Lcy03g012970 (gene) Sponge gourd (P93075) v1

Overview
NameLcy03g012970
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNase H domain-containing protein
LocationChr03: 46908783 .. 46909753 (+)
RNA-Seq ExpressionLcy03g012970
SyntenyLcy03g012970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGAGAGTACATGTCAATTACTGTTGAGCTAAGTTCGCTTTGGCTCACTATTGTGACTTGTGAGGTCCAATGGTTGGATTTTTTTTCCCCTTCTTCTGCTGTAATAAAAGAGTTAGGCTTATCCATATTTAATGTTCCTCTGATGACAAATTTATTCTTTATTATTCTTTTAAAAATTTAAAGTTCCTCTGGTGGAGCTGGTTGAAGGACAATTTGGACGAAGAGGAAATCACAAAAGGAGCAGTCATAATGTGGAGAATATGGAATTTCCGCAACCAATCAGCCAATTACCAGAATATGGGAGATGAAGCCCTCTATCAAAGCATCGATTTCAGCATAAAAGAGATTGAAGCATCTTACCTCAAGACTCATTCTTCCGGTAGAATTGGGAGCCAATTGAGTCAAGCTCCGAAGCAGCACCCGCCCCCCAACAGTTGGCTTCTGAAATCTGATGCTTCCTGGAACGCGAATTTGGGTTGTGGGGGTGTGGGTTGGGTGGTTCATGACTCGGAGGGATCCCTTGTCTGCGGTGGAAGAAAGAAAATCTCGAAGAATTGGGCAATCAAGACGTTGGAAGCAAAAGCCATGTTAGACGGGTTAAATCAAATTGCTGAGACCTGCAAGCGTCGATCCATCGCCATCGAAGCTCAGTCAGATGCCTTGGATATCATCAACATCCTCGCCGGAAAAACAGAGGATTTATCAGAGGTGAAATCCCTCACCGACCAAATCAAAGCCATCGCCTCTGATGTGCAAAATGTGGGTTTTAGTCATTGTAGTAGGGTTTTGAACACAGATGCGCACTGTGTTGCGAGATCGGCCATGGATTTGCCTTCCGTTGTAGGTGATCTCCATGGAAGCGTTTCTTCGCGGGAAGAGGGAGAAGTCTTTTGGGCTCCCTTTTTGCCTCCGTGGTTAATTCCCCTCATTAAGGAGGGTAGGTGTAAAACAGTTGGTTATTCTTAATGCAT

mRNA sequence

TCGAGAGTACATGTCAATTACTGTTGAGCTAAGTTCGCTTTGGCTCACTATTGTGACTTGTGAGGTCCAATGGTTGGATTTTTTTTCCCCTTCTTCTGCTGTAATAAAAGAGTTAGGCTTATCCATATTTAATGTTCCTCTGATGACAAATTTATTCTTTATTATTCTTTTAAAAATTTAAAGTTCCTCTGGTGGAGCTGGTTGAAGGACAATTTGGACGAAGAGGAAATCACAAAAGGAGCAGTCATAATGTGGAGAATATGGAATTTCCGCAACCAATCAGCCAATTACCAGAATATGGGAGATGAAGCCCTCTATCAAAGCATCGATTTCAGCATAAAAGAGATTGAAGCATCTTACCTCAAGACTCATTCTTCCGGTAGAATTGGGAGCCAATTGAGTCAAGCTCCGAAGCAGCACCCGCCCCCCAACAGTTGGCTTCTGAAATCTGATGCTTCCTGGAACGCGAATTTGGGTTGTGGGGGTGTGGGTTGGGTGGTTCATGACTCGGAGGGATCCCTTGTCTGCGGTGGAAGAAAGAAAATCTCGAAGAATTGGGCAATCAAGACGTTGGAAGCAAAAGCCATGTTAGACGGGTTAAATCAAATTGCTGAGACCTGCAAGCGTCGATCCATCGCCATCGAAGCTCAGTCAGATGCCTTGGATATCATCAACATCCTCGCCGGAAAAACAGAGGATTTATCAGAGGTGAAATCCCTCACCGACCAAATCAAAGCCATCGCCTCTGATGTGCAAAATGTGGGTTTTAGTCATTGTAGTAGGGTTTTGAACACAGATGCGCACTGTGTTGCGAGATCGGCCATGGATTTGCCTTCCGTTGTAGGTGATCTCCATGGAAGCGTTTCTTCGCGGGAAGAGGGAGAAGTCTTTTGGGCTCCCTTTTTGCCTCCGTGGTTAATTCCCCTCATTAAGGAGGGTAGGTGTAAAACAGTTGGTTATTCTTAATGCAT

