Lcy03g013460 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g013460
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Amino-acid racemase isoform 2
Location	Chr03: 47472361 .. 47474191 (-)
RNA-Seq Expression	Lcy03g013460
Synteny	Lcy03g013460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTGTCCCACTGACATTCCTCCATTTTTGTCATTCTTCTCTTCAACGGCTGACAGCGCTTCACTGCTAAAAAGGCTGACATATGACAGATTTTCAATAATGTAAGATTCTCTCAAACTCTTCTTTCATTTTGATTTTTGACAATCAATTCAATCACCTCACATCGTGGAGCTTCTTTTCATGTCTTACCTAGTTTTGCTCCACAGTATCTGTCTGCTATGAATTCTCTTCCTTCCAAAACTATCCAACCAACTGTACAATTGCTTTTCGCCTTGAATGTGAAGAAACCCAGAATCATTTCTTCTTTACAACCTTTGTGGCTTATGGCTTGAGATATCATGTCCTTGTTGATATTTTCATCCCGAGAAATATTTGGGTATTGGGGCATGAGTAAAACAGGCTGCTTTTTTATTTGAGTTTCTGAAGAAGTTTGATGCTGGAATTTGGGAGTTGATGAGTCTTCTTTTATGCTTTCCCCATTGAATTATCTGAACTGAAGAGAAATATGGCTGCTTAGTAAGATTCAGAGTTGAATCACACTGAAAATTCTTGCTCTTTACATAAAGGATGCTTGATGGAGGGATGGCCATGCCATTTTATGGACTGAATTGCCCAGCACCTATTCGACGAAATGCCAACAAGAGGATTACTCACTTTAGAAGGAGATTAAACCAGTATTCATCTGTGCAGATTTCCTCTGTTATTCAAACTGATGAGAATGACAACTTACCAGGATCCAAGAAGATATCAAGTTCAGGAAAATCTTTGTCAAAAAGTCGAACTCCCAAACCGCTTCTTGTCCAGCCAAATACTGTGGGTGTCATAGGAGGAGTGTCGGTTATTTCTACTCTACTTTTCTTGGAAAAGCTCGTGTGGTGGAGTTTGAAGGATGGACAAGAGAGCATACCTTTTGTTGTCTGCAGCGATCCAGCATTGGGCAAAGGGATTTTCCCTCTAACTCCGTCGAGTACATTCAGCGCAAGTTCTTCTCAACATGGTCATAGTGATGCTCCAATCATTGAGAATTTGAAGCAAAAAAGGGCGTTTCTCGAACAGTCCGGAGCTCGGTGCCTAATTACACCTTGCCATCTTTCACATAAGTGGCTTGATGACACAACTGAGAGCTGCAAATTACCTTTCCTTCATGTGGGAGATTGTGTTGCTATGGAGCTTAAAGAGGCTAAGCTTAAGCCGCTTGAAGCAGGGAGCAGTGTCCGGATTGGGCTGCTTGCGACTGATAAAGCAATAGTAACTGGTTTTTACCATGAGAGGCTACAAAATCAGGTTTTGTAAATACATTCTCAACTAATGGTCGATACTCTAATTTACTTGATAAAGAGTGATGCACAAGCAATATGAAGCAGCAACACATAACAAAATCTATGCTTTATACTAATCTCTGAGCATCCAGAAAAATGGATAACTTTGCCATGCCTCATAATTAAAATGGATGTTGTTGAAGTGATTGCGGGCATTTTTCTACACTGTTCTGTAGATGATTCCAAACTTTTCTTCTGATTTCCTTTTCTTTCTTCAGGGCTTTGATGTTGTCTTGCCAGACGAAGCCACCATGAAACATATTGTAGTTCCTGCAGTTGAAGCTTTCAACAAAAGGGATCAGGAAGGAGCAAGAAATCTGTTGAGAATTGCTGTTCATGTGCTTTTGATAAGAGCTGTGAATATGGTAATACTTGCTTCTGATGAATTGCTTAATCTTCTTCCTCCTGATGATCCTATTCTGAAAAAATGTATTGACCCCATGGATGCGTTGGCCAGAGCAGCCATTAAATGGTCTAGATCTACAGGAAATTTACATGAGAAAGCTTAG

