Lcy03g011990 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g011990
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	MYB transcription factor
Location	Chr03: 45991028 .. 45992802 (+)
RNA-Seq Expression	Lcy03g011990
Synteny	Lcy03g011990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGAGTTTCAATTTGTCCGATTAGGAAGCTGCAGCCATGGCGGGCGTTTCTCTCTCTGAGGTCTAATCTCTCTGTCTGTTTCTCTCTGTGAATCGCCATGGGAAGAGCTCCTTGCTGCGACAAAGCCACTGTTAAGAGAGGCCCATGGTCTCCTCAAGAAGACGCCACTCTCACAAATTTCATTCACAAACATGGCACTGCTGGCAACTGGATCGCTCTCCCTCGCAAAGCTGGTTATCATTCCACTTCTCTCTCTCATTATGCTTATTTTTTCGTGTCAAAAGTATCGATAAAAAGATTAAATTTTGTGCAACCCTTCAACTTAAACTTTTGGGTTCCATAACATCTCGAAAGCTTTTGAATTCGGTAGTGATTGAGTCGTCTTTTTTAGGACTCAATCGCTGTGGCAAGAGCTGTCGTCTGAGGTGGCTGAATTATCTACGACCAGACATCAAACATGGCGGCTTCACCCCGGAGGAAGACAACGTTATTTTCACTCTCTATTCTACCATCGGAAGTAGGCAAGTTCTTCATCCATTCTTTATTTTTGTTGTGTTTTTCAAAAAGAATATGAATTAAAGATTAAATTTATCCTAATTTTAACCGTTTAAAATTTTAAATTTAGTGGGGTAATTTTGTAGTTAAATTATTGAGCTGTGACTTGAAGAAATACTGCATTCAAAATTTTGTAATTAACTATCATTGACTCTCTCAATTAATATTATAATTAATTATCTTTTCAAAAAAAAAATATATTATAATTAATTATTGGGTTTTTTTGTTCATTTCCAACCTTCAATAACAGTAAGAAAGTTCGAAAATATAAATGCAAAATTAAAAAATTTTGAGCTTAGCGATGAATGTGGGAAAATTATTAGTGGTTCCTCGGTGTAATGAGGTTCACTTTTTTAAACCGACGGATGTAAATTTTTAAATTTGTCTGTCCCTGATAATTGTTACACCTAAAAATTTCATTCAGGTGGGCTGTAATTGCATCACAATTACCGGGGAGAACCGACAACGACGTCAAGAATCACTGGAACACCAAGTTGAAGAAGAAGTTCAATTCATTTTCCGGGCCGCCGAATCCGACGATCACCGCCACCGCAAGCCACCACAATGCCACTACCAACGCCACATTTCCGGCCAACCCGCCGCCGTTTTCCGCCACCGCAAGGCTCGAGGAAGAACATTACAACACCAACTTCATGTTTTCATGTCCATTTGATTTCAAAAACTCATTAAATTTCGACCCACAAGATCAATTTCCGGTTTTGAATCCAAATGAATTATCCACTTCGTCCTCAACTTCAATATCGGCCGTCGAGCAAAACCATCTCCCATTTTCCGGCAACGGCGGCGGCTCCGACGACGGCGAAATTCTACTGAGCTATGGATTTTATCAGTACCCATATGATGAAGATGTTGTGGAAGGATTGGATGTGAGTAATATGGGATAAAATTAATTAATGAATTAATTAATAATTAGAGTGGGGGAATGGAATGGAGGAGGACTTGGTCAAAAAGTTTGTTTGAGTTTGATGATTCATTATCATATGGTTTCATTTGGTGTAAGTTGATGAAGTCAGCTGAGACTTTGTTTGTTTCTGACTACTGGTCAGTGGTCACAAACCTCGTGTTTGTTTTACCCTTTTTTTTTTGTTTTTTAAATTTATTTAAATTTGACTACTAGCTCAAAATGGTCATGTTTCCCTTTTGAACTGCTACAAAAAAGTTGCTCTTTTTTCTCCACAATAATATTAATGTGATTCAGT