Coding sequence (CDS)

ATGTGGAGAATATGGAATTTCCGCAACCAATCAGCCAATTACCAGAATATGGGAGATGAAGCCCTCTATCAAAGCATCGATTTCAGCATAAAAGAGATTGAAGCATCTTACCTCAAGACTCATTCTTCCGGTAGAATTGGGAGCCAATTGAGTCAAGCTCCGAAGCAGCACCCGCCCCCCAACAGTTGGCTTCTGAAATCTGATGCTTCCTGGAACGCGAATTTGGGTTGTGGGGGTGTGGGTTGGGTGGTTCATGACTCGGAGGGATCCCTTGTCTGCGGTGGAAGAAAGAAAATCTCGAAGAATTGGGCAATCAAGACGTTGGAAGCAAAAGCCATGTTAGACGGGTTAAATCAAATTGCTGAGACCTGCAAGCGTCGATCCATCGCCATCGAAGCTCAGTCAGATGCCTTGGATATCATCAACATCCTCGCCGGAAAAACAGAGGATTTATCAGAGGTGAAATCCCTCACCGACCAAATCAAAGCCATCGCCTCTGATGTGCAAAATGTGGGTTTTAGTCATTGTAGTAGGGTTTTGAACACAGATGCGCACTGTGTTGCGAGATCGGCCATGGATTTGCCTTCCGTTGTAGGTGATCTCCATGGAAGCGTTTCTTCGCGGGAAGAGGGAGAAGTCTTTTGGGCTCCCTTTTTGCCTCCGTGGTTAATTCCCCTCATTAAGGAGGGTAGGTGTAAAACAGTTGGTTATTCTTAA

Protein sequence

MWRIWNFRNQSANYQNMGDEALYQSIDFSIKEIEASYLKTHSSGRIGSQLSQAPKQHPPPNSWLLKSDASWNANLGCGGVGWVVHDSEGSLVCGGRKKISKNWAIKTLEAKAMLDGLNQIAETCKRRSIAIEAQSDALDIINILAGKTEDLSEVKSLTDQIKAIASDVQNVGFSHCSRVLNTDAHCVARSAMDLPSVVGDLHGSVSSREEGEVFWAPFLPPWLIPLIKEGRCKTVGYS
Homology
BLAST of Lcy03g012970 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 8.6e-14
Identity = 63/230 (27.39%), Postives = 107/230 (46.52%), Query Frame = 0

Query: 2   WRIWNFRNQSANYQNMGDEALYQSIDFSIKEI--EASYLKTHSSGRIGSQLSQAPKQHPP 61
           W IWN RN        G+ + + ++   + +   E+SY    S   +   L+   K  PP
Sbjct: 18  WVIWNHRNYVI---FRGEHSSFSTMIQQLTKFVTESSYQSETSLSMLHKTLNNKLKWEPP 77

Query: 62  P-NSWLLKSDASWNANLGCGGVGWVVHDSEGSLVCGGRKKISKNWAIKTLEAKAMLDGLN 121
           P + W L +DASW+ +   GG+GW++   +G +V  G + +     +K LEA A+L+GL 
Sbjct: 78  PMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACNNVKLLEASAILEGLR 137

Query: 122 QIAETCKRRSIAIEAQSDALDIINILAGKTEDLSEVKSLTDQIKAIASDVQNVGFSHCSR 181
            +      R + IE  +D+ ++ ++L  K EDL++   + ++I  +    + + F+   R
Sbjct: 138 NLTNLGVLRPLHIE--TDSAEVESLLNRKREDLTKTGWVVEEILNLRDSCEILAFAKVGR 197

Query: 182 VLNTDAHCVARSAMDLPSVVGDLHGSVSSREEGEVFWAPFLPPWLIPLIK 229
             N  AH +A+ A  L             RE   + W    P WL  L K
Sbjct: 198 ETNGCAHSLAQRASVL-------------RE--SMIWVDCFPNWLSILAK 227

BLAST of Lcy03g012970 vs. ExPASy TrEMBL
Match: A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 5.6e-13
Identity = 64/208 (30.77%), Postives = 103/208 (49.52%), Query Frame = 0

Query: 2   WRIWNFRNQS---------ANYQNMGDEALYQSI--DFSIKEIEASYLKTHSSGRIGSQL 61
           W+IW  RN+S          + Q + D  +  S   D ++K   A+    H   RIG   
Sbjct: 17  WQIWEMRNKSIFKGVHSETRDIQLVIDRYIINSAGRDTNLKGKSAN-KDLHLIRRIGDN- 76

Query: 62  SQAPKQHPPPNSWLLKSDASWNANLGCGGVGWVVHDSEGSLVCGGRKKISKNWAIKTLEA 121
           + A  + P  NSW L +DA+W A+   GG+GW++ D +G ++    + I     I  LE 
Sbjct: 77  TGARWKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKADCRIIRTERNITYLEV 136

Query: 122 KAMLDGLNQI-AETCK----RRSIAIEAQSDALDIINILAGKTEDLSEVKSLTDQIKAIA 181
            A+ +GL  I  E C+         I  +SD+L+ I++L  + +D +E+  L ++I  + 
Sbjct: 137 MAICEGLRAIRQEHCRPIQQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMM 196

Query: 182 SDVQNVGFSHCSRVLNTDAHCVARSAMD 194
            D++ V   H SR  N  AH +AR AM+
Sbjct: 197 EDMKIVSMRHISREANKVAHDLARRAME 222

BLAST of Lcy03g012970 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.8e-12
Identity = 57/203 (28.08%), Postives = 101/203 (49.75%), Query Frame = 0

Query: 2   WRIWNFRNQSANYQNMGDEALYQSIDFSIKEIEASYLKTHSSGRIGSQ----------LS 61
           W+IW  RN+S  ++ +  E     +      I ++   T+  G+  ++           +
Sbjct: 17  WQIWEMRNKSI-FKGVHPETRDIQLAIDRYIINSAGRNTNLKGKSTNKDLHLIRRIEDNT 76

Query: 62  QAPKQHPPPNSWLLKSDASWNANLGCGGVGWVVHDSEGSLVCGGRKKISKNWAIKTLEAK 121
            A  + P  NSW L ++A+W A+   GG+GW++ D +G ++    + I     I  LE  
Sbjct: 77  GAQWKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASCRIIRAERNITYLEVM 136

Query: 122 AMLDGLNQI-AETCKRRSIAIEAQSDALDIINILAGKTEDLSEVKSLTDQIKAIASDVQN 181
           A+ +GL  I  E C+     I  +SD+L+ I++L  + +D +E+  L ++I  +  D++ 
Sbjct: 137 AICEGLRAIRQEHCR----PIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMKDMEI 196

Query: 182 VGFSHCSRVLNTDAHCVARSAMD 194
           V   H SR  N  AH +AR AM+
Sbjct: 197 VSMRHISREANKVAHGLARRAME 214

BLAST of Lcy03g012970 vs. ExPASy TrEMBL
Match: A0A803PA46 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.1e-08
Identity = 62/200 (31.00%), Postives = 86/200 (43.00%), Query Frame = 0

Query: 2    WRIWNFRNQSANYQNMGDEALYQSIDFSIKEIEASYLKTHSSGRIGSQLSQAPKQHPPPN 61
            W IW+ RN++   Q        Q  + +I  +  S+L  + +    SQ SQ P   PPP 
Sbjct: 1132 WLIWHNRNRALRNQ-------AQDQNHAIPSLANSFLAEYKTSSQASQ-SQGPVTRPPPV 1191

Query: 62   S-W--------LLKSDASWNANLGCGGVGWVVHDSEGSLVCGGRKKISKNWAIKTLEAKA 121
            S W         L +DA+   N    G G V+ +SEG +V            + TLEAKA
Sbjct: 1192 SVWEPPPNGCLKLNTDAAIPKNSAKAGFGGVIRNSEGQVVAAVANSHLGGGDVATLEAKA 1251

Query: 122  MLDGLNQIAETCKRRSIAIEAQSDALDIINILAGKTEDLSEVKSLTDQIKAIASDVQNVG 181
            +L  +N   E C       + ++D   I + L    EDLS    +  QIK   S   N  
Sbjct: 1252 LLTSINWCIEEC---FPVHQVETDCKTITDALKSTKEDLSLFGDIICQIKEALSLFSNAR 1311

Query: 182  FSHCSRVLNTDAHCVARSAM 193
             SH SR  N  AH  A+ A+
Sbjct: 1312 VSHISRSANAMAHHFAKWAV 1320

BLAST of Lcy03g012970 vs. ExPASy TrEMBL
Match: A0A6J1D5W1 (uncharacterized protein LOC111017329 OS=Momordica charantia OX=3673 GN=LOC111017329 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 5.4e-08
Identity = 38/135 (28.15%), Postives = 71/135 (52.59%), Query Frame = 0

Query: 59  PPNSWLLKSDASWNANLGCGGVGWVVHDSEGSLVCGGRKKISKNWAIKTLEAKAMLDGLN 118
           P N W L +DA+W+AN G GG+GW++ + +  +   G + I+    I  LE  A+  G+ 
Sbjct: 9   PDNFWKLNTDAAWHANQGVGGLGWIIRNEKREIKKAGGQTITDARDITYLELMAIWLGIE 68

Query: 119 QIAETCKRRSIAIEAQSDALDIINILAGKTEDLSEVKSLTDQIKAIASDVQNVGFSHCSR 178
            +  +    S+++  +S++L+ I+++ G  ++++E+  L   IK      +   F H  R
Sbjct: 69  AVVSS---SSVSLIIESESLEAIHLIQGIQQNVTEILWLVQDIKNFGERARLKRFQHVQR 128

Query: 179 VLNTDAHCVARSAMD 194
             N+ A  +A  A D
Sbjct: 129 DGNSVAQEIANRAAD 140

BLAST of Lcy03g012970 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia])

HSP 1 Score: 87.4 bits (215), Expect = 1.8e-13
Identity = 63/230 (27.39%), Postives = 107/230 (46.52%), Query Frame = 0

Query: 2   WRIWNFRNQSANYQNMGDEALYQSIDFSIKEI--EASYLKTHSSGRIGSQLSQAPKQHPP 61
           W IWN RN        G+ + + ++   + +   E+SY    S   +   L+   K  PP
Sbjct: 18  WVIWNHRNYVI---FRGEHSSFSTMIQQLTKFVTESSYQSETSLSMLHKTLNNKLKWEPP 77

Query: 62  P-NSWLLKSDASWNANLGCGGVGWVVHDSEGSLVCGGRKKISKNWAIKTLEAKAMLDGLN 121
           P + W L +DASW+ +   GG+GW++   +G +V  G + +     +K LEA A+L+GL 
Sbjct: 78  PMHIWTLNADASWSDSTHRGGIGWIIRSWDGDIVLAGNRFVEACNNVKLLEASAILEGLR 137

Query: 122 QIAETCKRRSIAIEAQSDALDIINILAGKTEDLSEVKSLTDQIKAIASDVQNVGFSHCSR 181
            +      R + IE  +D+ ++ ++L  K EDL++   + ++I  +    + + F+   R
Sbjct: 138 NLTNLGVLRPLHIE--TDSAEVESLLNRKREDLTKTGWVVEEILNLRDSCEILAFAKVGR 197

Query: 182 VLNTDAHCVARSAMDLPSVVGDLHGSVSSREEGEVFWAPFLPPWLIPLIK 229
             N  AH +A+ A  L             RE   + W    P WL  L K
Sbjct: 198 ETNGCAHSLAQRASVL-------------RE--SMIWVDCFPNWLSILAK 227

BLAST of Lcy03g012970 vs. NCBI nr
Match: XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia])

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-12
Identity = 64/208 (30.77%), Postives = 103/208 (49.52%), Query Frame = 0

Query: 2   WRIWNFRNQS---------ANYQNMGDEALYQSI--DFSIKEIEASYLKTHSSGRIGSQL 61
           W+IW  RN+S          + Q + D  +  S   D ++K   A+    H   RIG   
Sbjct: 17  WQIWEMRNKSIFKGVHSETRDIQLVIDRYIINSAGRDTNLKGKSAN-KDLHLIRRIGDN- 76

Query: 62  SQAPKQHPPPNSWLLKSDASWNANLGCGGVGWVVHDSEGSLVCGGRKKISKNWAIKTLEA 121
           + A  + P  NSW L +DA+W A+   GG+GW++ D +G ++    + I     I  LE 
Sbjct: 77  TGARWKPPTSNSWKLNTDAAWRADTNTGGIGWILRDEKGEVIKADCRIIRTERNITYLEV 136

Query: 122 KAMLDGLNQI-AETCK----RRSIAIEAQSDALDIINILAGKTEDLSEVKSLTDQIKAIA 181
            A+ +GL  I  E C+         I  +SD+L+ I++L  + +D +E+  L ++I  + 
Sbjct: 137 MAICEGLRAIRQEHCRPIQQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMM 196

Query: 182 SDVQNVGFSHCSRVLNTDAHCVARSAMD 194
            D++ V   H SR  N  AH +AR AM+
Sbjct: 197 EDMKIVSMRHISREANKVAHDLARRAME 222

BLAST of Lcy03g012970 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia])

HSP 1 Score: 82.4 bits (202), Expect = 5.7e-12
Identity = 57/203 (28.08%), Postives = 101/203 (49.75%), Query Frame = 0

Query: 2   WRIWNFRNQSANYQNMGDEALYQSIDFSIKEIEASYLKTHSSGRIGSQ----------LS 61
           W+IW  RN+S  ++ +  E     +      I ++   T+  G+  ++           +
Sbjct: 17  WQIWEMRNKSI-FKGVHPETRDIQLAIDRYIINSAGRNTNLKGKSTNKDLHLIRRIEDNT 76

Query: 62  QAPKQHPPPNSWLLKSDASWNANLGCGGVGWVVHDSEGSLVCGGRKKISKNWAIKTLEAK 121
            A  + P  NSW L ++A+W A+   GG+GW++ D +G ++    + I     I  LE  
Sbjct: 77  GAQWKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASCRIIRAERNITYLEVM 136

Query: 122 AMLDGLNQI-AETCKRRSIAIEAQSDALDIINILAGKTEDLSEVKSLTDQIKAIASDVQN 181
           A+ +GL  I  E C+     I  +SD+L+ I++L  + +D +E+  L ++I  +  D++ 
Sbjct: 137 AICEGLRAIRQEHCR----PIHLESDSLEAIHLLHRQCQDQTEIIWLLEEIWQMMKDMEI 196

Query: 182 VGFSHCSRVLNTDAHCVARSAMD 194
           V   H SR  N  AH +AR AM+
Sbjct: 197 VSMRHISREANKVAHGLARRAME 214

BLAST of Lcy03g012970 vs. NCBI nr
Match: XP_024041966.1 (uncharacterized protein LOC112099096 [Citrus clementina])

HSP 1 Score: 72.0 bits (175), Expect = 7.7e-09
Identity = 62/208 (29.81%), Postives = 100/208 (48.08%), Query Frame = 0

Query: 1   MWRIWNFRNQ---SANYQN-----MGDEALYQSIDFSIKEIEASYLKTHSSGRIGSQLSQ 60
           +W IWN RN+       +N        EA+ +S    I+++E +Y KT  +     Q S 
Sbjct: 48  LWAIWNARNKWLFEGKQENPLRVVANAEAIVESFK-KIRQLEIAY-KTKRNAERQKQWS- 107

Query: 61  APKQHPPPNSW-LLKSDASWNANLGCGGVGWVVHDSEGSLVCGGRKKISKNWAIKTLEAK 120
                PPPN W  +  DA+ +      G+G VV DS+G+      K +    ++   EA 
Sbjct: 108 -----PPPNGWQKVNVDAAVDVENQMAGLGVVVRDSDGNCRAAAIKSLRLPGSVAMAEAT 167

Query: 121 AMLDGLNQIAETCKRRSIAIEA-QSDALDIINILAGKTEDLSEVKSLTDQIKAIASDVQN 180
           AM  GL Q+AE   + +I     +SD+L++I+++  K+  L+E+  L   I+    + QN
Sbjct: 168 AMEWGL-QVAE---KANITFRIFESDSLEVIDLINKKSSSLTEIGWLISDIQENLQNFQN 227

Query: 181 VGFSHCSRVLNTDAHCVARSAMDLPSVV 199
               HC R  N  AH +A+ A+    +V
Sbjct: 228 FKAQHCPRDCNYAAHSLAKLALQKKEIV 243

BLAST of Lcy03g012970 vs. NCBI nr
Match: XP_030487551.1 (uncharacterized protein LOC115704487 [Cannabis sativa])

HSP 1 Score: 71.2 bits (173), Expect = 1.3e-08
Identity = 53/172 (30.81%), Postives = 77/172 (44.77%), Query Frame = 0

Query: 56  QHPPPNSWLLKSDASWNANLGCGGVGWVVHDSEGSLVCGGRKKISKNWAIKTLEAKAMLD 115
           Q PP +S+ L  DA+ +A     GVG VV DS GS++    K +  N+A   +EAKA+  
Sbjct: 220 QPPPHSSFKLNVDAAVDAQRHIIGVGAVVRDSTGSVLAAMSKPLVGNFASHEMEAKALFH 279

Query: 116 GLNQIAETCKRRSIAIEAQSDALDIINILAGKTEDLSEVKSLTDQIKAIASDVQNVGFSH 175
            +N I +           ++DAL + N L      +S  K+L   I  + S + NV   H
Sbjct: 280 NINWILQL---EVPITHIETDALMVSNALTVSCNAISSFKNLIVDISCLLSSLPNVSICH 339

Query: 176 CSRVLNTDAHCVARSAMDLPSVVGDLHGSVSSREEGEVFWAPFLPPWLIPLI 228
             R  N  AH +AR A+ L               E   FW   +PP +  +I
Sbjct: 340 VKRNANIAAHGLARYALGL---------------EEACFWMGIIPPLIYDVI 373

BLAST of Lcy03g012970 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 50.1 bits (118), Expect = 2.9e-06
Identity = 49/219 (22.37%), Postives = 93/219 (42.47%), Query Frame = 0

Query: 1   MWRIWNFRNQSANYQNMGDEALYQSIDFSIKEIEASYLKTHSSGRIGSQL---------- 60
           +WR+W  RN          E +++  +F+ +E+           RI ++           
Sbjct: 364 LWRLWKNRN----------ELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVN 423

Query: 61  -SQAPKQHPPPNSWL-LKSDASWNANLGCGGVGWVVHDSEGSLVCGGRKKISKNWAIKTL 120
            S   +  PPP+ W+   +DA+WN +    G+GWV+ + +G +   G + + K  ++   
Sbjct: 424 RSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEA 483

Query: 121 EAKAMLDGLNQIAETCKRRSIAIEAQSDALDIINILAGKTEDLSEVKSLTDQIKAIASDV 180
           E +AM   +  ++   + +   +  +SD+  +I IL    E    +K     ++ + S  
Sbjct: 484 ELEAMRWAVLSLS---RFQYNYVIFESDSQVLIEIL-NNDEIWPSLKPTIQDLQRLLSQF 543

Query: 181 QNVGFSHCSRVLNTDAHCVARSAMDLPSVVGDLHGSVSS 208
             V F    R  NT A  VAR ++   +    L+  V S
Sbjct: 544 TEVKFVFIPREGNTLAERVARESLSFLNYDPKLYSIVPS 568

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DNV98.6e-1427.39uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DSV15.6e-1330.77uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1CP262.8e-1228.08uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A803PA464.1e-0831.00Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A6J1D5W15.4e-0828.15uncharacterized protein LOC111017329 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
Match NameE-valueIdentityDescription
XP_022155262.11.8e-1327.39uncharacterized protein LOC111022403 [Momordica charantia][more]
XP_022156777.11.2e-1230.77uncharacterized protein LOC111023608 [Momordica charantia][more]
XP_022143535.15.7e-1228.08uncharacterized protein LOC111013412 [Momordica charantia][more]
XP_024041966.17.7e-0929.81uncharacterized protein LOC112099096 [Citrus clementina][more]
XP_030487551.11.3e-0830.81uncharacterized protein LOC115704487 [Cannabis sativa][more]
Match NameE-valueIdentityDescription
AT4G29090.12.9e-0622.37Ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 67..191
e-value: 6.8E-18
score: 64.7
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 63..196
e-value: 1.3E-11
score: 46.6
NoneNo IPR availablePANTHERPTHR33033POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 55..193
NoneNo IPR availablePANTHERPTHR33033:SF67SUBFAMILY NOT NAMEDcoord: 55..193
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 65..189
e-value: 2.15131E-13
score: 62.7168
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 65..196

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy03g012970.1Lcy03g012970.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity