Lcy03g013840 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g013840
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	umecyanin-like
Location	Chr03: 47800349 .. 47801099 (+)
RNA-Seq Expression	Lcy03g013840
Synteny	Lcy03g013840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCCCCACCAAATACAATTCATCAAAATGGCTACAAGAATGACTTCAATTGCTGGTCTTTTCCTCCTTGGGACTCTCCTACAACTTGTCGCTGCGGTCGATCACGACGTCGGAGGCGATTGTGGTTGGAACCTACCGCCAAACTCTACCTTCTTCTCTGATTGGGCTCGTAATAAGACTTTCTTTGTTGGTGATAAGCTAGGTACACAATCATTCCGTGTCTTACTTTTAGTTTTGATTTTCAACTTTTGAGTTAATTGGTGATTTAACACACTTGTCCTAAAAAAAAGTGCTTGTTTTGTGTAGTGTTCAAATCAAATGCCAATGAGACACACGATGTTGCAGAGCCTCAATCTCAAGCGGATTTTGATGGATGTGTCAAGCCGGGAATATTTTTTAGTACTTCTGCTGTTTTTTCTATCACTTTTGATGGTCCTGGTCGTCGTTACTTTGTTTGTACTATTGGAAACCATTGCAACGTTGGTATGAAATTTTCCATCGACGTCTTGGCACAACCTGGATCACCAAACTCCGCCTTGGCGCCGCCGCCACCTCCTAGCTCCGCTTCATCTTTGAGAGTTGGTGCATCTGCAGCTTTGACTGGATTTCTCTTAACCATCATAGGTTAGTTCATTCATTTTTCTAGTAGTCTCTCCCTATATTGTTTAATTTGAATAAATATTGTAATATCTCACACCACCTATGTTTCGATAAGTGATTGTTATTCTATTTTTAAAAAATAAAAAATATA

mRNA sequence

TCCCCCCACCAAATACAATTCATCAAAATGGCTACAAGAATGACTTCAATTGCTGGTCTTTTCCTCCTTGGGACTCTCCTACAACTTGTCGCTGCGGTCGATCACGACGTCGGAGGCGATTGTGGTTGGAACCTACCGCCAAACTCTACCTTCTTCTCTGATTGGGCTCGTAATAAGACTTTCTTTGTTGGTGATAAGCTAGTGTTCAAATCAAATGCCAATGAGACACACGATGTTGCAGAGCCTCAATCTCAAGCGGATTTTGATGGATGTGTCAAGCCGGGAATATTTTTTAGTACTTCTGCTGTTTTTTCTATCACTTTTGATGGTCCTGGTCGTCGTTACTTTGTTTGTACTATTGGAAACCATTGCAACGTTGGTATGAAATTTTCCATCGACGTCTTGGCACAACCTGGATCACCAAACTCCGCCTTGGCGCCGCCGCCACCTCCTAGCTCCGCTTCATCTTTGAGAGTTGGTGCATCTGCAGCTTTGACTGGATTTCTCTTAACCATCATAGGTTAGTTCATTCATTTTTCTAGTAGTCTCTCCCTATATTGTTTAATTTGAATAAATATTGTAATATCTCACACCACCTATGTTTCGATAAGTGATTGTTATTCTATTTTTAAAAAATAAAAAATATA

Coding sequence (CDS)

ATGGCTACAAGAATGACTTCAATTGCTGGTCTTTTCCTCCTTGGGACTCTCCTACAACTTGTCGCTGCGGTCGATCACGACGTCGGAGGCGATTGTGGTTGGAACCTACCGCCAAACTCTACCTTCTTCTCTGATTGGGCTCGTAATAAGACTTTCTTTGTTGGTGATAAGCTAGTGTTCAAATCAAATGCCAATGAGACACACGATGTTGCAGAGCCTCAATCTCAAGCGGATTTTGATGGATGTGTCAAGCCGGGAATATTTTTTAGTACTTCTGCTGTTTTTTCTATCACTTTTGATGGTCCTGGTCGTCGTTACTTTGTTTGTACTATTGGAAACCATTGCAACGTTGGTATGAAATTTTCCATCGACGTCTTGGCACAACCTGGATCACCAAACTCCGCCTTGGCGCCGCCGCCACCTCCTAGCTCCGCTTCATCTTTGAGAGTTGGTGCATCTGCAGCTTTGACTGGATTTCTCTTAACCATCATAGGTTAG

Protein sequence

MATRMTSIAGLFLLGTLLQLVAAVDHDVGGDCGWNLPPNSTFFSDWARNKTFFVGDKLVFKSNANETHDVAEPQSQADFDGCVKPGIFFSTSAVFSITFDGPGRRYFVCTIGNHCNVGMKFSIDVLAQPGSPNSALAPPPPPSSASSLRVGASAALTGFLLTIIG

Homology

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BLAST of Lcy03g013840 vs. ExPASy Swiss-Prot
Match: P29602 (Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3)

HSP 1 Score: 88.6 bits (218), Expect = 7.3e-17
Identity = 50/124 (40.32%), Postives = 68/124 (54.84%), Query Frame = 0


Query: 26  HDVGGDCGWNLPPNSTFFSDWARNKTFFVGDKLVFKSNANETHDVAEPQSQADFDGC--V 85
           H VG + GW++P +  F+S WA  KTF VGD L F   AN  H+V E +++  FD C  V
Sbjct: 5   HIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPAN-AHNVHEMETKQSFDACNFV 64

Query: 86  KPGIFFSTSAVFSITFDGPGRRYFVCTIGNHCNVGMKFSIDVLAQPGSPNSALAPPPPPS 145
                   ++      D  G  YFVCT+G HC+ G K SI+V+A     N+ ++ PPP S
Sbjct: 65  NSDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINVVA----ANATVSMPPPSS 123

Query: 146 SASS 148
           S  S
Sbjct: 125 SPPS 123

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BLAST of Lcy03g013840 vs. ExPASy Swiss-Prot
Match: P42849 (Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.6e-16
Identity = 47/112 (41.96%), Postives = 61/112 (54.46%), Query Frame = 0


Query: 25  DHDVGGDCGWNLPPNSTFFSDWARNKTFFVGDKLVFKSNANETHDVAEPQSQADFDGCVK 84
           D+DVGGD  W  P +  F+  WA  KTF VGD+L F   A   HDVA     A FD C K
Sbjct: 2   DYDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAG-MHDVAVVTKDA-FDNCKK 61

Query: 85  PG-IFFSTSAVFSITFDGPGRRYFVCTIGNHCNVGMKFSIDVLAQPGSPNSA 136
              I   T+    I  +  G +Y++CT+G+HC VG K SI+V+   G+   A
Sbjct: 62  ENPISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGGAGGGA 111

[Close]

BLAST of Lcy03g013840 vs. ExPASy Swiss-Prot
Match: Q07488 (Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2)

HSP 1 Score: 85.1 bits (209), Expect = 8.0e-16
Identity = 62/172 (36.05%), Postives = 81/172 (47.09%), Query Frame = 0


Query: 8   IAGLFLLGTLLQLVAAV------DHDVGGDCGWNLPPNSTFFSDWARNKTFFVGDKLVFK 67
           +AG+F   T L LV A       D+DVG D  W  P +  F++ WA  KTF VGD+L F 
Sbjct: 1   MAGVFKTVTFLVLVFAAVVVFAEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFD 60

Query: 68  SNANETHDVAEPQSQADFDGCVK-PGIFFSTSAVFSITFDGPGRRYFVCTIGNHCNVGMK 127
             A   HDVA   S+A F+ C K   I   T     I  +  G +YF+CT+G+HC  G K
Sbjct: 61  FAAGR-HDVA-VVSEAAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQK 120

Query: 128 FSIDVLA---------------QPGSPNSALAPPPPPSSASSLRVGASAALT 158
            SI V+A                PGS  S     PP +  ++   G+S   T
Sbjct: 121 LSITVVAAGATGGATPGAGATPAPGSTPSTGGTTPPTAGGTTTPSGSSGTTT 170

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BLAST of Lcy03g013840 vs. ExPASy Swiss-Prot
Match: O82081 (Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.8e-15
Identity = 57/159 (35.85%), Postives = 82/159 (51.57%), Query Frame = 0


Query: 1   MATRMTSIAGLFLLGTLLQLVAAVDHDVGGDCGWNLPPNSTFFSDWARNKTFFVGDKLVF 60
           MA+R   I    L  TL+ L  A DH +GG  GW +         WA  +TF VGD LVF
Sbjct: 1   MASREMLIIISVLATTLIGLTVATDHTIGGPSGWTV---GASLRTWAAGQTFAVGDNLVF 60

Query: 61  KSNANETHDVAEPQSQADFDGC--VKPGIFFSTSAVFSITFDGPGRRYFVCTIGNHCNVG 120
              A   HDV E  ++ +FD C  VKP I F+      +    PG+RYF+C +  HC+ G
Sbjct: 61  SYPA-AFHDVVE-VTKPEFDSCQAVKPLITFANGNSL-VPLTTPGKRYFICGMPGHCSQG 120

Query: 121 MKFSIDVLAQPGSPNSALAPPPP-PSSASSLRVGASAAL 157
           MK  ++V+     P + +AP  P P++  SL   + +++
Sbjct: 121 MKLEVNVV-----PTATVAPTAPLPNTVPSLNAPSPSSV 148

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BLAST of Lcy03g013840 vs. ExPASy Swiss-Prot
Match: P80728 (Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-08
Identity = 41/114 (35.96%), Postives = 55/114 (48.25%), Query Frame = 0


Query: 23  AVDHDVGGDCGW-NLPPNSTFFSDWARNKTFFVGDKLVFKSNANETHDVAEPQSQADFDG 82
           A  H VG   GW  L P    ++ WA +  F VGD L+F  N N+ H+V +   Q  F  
Sbjct: 1   ATVHKVGDSTGWTTLVPYD--YAKWASSNKFHVGDSLLFNYN-NKFHNVLQ-VDQEQFKS 60

Query: 83  CVKPGIFFS-TSAVFSITFDGPGRRYFVCTIGNHCNVGMKFSIDVLAQPGSPNS 135
           C       S TS   SI    PG  YF+C I  HC +G K  +++   PGS ++
Sbjct: 61  CNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQK--VEIKVDPGSSSA 108

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BLAST of Lcy03g013840 vs. ExPASy TrEMBL
Match: A0A6J1HB34 (umecyanin-like OS=Cucurbita moschata OX=3662 GN=LOC111461718 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 6.7e-66
Identity = 126/161 (78.26%), Postives = 137/161 (85.09%), Query Frame = 0


Query: 5   MTSIAGLFLLGTLLQLVAAVDHDVGGDCGWNLPPNSTFFSDWARNKTFFVGDKLVFKSNA 64
           M+SIA LFLLG LLQ+V+AVDHDVGGD GWNLPPN+TFFSDWA NK F VGDKLVF+S A
Sbjct: 6   MSSIASLFLLGALLQVVSAVDHDVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLVFRSKA 65

Query: 65  NETHDVAEPQSQADFDGCVKPGIFFSTSAVFSITFDGPGRRYFVCTIGNHCNVGMKFSID 124
           NE HDVAEP S+ D DGCVKPGI FSTSAVFS+  D PGRRYF+CTIGNHCN GMKF ID
Sbjct: 66  NEMHDVAEPNSEVDLDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGMKFDID 125

Query: 125 VLAQPGSPNSALAPPPPPSSASSLRVGA-SAALTGFLLTII 165
           VLAQPG+PNS L PPPPPSSASSLR GA  AA +G LLTI+
Sbjct: 126 VLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSGLLLTIV 166

[Close]

BLAST of Lcy03g013840 vs. ExPASy TrEMBL
Match: A0A6J1CVB4 (umecyanin-like OS=Momordica charantia OX=3673 GN=LOC111014540 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.3e-65
Identity = 123/165 (74.55%), Postives = 142/165 (86.06%), Query Frame = 0


Query: 1   MATRMTSIAGLFLLGTLLQLVAAVDHDVGGDCGWNLPPNSTFFSDWARNKTFFVGDKLVF 60
           MATR++ +A LF++G LL +VAAVDHDVGGD GWNLPPNSTFFSDW+R++TF VGDKLVF
Sbjct: 1   MATRLSLVASLFVVGALLHVVAAVDHDVGGDFGWNLPPNSTFFSDWSRSRTFSVGDKLVF 60

Query: 61  KSNANETHDVAEPQSQADFDGCVKPGIFFSTSAVFSITFDGPGRRYFVCTIGNHCNVGMK 120
           +S A E+HDVAEP SQADFDGCVKPGI F TSAVFSIT D P RRYF+CTIG+HCN GMK
Sbjct: 61  RSKATESHDVAEPPSQADFDGCVKPGITFGTSAVFSITLDRPRRRYFICTIGSHCNAGMK 120