mRNA sequence

ATGCTCTGTCCCACTGACATTCCTCCATTTTTGTCATTCTTCTCTTCAACGGCTGACAGCGCTTCACTGCTAAAAAGGCTGACATATGACAGATTTTCAATAATGATGCTTGATGGAGGGATGGCCATGCCATTTTATGGACTGAATTGCCCAGCACCTATTCGACGAAATGCCAACAAGAGGATTACTCACTTTAGAAGGAGATTAAACCAGTATTCATCTGTGCAGATTTCCTCTGTTATTCAAACTGATGAGAATGACAACTTACCAGGATCCAAGAAGATATCAAGTTCAGGAAAATCTTTGTCAAAAAGTCGAACTCCCAAACCGCTTCTTGTCCAGCCAAATACTGTGGGTGTCATAGGAGGAGTGTCGGTTATTTCTACTCTACTTTTCTTGGAAAAGCTCGTGTGGTGGAGTTTGAAGGATGGACAAGAGAGCATACCTTTTGTTGTCTGCAGCGATCCAGCATTGGGCAAAGGGATTTTCCCTCTAACTCCGTCGAGTACATTCAGCGCAAGTTCTTCTCAACATGGTCATAGTGATGCTCCAATCATTGAGAATTTGAAGCAAAAAAGGGCGTTTCTCGAACAGTCCGGAGCTCGGTGCCTAATTACACCTTGCCATCTTTCACATAAGTGGCTTGATGACACAACTGAGAGCTGCAAATTACCTTTCCTTCATGTGGGAGATTGTGTTGCTATGGAGCTTAAAGAGGCTAAGCTTAAGCCGCTTGAAGCAGGGAGCAGTGTCCGGATTGGGCTGCTTGCGACTGATAAAGCAATAGTAACTGGTTTTTACCATGAGAGGCTACAAAATCAGGGCTTTGATGTTGTCTTGCCAGACGAAGCCACCATGAAACATATTGTAGTTCCTGCAGTTGAAGCTTTCAACAAAAGGGATCAGGAAGGAGCAAGAAATCTGTTGAGAATTGCTGTTCATGTGCTTTTGATAAGAGCTGTGAATATGGTAATACTTGCTTCTGATGAATTGCTTAATCTTCTTCCTCCTGATGATCCTATTCTGAAAAAATGTATTGACCCCATGGATGCGTTGGCCAGAGCAGCCATTAAATGGTCTAGATCTACAGGAAATTTACATGAGAAAGCTTAG

Coding sequence (CDS)

ATGCTCTGTCCCACTGACATTCCTCCATTTTTGTCATTCTTCTCTTCAACGGCTGACAGCGCTTCACTGCTAAAAAGGCTGACATATGACAGATTTTCAATAATGATGCTTGATGGAGGGATGGCCATGCCATTTTATGGACTGAATTGCCCAGCACCTATTCGACGAAATGCCAACAAGAGGATTACTCACTTTAGAAGGAGATTAAACCAGTATTCATCTGTGCAGATTTCCTCTGTTATTCAAACTGATGAGAATGACAACTTACCAGGATCCAAGAAGATATCAAGTTCAGGAAAATCTTTGTCAAAAAGTCGAACTCCCAAACCGCTTCTTGTCCAGCCAAATACTGTGGGTGTCATAGGAGGAGTGTCGGTTATTTCTACTCTACTTTTCTTGGAAAAGCTCGTGTGGTGGAGTTTGAAGGATGGACAAGAGAGCATACCTTTTGTTGTCTGCAGCGATCCAGCATTGGGCAAAGGGATTTTCCCTCTAACTCCGTCGAGTACATTCAGCGCAAGTTCTTCTCAACATGGTCATAGTGATGCTCCAATCATTGAGAATTTGAAGCAAAAAAGGGCGTTTCTCGAACAGTCCGGAGCTCGGTGCCTAATTACACCTTGCCATCTTTCACATAAGTGGCTTGATGACACAACTGAGAGCTGCAAATTACCTTTCCTTCATGTGGGAGATTGTGTTGCTATGGAGCTTAAAGAGGCTAAGCTTAAGCCGCTTGAAGCAGGGAGCAGTGTCCGGATTGGGCTGCTTGCGACTGATAAAGCAATAGTAACTGGTTTTTACCATGAGAGGCTACAAAATCAGGGCTTTGATGTTGTCTTGCCAGACGAAGCCACCATGAAACATATTGTAGTTCCTGCAGTTGAAGCTTTCAACAAAAGGGATCAGGAAGGAGCAAGAAATCTGTTGAGAATTGCTGTTCATGTGCTTTTGATAAGAGCTGTGAATATGGTAATACTTGCTTCTGATGAATTGCTTAATCTTCTTCCTCCTGATGATCCTATTCTGAAAAAATGTATTGACCCCATGGATGCGTTGGCCAGAGCAGCCATTAAATGGTCTAGATCTACAGGAAATTTACATGAGAAAGCTTAG

Protein sequence

MLCPTDIPPFLSFFSSTADSASLLKRLTYDRFSIMMLDGGMAMPFYGLNCPAPIRRNANKRITHFRRRLNQYSSVQISSVIQTDENDNLPGSKKISSSGKSLSKSRTPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQESIPFVVCSDPALGKGIFPLTPSSTFSASSSQHGHSDAPIIENLKQKRAFLEQSGARCLITPCHLSHKWLDDTTESCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDKAIVTGFYHERLQNQGFDVVLPDEATMKHIVVPAVEAFNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLLPPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA

Homology

[Close]

BLAST of Lcy03g013460 vs. ExPASy Swiss-Prot
Match: O58403 (Aspartate racemase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=PH0670 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.6e-14
Identity = 67/251 (26.69%), Postives = 113/251 (45.02%), Query Frame = 0


Query: 117 TVGVIGGVSVISTL-LFLEKLVWWSLKDGQESIPFVVCSDP--------ALGKGIFPLTP 176
           T+G++GG+  ++T  LF   ++    K  QE    ++ ++P         LGKG  P  P
Sbjct: 3   TIGILGGMGPLATAELFRRIVIKTPAKRDQEHPKVIIFNNPQIPDRTAYILGKGEDP-RP 62

Query: 177 SSTFSASSSQHGHSDAPIIENLKQKRAFLEQSGARCLITPCHLSHKWLDDTTESCKLPFL 236
              ++A                  KR  LE+ GA  +I PC+ +H +++D  ++ K+P +
Sbjct: 63  QLIWTA------------------KR--LEECGADFIIMPCNTAHAFVEDIRKAIKIPII 122

Query: 237 HVGDCVAMELKEAKLKPLEAGSSVRIGLLATDKAIVTGFYHERLQNQGFDVVLPDEATMK 296
            + +  A ++KE   K        + GLLAT   IV+G Y +     G +++ P E   K
Sbjct: 123 SMIEETAKKVKELGFK--------KAGLLATTGTIVSGVYEKEFSKYGVEIMTPTEDEQK 182

Query: 297 HIVVPAVEAFNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLLPPDDPILKKCID 356
            ++    E     + +  R LL     +L  R    +I    E+  +L  DD +    ID
Sbjct: 183 DVMRGIYEGVKAGNLKLGRELLLKTAKILEERGAECIIAGCTEVSVVLKQDD-LKVPLID 223

Query: 357 PMDALARAAIK 359
           PMD +A  A+K
Sbjct: 243 PMDVIAEVAVK 223

[Close]

BLAST of Lcy03g013460 vs. ExPASy TrEMBL
Match: A0A6J1L4S4 (uncharacterized protein LOC111499133 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499133 PE=4 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 1.4e-164
Identity = 296/335 (88.36%), Postives = 313/335 (93.43%), Query Frame = 0


Query: 36  MLDGGMAMPFYGLNCPAPIRRNANKRITHFRRRLNQYSSVQISSVIQTDENDNLPGSKKI 95
           MLDGGMAMPFY LNCPAP+RRNAN+ IT FRRRLN YSS+QI SV+QTDENDNLP SKKI
Sbjct: 1   MLDGGMAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKKI 60

Query: 96  SSSGKSLSKSRTPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQESIPFVVCSD 155
           SS+GKS+SK R PKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQ+SIPFVVCSD
Sbjct: 61  SSAGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSD 120

Query: 156 PALGKGIFPLTPSSTFSASSSQHGHSDAPIIENLKQKRAFLEQSGARCLITPCHLSHKWL 215
           PALGKGI PLT  +TF+A+SSQH  +DAPIIE LKQK  FLEQSGARCLITPCHLSH+WL
Sbjct: 121 PALGKGIPPLTSLTTFTANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWL 180

Query: 216 DDTTESCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDKAIVTGFYHERLQNQG 275
            DT  SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATD AIVTGFY ERLQNQG
Sbjct: 181 GDT--SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQG 240

Query: 276 FDVVLPDEATMKHIVVPAVEAFNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 335
           F+VVLPDEAT+KHI+VPAVEA NKRDQEGARNLLRIAVH+LLIRAVN+VILASDELLNLL
Sbjct: 241 FEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNLL 300

Query: 336 PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA 371
           PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA
Sbjct: 301 PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA 333

[Close]

BLAST of Lcy03g013460 vs. ExPASy TrEMBL
Match: A0A6J1EU92 (uncharacterized protein LOC111437803 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437803 PE=4 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 7.0e-164
Identity = 295/335 (88.06%), Postives = 311/335 (92.84%), Query Frame = 0


Query: 36  MLDGGMAMPFYGLNCPAPIRRNANKRITHFRRRLNQYSSVQISSVIQTDENDNLPGSKKI 95
           MLDGGMAMPFY LNCPAP+RRNAN+ IT FRRRLN YSS+QI SV+QTDENDNLP SKKI
Sbjct: 1   MLDGGMAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKKI 60

Query: 96  SSSGKSLSKSRTPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQESIPFVVCSD 155
           S+ GKS+SK R PKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQ+SIPFVVCSD
Sbjct: 61  STPGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSD 120

Query: 156 PALGKGIFPLTPSSTFSASSSQHGHSDAPIIENLKQKRAFLEQSGARCLITPCHLSHKWL 215
           PALGKGI PLT  +TF A+SSQH  +DAPIIE LKQK  FLEQSGARCLITPCHLSH+WL
Sbjct: 121 PALGKGIPPLTSLTTFPANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWL 180

Query: 216 DDTTESCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDKAIVTGFYHERLQNQG 275
            DT  SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATD AIVTGFY ERLQNQG
Sbjct: 181 SDT--SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQG 240

Query: 276 FDVVLPDEATMKHIVVPAVEAFNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 335
           F+VVLPDEAT+KHI+VPAVEA NKRDQEGARNLLRIAVH+LLIRAVN+VILASDELLNLL
Sbjct: 241 FEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNLL 300

Query: 336 PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA 371
           PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA
Sbjct: 301 PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA 333

[Close]

BLAST of Lcy03g013460 vs. ExPASy TrEMBL
Match: A0A5A7TXR8 (Amino-acid racemase isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00390 PE=4 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 6.4e-157
Identity = 285/332 (85.84%), Postives = 301/332 (90.66%), Query Frame = 0


Query: 35  MMLDGGMAMPFYGLNCPAPIRRNANKRITHFRRRLNQYSSVQISSVIQTDENDNLPGSKK 94
           MML GGMAM FY   CPAP+RRNAN+ IT FRRR+N YSSVQISSV+QTD NDNLP SKK
Sbjct: 1   MMLHGGMAMHFYAPICPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKK 60

Query: 95  ISSSGKSLSKSRTPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQESIPFVVCS 154
           ISS GKSLSK+RTPKPLLVQPNTVGVIGGVSV STLLFLEKLVWWSLKDGQESIPFVVCS
Sbjct: 61  ISSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS 120

Query: 155 DPALGKGIFPLTPSSTFSASSSQHGHSDAPIIENLKQKRAFLEQSGARCLITPCHLSHKW 214
           +PALGKGI P+T   TFS  SSQ+GHSDAPIIENL +KRAFLE SGARCLITPCHL+H+W
Sbjct: 121 EPALGKGIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRW 180

Query: 215 LDDTTESCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDKAIVTGFYHERLQNQ 274
           L DT+ESCKLPFLHVGDCVA ELKEA LKPLE G +VRIGLLATD   VTG Y+ERLQNQ
Sbjct: 181 LSDTSESCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATD-TTVTGIYYERLQNQ 240

Query: 275 GFDVVLPDEATMKHIVVPAVEAFNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNL 334
           GFDV+LPDEATMKHIV+PAVEA NKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNL
Sbjct: 241 GFDVLLPDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNL 300

Query: 335 LPPDDPILKKCIDPMDALARAAIKWSRSTGNL 367
           LPPDDPILKKCIDPMDALARAAIKWSRST NL
Sbjct: 301 LPPDDPILKKCIDPMDALARAAIKWSRSTENL 331

[Close]

BLAST of Lcy03g013460 vs. ExPASy TrEMBL
Match: A0A1S3CMU2 (uncharacterized protein LOC103502741 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502741 PE=4 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 6.4e-157
Identity = 285/332 (85.84%), Postives = 301/332 (90.66%), Query Frame = 0


Query: 35  MMLDGGMAMPFYGLNCPAPIRRNANKRITHFRRRLNQYSSVQISSVIQTDENDNLPGSKK 94
           MML GGMAM FY   CPAP+RRNAN+ IT FRRR+N YSSVQISSV+QTD NDNLP SKK
Sbjct: 1   MMLHGGMAMHFYAPICPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKK 60

Query: 95  ISSSGKSLSKSRTPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQESIPFVVCS 154
           ISS GKSLSK+RTPKPLLVQPNTVGVIGGVSV STLLFLEKLVWWSLKDGQESIPFVVCS
Sbjct: 61  ISSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS 120

Query: 155 DPALGKGIFPLTPSSTFSASSSQHGHSDAPIIENLKQKRAFLEQSGARCLITPCHLSHKW 214
           +PALGKGI P+T   TFS  SSQ+GHSDAPIIENL +KRAFLE SGARCLITPCHL+H+W
Sbjct: 121 EPALGKGIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRW 180

Query: 215 LDDTTESCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDKAIVTGFYHERLQNQ 274
           L DT+ESCKLPFLHVGDCVA ELKEA LKPLE G +VRIGLLATD   VTG Y+ERLQNQ
Sbjct: 181 LSDTSESCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATD-TTVTGIYYERLQNQ 240

Query: 275 GFDVVLPDEATMKHIVVPAVEAFNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNL 334
           GFDV+LPDEATMKHIV+PAVEA NKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNL
Sbjct: 241 GFDVLLPDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNL 300

Query: 335 LPPDDPILKKCIDPMDALARAAIKWSRSTGNL 367
           LPPDDPILKKCIDPMDALARAAIKWSRST NL
Sbjct: 301 LPPDDPILKKCIDPMDALARAAIKWSRSTENL 331

[Close]

BLAST of Lcy03g013460 vs. ExPASy TrEMBL
Match: A0A5D3E266 (Amino-acid racemase isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00430 PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 1.2e-155
Identity = 284/332 (85.54%), Postives = 300/332 (90.36%), Query Frame = 0


Query: 35  MMLDGGMAMPFYGLNCPAPIRRNANKRITHFRRRLNQYSSVQISSVIQTDENDNLPGSKK 94
           MML GGMAM FY    PAP+RRNAN+ IT FRRR+N YSSVQISSV+QTD NDNLP SKK
Sbjct: 1   MMLHGGMAMHFYAPIFPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKK 60

Query: 95  ISSSGKSLSKSRTPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQESIPFVVCS 154
           ISS GKSLSK+RTPKPLLVQPNTVGVIGGVSV STLLFLEKLVWWSLKDGQESIPFVVCS
Sbjct: 61  ISSLGKSLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCS 120

Query: 155 DPALGKGIFPLTPSSTFSASSSQHGHSDAPIIENLKQKRAFLEQSGARCLITPCHLSHKW 214
           +PALGKGI P+T   TFS  SSQ+GHSDAPIIENL +KRAFLE SGARCLITPCHL+H+W
Sbjct: 121 EPALGKGIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRW 180

Query: 215 LDDTTESCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDKAIVTGFYHERLQNQ 274
           L DT+ESCKLPFLHVGDCVA ELKEA LKPLE G +VRIGLLATD   VTG Y+ERLQNQ
Sbjct: 181 LSDTSESCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATD-TTVTGIYYERLQNQ 240

Query: 275 GFDVVLPDEATMKHIVVPAVEAFNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNL 334
           GFDV+LPDEATMKHIV+PAVEA NKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNL
Sbjct: 241 GFDVLLPDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNL 300

Query: 335 LPPDDPILKKCIDPMDALARAAIKWSRSTGNL 367
           LPPDDPILKKCIDPMDALARAAIKWSRST NL
Sbjct: 301 LPPDDPILKKCIDPMDALARAAIKWSRSTENL 331

[Close]

BLAST of Lcy03g013460 vs. NCBI nr
Match: XP_038878952.1 (uncharacterized protein LOC120071036 [Benincasa hispida])

HSP 1 Score: 595.9 bits (1535), Expect = 2.4e-166
Identity = 297/335 (88.66%), Postives = 311/335 (92.84%), Query Frame = 0


Query: 36  MLDGGMAMPFYGLNCPAPIRRNANKRITHFRRRLNQYSSVQISSVIQTDENDNLPGSKKI 95
           MLDGGM   FY L CPAPIRRNAN+ IT FRRR+N YSSVQISSVIQTD NDNLPGSKKI
Sbjct: 1   MLDGGMTTSFYALTCPAPIRRNANEGITRFRRRINPYSSVQISSVIQTDANDNLPGSKKI 60

Query: 96  SSSGKSLSKSRTPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQESIPFVVCSD 155
           SSSGKSLSK+RTPKPLLVQP TVGVIGGVSV STLLFLEKLVWWS+KDGQESIPFVVCSD
Sbjct: 61  SSSGKSLSKTRTPKPLLVQPKTVGVIGGVSVFSTLLFLEKLVWWSMKDGQESIPFVVCSD 120

Query: 156 PALGKGIFPLTPSSTFSASSSQHGHSDAPIIENLKQKRAFLEQSGARCLITPCHLSHKWL 215
           PALGKGI PLT S TFS +SSQ+GHSD PIIENLK+KRAFLEQSGARCLITPCHL+H+WL
Sbjct: 121 PALGKGIPPLTSSCTFSTNSSQYGHSDDPIIENLKRKRAFLEQSGARCLITPCHLTHRWL 180

Query: 216 DDTTESCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDKAIVTGFYHERLQNQG 275
            DT+ESCKLPFLHVGDCVA ELKEAKLKPLE GSSVRIGLLATD A V GFYHERLQNQG
Sbjct: 181 GDTSESCKLPFLHVGDCVARELKEAKLKPLEGGSSVRIGLLATDTATVAGFYHERLQNQG 240

Query: 276 FDVVLPDEATMKHIVVPAVEAFNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 335
           FD++LPDEATM+HIV+PAVEA NKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLL
Sbjct: 241 FDILLPDEATMEHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 300

Query: 336 PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA 371
           PPDDPILKKCIDPMDALARAAIKWSRST NLHEKA
Sbjct: 301 PPDDPILKKCIDPMDALARAAIKWSRSTENLHEKA 335

[Close]

BLAST of Lcy03g013460 vs. NCBI nr
Match: XP_023006388.1 (uncharacterized protein LOC111499133 isoform X1 [Cucurbita maxima])

HSP 1 Score: 589.0 bits (1517), Expect = 2.9e-164
Identity = 296/335 (88.36%), Postives = 313/335 (93.43%), Query Frame = 0


Query: 36  MLDGGMAMPFYGLNCPAPIRRNANKRITHFRRRLNQYSSVQISSVIQTDENDNLPGSKKI 95
           MLDGGMAMPFY LNCPAP+RRNAN+ IT FRRRLN YSS+QI SV+QTDENDNLP SKKI
Sbjct: 1   MLDGGMAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKKI 60

Query: 96  SSSGKSLSKSRTPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQESIPFVVCSD 155
           SS+GKS+SK R PKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQ+SIPFVVCSD
Sbjct: 61  SSAGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSD 120

Query: 156 PALGKGIFPLTPSSTFSASSSQHGHSDAPIIENLKQKRAFLEQSGARCLITPCHLSHKWL 215
           PALGKGI PLT  +TF+A+SSQH  +DAPIIE LKQK  FLEQSGARCLITPCHLSH+WL
Sbjct: 121 PALGKGIPPLTSLTTFTANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWL 180

Query: 216 DDTTESCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDKAIVTGFYHERLQNQG 275
            DT  SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATD AIVTGFY ERLQNQG
Sbjct: 181 GDT--SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQG 240

Query: 276 FDVVLPDEATMKHIVVPAVEAFNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 335
           F+VVLPDEAT+KHI+VPAVEA NKRDQEGARNLLRIAVH+LLIRAVN+VILASDELLNLL
Sbjct: 241 FEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNLL 300

Query: 336 PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA 371
           PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA
Sbjct: 301 PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA 333

[Close]

BLAST of Lcy03g013460 vs. NCBI nr
Match: XP_023530993.1 (uncharacterized protein LOC111793383 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 588.2 bits (1515), Expect = 5.0e-164
Identity = 296/336 (88.10%), Postives = 312/336 (92.86%), Query Frame = 0


Query: 35  MMLDGGMAMPFYGLNCPAPIRRNANKRITHFRRRLNQYSSVQISSVIQTDENDNLPGSKK 94
           MMLDGGMAMPFY LNCPAP+RRNAN+ IT FRRRLN YSS+QI SV+QTDENDNLP SKK
Sbjct: 1   MMLDGGMAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKK 60

Query: 95  ISSSGKSLSKSRTPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQESIPFVVCS 154
           IS+ GKS+SK R PKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQ+SIPFVVCS
Sbjct: 61  ISTPGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCS 120

Query: 155 DPALGKGIFPLTPSSTFSASSSQHGHSDAPIIENLKQKRAFLEQSGARCLITPCHLSHKW 214
           DPALGKGI PLT  +TF A+SSQH  +DAPIIE LKQK  FLEQSGARCLITPCHLSH+W
Sbjct: 121 DPALGKGIPPLTSLTTFPANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRW 180

Query: 215 LDDTTESCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDKAIVTGFYHERLQNQ 274
           L DT  SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATD AIVTGFY ERLQNQ
Sbjct: 181 LGDT--SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQ 240

Query: 275 GFDVVLPDEATMKHIVVPAVEAFNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNL 334
           GF+VVLPDEAT+KHI+VPAVEA NKRDQEGARNLLRIAVH+LLIRAVN+VILASDELLNL
Sbjct: 241 GFEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNL 300

Query: 335 LPPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA 371
           LPPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA
Sbjct: 301 LPPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA 334

[Close]

BLAST of Lcy03g013460 vs. NCBI nr
Match: XP_022931647.1 (uncharacterized protein LOC111437803 isoform X1 [Cucurbita moschata])

HSP 1 Score: 586.6 bits (1511), Expect = 1.5e-163
Identity = 295/335 (88.06%), Postives = 311/335 (92.84%), Query Frame = 0


Query: 36  MLDGGMAMPFYGLNCPAPIRRNANKRITHFRRRLNQYSSVQISSVIQTDENDNLPGSKKI 95
           MLDGGMAMPFY LNCPAP+RRNAN+ IT FRRRLN YSS+QI SV+QTDENDNLP SKKI
Sbjct: 1   MLDGGMAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKKI 60

Query: 96  SSSGKSLSKSRTPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQESIPFVVCSD 155
           S+ GKS+SK R PKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQ+SIPFVVCSD
Sbjct: 61  STPGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSD 120

Query: 156 PALGKGIFPLTPSSTFSASSSQHGHSDAPIIENLKQKRAFLEQSGARCLITPCHLSHKWL 215
           PALGKGI PLT  +TF A+SSQH  +DAPIIE LKQK  FLEQSGARCLITPCHLSH+WL
Sbjct: 121 PALGKGIPPLTSLTTFPANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWL 180

Query: 216 DDTTESCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDKAIVTGFYHERLQNQG 275
            DT  SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATD AIVTGFY ERLQNQG
Sbjct: 181 SDT--SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQG 240

Query: 276 FDVVLPDEATMKHIVVPAVEAFNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 335
           F+VVLPDEAT+KHI+VPAVEA NKRDQEGARNLLRIAVH+LLIRAVN+VILASDELLNLL
Sbjct: 241 FEVVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNLL 300

Query: 336 PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA 371
           PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA
Sbjct: 301 PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA 333

[Close]

BLAST of Lcy03g013460 vs. NCBI nr
Match: KAG7021803.1 (hypothetical protein SDJN02_15531, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 579.7 bits (1493), Expect = 1.8e-161
Identity = 291/335 (86.87%), Postives = 309/335 (92.24%), Query Frame = 0


Query: 36  MLDGGMAMPFYGLNCPAPIRRNANKRITHFRRRLNQYSSVQISSVIQTDENDNLPGSKKI 95
           MLDGGMA+PFY LNCPAP+RRNAN+ IT FRRRLN YSS+QI SV+QTDENDNLP SKKI
Sbjct: 1   MLDGGMAVPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKKI 60

Query: 96  SSSGKSLSKSRTPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQESIPFVVCSD 155
           S+ GKS+SK R PKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQ+SIPFVVCSD
Sbjct: 61  STPGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSD 120

Query: 156 PALGKGIFPLTPSSTFSASSSQHGHSDAPIIENLKQKRAFLEQSGARCLITPCHLSHKWL 215
           PALGKGI PLT  +TF+ +SSQH   DAPIIE LKQK  FLEQSGARCLITPCHLSH+WL
Sbjct: 121 PALGKGIPPLTSLTTFTENSSQHAQIDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWL 180

Query: 216 DDTTESCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDKAIVTGFYHERLQNQG 275
            DT  SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATD AIVTGFY ERLQNQG
Sbjct: 181 GDT--SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQG 240

Query: 276 FDVVLPDEATMKHIVVPAVEAFNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLL 335
           F+VVLPD+AT+KHI+VPAVEA NKRDQEGARNLLRIAVH+LLIRAVN+VILASDE LNLL
Sbjct: 241 FEVVLPDDATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDEFLNLL 300

Query: 336 PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA 371
           PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA
Sbjct: 301 PPDDPILKKCIDPMDALARAAIKWSRSTGNLHEKA 333

[Close]

BLAST of Lcy03g013460 vs. TAIR 10
Match: AT1G15410.1 (aspartate-glutamate racemase family )

HSP 1 Score: 302.0 bits (772), Expect = 6.7e-82
Identity = 152/303 (50.17%), Postives = 217/303 (71.62%), Query Frame = 0


Query: 66  RRRLNQYSSVQISSV-IQTDENDNLPGSKK---ISSSGKSLSKSRTPKPLLVQPNTVGVI 125
           R RL++  ++  SSV +  DE+++LP  KK   +S   ++   S     LL Q NTVG+I
Sbjct: 25  RVRLSRVLAMPPSSVLLHMDESNDLPKPKKGFCLSEDSRNSLNSLPADSLLRQANTVGII 84

Query: 126 GGVSVISTLLFLEKLVWWSLKDGQESIPFVVCSDPALGKGIFPLTPSSTFSASSSQHGHS 185
           GGVS  STL F++KLV WS  DG+ S+PFV+CSDPAL K +     +S  S    +    
Sbjct: 85  GGVSTDSTLKFVKKLVDWSSNDGKSSLPFVLCSDPALNKELLLYEENSYPSLYHREESTP 144

Query: 186 DAP--IIENLKQKRAFLEQSGARCLITPCHLSHKWLDDTTESCKLPFLHVGDCVAMELKE 245
             P  I+ENL+ KR +LE+ GA+ ++ PCH++H W ++  E   +P LH+G+C+A EL+E
Sbjct: 145 VDPKLIVENLRNKRRYLERCGAKLILMPCHIAHIWYEEVCEGSLVPLLHMGECIAKELQE 204

Query: 246 AKLKPLEAGSSVRIGLLATDKAIVTGFYHERLQNQGFDVVLPDEATMKHIVVPAVEAFNK 305
           AK+KPLEAG+ +R+G++AT   +  GFY E+LQ+ GF+ VLPD+ATM+H V+P++EA  +
Sbjct: 205 AKMKPLEAGNPLRVGVMATSATLSAGFYQEKLQSNGFEAVLPDKATMEHTVIPSIEAMKR 264

Query: 306 RDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLLPPDDPILKKCIDPMDALARAAIKW 363
           +D EGARNLLRIA+ VLL++AVN+V+L SDE+ +LLP DDP+LKKC+DPMDALAR+AIKW
Sbjct: 265 KDMEGARNLLRIALQVLLVQAVNVVMLGSDEMRDLLPGDDPLLKKCVDPMDALARSAIKW 324

The following BLAST results are available for this feature:

BLAST of Lcy03g013460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O58403	2.6e-14	26.69	Aspartate racemase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JC...	[more]

BLAST of Lcy03g013460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L4S4	1.4e-164	88.36	uncharacterized protein LOC111499133 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EU92	7.0e-164	88.06	uncharacterized protein LOC111437803 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5A7TXR8	6.4e-157	85.84	Amino-acid racemase isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3CMU2	6.4e-157	85.84	uncharacterized protein LOC103502741 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3E266	1.2e-155	85.54	Amino-acid racemase isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of Lcy03g013460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878952.1	2.4e-166	88.66	uncharacterized protein LOC120071036 [Benincasa hispida]	[more]
XP_023006388.1	2.9e-164	88.36	uncharacterized protein LOC111499133 isoform X1 [Cucurbita maxima]	[more]
XP_023530993.1	5.0e-164	88.10	uncharacterized protein LOC111793383 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022931647.1	1.5e-163	88.06	uncharacterized protein LOC111437803 isoform X1 [Cucurbita moschata]	[more]
KAG7021803.1	1.8e-161	86.87	hypothetical protein SDJN02_15531, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Lcy03g013460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15410.1	6.7e-82	50.17	aspartate-glutamate racemase family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015942	Asp/Glu/hydantoin racemase	PFAM	PF01177	Asp_Glu_race	coord: 121..356 e-value: 2.3E-24 score: 86.4
None	No IPR available	GENE3D	3.40.50.1860		coord: 117..354 e-value: 1.0E-41 score: 145.1
None	No IPR available	GENE3D	3.40.50.1860		coord: 231..348 e-value: 1.0E-41 score: 145.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..108
None	No IPR available	PANTHER	PTHR21198	GLUTAMATE RACEMASE	coord: 36..366
None	No IPR available	PANTHER	PTHR21198:SF9	ASPARTATE RACEMASE	coord: 36..366
IPR001920	Asp/Glu racemase	SUPERFAMILY	53681	Aspartate/glutamate racemase	coord: 117..239
IPR001920	Asp/Glu racemase	SUPERFAMILY	53681	Aspartate/glutamate racemase	coord: 252..359

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g013460.1	Lcy03g013460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006807	nitrogen compound metabolic process
molecular_function	GO:0036361	racemase activity, acting on amino acids and derivatives
molecular_function	GO:0016855	racemase and epimerase activity, acting on amino acids and derivatives