---------------GTNLGFLEN---------WDLGGSSRTRARLTDTTTTQRESFDLD 219

Query: 212 KGKWI--DGSDNQQVEDYNEQISAQKLLSMASNRSSLPNMMNNNNSNAYNYNTSSDQLSS 271
           KGKWI  D + NQ  + +N            +++   P     NN++AY YN    Q   
Sbjct: 220 KGKWIKNDENSNQDHQGFN-----------TNHQQQFPLTNPYNNTSAY-YNLGHLQ--- 279

Query: 272 CLSLSQFGNNGSVFPSQIEA-----------QSSSSSGSALFFTPYASYITNPFESHIHF 320
             SL Q GNN +V  S + A            SS+  GS LFF P    +++ F ++  F
Sbjct: 280 -QSLDQSGNNVTVAISNVAANNNNNLNLHPPSSSAGDGSQLFFGPTPPAMSSLFPTYPSF 303

[Close]

BLAST of Lcy03g015890 vs. ExPASy Swiss-Prot
Match: Q9S7W5 (Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.6e-32
Identity = 77/133 (57.89%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 3   RRNSKEKICEAKEEGTISDGKYSFPKAP---PTSSRQWSGFRNPRIVRVSRSFGGKDRHS 62
           RR  + K  + + E   + GK    K P    +SS  W   ++PRIVRVSR+FGGKDRHS
Sbjct: 20  RREREVKEDQEETEVRATSGKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHS 79

Query: 63  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLRLGQPSKVIDWLLDVTKLDIDKLPPLQI-P 122
           KVCT+RGLRDRR+RLSVPTAIQLYDLQ++L + QPSK +DWLLD  K +ID+LPPL I P
Sbjct: 80  KVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISP 139

Query: 123 TGFSQF--HQQLL 130
             FS F  HQ  L
Sbjct: 140 ENFSIFNHHQSFL 152

[Close]

BLAST of Lcy03g015890 vs. ExPASy Swiss-Prot
Match: Q9LEZ9 (Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.7e-32
Identity = 67/89 (75.28%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 40  FRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLRLGQPSKVID 99
           + NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L L QPSKVID
Sbjct: 19  WNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVID 78

Query: 100 WLLDVTKLDIDKLPPLQIPTGFSQFHQQL 129
           WLL+V K D+D LPPLQ P GF Q +  L
Sbjct: 79  WLLEVAKNDVDLLPPLQFPPGFHQLNPNL 107

[Close]

BLAST of Lcy03g015890 vs. ExPASy Swiss-Prot
Match: Q9C758 (Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 6.6e-18
Identity = 97/286 (33.92%), Postives = 133/286 (46.50%), Query Frame = 0


Query: 35  RQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLRLGQP 94
           R W+   + RI+RVSR+ GGKDRHSKV T +GLRDRRIRLSV TAIQ YDLQD+L   QP
Sbjct: 32  RNWNN-PSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQP 91

Query: 95  SKVIDWLLDVTKLDIDKLPPLQIPTGFSQFHQQLLFPQYDHHHHHYSTTSSSSSQFCSLP 154
           SK ++WL++     I  LP              LL   +DH   + + T S+ S   S  
Sbjct: 92  SKAVEWLINAASDSITDLP--------------LLNTNFDHLDQNQNQTKSACSSGTSES 151

Query: 155 PPFALDMKDSLTTHIRDVENQTPTERT-KLWDVDLAAMRATATTLQEKA--SSATKGKWI 214
              +L       T IR    +   ERT K  D DL    ++ T L         +   W 
Sbjct: 152 SLLSLS-----RTEIRGKARERARERTAKDRDKDLQNAHSSFTQLLTGGFDQQPSNRNWT 211

Query: 215 DGSD-NQQVEDYNEQISAQKLLSMASNRSSLPNMMNNNNSNAYNYNTSSDQLSSCLSLSQ 274
            GSD    V+      S+Q+ ++   +     N   +++S+A N   SS       S S 
Sbjct: 212 GGSDCFNPVQLQIPNSSSQEPMNHPFSFVPDYNFGISSSSSAINGGYSSRGTLQSNSQSL 271

Query: 275 FGNNGSVFPSQIEAQSSSSSGSALFFTPYASYITN--PFESHIHFL 315
           F NN +    +    SSSSS S +     + ++    P + H H L
Sbjct: 272 FLNNNNNITQRSSISSSSSSSSPMDSQSISFFMATPPPLDHHNHQL 297

[Close]

BLAST of Lcy03g015890 vs. ExPASy Swiss-Prot
Match: A2ZMR9 (Transcription factor PCF8 OS=Oryza sativa subsp. indica OX=39946 GN=PCF8 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.8e-16
Identity = 52/110 (47.27%), Postives = 62/110 (56.36%), Query Frame = 0


Query: 38  SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLRLGQPSKV 97
           + +R  R+ R +   GGKDRHSKV T RGLRDRR+RLSVPTAI  YD+QD+L + QPSK 
Sbjct: 32  AAWRTSRVARAAA--GGKDRHSKVVTSRGLRDRRVRLSVPTAIAFYDIQDRLGVDQPSKA 91