mRNA sequence

TCGAGTTTCAATTTGTCCGATTAGGAAGCTGCAGCCATGGCGGGCGTTTCTCTCTCTGAGGTCTAATCTCTCTGTCTGTTTCTCTCTGTGAATCGCCATGGGAAGAGCTCCTTGCTGCGACAAAGCCACTGTTAAGAGAGGCCCATGGTCTCCTCAAGAAGACGCCACTCTCACAAATTTCATTCACAAACATGGCACTGCTGGCAACTGGATCGCTCTCCCTCGCAAAGCTGGTTATCATTCCACTTCTCTCTCTCATTATGCTTATTTTTTCGTGTCAAAAGTATCGATAAAAAGATTAAATTTTGTGCAACCCTTCAACTTAAACTTTTGGGTTCCATAACATCTCGAAAGCTTTTGAATTCGGTAGTGATTGAGTCGTCTTTTTTAGGACTCAATCGCTGTGGCAAGAGCTGTCGTCTGAGGTGGCTGAATTATCTACGACCAGACATCAAACATGGCGGCTTCACCCCGGAGGAAGACAACGTTATTTTCACTCTCTATTCTACCATCGGAAGTAGGTGGGCTGTAATTGCATCACAATTACCGGGGAGAACCGACAACGACGTCAAGAATCACTGGAACACCAAGTTGAAGAAGAAGTTCAATTCATTTTCCGGGCCGCCGAATCCGACGATCACCGCCACCGCAAGCCACCACAATGCCACTACCAACGCCACATTTCCGGCCAACCCGCCGCCGTTTTCCGCCACCGCAAGGCTCGAGGAAGAACATTACAACACCAACTTCATGTTTTCATGTCCATTTGATTTCAAAAACTCATTAAATTTCGACCCACAAGATCAATTTCCGGTTTTGAATCCAAATGAATTATCCACTTCGTCCTCAACTTCAATATCGGCCGTCGAGCAAAACCATCTCCCATTTTCCGGCAACGGCGGCGGCTCCGACGACGGCGAAATTCTACTGAGCTATGGATTTTATCAGTACCCATATGATGAAGATGTTGTGGAAGGATTGGATGTGAGTAATATGGGATAAAATTAATTAATGAATTAATTAATAATTAGAGTGGGGGAATGGAATGGAGGAGGACTTGGTCAAAAAGTTTGTTTGAGTTTGATGATTCATTATCATATGGTTTCATTTGGTGTAAGTTGATGAAGTCAGCTGAGACTTTGTTTGTTTCTGACTACTGGTCAGTGGTCACAAACCTCGTGTTTGTTTTACCCTTTTTTTTTTGTTTTTTAAATTTATTTAAATTTGACTACTAGCTCAAAATGGTCATGTTTCCCTTTTGAACTGCTACAAAAAAGTTGCTCTTTTTTCTCCACAATAATATTAATGTGATTCAGT

Coding sequence (CDS)

ATGGTCTCCTCAAGAAGACGCCACTCTCACAAATTTCATTCACAAACATGGCACTGCTGGCAACTGGATCGCTCTCCCTCGCAAAGCTGGTTATCATTCCACTTCTCTCTCTCATTATGCTTATTTTTTCGTGTCAAAAGTATCGATAAAAAGATTAAATTTTGTGCAACCCTTCAACTTAAACTTTTGGGTTCCATAACATCTCGAAAGCTTTTGAATTCGGTAGTGATTGAGTCGTCTTTTTTAGGACTCAATCGCTGTGGCAAGAGCTGTCGTCTGAGGTGGCTGAATTATCTACGACCAGACATCAAACATGGCGGCTTCACCCCGGAGGAAGACAACGTTATTTTCACTCTCTATTCTACCATCGGAAGTAGGTGGGCTGTAATTGCATCACAATTACCGGGGAGAACCGACAACGACGTCAAGAATCACTGGAACACCAAGTTGAAGAAGAAGTTCAATTCATTTTCCGGGCCGCCGAATCCGACGATCACCGCCACCGCAAGCCACCACAATGCCACTACCAACGCCACATTTCCGGCCAACCCGCCGCCGTTTTCCGCCACCGCAAGGCTCGAGGAAGAACATTACAACACCAACTTCATGTTTTCATGTCCATTTGATTTCAAAAACTCATTAAATTTCGACCCACAAGATCAATTTCCGGTTTTGAATCCAAATGAATTATCCACTTCGTCCTCAACTTCAATATCGGCCGTCGAGCAAAACCATCTCCCATTTTCCGGCAACGGCGGCGGCTCCGACGACGGCGAAATTCTACTGAGCTATGGATTTTATCAGTACCCATATGATGAAGATGTTGTGGAAGGATTGGATGTGAGTAATATGGGATAA

Protein sequence

MVSSRRRHSHKFHSQTWHCWQLDRSPSQSWLSFHFSLSLCLFFRVKSIDKKIKFCATLQLKLLGSITSRKLLNSVVIESSFLGLNRCGKSCRLRWLNYLRPDIKHGGFTPEEDNVIFTLYSTIGSRWAVIASQLPGRTDNDVKNHWNTKLKKKFNSFSGPPNPTITATASHHNATTNATFPANPPPFSATARLEEEHYNTNFMFSCPFDFKNSLNFDPQDQFPVLNPNELSTSSSTSISAVEQNHLPFSGNGGGSDDGEILLSYGFYQYPYDEDVVEGLDVSNMG

Homology

[Close]

BLAST of Lcy03g011990 vs. ExPASy Swiss-Prot
Match: F4JSU0 (Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.1e-31
Identity = 58/78 (74.36%), Postives = 69/78 (88.46%), Query Frame = 0


Query: 82  LGLNRCGKSCRLRWLNYLRPDIKHGGFTPEEDNVIFTLYSTIGSRWAVIASQLPGRTDND 141
           +G+ RCGKSCRLRWLNYLRP++KHGGFT EED +I +LY TIGSRW++IASQLPGRTDND
Sbjct: 45  IGIKRCGKSCRLRWLNYLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDND 104

Query: 142 VKNHWNTKLKKKFNSFSG 160
           +KN+WNT+LKKK  S  G
Sbjct: 105 IKNYWNTRLKKKLLSKQG 122

[Close]

BLAST of Lcy03g011990 vs. ExPASy Swiss-Prot
Match: Q9M2Y9 (Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.9e-31
Identity = 56/72 (77.78%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 82  LGLNRCGKSCRLRWLNYLRPDIKHGGFTPEEDNVIFTLYSTIGSRWAVIASQLPGRTDND 141
           +GL RCGKSCRLRWLNYLRP+IKHGGF+ EE+N+I +LY TIGSRW++IA+QLPGRTDND
Sbjct: 45  IGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDND 104

Query: 142 VKNHWNTKLKKK 154
           +KN+WNT+LKKK
Sbjct: 105 IKNYWNTRLKKK 116

[Close]

BLAST of Lcy03g011990 vs. ExPASy Swiss-Prot
Match: Q9FKL2 (Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.9e-31
Identity = 64/110 (58.18%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 82  LGLNRCGKSCRLRWLNYLRPDIKHGGFTPEEDNVIFTLYSTIGSRWAVIASQLPGRTDND 141
           +GL RCGKSCRLRWLNYLRP+IKHGGF+ EED +I +LY +IGSRW++IA+QLPGRTDND
Sbjct: 45  IGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDND 104

Query: 142 VKNHWNTKLKKKFNSFSGPPNPTITATASHHNATTNATFPANPPPFSATA 192
           +KN+WNTKLKKK        N   + T S  N  +N     +P   S +A
Sbjct: 105 IKNYWNTKLKKKLLGRQKQMNRQDSITDSTENNLSNNNNNKSPQNLSNSA 154

[Close]

BLAST of Lcy03g011990 vs. ExPASy Swiss-Prot
Match: Q9SJL7 (Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.9e-31
Identity = 62/112 (55.36%), Postives = 81/112 (72.32%), Query Frame = 0


Query: 83  GLNRCGKSCRLRWLNYLRPDIKHGGFTPEEDNVIFTLYSTIGSRWAVIASQLPGRTDNDV 142
           GL RCGKSCRLRWLNYLRP+I+HG FT EEDN+I++L+++IGSRW+VIA+ L GRTDND+
Sbjct: 46  GLRRCGKSCRLRWLNYLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDI 105

Query: 143 KNHWNTKLKKKFNSFSGPP----------NPTITATASHHNATTNATFPANP 185
           KN+WNTKLKKK  +   PP          + + + ++S H    N+  P NP
Sbjct: 106 KNYWNTKLKKKLIATMAPPPHHHLAIATSSSSASPSSSSHYNMINSLLPYNP 157

[Close]

BLAST of Lcy03g011990 vs. ExPASy Swiss-Prot
Match: Q9FG68 (Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.7e-29
Identity = 58/102 (56.86%), Postives = 77/102 (75.49%), Query Frame = 0


Query: 83  GLNRCGKSCRLRWLNYLRPDIKHGGFTPEEDNVIFTLYSTIGSRWAVIASQLPGRTDNDV 142
           GL RCGKSCRLRWLNYLRP+IKHG F+ EED +IF+L++ IGSRW++IA+ LPGRTDND+
Sbjct: 46  GLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDI 105

Query: 143 KNHWNTKLKKKFNSFSGPPNPTITATASHHNATTNATFPANP 185
           KN+WNTKL+KK  S S   + +  A+   +  + +   P +P
Sbjct: 106 KNYWNTKLRKKLLSSSSDSSSSAMASPYLNPISQDVKRPTSP 147

[Close]

BLAST of Lcy03g011990 vs. ExPASy TrEMBL
Match: A0A6J1F5Y4 (transcription factor MYB36-like OS=Cucurbita moschata OX=3662 GN=LOC111441129 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.6e-67
Identity = 145/203 (71.43%), Postives = 158/203 (77.83%), Query Frame = 0


Query: 83  GLNRCGKSCRLRWLNYLRPDIKHGGFTPEEDNVIFTLYSTIGSRWAVIASQLPGRTDNDV 142
           GLNRCGKSCRLRWLNYLRPDIKHGGFT EEDN+I TLYST+GSRWAVIASQLPGRTDNDV
Sbjct: 46  GLNRCGKSCRLRWLNYLRPDIKHGGFTLEEDNLICTLYSTLGSRWAVIASQLPGRTDNDV 105

Query: 143 KNHWNTKLKKKFNSFSGPPNPTITATASHHNATTNATFPANPPPFSATA---RLEEEHYN 202
           KNHWNTKLKKKFNSFS  P PTI A A+  NA TN  FPAN PP+SA A   RL+E+  +
Sbjct: 106 KNHWNTKLKKKFNSFSERPAPTI-AAATQQNAITNMAFPANAPPYSAAADWIRLDEQ-MD 165

Query: 203 TNFMFS-CPFDFKNSLNFDPQDQFPVL-NPNELSTSSSTSISAVEQNHLPFSGNGGGSDD 262
            N MF+   FDFK+    DP+DQFP+L NP ELSTSSS S   +EQN LPF GN      
Sbjct: 166 GNLMFADANFDFKH----DPEDQFPMLWNPQELSTSSSNSSLPIEQNQLPFGGNA----- 225

Query: 263 GEILLSYGFYQYPYDEDVVEGLD 281
           GE LLSYGFYQYPY  DV+EGLD
Sbjct: 226 GEALLSYGFYQYPYG-DVMEGLD 236

[Close]

BLAST of Lcy03g011990 vs. ExPASy TrEMBL
Match: A0A6J1KT76 (transcription factor RAX3-like OS=Cucurbita maxima OX=3661 GN=LOC111498442 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 8.9e-66
Identity = 142/203 (69.95%), Postives = 156/203 (76.85%), Query Frame = 0


Query: 83  GLNRCGKSCRLRWLNYLRPDIKHGGFTPEEDNVIFTLYSTIGSRWAVIASQLPGRTDNDV 142
           GLNRCGKSCRLRWLNYLRPDIKHGGFT EEDN+I TLYST+GSRWAVIASQLPGRTDNDV
Sbjct: 46  GLNRCGKSCRLRWLNYLRPDIKHGGFTLEEDNLICTLYSTLGSRWAVIASQLPGRTDNDV 105

Query: 143 KNHWNTKLKKKFNSFSGPPNPTITATASHHNATTNATFPANPPPFSATA---RLEEEHYN 202
           KNHWNTKLKKKFNSFS    PTI A  +  NA TN  FPAN PP+SA A   R +E+  +
Sbjct: 106 KNHWNTKLKKKFNSFSERSAPTI-AAVTQQNAITNMAFPANAPPYSAAADWLRFDEQ-MD 165

Query: 203 TNFMFS-CPFDFKNSLNFDPQDQFPVL-NPNELSTSSSTSISAVEQNHLPFSGNGGGSDD 262
            N MF+   FDFK+    DP+DQFP+L NP ELSTSSS S   VEQN +PF GN     D
Sbjct: 166 GNLMFADANFDFKH----DPEDQFPMLWNPQELSTSSSNSSLPVEQNQVPFGGN-----D 225

Query: 263 GEILLSYGFYQYPYDEDVVEGLD 281
           GE +LSYGFYQYPY  DV+EGLD
Sbjct: 226 GETVLSYGFYQYPYG-DVMEGLD 236

[Close]

BLAST of Lcy03g011990 vs. ExPASy TrEMBL
Match: A0A6J1CVC2 (transcription factor RAX2-like OS=Momordica charantia OX=3673 GN=LOC111014545 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 1.7e-64
Identity = 135/206 (65.53%), Postives = 148/206 (71.84%), Query Frame = 0


Query: 83  GLNRCGKSCRLRWLNYLRPDIKHGGFTPEEDNVIFTLYSTIGSRWAVIASQLPGRTDNDV 142
           GLNRCGKSCRLRWLNYLRPDIKHG FT EED+VI TLYS+IGSRWAVIASQLPGRTDNDV
Sbjct: 46  GLNRCGKSCRLRWLNYLRPDIKHGSFTEEEDSVICTLYSSIGSRWAVIASQLPGRTDNDV 105

Query: 143 KNHWNTKLKKKFNSFSGPPNPTITATAS-----HHNATTNATFPANPPPFSATARLEEEH 202
           KNHWNTKLKKKFNS S  PNPT+ A A+     HHNATT+ TFPAN P F          
Sbjct: 106 KNHWNTKLKKKFNSVSETPNPTVAAAAAAAADGHHNATTDITFPANTPLFP--------- 165

Query: 203 YNTNFMFSCPFDFKNSLNFDPQDQFPVLNPNELSTSSSTSISAVEQNHLPFSGNGGGSDD 262
            N N +FS P      LNFDPQ +FP ++               EQ  +PFSGNGGGSDD
Sbjct: 166 -NANILFSTP------LNFDPQ-EFPTMD----------RFPTTEQTQIPFSGNGGGSDD 224

Query: 263 GEILLSYGFYQYPYDEDVVEGL-DVS 283
           GEILLSYGFYQYPY++ + EGL DVS
Sbjct: 226 GEILLSYGFYQYPYEDHLAEGLFDVS 224

[Close]

BLAST of Lcy03g011990 vs. ExPASy TrEMBL
Match: A0A0A0LZB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G575180 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 3.5e-54
Identity = 131/223 (58.74%), Postives = 149/223 (66.82%), Query Frame = 0


Query: 83  GLNRCGKSCRLRWLNYLRPDIKHGGFTPEEDNVIFTLYSTIGSRWAVIASQLPGRTDNDV 142
           GLNRCGKSCRLRWLNYLRPDIKHGGFT EEDNVI +LYSTIGSRWAVIASQLPGRTDNDV
Sbjct: 46  GLNRCGKSCRLRWLNYLRPDIKHGGFTQEEDNVICSLYSTIGSRWAVIASQLPGRTDNDV 105

Query: 143 KNHWNTKLKKKFN-SFSGPPNPTITATASHHNATTNATFPANPPPFSATA-----RLEEE 202
           KNHWNTKLKKKFN SFS PPNP +  T              +PP +SAT+     +L ++
Sbjct: 106 KNHWNTKLKKKFNSSFSKPPNPIVVVT--------------DPPRYSATSTANSLKLHDD 165

Query: 203 H---YNTNF-MFSCPFDFKNSLNFDPQDQFPVLNPN------ELSTSSSTSISAVEQNHL 262
           H    NTNF MFS         +  P DQ P+LN N      ELSTSSS+    +EQNHL
Sbjct: 166 HEHNINTNFNMFS---------SHPPFDQIPMLNNNNNPIIPELSTSSSSISLPIEQNHL 225

Query: 263 PFSGNGGGSDDGEILLSY--GFY----QYPYDEDVVEGLDVSN 284
            FSG     +  +IL SY  G Y    QYPY++DV++G DVSN
Sbjct: 226 EFSG-PSSDEAADILQSYFHGVYENNNQYPYEDDVMDGFDVSN 244

[Close]

BLAST of Lcy03g011990 vs. ExPASy TrEMBL
Match: A0A1S3BPH8 (transcription factor RAX2-like OS=Cucumis melo OX=3656 GN=LOC103492286 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 8.1e-51
Identity = 124/216 (57.41%), Postives = 142/216 (65.74%), Query Frame = 0


Query: 83  GLNRCGKSCRLRWLNYLRPDIKHGGFTPEEDNVIFTLYSTIGSRWAVIASQLPGRTDNDV 142
           GLNRCGKSCRLRWLNYLRPDIKHGGFT EEDNVI +LYSTIGSRWA+IASQLPGRTDNDV
Sbjct: 46  GLNRCGKSCRLRWLNYLRPDIKHGGFTQEEDNVICSLYSTIGSRWAIIASQLPGRTDNDV 105

Query: 143 KNHWNTKLKKKF-NSFSGPPNPTITATASHHNATTNATFPANPPPFSATARLEEEHYNTN 202
           KNHWNTKLKKKF NS S PPN T+  T     ++T A                E + NTN
Sbjct: 106 KNHWNTKLKKKFNNSLSEPPNSTMIVTDPSRYSSTTAN------SLKVLHNDHEHNINTN 165

Query: 203 F-MFSCPFDFKNSLNFDPQDQFPVLNPN------ELSTSSST-SISAVEQNHLPFSGNGG 262
           + MFS    F         DQ P+LN N      ELSTSSS+ S+  +EQNHL    +G 
Sbjct: 166 YNMFSSHPRF---------DQIPMLNNNNNPIIPELSTSSSSISLPNIEQNHLE-EFSGP 225

Query: 263 GSDDGEILLS------YGFYQYPYDEDVVEGLDVSN 284
           GSD+ EI+L       Y + QYPY++DV+EG  VSN
Sbjct: 226 GSDEAEIILQSYFHGVYDYNQYPYEDDVMEGFGVSN 245

[Close]

BLAST of Lcy03g011990 vs. NCBI nr
Match: XP_023530624.1 (transcription factor MYB36-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.5 bits (680), Expect = 2.6e-67
Identity = 145/203 (71.43%), Postives = 158/203 (77.83%), Query Frame = 0


Query: 83  GLNRCGKSCRLRWLNYLRPDIKHGGFTPEEDNVIFTLYSTIGSRWAVIASQLPGRTDNDV 142
           GLNRCGKSCRLRWLNYLRPDIKHGGFT EEDN+I TLYST+GSRWAVIASQLPGRTDNDV
Sbjct: 94  GLNRCGKSCRLRWLNYLRPDIKHGGFTLEEDNLICTLYSTLGSRWAVIASQLPGRTDNDV 153

Query: 143 KNHWNTKLKKKFNSFSGPPNPTITATASHHNATTNATFPANPPPFSATA---RLEEEHYN 202
           KNHWNTKLKKKFNSFS  P PTI A A+  NA TN  FPAN PP+SA A   RL+E+  +
Sbjct: 154 KNHWNTKLKKKFNSFSERPTPTI-AAATQQNAITNMAFPANAPPYSAAADWLRLDEQ-MD 213

Query: 203 TNFMFS-CPFDFKNSLNFDPQDQFPVL-NPNELSTSSSTSISAVEQNHLPFSGNGGGSDD 262
            N MF+   FDFK+    DP+DQFP+L NP ELSTSSS S   +EQN LPF GN      
Sbjct: 214 GNLMFADTNFDFKH----DPEDQFPMLWNPQELSTSSSNSSLPIEQNQLPFGGNA----- 273

Query: 263 GEILLSYGFYQYPYDEDVVEGLD 281
           GE LLSYGFYQYPY  DV+EGLD
Sbjct: 274 GEALLSYGFYQYPYG-DVMEGLD 284

[Close]

BLAST of Lcy03g011990 vs. NCBI nr
Match: XP_022933833.1 (transcription factor MYB36-like [Cucurbita moschata])

HSP 1 Score: 266.2 bits (679), Expect = 3.3e-67
Identity = 145/203 (71.43%), Postives = 158/203 (77.83%), Query Frame = 0


Query: 83  GLNRCGKSCRLRWLNYLRPDIKHGGFTPEEDNVIFTLYSTIGSRWAVIASQLPGRTDNDV 142
           GLNRCGKSCRLRWLNYLRPDIKHGGFT EEDN+I TLYST+GSRWAVIASQLPGRTDNDV
Sbjct: 46  GLNRCGKSCRLRWLNYLRPDIKHGGFTLEEDNLICTLYSTLGSRWAVIASQLPGRTDNDV 105

Query: 143 KNHWNTKLKKKFNSFSGPPNPTITATASHHNATTNATFPANPPPFSATA---RLEEEHYN 202
           KNHWNTKLKKKFNSFS  P PTI A A+  NA TN  FPAN PP+SA A   RL+E+  +
Sbjct: 106 KNHWNTKLKKKFNSFSERPAPTI-AAATQQNAITNMAFPANAPPYSAAADWIRLDEQ-MD 165

Query: 203 TNFMFS-CPFDFKNSLNFDPQDQFPVL-NPNELSTSSSTSISAVEQNHLPFSGNGGGSDD 262
            N MF+   FDFK+    DP+DQFP+L NP ELSTSSS S   +EQN LPF GN      
Sbjct: 166 GNLMFADANFDFKH----DPEDQFPMLWNPQELSTSSSNSSLPIEQNQLPFGGNA----- 225

Query: 263 GEILLSYGFYQYPYDEDVVEGLD 281
           GE LLSYGFYQYPY  DV+EGLD
Sbjct: 226 GEALLSYGFYQYPYG-DVMEGLD 236

[Close]

BLAST of Lcy03g011990 vs. NCBI nr
Match: KAG6588016.1 (Transcription factor RAX3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 263.1 bits (671), Expect = 2.8e-66
Identity = 143/203 (70.44%), Postives = 158/203 (77.83%), Query Frame = 0


Query: 83  GLNRCGKSCRLRWLNYLRPDIKHGGFTPEEDNVIFTLYSTIGSRWAVIASQLPGRTDNDV 142
           GLNRCGKSCRLRWLNYLRPDIKHGGFT EEDN+I TLYST+GSRWAVIASQLPGRTDNDV
Sbjct: 46  GLNRCGKSCRLRWLNYLRPDIKHGGFTLEEDNLICTLYSTLGSRWAVIASQLPGRTDNDV 105

Query: 143 KNHWNTKLKKKFNSFSGPPNPTITATASHHNATTNATFPANPPPFSATA---RLEEEHYN 202
           KNHWNTKLKKKFNSFS  P PT+ A A+  NA TN  FPAN PP+SA A   RL+E+  +
Sbjct: 106 KNHWNTKLKKKFNSFSERPAPTM-AAATQQNAITNMAFPANAPPYSAAADWIRLDEQ-MD 165

Query: 203 TNFMFS-CPFDFKNSLNFDPQDQFPVL-NPNELSTSSSTSISAVEQNHLPFSGNGGGSDD 262
            N MF+   FDFK+    DP+DQFP+L NP ELSTSSS S   +EQN LPF GN      
Sbjct: 166 GNLMFADANFDFKH----DPEDQFPMLWNPQELSTSSSNSSLPIEQNQLPFGGNA----- 225

Query: 263 GEILLSYGFYQYPYDEDVVEGLD 281
           GE LLSYGFYQYPY  DV+EGL+
Sbjct: 226 GEALLSYGFYQYPYG-DVMEGLN 236

[Close]

BLAST of Lcy03g011990 vs. NCBI nr
Match: XP_023005467.1 (transcription factor RAX3-like [Cucurbita maxima])

HSP 1 Score: 260.4 bits (664), Expect = 1.8e-65
Identity = 142/203 (69.95%), Postives = 156/203 (76.85%), Query Frame = 0


Query: 83  GLNRCGKSCRLRWLNYLRPDIKHGGFTPEEDNVIFTLYSTIGSRWAVIASQLPGRTDNDV 142
           GLNRCGKSCRLRWLNYLRPDIKHGGFT EEDN+I TLYST+GSRWAVIASQLPGRTDNDV
Sbjct: 46  GLNRCGKSCRLRWLNYLRPDIKHGGFTLEEDNLICTLYSTLGSRWAVIASQLPGRTDNDV 105

Query: 143 KNHWNTKLKKKFNSFSGPPNPTITATASHHNATTNATFPANPPPFSATA---RLEEEHYN 202
           KNHWNTKLKKKFNSFS    PTI A  +  NA TN  FPAN PP+SA A   R +E+  +
Sbjct: 106 KNHWNTKLKKKFNSFSERSAPTI-AAVTQQNAITNMAFPANAPPYSAAADWLRFDEQ-MD 165

Query: 203 TNFMFS-CPFDFKNSLNFDPQDQFPVL-NPNELSTSSSTSISAVEQNHLPFSGNGGGSDD 262
            N MF+   FDFK+    DP+DQFP+L NP ELSTSSS S   VEQN +PF GN     D
Sbjct: 166 GNLMFADANFDFKH----DPEDQFPMLWNPQELSTSSSNSSLPVEQNQVPFGGN-----D 225

Query: 263 GEILLSYGFYQYPYDEDVVEGLD 281
           GE +LSYGFYQYPY  DV+EGLD
Sbjct: 226 GETVLSYGFYQYPYG-DVMEGLD 236

[Close]

BLAST of Lcy03g011990 vs. NCBI nr
Match: XP_022145017.1 (transcription factor RAX2-like [Momordica charantia])

HSP 1 Score: 256.1 bits (653), Expect = 3.5e-64
Identity = 135/206 (65.53%), Postives = 148/206 (71.84%), Query Frame = 0


Query: 83  GLNRCGKSCRLRWLNYLRPDIKHGGFTPEEDNVIFTLYSTIGSRWAVIASQLPGRTDNDV 142
           GLNRCGKSCRLRWLNYLRPDIKHG FT EED+VI TLYS+IGSRWAVIASQLPGRTDNDV
Sbjct: 46  GLNRCGKSCRLRWLNYLRPDIKHGSFTEEEDSVICTLYSSIGSRWAVIASQLPGRTDNDV 105

Query: 143 KNHWNTKLKKKFNSFSGPPNPTITATAS-----HHNATTNATFPANPPPFSATARLEEEH 202
           KNHWNTKLKKKFNS S  PNPT+ A A+     HHNATT+ TFPAN P F          
Sbjct: 106 KNHWNTKLKKKFNSVSETPNPTVAAAAAAAADGHHNATTDITFPANTPLFP--------- 165

Query: 203 YNTNFMFSCPFDFKNSLNFDPQDQFPVLNPNELSTSSSTSISAVEQNHLPFSGNGGGSDD 262
            N N +FS P      LNFDPQ +FP ++               EQ  +PFSGNGGGSDD
Sbjct: 166 -NANILFSTP------LNFDPQ-EFPTMD----------RFPTTEQTQIPFSGNGGGSDD 224

Query: 263 GEILLSYGFYQYPYDEDVVEGL-DVS 283
           GEILLSYGFYQYPY++ + EGL DVS
Sbjct: 226 GEILLSYGFYQYPYEDHLAEGLFDVS 224

[Close]

BLAST of Lcy03g011990 vs. TAIR 10
Match: AT4G37780.1 (myb domain protein 87 )

HSP 1 Score: 137.1 bits (344), Expect = 2.2e-32
Identity = 58/78 (74.36%), Postives = 69/78 (88.46%), Query Frame = 0


Query: 82  LGLNRCGKSCRLRWLNYLRPDIKHGGFTPEEDNVIFTLYSTIGSRWAVIASQLPGRTDND 141
           +G+ RCGKSCRLRWLNYLRP++KHGGFT EED +I +LY TIGSRW++IASQLPGRTDND
Sbjct: 45  IGIKRCGKSCRLRWLNYLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDND 104

Query: 142 VKNHWNTKLKKKFNSFSG 160
           +KN+WNT+LKKK  S  G
Sbjct: 105 IKNYWNTRLKKKLLSKQG 122

[Close]

BLAST of Lcy03g011990 vs. TAIR 10
Match: AT5G65790.1 (myb domain protein 68 )

HSP 1 Score: 137.1 bits (344), Expect = 2.2e-32
Identity = 57/72 (79.17%), Postives = 67/72 (93.06%), Query Frame = 0


Query: 82  LGLNRCGKSCRLRWLNYLRPDIKHGGFTPEEDNVIFTLYSTIGSRWAVIASQLPGRTDND 141
           +GL RCGKSCRLRWLNYLRP+IKHGGF+ EEDN+I  LY TIGSRW++IA+QLPGRTDND
Sbjct: 45  IGLRRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICNLYVTIGSRWSIIAAQLPGRTDND 104

Query: 142 VKNHWNTKLKKK 154
           +KN+WNT+LKKK
Sbjct: 105 IKNYWNTRLKKK 116

[Close]

BLAST of Lcy03g011990 vs. TAIR 10
Match: AT3G49690.1 (myb domain protein 84 )

HSP 1 Score: 136.0 bits (341), Expect = 4.9e-32
Identity = 56/72 (77.78%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 82  LGLNRCGKSCRLRWLNYLRPDIKHGGFTPEEDNVIFTLYSTIGSRWAVIASQLPGRTDND 141
           +GL RCGKSCRLRWLNYLRP+IKHGGF+ EE+N+I +LY TIGSRW++IA+QLPGRTDND
Sbjct: 45  IGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDND 104

Query: 142 VKNHWNTKLKKK 154
           +KN+WNT+LKKK
Sbjct: 105 IKNYWNTRLKKK 116

[Close]

BLAST of Lcy03g011990 vs. TAIR 10
Match: AT2G36890.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 135.6 bits (340), Expect = 6.4e-32
Identity = 62/112 (55.36%), Postives = 81/112 (72.32%), Query Frame = 0


Query: 83  GLNRCGKSCRLRWLNYLRPDIKHGGFTPEEDNVIFTLYSTIGSRWAVIASQLPGRTDNDV 142
           GL RCGKSCRLRWLNYLRP+I+HG FT EEDN+I++L+++IGSRW+VIA+ L GRTDND+
Sbjct: 46  GLRRCGKSCRLRWLNYLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDI 105

Query: 143 KNHWNTKLKKKFNSFSGPP----------NPTITATASHHNATTNATFPANP 185
           KN+WNTKLKKK  +   PP          + + + ++S H    N+  P NP
Sbjct: 106 KNYWNTKLKKKLIATMAPPPHHHLAIATSSSSASPSSSSHYNMINSLLPYNP 157

[Close]

BLAST of Lcy03g011990 vs. TAIR 10
Match: AT5G57620.1 (myb domain protein 36 )

HSP 1 Score: 135.6 bits (340), Expect = 6.4e-32
Identity = 64/110 (58.18%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 82  LGLNRCGKSCRLRWLNYLRPDIKHGGFTPEEDNVIFTLYSTIGSRWAVIASQLPGRTDND 141
           +GL RCGKSCRLRWLNYLRP+IKHGGF+ EED +I +LY +IGSRW++IA+QLPGRTDND
Sbjct: 45  IGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDND 104

Query: 142 VKNHWNTKLKKKFNSFSGPPNPTITATASHHNATTNATFPANPPPFSATA 192
           +KN+WNTKLKKK        N   + T S  N  +N     +P   S +A
Sbjct: 105 IKNYWNTKLKKKLLGRQKQMNRQDSITDSTENNLSNNNNNKSPQNLSNSA 154

The following BLAST results are available for this feature:

BLAST of Lcy03g011990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JSU0	3.1e-31	74.36	Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1	[more]
Q9M2Y9	6.9e-31	77.78	Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1	[more]
Q9FKL2	8.9e-31	58.18	Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1	[more]
Q9SJL7	8.9e-31	55.36	Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1	[more]
Q9FG68	1.7e-29	56.86	Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1	[more]

BLAST of Lcy03g011990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5Y4	1.6e-67	71.43	transcription factor MYB36-like OS=Cucurbita moschata OX=3662 GN=LOC111441129 PE...	[more]
A0A6J1KT76	8.9e-66	69.95	transcription factor RAX3-like OS=Cucurbita maxima OX=3661 GN=LOC111498442 PE=4 ...	[more]
A0A6J1CVC2	1.7e-64	65.53	transcription factor RAX2-like OS=Momordica charantia OX=3673 GN=LOC111014545 PE...	[more]
A0A0A0LZB2	3.5e-54	58.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G575180 PE=4 SV=1	[more]
A0A1S3BPH8	8.1e-51	57.41	transcription factor RAX2-like OS=Cucumis melo OX=3656 GN=LOC103492286 PE=4 SV=1	[more]

BLAST of Lcy03g011990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023530624.1	2.6e-67	71.43	transcription factor MYB36-like [Cucurbita pepo subsp. pepo]	[more]
XP_022933833.1	3.3e-67	71.43	transcription factor MYB36-like [Cucurbita moschata]	[more]
KAG6588016.1	2.8e-66	70.44	Transcription factor RAX3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023005467.1	1.8e-65	69.95	transcription factor RAX3-like [Cucurbita maxima]	[more]
XP_022145017.1	3.5e-64	65.53	transcription factor RAX2-like [Momordica charantia]	[more]

BLAST of Lcy03g011990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37780.1	2.2e-32	74.36	myb domain protein 87	[more]
AT5G65790.1	2.2e-32	79.17	myb domain protein 68	[more]
AT3G49690.1	4.9e-32	77.78	myb domain protein 84	[more]
AT2G36890.1	6.4e-32	55.36	Duplicated homeodomain-like superfamily protein	[more]
AT5G57620.1	6.4e-32	58.18	myb domain protein 36	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 104..152 e-value: 3.0E-12 score: 56.7 coord: 51..101 e-value: 80.0 score: 0.5
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 100..150 score: 9.813886
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 108..150 e-value: 1.3929E-9 score: 50.6518
None	No IPR available	GENE3D	1.10.10.60		coord: 10..104 e-value: 3.9E-7 score: 31.9
None	No IPR available	GENE3D	1.10.10.60		coord: 107..178 e-value: 1.1E-19 score: 72.2
None	No IPR available	PANTHER	PTHR48000:SF36	OS09G0431300 PROTEIN	coord: 82..200
None	No IPR available	PANTHER	PTHR48000	OS09G0431300 PROTEIN	coord: 82..200
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 106..148 e-value: 6.9E-11 score: 42.2
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 100..154 score: 20.265875
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 85..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g011990.1	Lcy03g011990.1	mRNA