Query: 121 FSIDVLAQPGSPNSAL-APPPPPSSASSLRVGASAALTGFLLTII 165
           F +D++ QPG+PNSA+  PPPPPSS SSLRVGA A  TGF+LTII
Sbjct: 121 FVVDIVEQPGAPNSAVEPPPPPPSSGSSLRVGAVATFTGFILTII 165

[Close]

BLAST of Lcy03g013840 vs. ExPASy TrEMBL
Match: A0A5D3C3B0 (Umecyanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001020 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.4e-58
Identity = 121/170 (71.18%), Postives = 139/170 (81.76%), Query Frame = 0


Query: 1   MATRM---TSIAGLFLLGTLLQLVAAVDHDVGGDCGWNLPPNSTFFSDWARNKTFFVGDK 60
           MAT++   +SIA LFL+G LLQ+V+AVD+DVGGD GWNLPPN TFFSDW RNKTFFVGDK
Sbjct: 1   MATKLMSSSSIACLFLVGALLQVVSAVDYDVGGDFGWNLPPNPTFFSDWTRNKTFFVGDK 60

Query: 61  LVFKSNANETHDVAEPQSQADFDGCVKPGIFFSTSAVFSITFDGPGRRYFVCTIGNHCNV 120
           LVF+S ++E+HDVAEP+ Q D DGCVKPGI  STSAV SI+ D P RRYF+CTIGNHCN 
Sbjct: 61  LVFRSKSSESHDVAEPERQTDLDGCVKPGITLSTSAVLSISLDSPRRRYFICTIGNHCNA 120

Query: 121 GMKFSIDVLAQPGSPNSALAPPPPPSSASSLRVGA--SAALTG--FLLTI 164
           GMKFS+DV     +PNSAL PPPPPSSASSLR GA  +AA+ G  FLLTI
Sbjct: 121 GMKFSVDVFV---NPNSALLPPPPPSSASSLRFGAVLAAAMAGLFFLLTI 167

[Close]

BLAST of Lcy03g013840 vs. ExPASy TrEMBL
Match: A0A1S3BA22 (umecyanin-like OS=Cucumis melo OX=3656 GN=LOC103487433 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.4e-58
Identity = 121/170 (71.18%), Postives = 139/170 (81.76%), Query Frame = 0


Query: 1   MATRM---TSIAGLFLLGTLLQLVAAVDHDVGGDCGWNLPPNSTFFSDWARNKTFFVGDK 60
           MAT++   +SIA LFL+G LLQ+V+AVD+DVGGD GWNLPPN TFFSDW RNKTFFVGDK
Sbjct: 1   MATKLMSSSSIACLFLVGALLQVVSAVDYDVGGDFGWNLPPNPTFFSDWTRNKTFFVGDK 60

Query: 61  LVFKSNANETHDVAEPQSQADFDGCVKPGIFFSTSAVFSITFDGPGRRYFVCTIGNHCNV 120
           LVF+S ++E+HDVAEP+ Q D DGCVKPGI  STSAV SI+ D P RRYF+CTIGNHCN 
Sbjct: 61  LVFRSKSSESHDVAEPERQTDLDGCVKPGITLSTSAVLSISLDSPRRRYFICTIGNHCNA 120

Query: 121 GMKFSIDVLAQPGSPNSALAPPPPPSSASSLRVGA--SAALTG--FLLTI 164
           GMKFS+DV     +PNSAL PPPPPSSASSLR GA  +AA+ G  FLLTI
Sbjct: 121 GMKFSVDVFV---NPNSALLPPPPPSSASSLRFGAVLAAAMAGLFFLLTI 167

[Close]

BLAST of Lcy03g013840 vs. ExPASy TrEMBL
Match: A0A0A0LWH3 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G348440 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 7.7e-54
Identity = 114/170 (67.06%), Postives = 131/170 (77.06%), Query Frame = 0


Query: 1   MATR---MTSIAGLFLLGTLLQLVAAVDHDVGGDCGWNLPPNSTFFSDWARNKTFFVGDK 60
           MAT+   ++SIA L L+G  L + +AVD+DVGGD GW+LPPN TFFSDWARNKTFFVGDK
Sbjct: 1   MATKLMSLSSIACLLLVGAFLHVASAVDYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDK 60

Query: 61  LVFKSNANETHDVAEPQSQADFDGCVKPGIFFSTSAVFSITFDGPGRRYFVCTIGNHCNV 120
           LVF+S A+ETHDVAEP  Q D DGCV+PGI  STSAV SI+ D P RRYF+CTIGNHCN 
Sbjct: 61  LVFRSKASETHDVAEPDGQVDLDGCVEPGISLSTSAVLSISLDSPRRRYFICTIGNHCNA 120

Query: 121 GMKFSIDVLAQPGSPNSALAPPPPPSSASSLRVGA--SAALTG--FLLTI 164
           GMKF++DV   P S     A PPPPSSASSLR GA  +AA+ G  FLLTI
Sbjct: 121 GMKFAVDVFINPNS-----AMPPPPSSASSLRFGAVLAAAMAGLFFLLTI 165

[Close]

BLAST of Lcy03g013840 vs. NCBI nr
Match: XP_023516899.1 (umecyanin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.0 bits (676), Expect = 4.3e-67
Identity = 129/161 (80.12%), Postives = 139/161 (86.34%), Query Frame = 0


Query: 5   MTSIAGLFLLGTLLQLVAAVDHDVGGDCGWNLPPNSTFFSDWARNKTFFVGDKLVFKSNA 64
           M+SIA LFLLG LLQ+VAAVDHDVGGD GWNLP N+TFFSDWARNK F VGDKLVF+S A
Sbjct: 6   MSSIASLFLLGALLQVVAAVDHDVGGDFGWNLPSNTTFFSDWARNKAFSVGDKLVFRSKA 65

Query: 65  NETHDVAEPQSQADFDGCVKPGIFFSTSAVFSITFDGPGRRYFVCTIGNHCNVGMKFSID 124
           NE HDVAEP S+ DFDGCVKPGI FSTSAVFS+  D PGRRYF+CTIGNHCN GMKF ID
Sbjct: 66  NEMHDVAEPNSEVDFDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGMKFDID 125

Query: 125 VLAQPGSPNSALAPPPPPSSASSLRVGA-SAALTGFLLTII 165
           VLAQPG+PNS L PPPPPSSASSLR GA  AA +GFLLTI+
Sbjct: 126 VLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSGFLLTIV 166

[Close]

BLAST of Lcy03g013840 vs. NCBI nr
Match: KAG6589839.1 (Uclacyanin 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 262.3 bits (669), Expect = 2.8e-66
Identity = 128/161 (79.50%), Postives = 138/161 (85.71%), Query Frame = 0


Query: 5   MTSIAGLFLLGTLLQLVAAVDHDVGGDCGWNLPPNSTFFSDWARNKTFFVGDKLVFKSNA 64
           M+SIA LFLLG LLQ+VAAVDHDVGGD GWNLPPN+TFFSDWA NK F VGDKLVF+S A
Sbjct: 6   MSSIASLFLLGALLQVVAAVDHDVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLVFRSKA 65

Query: 65  NETHDVAEPQSQADFDGCVKPGIFFSTSAVFSITFDGPGRRYFVCTIGNHCNVGMKFSID 124
           NE HDVAEP S+ DFDGCVKPGI FSTSAVFS+  D PGRRYF+CTIGNHCN GMKF ID
Sbjct: 66  NEMHDVAEPNSEVDFDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGMKFDID 125

Query: 125 VLAQPGSPNSALAPPPPPSSASSLRVGA-SAALTGFLLTII 165
           VLAQPG+PNS L PPPPPSSASSLR GA  AA + FLLTI+
Sbjct: 126 VLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSVFLLTIV 166

[Close]

BLAST of Lcy03g013840 vs. NCBI nr
Match: XP_022961110.1 (umecyanin-like [Cucurbita moschata])

HSP 1 Score: 260.0 bits (663), Expect = 1.4e-65
Identity = 126/161 (78.26%), Postives = 137/161 (85.09%), Query Frame = 0


Query: 5   MTSIAGLFLLGTLLQLVAAVDHDVGGDCGWNLPPNSTFFSDWARNKTFFVGDKLVFKSNA 64
           M+SIA LFLLG LLQ+V+AVDHDVGGD GWNLPPN+TFFSDWA NK F VGDKLVF+S A
Sbjct: 6   MSSIASLFLLGALLQVVSAVDHDVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLVFRSKA 65

Query: 65  NETHDVAEPQSQADFDGCVKPGIFFSTSAVFSITFDGPGRRYFVCTIGNHCNVGMKFSID 124
           NE HDVAEP S+ D DGCVKPGI FSTSAVFS+  D PGRRYF+CTIGNHCN GMKF ID
Sbjct: 66  NEMHDVAEPNSEVDLDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGMKFDID 125

Query: 125 VLAQPGSPNSALAPPPPPSSASSLRVGA-SAALTGFLLTII 165
           VLAQPG+PNS L PPPPPSSASSLR GA  AA +G LLTI+
Sbjct: 126 VLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSGLLLTIV 166

[Close]

BLAST of Lcy03g013840 vs. NCBI nr
Match: XP_022145012.1 (umecyanin-like [Momordica charantia])

HSP 1 Score: 257.7 bits (657), Expect = 6.9e-65
Identity = 123/165 (74.55%), Postives = 142/165 (86.06%), Query Frame = 0


Query: 1   MATRMTSIAGLFLLGTLLQLVAAVDHDVGGDCGWNLPPNSTFFSDWARNKTFFVGDKLVF 60
           MATR++ +A LF++G LL +VAAVDHDVGGD GWNLPPNSTFFSDW+R++TF VGDKLVF
Sbjct: 1   MATRLSLVASLFVVGALLHVVAAVDHDVGGDFGWNLPPNSTFFSDWSRSRTFSVGDKLVF 60

Query: 61  KSNANETHDVAEPQSQADFDGCVKPGIFFSTSAVFSITFDGPGRRYFVCTIGNHCNVGMK 120
           +S A E+HDVAEP SQADFDGCVKPGI F TSAVFSIT D P RRYF+CTIG+HCN GMK
Sbjct: 61  RSKATESHDVAEPPSQADFDGCVKPGITFGTSAVFSITLDRPRRRYFICTIGSHCNAGMK 120

Query: 121 FSIDVLAQPGSPNSAL-APPPPPSSASSLRVGASAALTGFLLTII 165
           F +D++ QPG+PNSA+  PPPPPSS SSLRVGA A  TGF+LTII
Sbjct: 121 FVVDIVEQPGAPNSAVEPPPPPPSSGSSLRVGAVATFTGFILTII 165

[Close]

BLAST of Lcy03g013840 vs. NCBI nr
Match: KAG7023510.1 (hypothetical protein SDJN02_14536, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 249.6 bits (636), Expect = 1.9e-62
Identity = 124/161 (77.02%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 5   MTSIAGLFLLGTLLQLVAAVDHDVGGDCGWNLPPNSTFFSDWARNKTFFVGDKLVFKSNA 64
           M+SIA LFLLG LLQ+V     DVGGD GWNLPPN+TFFSDWA NK F VGDKLVF+S A
Sbjct: 6   MSSIASLFLLGALLQVVG----DVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLVFRSKA 65

Query: 65  NETHDVAEPQSQADFDGCVKPGIFFSTSAVFSITFDGPGRRYFVCTIGNHCNVGMKFSID 124
           NE HDVAEP S+ DFDGCVKPGI FSTSAVFS+  D PGRRYF+CTIGNHCN GMKF ID
Sbjct: 66  NEMHDVAEPNSEVDFDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGMKFDID 125

Query: 125 VLAQPGSPNSALAPPPPPSSASSLRVGA-SAALTGFLLTII 165
           VLAQPG+PNS L PPPPPSSASSLR GA  AA +GFLLTI+
Sbjct: 126 VLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSGFLLTIV 162

[Close]

BLAST of Lcy03g013840 vs. TAIR 10
Match: AT5G20230.1 (blue-copper-binding protein )

HSP 1 Score: 85.1 bits (209), Expect = 5.7e-17
Identity = 62/172 (36.05%), Postives = 81/172 (47.09%), Query Frame = 0


Query: 8   IAGLFLLGTLLQLVAAV------DHDVGGDCGWNLPPNSTFFSDWARNKTFFVGDKLVFK 67
           +AG+F   T L LV A       D+DVG D  W  P +  F++ WA  KTF VGD+L F 
Sbjct: 1   MAGVFKTVTFLVLVFAAVVVFAEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFD 60

Query: 68  SNANETHDVAEPQSQADFDGCVK-PGIFFSTSAVFSITFDGPGRRYFVCTIGNHCNVGMK 127
             A   HDVA   S+A F+ C K   I   T     I  +  G +YF+CT+G+HC  G K
Sbjct: 61  FAAGR-HDVA-VVSEAAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQK 120

Query: 128 FSIDVLA---------------QPGSPNSALAPPPPPSSASSLRVGASAALT 158
            SI V+A                PGS  S     PP +  ++   G+S   T
Sbjct: 121 LSITVVAAGATGGATPGAGATPAPGSTPSTGGTTPPTAGGTTTPSGSSGTTT 170

[Close]

BLAST of Lcy03g013840 vs. TAIR 10
Match: AT2G32300.1 (uclacyanin 1 )

HSP 1 Score: 82.0 bits (201), Expect = 4.8e-16
Identity = 57/159 (35.85%), Postives = 82/159 (51.57%), Query Frame = 0


Query: 1   MATRMTSIAGLFLLGTLLQLVAAVDHDVGGDCGWNLPPNSTFFSDWARNKTFFVGDKLVF 60
           MA+R   I    L  TL+ L  A DH +GG  GW +         WA  +TF VGD LVF
Sbjct: 1   MASREMLIIISVLATTLIGLTVATDHTIGGPSGWTV---GASLRTWAAGQTFAVGDNLVF 60

Query: 61  KSNANETHDVAEPQSQADFDGC--VKPGIFFSTSAVFSITFDGPGRRYFVCTIGNHCNVG 120
              A   HDV E  ++ +FD C  VKP I F+      +    PG+RYF+C +  HC+ G
Sbjct: 61  SYPA-AFHDVVE-VTKPEFDSCQAVKPLITFANGNSL-VPLTTPGKRYFICGMPGHCSQG 120

Query: 121 MKFSIDVLAQPGSPNSALAPPPP-PSSASSLRVGASAAL 157
           MK  ++V+     P + +AP  P P++  SL   + +++
Sbjct: 121 MKLEVNVV-----PTATVAPTAPLPNTVPSLNAPSPSSV 148

[Close]

BLAST of Lcy03g013840 vs. TAIR 10
Match: AT3G60270.1 (Cupredoxin superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 2.7e-11
Identity = 54/169 (31.95%), Postives = 78/169 (46.15%), Query Frame = 0


Query: 11  LFLLGTLLQLVAAVDHDVGGDCGWNLPPNSTFFSDWARNKTFFVGDKLVFKSNANETHDV 70
           L LL   +  V AV   VG + GW +      ++ W   KTF VGD L FK     +H V
Sbjct: 11  LLLLLVAVPAVFAVTFQVGDNDGWTI---GVEYTSWVSEKTFRVGDTLEFK--YGPSHSV 70

Query: 71  AEPQSQADFDGC--VKPGIFFSTSAVFSITFDGPGRRYFVCTIGNHCNVGMKFSIDVLA- 130
           A   ++AD+DGC   +P   FS      I     G  +F+C    HC++GMK ++ VLA 
Sbjct: 71  A-VVNKADYDGCETSRPTQSFSDGDT-KIDLTKVGAIHFLCLTPGHCSLGMKLAVQVLAA 130

Query: 131 --------------QPGSPN---SALAPPPPPSSASSLRVGASAALTGF 160
                          P +P+   SA +P P P +A +L+  AS  +  +
Sbjct: 131 VSLEPPPSPSAPSPSPSAPSPSPSAPSPSPSPGNAENLKNAASKGIMSY 172

[Close]

BLAST of Lcy03g013840 vs. TAIR 10
Match: AT3G20570.1 (early nodulin-like protein 9 )

HSP 1 Score: 59.3 bits (142), Expect = 3.4e-09
Identity = 38/138 (27.54%), Postives = 62/138 (44.93%), Query Frame = 0


Query: 10  GLFLLGTLLQLVAAVDHDVGGDCGWNLPPNSTFFSDWARNKTFFVGDKLVFKSNANETHD 69
           GL     ++    A +  VGG  GW +P  S  +S WA    F +GD L+F   +N+   
Sbjct: 14  GLLCFLMIVDRAYAREFTVGGATGWTVPSGSQVYSQWAEQSRFQIGDSLLFVYQSNQDSV 73

Query: 70  VAEPQSQADFDGCVKPGIFFSTSAVFSITFDGPGRRYFVCTIGNHCNVGMKFSIDVLA-Q 129
           +   +   D      P   F+     S+T +  G  YF+    ++C    K  + V+A +
Sbjct: 74  LQVTRDAYDSCNTDSPTAKFADGKT-SVTLNHSGPYYFISGNKDNCKKNEKLVVIVMADR 133

Query: 130 PGSPNSALAPPPPPSSAS 147
            G+ N+A +PP P  + S
Sbjct: 134 SGNKNTASSPPSPAPAPS 150

[Close]

BLAST of Lcy03g013840 vs. TAIR 10
Match: AT5G26330.1 (Cupredoxin superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 7.5e-09
Identity = 42/139 (30.22%), Postives = 61/139 (43.88%), Query Frame = 0


Query: 8   IAGLFLLGTLLQLVAAVDHDVGGDCGWNLPPNSTFFSDWARNKTFFVGDKLVFKSNANET 67
           +A L  +  +L+L  A  + VG   GW    N   +  WA  KTF +GD ++F+ N  + 
Sbjct: 6   VAALACIVVMLRLSEAAVYKVGDSAGWTTIAN-VDYKLWASTKTFHIGDTVLFEYNP-QF 65

Query: 68  HDVAEPQSQADFDGCVKPGIFFSTSAVFSITFDGPGRRYFVCTIGNHCNVGMKFSIDVLA 127
           H+V                I   T+   SIT    G  +F C +  HC  G K  + VL 
Sbjct: 66  HNVMRVTHPMYRSCNTSKPISTFTTGNDSITLTNHGHHFFFCGVPGHCLAGQKLDLHVLL 125

Query: 128 QPGSPNSALAPPPPPSSAS 147
              S  + L+ PP  SS+S
Sbjct: 126 PASS--TPLSDPPTSSSSS 140

The following BLAST results are available for this feature:

BLAST of Lcy03g013840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29602	7.3e-17	40.32	Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3	[more]
P42849	3.6e-16	41.96	Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1	[more]
Q07488	8.0e-16	36.05	Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2	[more]
O82081	6.8e-15	35.85	Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1	[more]
P80728	1.6e-08	35.96	Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1	[more]

BLAST of Lcy03g013840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HB34	6.7e-66	78.26	umecyanin-like OS=Cucurbita moschata OX=3662 GN=LOC111461718 PE=4 SV=1	[more]
A0A6J1CVB4	3.3e-65	74.55	umecyanin-like OS=Momordica charantia OX=3673 GN=LOC111014540 PE=4 SV=1	[more]
A0A5D3C3B0	1.4e-58	71.18	Umecyanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00102...	[more]
A0A1S3BA22	1.4e-58	71.18	umecyanin-like OS=Cucumis melo OX=3656 GN=LOC103487433 PE=4 SV=1	[more]
A0A0A0LWH3	7.7e-54	67.06	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G348440...	[more]

BLAST of Lcy03g013840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516899.1	4.3e-67	80.12	umecyanin-like [Cucurbita pepo subsp. pepo]	[more]
KAG6589839.1	2.8e-66	79.50	Uclacyanin 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022961110.1	1.4e-65	78.26	umecyanin-like [Cucurbita moschata]	[more]
XP_022145012.1	6.9e-65	74.55	umecyanin-like [Momordica charantia]	[more]
KAG7023510.1	1.9e-62	77.02	hypothetical protein SDJN02_14536, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Lcy03g013840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20230.1	5.7e-17	36.05	blue-copper-binding protein	[more]
AT2G32300.1	4.8e-16	35.85	uclacyanin 1	[more]
AT3G60270.1	2.7e-11	31.95	Cupredoxin superfamily protein	[more]
AT3G20570.1	3.4e-09	27.54	early nodulin-like protein 9	[more]
AT5G26330.1	7.5e-09	30.22	Cupredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 21..128 e-value: 7.9E-28 score: 98.8
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 22..127
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 34..119 e-value: 1.5E-14 score: 53.7
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 24..127 score: 33.07407
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 11..142
None	No IPR available	PANTHER	PTHR33021:SF360	OS08G0482600 PROTEIN	coord: 11..142
IPR028871	Blue (type 1) copper protein, binding site	PROSITE	PS00196	COPPER_BLUE	coord: 103..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g013840.1	Lcy03g013840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron transfer activity