Lcy03g014650 (gene) Sponge gourd (P93075) v1

Overview
NameLcy03g014650
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionsuccinate dehydrogenase subunit 7B, mitochondrial-like
LocationChr03: 48745799 .. 48755561 (-)
RNA-Seq ExpressionLcy03g014650
SyntenyLcy03g014650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTTCACCGCATTTCTTGTTTCTTCTCGCATCTCGTACTCAGGAACAATGGCGTTTTTCCTCAACAAAACCACTCTTGCCTCTCATTTCCGATCTCAATCCCAGGTTCTTTCTCCTTCCATCGCCTCTTAGCTTATCTTTTTCTTAATCCTTCTTTCGTTCTCTCTCTCTCAATCTTTTGAGCTTTTTGATTGACCAACAGGTGGATCCTTCATCAATCTCGCGCCGTGGATTCCACGTCGAAACAGGGACTCGTGAAAAGGCTGTAAGCATGTCGAACTTTCTTCTCGTTATTTTCTATCTTTAATTGTTCTTGCAGCGGTTTATTCCGCAGCTCCATTGAGTTAGTTGATATCTTGTAGTTACATGTTAAGTTTTTCTCGTATGGCTGTCTATCTAGTTCGTTTTGCTTTATTGTAATTGAATCTTTCGACGCCGGTAGAGATAGAAGCTTTTCGAAGCTGTTCGGAGAACTCACAATTTATAAGAGGAATGTGTTACTCCACTAATTGCCAATTGGTTTTTGAGATGAAACCTATATTATTTGATATGGTATCAGAGTCCATAAAACTCAAACGGATATTCGGTCCAAGAAAAAAAATTGGGATCCGATCCAAGAATAGGAAACCCAAAAAGGTACCATCTTGAGGAGCATGTTGAGGATCCCACATTGAAAAGATAAGTGGAGAACTCACAATTTATAAGATGAATGGGTTACTCCACTCATTGCCAATTGGTTTTGAGATGGAACCCCATGTTATTTGATATTTAGGTCCATGAAATTAGAGGGGATGGGAGTTGCTGTGTTGTTTTCTTAACTAACCTGTTCCCATGCTAACGGTATGAAACCCTGGTGAAAGGTTTTAAGTTCCTTGTAGTGGGGAAAGTTACGGGTTTGCTTTGCATGTATGTAGTATGTTCTCAAACTCTGCTAGTCTAATTTCCACGGCGATACTTTCTTAAGCACTCTTTTCGAAAATATTTATTCCTTACATTTCATGAAGGACATTTCTCTACTCGTGGATAAGTAAACATGTCTACCAAATTTTTGGTTCGCCTCTTGCATTTGTTTGATGCTGTTGCTAAGTATGTGATTGTATTGATTTATTGCTGCATTGAGTTTTACGATGTTGAATTTCTGGCAGTTATTAGCTGAGGACCCTTCTCTAAGGCGGTTCAGATCACACAAGAAAGGTGTCTCTCGAATCAAAAGAATTGGAGATGTTCTGACAATTGTGGTTGTTGCAGGTACTAGTCTTTTTGCCGTTAAATAAATTCTTCTCTCTTTGTCCAGTGTGGTCCTTGCTCTGCAACATTGATGTAGATGGTGAGTGGTTTGAATCTTTTGAATGATGTATGTCGTTACAAGATTGCCAAATTTTTACGGGCTTCTTAGAGGTGAATTGGCTTTGGCATTTTGAATGGAAACAAGCATGGACTGCAATATGCTTGTTTTTTGGTTGATTTTTGATACTACGTTAGATGAAAAGTAACTTAAGTGAACTTAGATGGAATACTAATGAAATGAAAGAACAGGGTAGCAGCTGTACTATATGGTGTGTTTTTAGCAGTCTCGCCGGGTATCATTGACTGCAAAAGAAGGAACTTGAGATTCAAATGTAGAGAAAAATGGTATTTGGTCAATAAACCCTAATGCTTAGGTGAGGTTAATAGAAATTTGGGAATTACCTTATAAGAATTGTTGTCAATATGTGGATTTTGGAGATGAGATTTCATTTAGTTCTACCGTTCATTCAAACTTGCCATGCTGTTAGCCAAACCTGGTTCGGGTTCCCTAATTTTAGGAAAATGGTACTGTAGATTATTATCAGTGCCTCCTAGACTTTAGTGGCATTATCCTTGAGTTCTATCCACATATGTTAAAGGTGATACAGCTAGCTAACAACAGGTCGATTGAAAGACTAGGTAGCTAGTTTTTCTGTATATTTAAATTGTGCACTAGCTTTTCAACTTTAGTAGCTCGTACGAAATATTTCATTTTACCTTGGCAATATTTAGTCGTAGTAATTGGATCAAGTGATAAGTACAGAGACTAGTGGCTTATTTTCTTCACAATTTTGATACTCAACAAAATATTTGTGTAGAATGATTCTCACTAGTTTTAAGGAATAGTTAAAATTATCTACGACGATCCTTAATTTTTTTTTTTTTTTGATAAGAAACAATTTCATTGATGTATGAAATTTACAAAAGAGGTGATAAGTCAAAGGAGACTACAAAAGGCTATCCCAATTGATAAGAAGGGATGCATATGAATATGAAGCAAATAATTTAGACATTTTACACCAAGATATAGCATAGTAAATGACAAGATCAAAGAACTCTTCAAAGGCGAGCTTGATATCCTTGAAGATGCGATTGTTTCTTTCTCTCCAAAGAACCCAAAAGAAGGCCCTTATAATATGCTTCCAGAGTAAGGCCTTTGCCTCCTTAAAAGGAGGCTCCGCTACAACAATGACGAGAAGGTCTCTAGTGTCTCTAGGAAAGGTCAAATACCAACCAAAACTTTTACAAACACGATTCCAGAACTGTCGAGCAAAAGAACAGTGGATGAATAAGTGATTCTGAGTTTCATCATTCGTCTTGCATAAAGAACACCAACCAGGGGAGATAGCCAAATAGGGCATACGCTTCCAAAGGACATCCTTGGTACTAATAGCTCCATGTGATAATTCCCATTGGAAGAATTTAATCTTCTTGGGATAGTTATCCTTCCAAATACCTTTAGTCAAGGATGACTCTAATAGGCATCTAGAGTCGCTCATATCTGATAGAAGAGATTTCGTAGAGAACTGTCCGCTAGGATGAATGTTCCACCTCCAAGAATCTTCCTCATGAGAGAGGACAATAGGGGCAAGATCGAGGCTAAGGTCAGCCCATTCAATAGCCTCCTCATCCTTCAAATTCCTCCCAAATTTGAGATCCCAAAAGTTGTCTTCTGTATTCCAAACCTCTTTAATCGCCTCCTTTTTGCTTTGTGAAAGTCTGTATAGAAGGGGATACCGAGAGGCCAAAGGAGGGTTGGTGACCCAAGGGTCGGTCCAAAATAGAGTTGATGCTCCATTGCCAACAAGATGGCTAATCCGGCTTGTAACAAGATGTTGGTGCTTAACAATGGACTTCCATGGGCCCTTGGCAGTAGCTAATGATGCCCAATTTAAAAAATTAGATGAGCCATATTTCTCTTTAATAAGAGTCTTCCATAAAGCTTTATTCTCCTGTTTGTATCTCCATATCCATTTTGCCAGGAGAGCTTTATTTTTATCTCTCATAGAATGAATGCCAAGGCCTCCTTGGTCCAAAGGGTGAAAGATATTACTCCATCTAACAAGATGTTGACCTCCCTCTTTTAATCCTCCTTCCCACAAGAAATGTCTGAGTAGTCTTTCCATCTCCTGAGCCACCTTAACTGGAATGAGAAATAGGGAGAGGTAATAAGTCGGGAGGTTAGATAAGGTTGCTTGGAGGAGTGTGAGTCTGCCTCCTTTGGATATGAAAGATGATCCCCAGGAGAAGAGCCTTCTCTCAATCTTCTCAATGATGGGAGTCCAAAAGGATAGGGTTCTAGGAGAACCATTGAGAGGGAGCCCCAAATAATTGTTAGGCCATATGCCCATTTTCAAGCCATATTTATTAGCAACCTCTTCAAGATCAACTGTGGGGACATTAACGATCCTTAATTTTTTGACGTCAAGATAATAGTTTAATTTGTCCGTTGCACTGTATTTTAGCACATTAACCTTAGAGACCATTTGAAAATTAAATCTATTTTTCAAGATCTTAGGGGTTGAAAGACTGCCTTTGAACTTAAAGAATAGATGTGATAATTTCTGTCAAGTGTTCCTTTTTACCCGAAAACATTGCAGTTGCCAAAATGACTGACCCAGTCCAGTTCCACCCCCCCCCCCCTCTTTGTCTTCTATCTCCTTGAGTTTTAGCTACTCCGAAAGGACCTTGCCTAAAAAGTAGAAGAGGAAGAATACTTTTTTCATAAAGGAAAAAACAATTTCCATGCACAAAAAGGATTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGTTGAATCTTGCAATATTCTCCTTGAAGAGAAGAGCCAAACAAAAATTGTCCGTCTGAGCTTTCTTGTCTTTAAAGATTCTTCTCTTCCTTTCTTCCCTTAATTCACAACAAATTTCTGAAACTGGAGTAAGTAGAATGAATATGATCTTGGTTGCCAATGATGCCTCCATATAGCTTGACTTGAGGTAAGCAATACTCAACGTTTCTGCAGAACCCCAATCAGGTTAAAGGTTCTTGGCCACTTGCATCGAAGTGTTTGAGAGACCAAAGTCTAGAGGCCTGATAATCCGTTTTGGGTTTTCTCCAAGAACTCACATTAGGGTTTCATATATAAATGGAATATGTCTTCTTAAGCTGGTCATGAGGGTTGATTCTTCTGCTTCGCAGCAAGAAAATAAGGACGACCTCTGAATTCTATACCATATCCACCAACCATATAGGCAACTCTGCGTTTTCAGAGTTTGATTTGACAATATTATTACATCGATTGAAGTTGATATTACCTTTCAGCCTCCAAATGCGATATTAGCTTTCAGCCTCCAAATGCTAGAGACCTCGTCTCTAGAACATTCACCTCTTTAATTATGTTCAGCATGGATGCAAACTTCACTATGATTCTCTATCATAGAATGAACATTTTAGCCCCGTTTGATAATGATTTCGCTTTTAGTTTTTTGTTTTTGAAAATTGTGATTGTTTCCTTGCCATTTCTTTAATTTGGTTTTCACATTTCTTGAGAACCATTAGAATTCTTTGCCAAATTCCAAAAACAAAACCAAGTTTTTAAGGCTCCGTTCGATAACCATTTTGTTTTTGTTTTTTAGTTTTTGAAAATTAAACTTATAAACACTACTTTTACCCACAAGTTTCTTTGTTTGTTATCTACCTCCTTTCTCATGTTTTAAAAAACTAAGCTAAATTTTGAGGGGAAAAATAGTTTTAAAAAACTTGTTTTTGTTTTTTGAATTTGGCTAGGAACTCAAATGTTTCATTAATGAATATGAAAATAATGGTTAGAAAATTGAGAGAAAACAAGCATAATTTTCAAAAACCCTAAAACCAAAAACGAAATGGTTATCAAACGAGACCTAATTTTTTTTTTTAATTTTTAATTTAATTTAATTTTATTTTCAAAATTTGGCTTGGATTTTGAAAATATATTAAAAGGTAGATTACAGAACAAAGAAACTCGTAATATAGGTGAATTTTCAAAAACCAAATGGTTATCAAACAAAGCTTTAACTGTTAGTTCAGTGAAGCGAGTGAAATCTCCCGATGGCCATATCTTTTGTGCTGTACTGCTGTCACTAAGTTAACTGAGTTTGTACAGGAACATTTGATCTGCCCCACGAACTTTACTTCCACGAGTAGAATGTGGGTAGGGAAGTTAATTTCTTCATTGACCGAAGGGGTAAATTAGAAAACAAAAAATTTTTTGTGCGTCATATTTGCACCAGGCTATGTTATGTGAATTGCTATGAAGCACGGATACGTAAAAATGGCTGGGGAATCTGTGTCGGACACGTGTTGGACACGGATACGTCCGGACACGCGCCGGACACGTGTCGGACACGCAAAAATCCGTGTCCCTTTTTTTTTTTTTTTTTTTTAAAATCGGACACGTGCGGACACGCTCGGATACGCAAATCGGACACGTCTGGCCGTCCAAATGTCTGTTTATGGGAAGAAAAAAAAAGAAGAAAAGAGGAGAAAAAGAATTTGAACCCAATCAGTGTTTTAAAAGGCTCAAGGCGCACTAAGGCGCAATGGCCTCTTGGGGCCTAGGCGCAAGGCGCACAAAAAGGCGCGGGCTTTATTATGTAAGGCGCACTATATAGAAAAAAAATTTACAAAAATATATACATGTATATAAAACACTTTCATGGCAAGTAATGAAGTTTTTAACCAAGAAAAATAGATAAAAGATAAATAAGGTTCAAATATTAGTCTTCCAACATAGAGTCAAATGTCAATACTCCACAAAAAACACTGAGTTTAGTATTGTTAATATGCCTTCCTTGTTGTTTGCTCATCTGTTTATTCACTCATGTATGTACAACATAAGAGCAGGTATTCTTGGATTCTTTCTTCGCTTACAAGCTTGAATATGATATTTGACACTCCGAATGACCAAGTACGGGGGTCTCGCTGACCCCCGATGGGGGTTCGGGGGCAACGCCCCAGAAGCTAAATTTAAAATTAGCTTCATAACAAGTATTTATGTTTAAAAAAATTTAAAACATATATAAAATTGTGAAACCCCAGAGGCGCCTAAGGCGCGCGCCTTGGCCGCGCCTTCCTCACTGCGCCTCGCTTCTTCGAAGCGAGGCGCTAAGGTTGCGCCTTACGCCTAGGCGCGCCTTTTAAAACACTGAACCCAACGAACCTCATAATCACAAAAGCTCCCCAACCTTTTTTCTTCTCCAGCCACGATCTCCCTCTTCGGCGGCGCCGCCGTCAGAAAGTTAAGCGTTGGAGGACGGAGGTAGAGAGAGGGAGAGATGGAGGGAGAATCGGAGAAGAGAGGAAAGCAGAATCGAGGGGGGTGGGGGTCTGGGGAGGGTTTAGGGCTTATAGATTTTATTTGGTGGGCTGGGCTTTTAATGGGTATTTTGTGGCCGATTTTTTTTTTTTTTTTAAATCTTTATTGAGTTGGGTATCATTTATGTATATTGAAAATTTAAACTAAATTCAATAGCTAGTTAAATTTTCATTCATGTTTTTTTTTTTTTTTTTAATTTTAAATATTTTTAGTAGTTAGTAAAAAAAATTAAAGTATTTTGGATTTAATCTTTTAATATATCTAAATAAAAATAATAAAAAAATAACGTATCCTCGACGTATCCGTATCCTACATTTTCAGAAATTGACGTATCGCCGTGTCCTATCGTGTCCGTGTCCCGTATCCGTGTCCGTGTCCGTGCTTCTTAGGTGAATTGGCATGATGCCATCACCATGAAACATCTTTTTTTTTTTTTTTGAAATACACTATGAAACATCTTTGATTTCTTATTTTTGCTGTTTCTACGCCCCAAGCTCTTCTGTGGTCATTAGAAGGTTTCTTTTTTAAAAATAAAAAATTTATAAAGATTCTGCAATGTTTCCGTCATTAGTAAACATCTTTGAACTTTGTTATTAATCCAATTCAACGTCCTCGCTGGATGGATAATTGACTAAGCAGATTATGAAGACAAAAAAGTAAAGTTATTCTTCTGGACCCTAGCCTACAAGTACATCATCACCCAAGACAACATTCAAAAGGAAAACCTACATGGCCATTCAAGTTTCACAAGAAGATATGAATGAGTTGGCTAGAAAATTTGGATGCAGGGTGGGTACATGGCCATCAACTTATCTTGGTCTTCCTTTGGGTGGCAATCCAAAAAGCCCTCTGTTTTGGCAACCTATTTTGGAGAAGATTCACCATAAGCTTAACAATTGGCAATATTTCTTCCTCTCCAAAAGTGGTTGGCATACACTTATACAGTCAACTCTCTCCCATATGCCCATATATTTTCTATCTTTATTTAGAATGCCAGCTCAAACAGTAAAGTCTTTTGAAAAAATCTTAGAGAGATTTTCTTTGGGAAGGTGCAAAAAGTAATGGTGGATTACACAATGTAAGCTGGGTCAAGACTCAAATGCCAATTGTTTTGGGAGGTTTAGGCATTGGAAATATAAAATAGAGAAACAAAGCTCTTTTATCTAAATGGATTTGGAGATACTTATGTGAGGGAGGTCCTCTTTGGCAGCAGGTTATTAAAGTAAAGTATTACCATCTAGCCGTTTATCCCAATTGGCCTATGTGTGATGATTCAAGATCTTTCAAAGCTCCATGGAATGAAATCTCAAGGCTGAACAATCTAATAAAGCCACATGTACGAAGAATTCTGGGTAATGGTAATCATACTTCTTTTTGGCATGATGTCTGGGCTACTGATATAGACCTTGCTACAAAATTTTCACAGATTTATAGGCTTTCTAATAATGCTAATGCAACTGTGTCTGAATTATGGAATTTGGAAAATAATGATTGGGACTTGGGTCTAAGAAGATGTCTCAAAGATTCTGAGATTGATGATTGGGCATTTTTGGCCCATATCTTACGATCTTTTGTTCTAAAAAGGATGAATGATACATGGCAATGGACTTTAGATCCATCCAAAAGTTATATAGTACGATCTATGATGTATTTTTTGATGAAGCCGCAAGTCAATGTTATTTAACCTTTATTTACTACCATAGGGAACGGAAAGGTTTCTATCCTAGAAAGATAAAGATTTTTCTTTGGGAGCTTAGTCAGGGTGGTATTAATATATGTGGAACGTCTCCAAAGAAGAATGGCATATGATGCTAACTCACCCTCTTGGTGCATTATGTGTAAATCCAATATGGAAACTCAATGTCATTTATTTGCCTCCTGTGTTTTTGCCCAGCAATATTGGAATTTTATCTTGAATGGCTTTGGTTGGAATATGACTATGCCTGGATCTATACAGGCTATATTGTCTGTGGTATTTTCGGGCCACCTTTCAAAAGAAATGCGGAAACTTTTTGGCTAGCCTTTAATCGATCCTTCTTCTGGTCTTTATGGTGTGAAAGGAATGGAAGGATTTTCAATGACACACAATCATCCTTTGAAGACTTTTTGGATTTAGCTATTTTTAATGCTCTTTATTGGTGTAAATGCTTACATCCTTTTAAGGATCATAGTCTTGCGTCTTTGACTCTTAATTGGAGGTCTTTCTTGTAATTTGCTTATAATGGTTTGGGGTTTTATACCCTTGATCATTTCATTCATTATTGTTTCTCTCTTAAAAAAAAAAGAAACCTACCGTTGCTATCCCCCCAAACTTGCCTTTTCTGTAAAGAGAGTATTGCTGGTTTCAGTTATGGAACATGCTCAACATAAAATGGTGCTTCCATACAGATATCCAGTTCTTCCTGAAATTATTTTGGTGGAAAGGCCTATTATTGCCTCTTAGGAATGAATGCTTGAAGAGCTGTTTTGTGGATCACTTGGTTAGAAAGAAATGACAGAATTTTTAACAACATACATAGAAATGCTAGAGAAACATGATAGAGAATGTAAGGCATTAGGCATATAGCTTCCTTTTGGTCGAAGTCTTACGAACGTTTTGATAATTTGTCTTCTTTCATCACGGGGACCCTTTTTTTTCCCGTAATCTCCCCATGCCTGATGGTAGGAAGGATATCTCCTTGCCTCTCTTCCCTTCTGTTATTTTGGAATGAAATTTCTGCCTCTTATCCACAAAAAAAACCTTTGATCTTTGATATTGTATCTTTCAGGATGTTGCTACGAAATCTATGTGAAAGCAACAATGCGAGAAGAAGCTCGACAGGCAAAGACTGCTAGCGGAAGTACATGATGCAAAACTTACTTATCAATGCTTTCATTCGTGTGCTAAATAAAAGGTTTTTGAAGCACCAAGTTCTATTTGCCCAGTTTCTGTTAGGTTTTAATCATCAATAATATTTTTTTACCTGATACTTTGTATCATCATAACAAATATCAGAATACATTTTTATCATTGTGAGCACCTTTTTAAGCTTACTTTTGCCTGCGTTTAAGCTTGAAATTGGATTAACATGGGTGGAGGAAGGTAAGCTGAAACTATTGAAGATTGTGATTTTTATTTATCTATAAAATTTAGGACGAATTTCC

mRNA sequence

AATTTCACCGCATTTCTTGTTTCTTCTCGCATCTCGTACTCAGGAACAATGGCGTTTTTCCTCAACAAAACCACTCTTGCCTCTCATTTCCGATCTCAATCCCAGGTGGATCCTTCATCAATCTCGCGCCGTGGATTCCACGTCGAAACAGGGACTCGTGAAAAGGCTTTATTAGCTGAGGACCCTTCTCTAAGGCGGTTCAGATCACACAAGAAAGGTGTCTCTCGAATCAAAAGAATTGGAGATGTTCTGACAATTGTGGTTGTTGCAGGATGTTGCTACGAAATCTATGTGAAAGCAACAATGCGAGAAGAAGCTCGACAGGCAAAGACTGCTAGCGGAAGTACATGATGCAAAACTTACTTATCAATGCTTTCATTCGTGTGCTAAATAAAAGGTTTTTGAAGCACCAAGTTCTATTTGCCCAGTTTCTGTTAGGTTTTAATCATCAATAATATTTTTTTACCTGATACTTTGTATCATCATAACAAATATCAGAATACATTTTTATCATTGTGAGCACCTTTTTAAGCTTACTTTTGCCTGCGTTTAAGCTTGAAATTGGATTAACATGGGTGGAGGAAGGTAAGCTGAAACTATTGAAGATTGTGATTTTTATTTATCTATAAAATTTAGGACGAATTTCC

Coding sequence (CDS)

ATGGCGTTTTTCCTCAACAAAACCACTCTTGCCTCTCATTTCCGATCTCAATCCCAGGTGGATCCTTCATCAATCTCGCGCCGTGGATTCCACGTCGAAACAGGGACTCGTGAAAAGGCTTTATTAGCTGAGGACCCTTCTCTAAGGCGGTTCAGATCACACAAGAAAGGTGTCTCTCGAATCAAAAGAATTGGAGATGTTCTGACAATTGTGGTTGTTGCAGGATGTTGCTACGAAATCTATGTGAAAGCAACAATGCGAGAAGAAGCTCGACAGGCAAAGACTGCTAGCGGAAGTACATGA

Protein sequence

MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQAKTASGST
Homology
[Close]
BLAST of Lcy03g014650 vs. ExPASy Swiss-Prot
Match: Q3E870 (Succinate dehydrogenase subunit 7B, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH7B PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.3e-29
Identity = 66/100 (66.00%), Postives = 79/100 (79.00%), Query Frame = 0 

Query: 1   MAFFLNKTTLASHFRSQSQV---DPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKG 60
           MAF LN  +++SH RS S     D  SISRRGFH+E GTREKALLAED +L+RF+SHKK 
Sbjct: 1   MAFLLNNASISSHLRSSSSQKTGDALSISRRGFHIEPGTREKALLAEDSALKRFKSHKKS 60

Query: 61  VSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQAKTAS 98
           V ++KRIGDVLT+VVVAGCCYEIYVKA M++EA  A  +S
Sbjct: 61  VHKLKRIGDVLTVVVVAGCCYEIYVKAVMKKEALAAGKSS 100

[Close]
BLAST of Lcy03g014650 vs. ExPASy Swiss-Prot
Match: Q9C5E8 (Succinate dehydrogenase subunit 7A, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH7A PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.2e-27
Identity = 66/95 (69.47%), Postives = 77/95 (81.05%), Query Frame = 0 

Query: 1  MAFFLNKTTLASHFRSQSQVDPSSI--SRRGFHVETGTREKALLAEDPSLRRFRSHKKGV 60
          MAF LN T+++SH RS SQ    ++  SRRGFHVE G REKALLAED SLRRF+SHKKGV
Sbjct: 1  MAFLLN-TSISSHLRSSSQKTDGALAQSRRGFHVELGAREKALLAEDASLRRFKSHKKGV 60

Query: 61 SRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQA 94
           R+KRIGDVLT+VVVAGCCYEIY +  MR+EA+ A
Sbjct: 61 HRLKRIGDVLTVVVVAGCCYEIYAR-VMRKEAQAA 93

[Close]
BLAST of Lcy03g014650 vs. ExPASy Swiss-Prot
Match: Q6H611 (Succinate dehydrogenase subunit 7, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH7 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 9.5e-12
Identity = 32/58 (55.17%), Postives = 43/58 (74.14%), Query Frame = 0 

Query: 27 RRGFHVETGTREKALLAEDPSLRRFRSHKKGVSRIKRIGDVLTIVVVAGCCYEIYVKA 85
          RRGFHVE G REKALL ED +L+RF+S+K  V ++ ++G++LT VV+  C YEI   A
Sbjct: 31 RRGFHVELGAREKALLEEDTALKRFKSYKNSVKQVSKVGNILTGVVLFACAYEIVALA 88

[Close]
BLAST of Lcy03g014650 vs. ExPASy TrEMBL
Match: A0A6J1C1M2 (succinate dehydrogenase subunit 7B, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111007450 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 8.8e-45
Identity = 94/100 (94.00%), Postives = 98/100 (98.00%), Query Frame = 0 

Query: 1   MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSR 60
           MAFFLN+TTLASHFRSQSQ DPSS+SRRGFHVE GTREKALLAEDPSLRRFRSHKKGVSR
Sbjct: 1   MAFFLNRTTLASHFRSQSQADPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSR 60

Query: 61  IKRIGDVLTIVVVAGCCYEIYVKATMREEARQAKTASGST 101
           IKR+GD+LTIVVVAGCCYEIYVKATMREEARQAKTASGST
Sbjct: 61  IKRMGDILTIVVVAGCCYEIYVKATMREEARQAKTASGST 100

[Close]
BLAST of Lcy03g014650 vs. ExPASy TrEMBL
Match: A0A6J1HVK4 (succinate dehydrogenase subunit 7A, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111468234 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 7.5e-44
Identity = 93/100 (93.00%), Postives = 97/100 (97.00%), Query Frame = 0 

Query: 1   MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSR 60
           MAF LNKTTLASHFRSQSQ DPS++SRRGFHVE GTREKALLAEDPSLRRFRSHKKGVSR
Sbjct: 1   MAFLLNKTTLASHFRSQSQADPSTLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSR 60

Query: 61  IKRIGDVLTIVVVAGCCYEIYVKATMREEARQAKTASGST 101
           IK+IGDVLTIVVVAGCCYEIYV+ATMREEARQAKTASGST
Sbjct: 61  IKKIGDVLTIVVVAGCCYEIYVRATMREEARQAKTASGST 100

[Close]
BLAST of Lcy03g014650 vs. ExPASy TrEMBL
Match: A0A6J1F188 (succinate dehydrogenase subunit 7B, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111441204 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.1e-42
Identity = 93/100 (93.00%), Postives = 95/100 (95.00%), Query Frame = 0 

Query: 1   MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSR 60
           MAF LNKT LAS FRSQSQVDPSS+SRRGFHVE GTREKALLAEDPSLRRFRSHKKGVSR
Sbjct: 1   MAFLLNKTALASRFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSR 60

Query: 61  IKRIGDVLTIVVVAGCCYEIYVKATMREEARQAKTASGST 101
           IK+IGDVLTIVVVAGCCYEIYVKATMREEARQA TASGST
Sbjct: 61  IKKIGDVLTIVVVAGCCYEIYVKATMREEARQAGTASGST 100

[Close]
BLAST of Lcy03g014650 vs. ExPASy TrEMBL
Match: A0A6J1E5D6 (succinate dehydrogenase subunit 7B, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111429643 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.7e-41
Identity = 90/100 (90.00%), Postives = 94/100 (94.00%), Query Frame = 0 

Query: 1   MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSR 60
           MAF L KT+LASHFRSQSQVDPSS SRRGFH+E GTREKALLAEDPSLRRFRSHKKGV+R
Sbjct: 12  MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVAR 71

Query: 61  IKRIGDVLTIVVVAGCCYEIYVKATMREEARQAKTASGST 101
           IK+IGDVLTIVVVAGCCYEIYVKATMREEARQAK AS ST
Sbjct: 72  IKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST 111

[Close]
BLAST of Lcy03g014650 vs. ExPASy TrEMBL
Match: A0A6J1JM91 (succinate dehydrogenase subunit 7A, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111485669 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 5.9e-41
Identity = 91/100 (91.00%), Postives = 92/100 (92.00%), Query Frame = 0 

Query: 1   MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSR 60
           MAF L KT LASHFRSQSQVDPSS SRRGFHVE G REKALLAEDPSLRRFRSHKKGVSR
Sbjct: 1   MAFLLTKTALASHFRSQSQVDPSSPSRRGFHVEPGAREKALLAEDPSLRRFRSHKKGVSR 60

Query: 61  IKRIGDVLTIVVVAGCCYEIYVKATMREEARQAKTASGST 101
           IK+IGDVLTIVVVAGCCYEIYVKATMREEARQAK AS ST
Sbjct: 61  IKQIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST 100

[Close]
BLAST of Lcy03g014650 vs. NCBI nr
Match: XP_022135509.1 (succinate dehydrogenase subunit 7B, mitochondrial-like [Momordica charantia])

HSP 1 Score: 189.1 bits (479), Expect = 1.8e-44
Identity = 94/100 (94.00%), Postives = 98/100 (98.00%), Query Frame = 0 

Query: 1   MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSR 60
           MAFFLN+TTLASHFRSQSQ DPSS+SRRGFHVE GTREKALLAEDPSLRRFRSHKKGVSR
Sbjct: 1   MAFFLNRTTLASHFRSQSQADPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSR 60

Query: 61  IKRIGDVLTIVVVAGCCYEIYVKATMREEARQAKTASGST 101
           IKR+GD+LTIVVVAGCCYEIYVKATMREEARQAKTASGST
Sbjct: 61  IKRMGDILTIVVVAGCCYEIYVKATMREEARQAKTASGST 100

[Close]
BLAST of Lcy03g014650 vs. NCBI nr
Match: XP_023529214.1 (succinate dehydrogenase subunit 7B, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 188.3 bits (477), Expect = 3.1e-44
Identity = 95/100 (95.00%), Postives = 97/100 (97.00%), Query Frame = 0 

Query: 1   MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSR 60
           MAF LNKTT ASHFRSQSQVDPSS+SRRGFHVE GTREKALLAEDPSLRRFRSHKKGVSR
Sbjct: 1   MAFLLNKTTFASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSR 60

Query: 61  IKRIGDVLTIVVVAGCCYEIYVKATMREEARQAKTASGST 101
           IK+IGDVLTIVVVAGCCYEIYVKATMREEARQAKTASGST
Sbjct: 61  IKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKTASGST 100

[Close]
BLAST of Lcy03g014650 vs. NCBI nr
Match: XP_022969157.1 (succinate dehydrogenase subunit 7A, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 186.0 bits (471), Expect = 1.5e-43
Identity = 93/100 (93.00%), Postives = 97/100 (97.00%), Query Frame = 0 

Query: 1   MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSR 60
           MAF LNKTTLASHFRSQSQ DPS++SRRGFHVE GTREKALLAEDPSLRRFRSHKKGVSR
Sbjct: 1   MAFLLNKTTLASHFRSQSQADPSTLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSR 60

Query: 61  IKRIGDVLTIVVVAGCCYEIYVKATMREEARQAKTASGST 101
           IK+IGDVLTIVVVAGCCYEIYV+ATMREEARQAKTASGST
Sbjct: 61  IKKIGDVLTIVVVAGCCYEIYVRATMREEARQAKTASGST 100

[Close]
BLAST of Lcy03g014650 vs. NCBI nr
Match: KAG6587488.1 (Succinate dehydrogenase subunit 7B, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021475.1 Succinate dehydrogenase subunit 7B, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 184.9 bits (468), Expect = 3.4e-43
Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 0 

Query: 1   MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSR 60
           MAF LNKT LAS FRSQSQVDPSS+SRRGFHVE GTREKALLAEDPSLRRFRSHKKGVSR
Sbjct: 1   MAFLLNKTALASRFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSR 60

Query: 61  IKRIGDVLTIVVVAGCCYEIYVKATMREEARQAKTASGST 101
           IK+IGDVLTIVVVAGCCYEIYVKATMREEARQAKTASGST
Sbjct: 61  IKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKTASGST 100

[Close]
BLAST of Lcy03g014650 vs. NCBI nr
Match: XP_022933942.1 (succinate dehydrogenase subunit 7B, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 182.2 bits (461), Expect = 2.2e-42
Identity = 93/100 (93.00%), Postives = 95/100 (95.00%), Query Frame = 0 

Query: 1   MAFFLNKTTLASHFRSQSQVDPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGVSR 60
           MAF LNKT LAS FRSQSQVDPSS+SRRGFHVE GTREKALLAEDPSLRRFRSHKKGVSR
Sbjct: 1   MAFLLNKTALASRFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVSR 60

Query: 61  IKRIGDVLTIVVVAGCCYEIYVKATMREEARQAKTASGST 101
           IK+IGDVLTIVVVAGCCYEIYVKATMREEARQA TASGST
Sbjct: 61  IKKIGDVLTIVVVAGCCYEIYVKATMREEARQAGTASGST 100

[Close]
BLAST of Lcy03g014650 vs. TAIR 10
Match: AT5G62575.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G47833.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 130.6 bits (327), Expect = 7.2e-31
Identity = 66/99 (66.67%), Postives = 79/99 (79.80%), Query Frame = 0 

Query: 1  MAFFLNKTTLASHFRSQSQV--DPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKGV 60
          MAF LN  +++SH RS S    D  SISRRGFH+E GTREKALLAED +L+RF+SHKK V
Sbjct: 1  MAFLLNNASISSHLRSSSSQTGDALSISRRGFHIEPGTREKALLAEDSALKRFKSHKKSV 60

Query: 61 SRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQAKTAS 98
           ++KRIGDVLT+VVVAGCCYEIYVKA M++EA  A  +S
Sbjct: 61 HKLKRIGDVLTVVVVAGCCYEIYVKAVMKKEALAAGKSS 99

[Close]
BLAST of Lcy03g014650 vs. TAIR 10
Match: AT5G62575.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G47833.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 130.2 bits (326), Expect = 9.4e-31
Identity = 66/100 (66.00%), Postives = 79/100 (79.00%), Query Frame = 0 

Query: 1   MAFFLNKTTLASHFRSQSQV---DPSSISRRGFHVETGTREKALLAEDPSLRRFRSHKKG 60
           MAF LN  +++SH RS S     D  SISRRGFH+E GTREKALLAED +L+RF+SHKK 
Sbjct: 1   MAFLLNNASISSHLRSSSSQKTGDALSISRRGFHIEPGTREKALLAEDSALKRFKSHKKS 60

Query: 61  VSRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQAKTAS 98
           V ++KRIGDVLT+VVVAGCCYEIYVKA M++EA  A  +S
Sbjct: 61  VHKLKRIGDVLTVVVVAGCCYEIYVKAVMKKEALAAGKSS 100

[Close]
BLAST of Lcy03g014650 vs. TAIR 10
Match: AT3G47833.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62575.2); Has 42 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 123.6 bits (309), Expect = 8.8e-29
Identity = 66/95 (69.47%), Postives = 77/95 (81.05%), Query Frame = 0 

Query: 1  MAFFLNKTTLASHFRSQSQVDPSSI--SRRGFHVETGTREKALLAEDPSLRRFRSHKKGV 60
          MAF LN T+++SH RS SQ    ++  SRRGFHVE G REKALLAED SLRRF+SHKKGV
Sbjct: 1  MAFLLN-TSISSHLRSSSQKTDGALAQSRRGFHVELGAREKALLAEDASLRRFKSHKKGV 60

Query: 61 SRIKRIGDVLTIVVVAGCCYEIYVKATMREEARQA 94
           R+KRIGDVLT+VVVAGCCYEIY +  MR+EA+ A
Sbjct: 61 HRLKRIGDVLTVVVVAGCCYEIYAR-VMRKEAQAA 93

The following BLAST results are available for this feature:
BLAST of Lcy03g014650 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q3E8701.3e-2966.00Succinate dehydrogenase subunit 7B, mitochondrial OS=Arabidopsis thaliana OX=370... [more]
Q9C5E81.2e-2769.47Succinate dehydrogenase subunit 7A, mitochondrial OS=Arabidopsis thaliana OX=370... [more]
Q6H6119.5e-1255.17Succinate dehydrogenase subunit 7, mitochondrial OS=Oryza sativa subsp. japonica... [more]
BLAST of Lcy03g014650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C1M28.8e-4594.00succinate dehydrogenase subunit 7B, mitochondrial-like OS=Momordica charantia OX... [more]
A0A6J1HVK47.5e-4493.00succinate dehydrogenase subunit 7A, mitochondrial-like OS=Cucurbita maxima OX=36... [more]
A0A6J1F1881.1e-4293.00succinate dehydrogenase subunit 7B, mitochondrial-like OS=Cucurbita moschata OX=... [more]
A0A6J1E5D62.7e-4190.00succinate dehydrogenase subunit 7B, mitochondrial-like OS=Cucurbita moschata OX=... [more]
A0A6J1JM915.9e-4191.00succinate dehydrogenase subunit 7A, mitochondrial-like OS=Cucurbita maxima OX=36... [more]
BLAST of Lcy03g014650 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022135509.11.8e-4494.00succinate dehydrogenase subunit 7B, mitochondrial-like [Momordica charantia][more]
XP_023529214.13.1e-4495.00succinate dehydrogenase subunit 7B, mitochondrial-like [Cucurbita pepo subsp. pe... [more]
XP_022969157.11.5e-4393.00succinate dehydrogenase subunit 7A, mitochondrial-like [Cucurbita maxima][more]
KAG6587488.13.4e-4394.00Succinate dehydrogenase subunit 7B, mitochondrial, partial [Cucurbita argyrosper... [more]
XP_022933942.12.2e-4293.00succinate dehydrogenase subunit 7B, mitochondrial-like [Cucurbita moschata][more]
BLAST of Lcy03g014650 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G62575.17.2e-3166.67unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G62575.29.4e-3166.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G47833.18.8e-2969.47unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034573Succinate dehydrogenase subunit 7, mitochondrialPANTHERPTHR36041SUCCINATE DEHYDROGENASE SUBUNIT 7A, MITOCHONDRIAL-RELATEDcoord: 1..96

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy03g014650.1Lcy03g014650.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
molecular_function GO:0043495 protein-membrane adaptor activity