Query: 98  IDWLLDVTKLDIDKLPPLQIPTGFSQFHQQLLFPQYDHHHHHYSTTSSSS 148
           I+WL+      ID LP L               P  D      S TS SS
Sbjct: 92  IEWLIRAAAAAIDALPSLDCSFALPAAASSPPPPAADDAEVSTSETSKSS 139

[Close]

BLAST of Lcy03g015890 vs. ExPASy TrEMBL
Match: A0A6J1C023 (transcription factor TCP5-like OS=Momordica charantia OX=3673 GN=LOC111007241 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.9e-132
Identity = 279/372 (75.00%), Postives = 299/372 (80.38%), Query Frame = 0


Query: 4   RNSKEKICEAKEEGTISDGKYSFPKAPPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 63
           R+SKEK CEAK+EG I DGKYSFP+A PTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT
Sbjct: 3   RDSKEKGCEAKQEGII-DGKYSFPRA-PTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 62

Query: 64  IRGLRDRRIRLSVPTAIQLYDLQDKLRLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSQ 123
           IRGLRDRRIRLSVPTAIQLYDLQDKL+LGQPSKVIDWLLDVTKLDIDKLPPLQIP GFSQ
Sbjct: 63  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPAGFSQ 122

Query: 124 FHQQL-LFP-QYDHHHHHYSTTSSSSSQFCSLPPPFALDMKDSLTTHIRDVENQTPTERT 183
           FH  + LFP QYD+       +SSSSSQFCSLP PFA+D KDS TTH+    NQT  E+T
Sbjct: 123 FHHPMSLFPAQYDY-------SSSSSSQFCSLPHPFAVDTKDSTTTHL----NQTTMEKT 182

Query: 184 KLWDVDLAAMRATATTLQEKASSATKGKWID-GSDNQQVEDYNEQISAQKLLSMASNRSS 243
           KLWD DL          QEKAS ATKGKWID GS++QQVEDYNEQISAQK +S+      
Sbjct: 183 KLWDTDLVP--------QEKASLATKGKWIDHGSNSQQVEDYNEQISAQKFISI------ 242

Query: 244 LPNMMNNNNSNAYNYNTSSDQLSSCLSLSQFGNNGS-VFPSQIEAQSSSSSGSALFFTPY 303
                 NN SN+Y+YNT   Q       SQFGNN + VFPSQ+EAQ+SSSSGSALFFTPY
Sbjct: 243 ------NNYSNSYHYNTCDHQ------HSQFGNNNNGVFPSQVEAQTSSSSGSALFFTPY 302

Query: 304 ASYITNPFESHIHFLSSNSHALSNPFMP--SPLQPFGSQNLKPFPPNFNLKQLLHNDNGS 363
           ASYITNPFESHIHFLSSNSHAL NPFMP  SPLQPFGSQNLKPFP NFNLKQLLH+    
Sbjct: 303 ASYITNPFESHIHFLSSNSHALPNPFMPPNSPLQPFGSQNLKPFPANFNLKQLLHD---- 331

Query: 364 GGSGKDGAAGNS 370
           GGSGKDGA GNS
Sbjct: 363 GGSGKDGADGNS 331

[Close]

BLAST of Lcy03g015890 vs. ExPASy TrEMBL
Match: A0A0A0LRU6 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G014310 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.6e-131
Identity = 291/418 (69.62%), Postives = 321/418 (76.79%), Query Frame = 0


Query: 1   MLRRNSK-EKICEAKEEGTI--------SDGKYSFPKAPPTSSRQWSGFRNPRIVRVSRS 60
           MLR NSK +K CEAKEEG +        +DGKYSFPKAP +SSRQWSGFRNPRIVRVSRS
Sbjct: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60

Query: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLRLGQPSKVIDWLLDVTKLDIDK 120
           FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKL+LGQPSKVIDWLLDVTKLDID 
Sbjct: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120

Query: 121 LPPLQIPTGFSQFHQQLLFPQY-DHHHHHY------STTSSSSSQFC-SLPPPFALDMKD 180
           LPPLQIP GFS FHQQ+LFPQY D HHH+Y      S++SSSSS+FC SLPPPF LD+K 
Sbjct: 121 LPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKS 180

Query: 181 SLTTHIRDVENQTPT-ERTKLWDVDLAAMR---ATATTLQEKASSATKGKWIDGSDN--- 240
           +      D    T T E+TKLWD+DLA ++    +ATT    A++ TKGKWIDGS+N   
Sbjct: 181 T------DAYQTTMTVEKTKLWDMDLAVLQDKAGSATT----AATTTKGKWIDGSNNDSN 240

Query: 241 --QQVEDYNEQISAQKLLSMASNRSSLPNMMNNNNSNAY-NYNTSSD----QLSSCLSLS 300
             QQVEDYNEQIS+QKLLSMA   S+LPNMMNNNNS  Y NYN+S D    Q  SCLSLS
Sbjct: 241 STQQVEDYNEQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLS 300

Query: 301 QFGNNGS---VFPSQI-----EAQSSSSSGSALFFTPYASYITNPFESHIHFLSSNSHAL 360
           QFGNN +   VFPSQ+     +  +SSSS S+LFFTPYASYITNPFESHIHFLSSNSHAL
Sbjct: 301 QFGNNNNSNGVFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHAL 360

Query: 361 SNPFMPSPLQPFG-SQNLKPF-PPNFNLKQLLH-----NDNGSGGSG---KDGAAGNS 370
           SNPFM S L PF  SQNLKPF PP+FNLKQL H     N  GS G+G   KDGAAGNS
Sbjct: 361 SNPFMSSSLHPFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS 408

[Close]

BLAST of Lcy03g015890 vs. ExPASy TrEMBL
Match: A0A1S3BX07 (transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103494051 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 1.2e-126
Identity = 289/417 (69.30%), Postives = 318/417 (76.26%), Query Frame = 0


Query: 1   MLRR-NSK-EKICEAKEEG--------TISDGKYSFPKAPPTSSRQWSGFRNPRIVRVSR 60
           MLR  NSK +K  EAKEEG          +DGKYSFPKAP +SSRQWSGFRNPRIVRVSR
Sbjct: 9   MLRNSNSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 68

Query: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLRLGQPSKVIDWLLDVTKLDID 120
           SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKL+LGQPSKVIDWLLDVTKLDID
Sbjct: 69  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 128

Query: 121 KLPPLQIPTGFSQFHQQLLFPQY-DHHHHHY-STTSSSSSQFC-SLPPPFALDMKDSLTT 180
            LPPLQIP GFS FHQQ+LFPQY D HHH+Y S++SSSSS+FC S PPPF LD+K +   
Sbjct: 129 NLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSRFCNSQPPPFMLDVKST--- 188

Query: 181 HIRDVENQTPT-ERTKLWDVDLAAM---RATATTLQEKASSATKGKWIDGSDN-----QQ 240
              D    T T E+TKLWD+DLA +     +ATT    A++ TKGKWIDGS+N     QQ
Sbjct: 189 ---DAYQTTMTVEKTKLWDMDLAVLPEKAGSATT----AATTTKGKWIDGSNNDSNSTQQ 248

Query: 241 VEDYNEQISAQKLLSMASNRSSLPNMMNNNNSNAY-NYNTSSD-----QLSSCLSLSQFG 300
           VEDYNEQIS+QKLLSMA   S+LPNMMNNNNS  Y NYN+S D     Q  SCLSLSQFG
Sbjct: 249 VEDYNEQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHHHHRQQPSCLSLSQFG 308

Query: 301 NNGS---VFPSQI-----EAQSSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALS-N 360
           NN +   +FPSQ+      + SSSSS S+LFFTPYASYITNPFESHIHFLSSNSHALS N
Sbjct: 309 NNNNSNGIFPSQLVEAAQASTSSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNN 368

Query: 361 PFMPSPLQPFG-SQNLKPF-PPNFNLKQLLH----NDN-----GSGGSGKDGAAGNS 370
           PFM S L PF  SQNLKPF PP+FNLKQL H    N+N     G+G S KDGAAGNS
Sbjct: 369 PFMSSSLHPFATSQNLKPFPPPSFNLKQLFHAADTNNNAGGSAGAGSSAKDGAAGNS 415

[Close]

BLAST of Lcy03g015890 vs. ExPASy TrEMBL
Match: A0A5A7UWW8 (Transcription factor TCP5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003030 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 1.2e-126
Identity = 289/417 (69.30%), Postives = 318/417 (76.26%), Query Frame = 0


Query: 1   MLRR-NSK-EKICEAKEEG--------TISDGKYSFPKAPPTSSRQWSGFRNPRIVRVSR 60
           MLR  NSK +K  EAKEEG          +DGKYSFPKAP +SSRQWSGFRNPRIVRVSR
Sbjct: 1   MLRNSNSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 60

Query: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLRLGQPSKVIDWLLDVTKLDID 120
           SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKL+LGQPSKVIDWLLDVTKLDID
Sbjct: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 120

Query: 121 KLPPLQIPTGFSQFHQQLLFPQY-DHHHHHY-STTSSSSSQFC-SLPPPFALDMKDSLTT 180
            LPPLQIP GFS FHQQ+LFPQY D HHH+Y S++SSSSS+FC S PPPF LD+K +   
Sbjct: 121 NLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSRFCNSQPPPFMLDVKST--- 180

Query: 181 HIRDVENQTPT-ERTKLWDVDLAAM---RATATTLQEKASSATKGKWIDGSDN-----QQ 240
              D    T T E+TKLWD+DLA +     +ATT    A++ TKGKWIDGS+N     QQ
Sbjct: 181 ---DAYQTTMTVEKTKLWDMDLAVLPEKAGSATT----AATTTKGKWIDGSNNDSNSTQQ 240

Query: 241 VEDYNEQISAQKLLSMASNRSSLPNMMNNNNSNAY-NYNTSSD-----QLSSCLSLSQFG 300
           VEDYNEQIS+QKLLSMA   S+LPNMMNNNNS  Y NYN+S D     Q  SCLSLSQFG
Sbjct: 241 VEDYNEQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHHHHRQQPSCLSLSQFG 300

Query: 301 NNGS---VFPSQI-----EAQSSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALS-N 360
           NN +   +FPSQ+      + SSSSS S+LFFTPYASYITNPFESHIHFLSSNSHALS N
Sbjct: 301 NNNNSNGIFPSQLVEAAQASTSSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNN 360

Query: 361 PFMPSPLQPFG-SQNLKPF-PPNFNLKQLLH----NDN-----GSGGSGKDGAAGNS 370
           PFM S L PF  SQNLKPF PP+FNLKQL H    N+N     G+G S KDGAAGNS
Sbjct: 361 PFMSSSLHPFATSQNLKPFPPPSFNLKQLFHAADTNNNAGGSAGAGSSAKDGAAGNS 407

[Close]

BLAST of Lcy03g015890 vs. ExPASy TrEMBL
Match: A0A6J1E797 (transcription factor TCP5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430066 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 3.2e-116
Identity = 254/373 (68.10%), Postives = 272/373 (72.92%), Query Frame = 0


Query: 4   RNSKEKICEAKEEGTISDGKYSFPKAPPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 63
           RNSKEK  E+KEE     GKY FPKA PTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT
Sbjct: 3   RNSKEKGFESKEE-----GKYRFPKA-PTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 62

Query: 64  IRGLRDRRIRLSVPTAIQLYDLQDKLRLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSQ 123
           IRGLRDRRIRLSVPTAIQLYDLQDKL+LGQPSKVIDWL DVTKLDIDKLPPLQIPTGFS 
Sbjct: 63  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSP 122

Query: 124 FHQQLLFPQYDHHHHH--YSTTSSSSSQFC-SLPPPFALDMK-DSLTTHIRDVENQTPTE 183
           FHQQ+LFP YDHHHH+   S++SSSSSQFC SLPPPFA+DMK DS+             E
Sbjct: 123 FHQQMLFPPYDHHHHYSSSSSSSSSSSQFCNSLPPPFAVDMKGDSI-------------E 182

Query: 184 RTKLWDVDLAAMRATATTLQEKASSATKGKWIDGSDNQQVEDYNEQISAQKLLSMASNRS 243
           +TK+WD+DLA        LQ KASS TKGKWIDGS NQ VEDY                 
Sbjct: 183 KTKIWDMDLA--------LQGKASSLTKGKWIDGSSNQHVEDY----------------- 242

Query: 244 SLPNMMNNNNSNAYNYNTSSDQLSSCLSLSQFGNNGSVFPSQIEAQSSSSSGSALFFTPY 303
                      N   YNT +         SQFGNN  VFPSQIEA +SSSS SALFFTPY
Sbjct: 243 -----------NFTPYNTYNS--------SQFGNNNGVFPSQIEAPTSSSSASALFFTPY 302

Query: 304 ASYITNPFESHIHFLSSNSHALSNPFMPSPLQPFGSQNLKPF-PPNFNLKQLLH--NDNG 363
           ASYITNPFESHIHFLSSNSHALSNPF+PS L PF SQNLKPF   +FN KQLLH  + NG
Sbjct: 303 ASYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNG 312

Query: 364 SGGSGKDGAAGNS 370
           +  S KDG AG+S
Sbjct: 363 TDRSNKDGTAGDS 312

[Close]

BLAST of Lcy03g015890 vs. NCBI nr
Match: XP_022135226.1 (transcription factor TCP5-like [Momordica charantia])

HSP 1 Score: 482.3 bits (1240), Expect = 3.8e-132
Identity = 279/372 (75.00%), Postives = 299/372 (80.38%), Query Frame = 0


Query: 4   RNSKEKICEAKEEGTISDGKYSFPKAPPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 63
           R+SKEK CEAK+EG I DGKYSFP+A PTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT
Sbjct: 3   RDSKEKGCEAKQEGII-DGKYSFPRA-PTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCT 62

Query: 64  IRGLRDRRIRLSVPTAIQLYDLQDKLRLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSQ 123
           IRGLRDRRIRLSVPTAIQLYDLQDKL+LGQPSKVIDWLLDVTKLDIDKLPPLQIP GFSQ
Sbjct: 63  IRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPAGFSQ 122

Query: 124 FHQQL-LFP-QYDHHHHHYSTTSSSSSQFCSLPPPFALDMKDSLTTHIRDVENQTPTERT 183
           FH  + LFP QYD+       +SSSSSQFCSLP PFA+D KDS TTH+    NQT  E+T
Sbjct: 123 FHHPMSLFPAQYDY-------SSSSSSQFCSLPHPFAVDTKDSTTTHL----NQTTMEKT 182

Query: 184 KLWDVDLAAMRATATTLQEKASSATKGKWID-GSDNQQVEDYNEQISAQKLLSMASNRSS 243
           KLWD DL          QEKAS ATKGKWID GS++QQVEDYNEQISAQK +S+      
Sbjct: 183 KLWDTDLVP--------QEKASLATKGKWIDHGSNSQQVEDYNEQISAQKFISI------ 242

Query: 244 LPNMMNNNNSNAYNYNTSSDQLSSCLSLSQFGNNGS-VFPSQIEAQSSSSSGSALFFTPY 303
                 NN SN+Y+YNT   Q       SQFGNN + VFPSQ+EAQ+SSSSGSALFFTPY
Sbjct: 243 ------NNYSNSYHYNTCDHQ------HSQFGNNNNGVFPSQVEAQTSSSSGSALFFTPY 302

Query: 304 ASYITNPFESHIHFLSSNSHALSNPFMP--SPLQPFGSQNLKPFPPNFNLKQLLHNDNGS 363
           ASYITNPFESHIHFLSSNSHAL NPFMP  SPLQPFGSQNLKPFP NFNLKQLLH+    
Sbjct: 303 ASYITNPFESHIHFLSSNSHALPNPFMPPNSPLQPFGSQNLKPFPANFNLKQLLHD---- 331

Query: 364 GGSGKDGAAGNS 370
           GGSGKDGA GNS
Sbjct: 363 GGSGKDGADGNS 331

[Close]

BLAST of Lcy03g015890 vs. NCBI nr
Match: XP_011648477.1 (transcription factor TCP5 [Cucumis sativus] >KGN63734.1 hypothetical protein Csa_014083 [Cucumis sativus])

HSP 1 Score: 479.2 bits (1232), Expect = 3.3e-131
Identity = 291/418 (69.62%), Postives = 321/418 (76.79%), Query Frame = 0


Query: 1   MLRRNSK-EKICEAKEEGTI--------SDGKYSFPKAPPTSSRQWSGFRNPRIVRVSRS 60
           MLR NSK +K CEAKEEG +        +DGKYSFPKAP +SSRQWSGFRNPRIVRVSRS
Sbjct: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60

Query: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLRLGQPSKVIDWLLDVTKLDIDK 120
           FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKL+LGQPSKVIDWLLDVTKLDID 
Sbjct: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120

Query: 121 LPPLQIPTGFSQFHQQLLFPQY-DHHHHHY------STTSSSSSQFC-SLPPPFALDMKD 180
           LPPLQIP GFS FHQQ+LFPQY D HHH+Y      S++SSSSS+FC SLPPPF LD+K 
Sbjct: 121 LPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKS 180

Query: 181 SLTTHIRDVENQTPT-ERTKLWDVDLAAMR---ATATTLQEKASSATKGKWIDGSDN--- 240
           +      D    T T E+TKLWD+DLA ++    +ATT    A++ TKGKWIDGS+N   
Sbjct: 181 T------DAYQTTMTVEKTKLWDMDLAVLQDKAGSATT----AATTTKGKWIDGSNNDSN 240

Query: 241 --QQVEDYNEQISAQKLLSMASNRSSLPNMMNNNNSNAY-NYNTSSD----QLSSCLSLS 300
             QQVEDYNEQIS+QKLLSMA   S+LPNMMNNNNS  Y NYN+S D    Q  SCLSLS
Sbjct: 241 STQQVEDYNEQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLS 300

Query: 301 QFGNNGS---VFPSQI-----EAQSSSSSGSALFFTPYASYITNPFESHIHFLSSNSHAL 360
           QFGNN +   VFPSQ+     +  +SSSS S+LFFTPYASYITNPFESHIHFLSSNSHAL
Sbjct: 301 QFGNNNNSNGVFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHAL 360

Query: 361 SNPFMPSPLQPFG-SQNLKPF-PPNFNLKQLLH-----NDNGSGGSG---KDGAAGNS 370
           SNPFM S L PF  SQNLKPF PP+FNLKQL H     N  GS G+G   KDGAAGNS
Sbjct: 361 SNPFMSSSLHPFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS 408

[Close]

BLAST of Lcy03g015890 vs. NCBI nr
Match: KAA0057999.1 (transcription factor TCP5 [Cucumis melo var. makuwa])

HSP 1 Score: 463.0 bits (1190), Expect = 2.4e-126
Identity = 289/417 (69.30%), Postives = 318/417 (76.26%), Query Frame = 0


Query: 1   MLRR-NSK-EKICEAKEEG--------TISDGKYSFPKAPPTSSRQWSGFRNPRIVRVSR 60
           MLR  NSK +K  EAKEEG          +DGKYSFPKAP +SSRQWSGFRNPRIVRVSR
Sbjct: 1   MLRNSNSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 60

Query: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLRLGQPSKVIDWLLDVTKLDID 120
           SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKL+LGQPSKVIDWLLDVTKLDID
Sbjct: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 120

Query: 121 KLPPLQIPTGFSQFHQQLLFPQY-DHHHHHY-STTSSSSSQFC-SLPPPFALDMKDSLTT 180
            LPPLQIP GFS FHQQ+LFPQY D HHH+Y S++SSSSS+FC S PPPF LD+K +   
Sbjct: 121 NLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSRFCNSQPPPFMLDVKST--- 180

Query: 181 HIRDVENQTPT-ERTKLWDVDLAAM---RATATTLQEKASSATKGKWIDGSDN-----QQ 240
              D    T T E+TKLWD+DLA +     +ATT    A++ TKGKWIDGS+N     QQ
Sbjct: 181 ---DAYQTTMTVEKTKLWDMDLAVLPEKAGSATT----AATTTKGKWIDGSNNDSNSTQQ 240

Query: 241 VEDYNEQISAQKLLSMASNRSSLPNMMNNNNSNAY-NYNTSSD-----QLSSCLSLSQFG 300
           VEDYNEQIS+QKLLSMA   S+LPNMMNNNNS  Y NYN+S D     Q  SCLSLSQFG
Sbjct: 241 VEDYNEQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHHHHRQQPSCLSLSQFG 300

Query: 301 NNGS---VFPSQI-----EAQSSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALS-N 360
           NN +   +FPSQ+      + SSSSS S+LFFTPYASYITNPFESHIHFLSSNSHALS N
Sbjct: 301 NNNNSNGIFPSQLVEAAQASTSSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNN 360

Query: 361 PFMPSPLQPFG-SQNLKPF-PPNFNLKQLLH----NDN-----GSGGSGKDGAAGNS 370
           PFM S L PF  SQNLKPF PP+FNLKQL H    N+N     G+G S KDGAAGNS
Sbjct: 361 PFMSSSLHPFATSQNLKPFPPPSFNLKQLFHAADTNNNAGGSAGAGSSAKDGAAGNS 407

[Close]

BLAST of Lcy03g015890 vs. NCBI nr
Match: XP_008453284.1 (PREDICTED: transcription factor TCP5 [Cucumis melo] >XP_008453285.1 PREDICTED: transcription factor TCP5 [Cucumis melo])

HSP 1 Score: 463.0 bits (1190), Expect = 2.4e-126
Identity = 289/417 (69.30%), Postives = 318/417 (76.26%), Query Frame = 0


Query: 1   MLRR-NSK-EKICEAKEEG--------TISDGKYSFPKAPPTSSRQWSGFRNPRIVRVSR 60
           MLR  NSK +K  EAKEEG          +DGKYSFPKAP +SSRQWSGFRNPRIVRVSR
Sbjct: 9   MLRNSNSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 68

Query: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLRLGQPSKVIDWLLDVTKLDID 120
           SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKL+LGQPSKVIDWLLDVTKLDID
Sbjct: 69  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 128

Query: 121 KLPPLQIPTGFSQFHQQLLFPQY-DHHHHHY-STTSSSSSQFC-SLPPPFALDMKDSLTT 180
            LPPLQIP GFS FHQQ+LFPQY D HHH+Y S++SSSSS+FC S PPPF LD+K +   
Sbjct: 129 NLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSRFCNSQPPPFMLDVKST--- 188

Query: 181 HIRDVENQTPT-ERTKLWDVDLAAM---RATATTLQEKASSATKGKWIDGSDN-----QQ 240
              D    T T E+TKLWD+DLA +     +ATT    A++ TKGKWIDGS+N     QQ
Sbjct: 189 ---DAYQTTMTVEKTKLWDMDLAVLPEKAGSATT----AATTTKGKWIDGSNNDSNSTQQ 248

Query: 241 VEDYNEQISAQKLLSMASNRSSLPNMMNNNNSNAY-NYNTSSD-----QLSSCLSLSQFG 300
           VEDYNEQIS+QKLLSMA   S+LPNMMNNNNS  Y NYN+S D     Q  SCLSLSQFG
Sbjct: 249 VEDYNEQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHHHHRQQPSCLSLSQFG 308

Query: 301 NNGS---VFPSQI-----EAQSSSSSGSALFFTPYASYITNPFESHIHFLSSNSHALS-N 360
           NN +   +FPSQ+      + SSSSS S+LFFTPYASYITNPFESHIHFLSSNSHALS N
Sbjct: 309 NNNNSNGIFPSQLVEAAQASTSSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNN 368

Query: 361 PFMPSPLQPFG-SQNLKPF-PPNFNLKQLLH----NDN-----GSGGSGKDGAAGNS 370
           PFM S L PF  SQNLKPF PP+FNLKQL H    N+N     G+G S KDGAAGNS
Sbjct: 369 PFMSSSLHPFATSQNLKPFPPPSFNLKQLFHAADTNNNAGGSAGAGSSAKDGAAGNS 415

[Close]

BLAST of Lcy03g015890 vs. NCBI nr
Match: XP_038879592.1 (transcription factor TCP5-like [Benincasa hispida])

HSP 1 Score: 460.3 bits (1183), Expect = 1.6e-125
Identity = 283/407 (69.53%), Postives = 304/407 (74.69%), Query Frame = 0


Query: 1   MLRRN-SKEKICEAKEEGTIS-----DGKYSFPKAPPTSSRQWSGFRNPRIVRVSRSFGG 60
           MLR N SKEK CEAKEEG  S     DGKYSF KA  TSSRQWSGFRNPRIVRVSRSFGG
Sbjct: 1   MLRNNSSKEKGCEAKEEGIRSSNNNDDGKYSFSKAASTSSRQWSGFRNPRIVRVSRSFGG 60

Query: 61  KDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLRLGQPSKVIDWLLDVTKLDIDKLPP 120
           KDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKL+LGQPSKVIDWLLDVTKLDID LPP
Sbjct: 61  KDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPP 120

Query: 121 LQIPTGFSQFHQQLLFPQYDHHHHHYSTTSSSSSQFCSLPPP-----FALDMKDSLTTHI 180
           LQIP GFS FHQQ+LFPQYD HHH+YST+SSSS    SLPPP     FALD+K      I
Sbjct: 121 LQIPPGFSPFHQQMLFPQYDPHHHYYSTSSSSSRLCNSLPPPPPPPSFALDVKG-----I 180

Query: 181 RDVENQTPTERTKLWDVDLAAMRATATTLQEKASSA----TKGKWIDGS---DNQQVEDY 240
              +     E+TKLWDVDL         LQEKA++A    TKGKWIDGS   ++QQVEDY
Sbjct: 181 DAYQTTMTVEKTKLWDVDLG--------LQEKAAAATTATTKGKWIDGSNTTNSQQVEDY 240

Query: 241 NEQISAQKLLSMASNRSSLPNMMNNNNSNAYNYNTSSDQLSSCLSLSQFGNNGS----VF 300
           NEQIS+QKLLSMA   S+LPNMMNNN++   NYN       SCLSLSQFGNN +     F
Sbjct: 241 NEQISSQKLLSMAICSSNLPNMMNNNSTPYNNYN-------SCLSLSQFGNNNNDDNGNF 300

Query: 301 PSQI-----EAQSSSSSGSALFFTPYASYITNPFESHIHFLSSNSHA-LSNPFMP-SPLQ 360
           PSQ+     +  +SSSS S+LFFTPYASYITNPFESHIHFLSSNSH  LSNPFMP S L 
Sbjct: 301 PSQLVEAAAQTSTSSSSNSSLFFTPYASYITNPFESHIHFLSSNSHVNLSNPFMPNSSLH 360

Query: 361 PFGSQNLKPF-PPNFNLKQLLH-NDNGSGG-------SGKDGAAGNS 370
           PF SQNLKPF PP+FNLKQLLH  DN  GG       S KDGAA NS
Sbjct: 361 PFASQNLKPFPPPSFNLKQLLHAADNNPGGSRAGASSSAKDGAAENS 387

[Close]

BLAST of Lcy03g015890 vs. TAIR 10
Match: AT5G60970.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 )

HSP 1 Score: 175.3 bits (443), Expect = 9.4e-44
Identity = 130/306 (42.48%), Postives = 165/306 (53.92%), Query Frame = 0


Query: 32  TSSRQW-SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLR 91
           +SSRQW S FRNPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQD+L 
Sbjct: 40  SSSRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLG 99

Query: 92  LGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSQFHQQLLFPQYDHHHHHYSTTSSSSSQF 151
           L QPSKVIDWLL+  K D+DKLPPLQ P GF+Q +  L+F          STTS++    
Sbjct: 100 LSQPSKVIDWLLEAAKDDVDKLPPLQFPHGFNQMYPNLIFGNSGFGESPSSTTSTTFP-- 159

Query: 152 CSLPPPFALDMKDSLTTHIRDVENQTPTERTKLWDVD----LAAMRATATTLQEKASSAT 211
                           T++  +EN         WD+       A     TT Q ++    
Sbjct: 160 ---------------GTNLGFLEN---------WDLGGSSRTRARLTDTTTTQRESFDLD 219

Query: 212 KGKWI--DGSDNQQVEDYNEQISAQKLLSMASNRSSLPNMMNNNNSNAYNYNTSSDQLSS 271
           KGKWI  D + NQ  + +N            +++   P     NN++AY YN    Q   
Sbjct: 220 KGKWIKNDENSNQDHQGFN-----------TNHQQQFPLTNPYNNTSAY-YNLGHLQ--- 279

Query: 272 CLSLSQFGNNGSVFPSQIEA-----------QSSSSSGSALFFTPYASYITNPFESHIHF 320
             SL Q GNN +V  S + A            SS+  GS LFF P    +++ F ++  F
Sbjct: 280 -QSLDQSGNNVTVAISNVAANNNNNLNLHPPSSSAGDGSQLFFGPTPPAMSSLFPTYPSF 303

[Close]

BLAST of Lcy03g015890 vs. TAIR 10
Match: AT3G02150.1 (plastid transcription factor 1 )

HSP 1 Score: 140.6 bits (353), Expect = 2.6e-33
Identity = 77/133 (57.89%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 3   RRNSKEKICEAKEEGTISDGKYSFPKAP---PTSSRQWSGFRNPRIVRVSRSFGGKDRHS 62
           RR  + K  + + E   + GK    K P    +SS  W   ++PRIVRVSR+FGGKDRHS
Sbjct: 20  RREREVKEDQEETEVRATSGKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHS 79

Query: 63  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLRLGQPSKVIDWLLDVTKLDIDKLPPLQI-P 122
           KVCT+RGLRDRR+RLSVPTAIQLYDLQ++L + QPSK +DWLLD  K +ID+LPPL I P
Sbjct: 80  KVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISP 139

Query: 123 TGFSQF--HQQLL 130
             FS F  HQ  L
Sbjct: 140 ENFSIFNHHQSFL 152

[Close]

BLAST of Lcy03g015890 vs. TAIR 10
Match: AT3G02150.2 (plastid transcription factor 1 )

HSP 1 Score: 140.6 bits (353), Expect = 2.6e-33
Identity = 77/133 (57.89%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 3   RRNSKEKICEAKEEGTISDGKYSFPKAP---PTSSRQWSGFRNPRIVRVSRSFGGKDRHS 62
           RR  + K  + + E   + GK    K P    +SS  W   ++PRIVRVSR+FGGKDRHS
Sbjct: 20  RREREVKEDQEETEVRATSGKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHS 79

Query: 63  KVCTIRGLRDRRIRLSVPTAIQLYDLQDKLRLGQPSKVIDWLLDVTKLDIDKLPPLQI-P 122
           KVCT+RGLRDRR+RLSVPTAIQLYDLQ++L + QPSK +DWLLD  K +ID+LPPL I P
Sbjct: 80  KVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISP 139

Query: 123 TGFSQF--HQQLL 130
             FS F  HQ  L
Sbjct: 140 ENFSIFNHHQSFL 152

[Close]

BLAST of Lcy03g015890 vs. TAIR 10
Match: AT5G08070.1 (TCP domain protein 17 )

HSP 1 Score: 140.2 bits (352), Expect = 3.3e-33
Identity = 67/89 (75.28%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 40  FRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLRLGQPSKVID 99
           + NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L L QPSKVID
Sbjct: 19  WNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVID 78

Query: 100 WLLDVTKLDIDKLPPLQIPTGFSQFHQQL 129
           WLL+V K D+D LPPLQ P GF Q +  L
Sbjct: 79  WLLEVAKNDVDLLPPLQFPPGFHQLNPNL 107

[Close]

BLAST of Lcy03g015890 vs. TAIR 10
Match: AT1G30210.1 (TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 )

HSP 1 Score: 93.2 bits (230), Expect = 4.7e-19
Identity = 97/286 (33.92%), Postives = 133/286 (46.50%), Query Frame = 0


Query: 35  RQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLRLGQP 94
           R W+   + RI+RVSR+ GGKDRHSKV T +GLRDRRIRLSV TAIQ YDLQD+L   QP
Sbjct: 32  RNWNN-PSSRIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQP 91

Query: 95  SKVIDWLLDVTKLDIDKLPPLQIPTGFSQFHQQLLFPQYDHHHHHYSTTSSSSSQFCSLP 154
           SK ++WL++     I  LP              LL   +DH   + + T S+ S   S  
Sbjct: 92  SKAVEWLINAASDSITDLP--------------LLNTNFDHLDQNQNQTKSACSSGTSES 151

Query: 155 PPFALDMKDSLTTHIRDVENQTPTERT-KLWDVDLAAMRATATTLQEKA--SSATKGKWI 214
              +L       T IR    +   ERT K  D DL    ++ T L         +   W 
Sbjct: 152 SLLSLS-----RTEIRGKARERARERTAKDRDKDLQNAHSSFTQLLTGGFDQQPSNRNWT 211

Query: 215 DGSD-NQQVEDYNEQISAQKLLSMASNRSSLPNMMNNNNSNAYNYNTSSDQLSSCLSLSQ 274
            GSD    V+      S+Q+ ++   +     N   +++S+A N   SS       S S 
Sbjct: 212 GGSDCFNPVQLQIPNSSSQEPMNHPFSFVPDYNFGISSSSSAINGGYSSRGTLQSNSQSL 271

Query: 275 FGNNGSVFPSQIEAQSSSSSGSALFFTPYASYITN--PFESHIHFL 315
           F NN +    +    SSSSS S +     + ++    P + H H L
Sbjct: 272 FLNNNNNITQRSSISSSSSSSSPMDSQSISFFMATPPPLDHHNHQL 297

The following BLAST results are available for this feature:

BLAST of Lcy03g015890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FME3	1.3e-42	42.48	Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1	[more]
Q9S7W5	3.6e-32	57.89	Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1	[more]
Q9LEZ9	4.7e-32	75.28	Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1	[more]
Q9C758	6.6e-18	33.92	Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1	[more]
A2ZMR9	2.8e-16	47.27	Transcription factor PCF8 OS=Oryza sativa subsp. indica OX=39946 GN=PCF8 PE=4 SV...	[more]

BLAST of Lcy03g015890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C023	1.9e-132	75.00	transcription factor TCP5-like OS=Momordica charantia OX=3673 GN=LOC111007241 PE...	[more]
A0A0A0LRU6	1.6e-131	69.62	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G014310 PE=4 SV...	[more]
A0A1S3BX07	1.2e-126	69.30	transcription factor TCP5 OS=Cucumis melo OX=3656 GN=LOC103494051 PE=4 SV=1	[more]
A0A5A7UWW8	1.2e-126	69.30	Transcription factor TCP5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A6J1E797	3.2e-116	68.10	transcription factor TCP5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of Lcy03g015890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135226.1	3.8e-132	75.00	transcription factor TCP5-like [Momordica charantia]	[more]
XP_011648477.1	3.3e-131	69.62	transcription factor TCP5 [Cucumis sativus] >KGN63734.1 hypothetical protein Csa...	[more]
KAA0057999.1	2.4e-126	69.30	transcription factor TCP5 [Cucumis melo var. makuwa]	[more]
XP_008453284.1	2.4e-126	69.30	PREDICTED: transcription factor TCP5 [Cucumis melo] >XP_008453285.1 PREDICTED: t...	[more]
XP_038879592.1	1.6e-125	69.53	transcription factor TCP5-like [Benincasa hispida]	[more]

BLAST of Lcy03g015890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60970.1	9.4e-44	42.48	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5	[more]
AT3G02150.1	2.6e-33	57.89	plastid transcription factor 1	[more]
AT3G02150.2	2.6e-33	57.89	plastid transcription factor 1	[more]
AT5G08070.1	3.3e-33	75.28	TCP domain protein 17	[more]
AT1G30210.1	4.7e-19	33.92	TEOSINTE BRANCHED 1, cycloidea, and PCF family 24	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 54..197 e-value: 9.5E-24 score: 84.7
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 54..112 score: 26.83877
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 344..369
None	No IPR available	PANTHER	PTHR31072:SF168	TRANSCRIPTION FACTOR TCP5	coord: 4..369
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 4..369

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g015890.1	Lcy03g015890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding