Homology
BLAST of Lcy03g010710 vs. ExPASy Swiss-Prot
Match:
Q9FMA1 (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)
HSP 1 Score: 529.6 bits (1363), Expect = 4.0e-149
Identity = 271/509 (53.24%), Postives = 371/509 (72.89%), Query Frame = 0
Query: 27 TSLLSSCRDPRHIYQIHGFMLHRALDQDNLLLSRFIDACSSLGLSLYAFSVFSNKTHHDL 86
TSL + + + Q H +M+ L++DNL +++FI+ACS+ G YA+SVF+++ +
Sbjct: 19 TSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNT 78
Query: 87 RLYNTAIKALSQTSSPVS---AISLYAKIRIEGLRPDSYSIPFVLKAVVQLSAVQVGRQI 146
L+NT I+ALS P + AI++Y K+ +PD+++ PFVLK V++S V GRQI
Sbjct: 79 YLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQI 138
Query: 147 HTQTVSSALDKDVNVVTSLIQMYSSCGCVSDARKLFDFVSFRDVALWNAMVAGYVKVAEL 206
H Q V D V+VVT LIQMY SCG + DARK+FD + +DV +WNA++AGY KV E+
Sbjct: 139 HGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEM 198
Query: 207 NSARKVFDEMP--QRNVISWTALIAGYAQTNRPDEAIALFRKMQLEKVEPDEIAMLAVLS 266
+ AR + + MP RN +SWT +I+GYA++ R EAI +F++M +E VEPDE+ +LAVLS
Sbjct: 199 DEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLS 258
Query: 267 ACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKHKSVIT 326
ACADLG+LELGE I +Y++ G+ R V L NA+IDMYAKSGNI +AL+VFE + ++V+T
Sbjct: 259 ACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVT 318
Query: 327 WSTMIAALALHGLGGEAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFDRMQ 386
W+T+IA LA HG G EA+ MF RM KA VRPN+VTFIAILSACSHVG VD+G+ F+ M+
Sbjct: 319 WTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMR 378
Query: 387 SMYKTEPKIEHYGCMIDLLARAGYLQEAQKLLQDMPFEANAAIWGSLLAASHIHRDAELA 446
S Y P IEHYGCMIDLL RAG L+EA ++++ MPF+ANAAIWGSLLAAS++H D EL
Sbjct: 379 SKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELG 438
Query: 447 EQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNR 506
E+AL L KLEP NSGNY LL+N Y+ LGRW+ES M+R +M+ GVKK G S IE+ NR
Sbjct: 439 ERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENR 498
Query: 507 VYEFLAGDKSDSQLHGIYHVLCKIIVQLK 531
VY+F++GD + Q+ I+ +L ++ +Q++
Sbjct: 499 VYKFISGDLTHPQVERIHEILQEMDLQIQ 527
BLAST of Lcy03g010710 vs. ExPASy Swiss-Prot
Match:
Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)
HSP 1 Score: 393.3 bits (1009), Expect = 4.5e-108
Identity = 195/487 (40.04%), Postives = 306/487 (62.83%), Query Frame = 0
Query: 26 FTSLLSSCRDPRHIYQIHGFMLHRALDQDNLLLSRFIDACSSLGLSLYAFSVFSNKTHHD 85
F L + +I+ ++ L Q + ++++ +D C + YA +F+ ++ +
Sbjct: 13 FIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPN 72
Query: 86 LRLYNTAIKALSQTSSPVSAISLYAKIRIEGLR-PDSYSIPFVLKAVVQLSAVQVGRQIH 145
+ LYN+ I+A + S I +Y ++ + PD ++ PF+ K+ L + +G+Q+H
Sbjct: 73 VFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVH 132
Query: 146 TQTVSSALDKDVNVVTSLIQMYSSCGCVSDARKLFDFVSFRDVALWNAMVAGYVKVAELN 205
V +LI MY + DA K+FD + RDV WN++++GY ++ ++
Sbjct: 133 GHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMK 192
Query: 206 SARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIALFRKMQLEKVEPDEIAMLAVLSACA 265
A+ +F M + ++SWTA+I+GY EA+ FR+MQL +EPDEI++++VL +CA
Sbjct: 193 KAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCA 252
Query: 266 DLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKHKSVITWST 325
LG+LELG+WIH Y E+ G + + NALI+MY+K G I +A+++F M+ K VI+WST
Sbjct: 253 QLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWST 312
Query: 326 MIAALALHGLGGEAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFDRMQSMY 385
MI+ A HG AI+ F M++A+V+PN +TF+ +LSACSHVGM G YFD M+ Y
Sbjct: 313 MISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDY 372
Query: 386 KTEPKIEHYGCMIDLLARAGYLQEAQKLLQDMPFEANAAIWGSLLAASHIHRDAELAEQA 445
+ EPKIEHYGC+ID+LARAG L+ A ++ + MP + ++ IWGSLL++ + ++A A
Sbjct: 373 QIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVA 432
Query: 446 LRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYE 505
+ HL +LEPE+ GNY LL+N YA LG+W + +RK++RN +KK PGGS IE+NN V E
Sbjct: 433 MDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQE 492
Query: 506 FLAGDKS 512
F++GD S
Sbjct: 493 FVSGDNS 499
BLAST of Lcy03g010710 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 384.8 bits (987), Expect = 1.6e-105
Identity = 186/493 (37.73%), Postives = 303/493 (61.46%), Query Frame = 0
Query: 42 IHGFMLHRALDQDNLLLSRFIDACSSLGLSLYAFSVFSNKTHHDLRLYNTAIKALSQTSS 101
+HG + A+ D + + I S G A VF+ D+ +N+ I Q S
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 102 PVSAISLYAKIRIEGLRPDSYSIPFVLKAVVQLSAVQVGRQIHTQTVSSALDKDVNVVTS 161
P A+ L+ K+ E ++ ++ VL A ++ ++ GRQ+ + + ++ ++ + +
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 162 LIQMYSSCGCVSDARKLFDFVSFRDVALWNAMVAGYVKVAELNSARKVFDEMPQRNVISW 221
++ MY+ CG + DA++LFD + +D W M+ GY + +AR+V + MPQ+++++W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 222 TALIAGYAQTNRPDEAIALFRKMQLEK-VEPDEIAMLAVLSACADLGALELGEWIHNYIE 281
ALI+ Y Q +P+EA+ +F ++QL+K ++ ++I +++ LSACA +GALELG WIH+YI+
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 282 KHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKHKSVITWSTMIAALALHGLGGEAID 341
KHG+ + +ALI MY+K G++ ++ EVF +++ + V WS MI LA+HG G EA+D
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452
Query: 342 MFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFDRMQSMYKTEPKIEHYGCMIDLL 401
MF +M++A V+PN VTF + ACSH G+VD F +M+S Y P+ +HY C++D+L
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512
Query: 402 ARAGYLQEAQKLLQDMPFEANAAIWGSLLAASHIHRDAELAEQALRHLAKLEPENSGNYT 461
R+GYL++A K ++ MP + ++WG+LL A IH + LAE A L +LEP N G +
Sbjct: 513 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHV 572
Query: 462 LLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGIYH 521
LLSN YA LG+W +RK MR G+KK PG S IEI+ ++EFL+GD + +Y
Sbjct: 573 LLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYG 632
Query: 522 VLCKIIVQLKMAG 534
L +++ +LK G
Sbjct: 633 KLHEVMEKLKSNG 645
BLAST of Lcy03g010710 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 384.0 bits (985), Expect = 2.7e-105
Identity = 225/630 (35.71%), Postives = 324/630 (51.43%), Query Frame = 0
Query: 28 SLLSSCRDPRHIYQIHGFMLHRALDQDNLLLSRFIDAC----SSLGLSLYAFSVFSNKTH 87
SLL +C+ + + IH M+ L N LS+ I+ C GL YA SVF
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLP-YAISVFKTIQE 97
Query: 88 HDLRLYNTAIKALSQTSSPVSAISLYAKIRIEGLRPDSYSIPFVLKAVVQLSAVQVGRQI 147
+L ++NT + + +S PVSA+ LY + GL P+SY+ PFVLK+ + A + G+QI
Sbjct: 98 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 157
Query: 148 HTQTVSSALDKDVNVVTSLIQMYSSCGCVSDARKLFDFVSFRDVALWNAMVAGYVKVAEL 207
H + D D+ V TSLI MY G + DA K+FD RDV + A++ GY +
Sbjct: 158 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 217
Query: 208 NSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIALFRKMQLEKVEPDE---------- 267
+A+K+FDE+P ++V+SW A+I+GYA+T EA+ LF+ M V PDE
Sbjct: 218 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 277
Query: 268 ------------------------------------------------------------ 327
Sbjct: 278 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 337
Query: 328 -------------------------------IAMLAVLSACADLGALELGEWIHNYIEKH 387
+ ML++L ACA LGA+++G WIH YI+K
Sbjct: 338 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 397
Query: 388 --GLCRIVPLYNALIDMYAKSGNIRRALEVFENMKHKSVITWSTMIAALALHGLGGEAID 447
G+ L +LIDMYAK G+I A +VF ++ HKS+ +W+ MI A+HG + D
Sbjct: 398 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFD 457
Query: 448 MFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFDRMQSMYKTEPKIEHYGCMIDLL 507
+F RM K ++P+++TF+ +LSACSH GM+D+GR+ F M YK PK+EHYGCMIDLL
Sbjct: 458 LFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLL 517
Query: 508 ARAGYLQEAQKLLQDMPFEANAAIWGSLLAASHIHRDAELAEQALRHLAKLEPENSGNYT 541
+G +EA++++ M E + IW SLL A +H + EL E +L K+EPEN G+Y
Sbjct: 518 GHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYV 577
BLAST of Lcy03g010710 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 378.3 bits (970), Expect = 1.5e-103
Identity = 197/494 (39.88%), Postives = 288/494 (58.30%), Query Frame = 0
Query: 28 SLLSSCRDPRHIYQIHGFMLHRALDQDNLLLSRFIDAC---SSLGLSLYAFSVFSNKTHH 87
S L C + QIH ML L QD+ +++F+ C +S YA VF
Sbjct: 19 SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 78
Query: 88 DLRLYNTAIKALSQTSSPVSAISLYAKIRIEGLRPDSYSIPFVLKAVVQLSAVQVGRQIH 147
D L+N I+ S + P ++ LY ++ ++Y+ P +LKA LSA + QIH
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 148 TQTVSSALDKDVNVVTSLIQMYSSCGCVSDARKLFDFVSFRDVALWNAMVAGYVKVAELN 207
Q + DV V SLI Y+ G A LFD + D WN+++ GYVK +++
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198
Query: 208 SARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIALFRKMQLEKVEPDEIAMLAVLSACA 267
A +F +M ++N ISWT +I+GY Q + EA+ LF +MQ VEPD +++ LSACA
Sbjct: 199 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 258
Query: 268 DLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKHKSVITWST 327
LGALE G+WIH+Y+ K + L LIDMYAK G + ALEVF+N+K KSV W+
Sbjct: 259 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318
Query: 328 MIAALALHGLGGEAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFDRMQSMY 387
+I+ A HG G EAI F+ M+K ++PN +TF A+L+ACS+ G+V+ G+ F M+ Y
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 378
Query: 388 KTEPKIEHYGCMIDLLARAGYLQEAQKLLQDMPFEANAAIWGSLLAASHIHRDAELAEQA 447
+P IEHYGC++DLL RAG L EA++ +Q+MP + NA IWG+LL A IH++ EL E+
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438
Query: 448 LRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYE 507
L ++P + G Y +N +A +W+++ R++M+ GV K PG S I + +E
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 498
Query: 508 FLAGDKSDSQLHGI 519
FLAGD+S ++ I
Sbjct: 499 FLAGDRSHPEIEKI 512
BLAST of Lcy03g010710 vs. ExPASy TrEMBL
Match:
A0A6J1JID8 (pentatricopeptide repeat-containing protein At5g56310 OS=Cucurbita maxima OX=3661 GN=LOC111484870 PE=4 SV=1)
HSP 1 Score: 977.6 bits (2526), Expect = 2.1e-281
Identity = 491/539 (91.09%), Postives = 513/539 (95.18%), Query Frame = 0
Query: 1 MRWSLS-LCKSSSSFIKPAIFTTPLAFTSLLSSCRDPRHIYQIHGFMLHRALDQDNLLLS 60
MRWSLS LCKSSSSF++ IFT P A TSLLS+CRD RHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1 MRWSLSRLCKSSSSFVESTIFTAPFALTSLLSNCRDSRHIYQIHGFMLHRALDQDNLLLS 60
Query: 61 RFIDACSSLGLSLYAFSVFSNKTHHDLRLYNTAIKALSQTSSPVSAISLYAKIRIEGLRP 120
RFIDACSSLGL LYAFSVFSNKTH DLRLYNTA+KALSQTSSP++AISLY++I IEGLRP
Sbjct: 61 RFIDACSSLGLYLYAFSVFSNKTHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
Query: 121 DSYSIPFVLKAVVQLSAVQVGRQIHTQTVSSALDKDVNVVTSLIQMYSSCGCVSDARKLF 180
DSY+IPFVLKAVVQLS V+VGRQIHTQTVSS LD DVNVVTSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYTIPFVLKAVVQLSVVEVGRQIHTQTVSSGLDTDVNVVTSLIQMYSSCGCVSDARKLF 180
Query: 181 DFVSFRDVALWNAMVAGYVKVAELNSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIA 240
D V ++DVALWNAMVAGYVKVAELNSARKVFD+MPQRNVISWTALIAGYAQTNRPD AI
Sbjct: 181 DLVDYKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 301 KSGNIRRALEVFENMKHKSVITWSTMIAALALHGLGGEAIDMFLRMEKARVRPNEVTFIA 360
KSGNI RALEVFENMKHKSVITWSTMIAA+ALHGLGG+AIDMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
Query: 361 ILSACSHVGMVDVGRYYFDRMQSMYKTEPKIEHYGCMIDLLARAGYLQEAQKLLQDMPFE 420
ILSACSHVGMVDVGRYYF+RMQS+YK +P+IEHYGCMIDLLARAGYLQEAQKL QDMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPFE 420
Query: 421 ANAAIWGSLLAASHIHRDAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAAS+ HRDA+LAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGIYHVLCKIIVQLKMAGSLQEE 539
KVMRNAGVKKAPGGSFIEINNRVYEFLAGD+SDSQLHGIY VLC IIVQLKMAGS EE
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEE 539
BLAST of Lcy03g010710 vs. ExPASy TrEMBL
Match:
A0A6J1H9N0 (pentatricopeptide repeat-containing protein At5g56310 OS=Cucurbita moschata OX=3662 GN=LOC111461370 PE=4 SV=1)
HSP 1 Score: 962.6 bits (2487), Expect = 6.9e-277
Identity = 484/540 (89.63%), Postives = 509/540 (94.26%), Query Frame = 0
Query: 1 MRWSL-SLCKSSSSFIKPAIFTTPLAFTSLLSSCRDPRHIYQIHGFMLHRALDQDNLLLS 60
MRWSL LCKSSSSF++ P A TSLLS+CRDPRHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1 MRWSLFRLCKSSSSFVES---FAPSAITSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
Query: 61 RFIDACSSLGLSLYAFSVFSNKTHHDLRLYNTAIKALSQTSSPVSAISLYAKIRIEGLRP 120
RFIDACSSLGL LYA SVFSNK H DLRLYNTA+KALSQTSSP++AISLY++I IEGLRP
Sbjct: 61 RFIDACSSLGLYLYALSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
Query: 121 DSYSIPFVLKAVVQLSAVQVGRQIHTQTVSSALDKDVNVVTSLIQMYSSCGCVSDARKLF 180
DSY+IPFVLKA+VQLSAV+VGRQIHTQTVSS LD DVNVVTSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYTIPFVLKAIVQLSAVEVGRQIHTQTVSSGLDTDVNVVTSLIQMYSSCGCVSDARKLF 180
Query: 181 DFVSFRDVALWNAMVAGYVKVAELNSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIA 240
D V F+DVALWNAMVAGYVKVAELNSARKVFD+MPQRNVISWTALIAGYAQTNRPD AI
Sbjct: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 301 KSGNIRRALEVFENMKHKSVITWSTMIAALALHGLGGEAIDMFLRMEKARVRPNEVTFIA 360
KSGNI RALEVFENMKHK+VITWSTMIAA+ALHGLGG+A DMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKNVITWSTMIAAMALHGLGGQATDMFLRMEKARVRPNEVTFIA 360
Query: 361 ILSACSHVGMVDVGRYYFDRMQSMYKTEPKIEHYGCMIDLLARAGYLQEAQKLLQDMPFE 420
ILSACSHVGMVDVGRYYF+RMQS+YK +P+IEHYGCMIDLLARAGYLQEAQKL QDMP+E
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
Query: 421 ANAAIWGSLLAASHIHRDAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAAS+ HRDA+LAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGIYHVLCKIIVQLKMAGSLQEEW 540
KVMRNAGVKKAPGGSFIEINNRV+EFLAGD+SDSQLHGIY VLC IIVQLKMAGS EEW
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 537
BLAST of Lcy03g010710 vs. ExPASy TrEMBL
Match:
A0A6J1D0Q9 (pentatricopeptide repeat-containing protein At5g56310 OS=Momordica charantia OX=3673 GN=LOC111016516 PE=4 SV=1)
HSP 1 Score: 943.0 bits (2436), Expect = 5.6e-271
Identity = 472/540 (87.41%), Postives = 509/540 (94.26%), Query Frame = 0
Query: 1 MRWSLS-LCKSSSSFIKPAIFTTPLAFTSLLSSCRDPRHIYQIHGFMLHRALDQDNLLLS 60
MRWSLS LCKSS FI+ IFT P AF SLLSSC DPRH+ QIHGFM+ RALDQDNL+LS
Sbjct: 1 MRWSLSILCKSSPFFIQRTIFTAPHAFNSLLSSCCDPRHVPQIHGFMVPRALDQDNLILS 60
Query: 61 RFIDACSSLGLSLYAFSVFSNKTHHDLRLYNTAIKALSQTSSPVSAISLYAKIRIEGLRP 120
RFIDACSSL L YA+SVFS+KT+ DLRLYNT IKALSQTSSP+ AISL+++IR EGL+P
Sbjct: 61 RFIDACSSLRLYTYAYSVFSSKTNPDLRLYNTTIKALSQTSSPIHAISLFSRIRSEGLQP 120
Query: 121 DSYSIPFVLKAVVQLSAVQVGRQIHTQTVSSALDKDVNVVTSLIQMYSSCGCVSDARKLF 180
DSYSIPFVLKAVV++S +QVGRQIHTQTV SALD DVNVVTSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYSIPFVLKAVVKISTLQVGRQIHTQTVFSALDTDVNVVTSLIQMYSSCGCVSDARKLF 180
Query: 181 DFVSFRDVALWNAMVAGYVKVAELNSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIA 240
DFV +RDVALWN+MVAGYVKVA+LNSARK+FDEMPQRNVI+WTALIAGYAQ NRPDEAIA
Sbjct: 181 DFVPYRDVALWNSMVAGYVKVAKLNSARKLFDEMPQRNVITWTALIAGYAQNNRPDEAIA 240
Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
LFRKMQL++VEPDEIAMLAVLSACADLGALELGEWIHNYI KHGLCRIVPLYNALIDMY+
Sbjct: 241 LFRKMQLQEVEPDEIAMLAVLSACADLGALELGEWIHNYIVKHGLCRIVPLYNALIDMYS 300
Query: 301 KSGNIRRALEVFENMKHKSVITWSTMIAALALHGLGGEAIDMFLRMEKARVRPNEVTFIA 360
KSGNIRRALE+FENMK KSVITWSTMIAALALHG GGEAID+FLRMEKARVRPNE+TFIA
Sbjct: 301 KSGNIRRALEIFENMKQKSVITWSTMIAALALHGRGGEAIDIFLRMEKARVRPNEITFIA 360
Query: 361 ILSACSHVGMVDVGRYYFDRMQSMYKTEPKIEHYGCMIDLLARAGYLQEAQKLLQDMPFE 420
ILSACSHVGMVD+GRYYFDRMQS YK +P+IEHYGCMIDLLARAG+LQEAQK+L+DMPFE
Sbjct: 361 ILSACSHVGMVDMGRYYFDRMQSTYKIKPQIEHYGCMIDLLARAGHLQEAQKVLKDMPFE 420
Query: 421 ANAAIWGSLLAASHIHRDAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAAS+IHRDAELAEQALRHLA+LEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNIHRDAELAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGIYHVLCKIIVQLKMAGSLQEEW 540
KVMRNAGVKKAPGGSFIEINN+VYEFLAGDKSDSQLH I+HVLCK IVQLKMAG LQ+EW
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNKVYEFLAGDKSDSQLHEIFHVLCKTIVQLKMAGLLQDEW 540
BLAST of Lcy03g010710 vs. ExPASy TrEMBL
Match:
A0A0A0LX33 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G598880 PE=4 SV=1)
HSP 1 Score: 935.6 bits (2417), Expect = 9.0e-269
Identity = 473/540 (87.59%), Postives = 500/540 (92.59%), Query Frame = 0
Query: 1 MRWSLS-LCKSSSSFIKPAIFTTPLAFTSLLSSCRDPRHIYQIHGFMLHRALDQDNLLLS 60
M WS S L KSSSSF KPAIFT+ L FTSLLS+CR H+YQIHGFMLHRALDQDNL LS
Sbjct: 1 MCWSFSLLSKSSSSFFKPAIFTSSLQFTSLLSNCRHHLHLYQIHGFMLHRALDQDNLFLS 60
Query: 61 RFIDACSSLGLSLYAFSVFSNKTHHDLRLYNTAIKALSQTSSPVSAISLYAKIRIEGLRP 120
+FIDAC+SLGLS YAFS+FSNKTH DLRLYNTAIKALS+TSSP++AI LY +IRI+GLRP
Sbjct: 61 QFIDACTSLGLSSYAFSIFSNKTHPDLRLYNTAIKALSKTSSPINAIWLYTRIRIDGLRP 120
Query: 121 DSYSIPFVLKAVVQLSAVQVGRQIHTQTVSSALDKDVNVVTSLIQMYSSCGCVSDARKLF 180
DSYSIP VLKAVV+LSAV+VGRQIHTQTVSSALD DVNV TSLIQMYSSCG VSDARKLF
Sbjct: 121 DSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSALDMDVNVATSLIQMYSSCGFVSDARKLF 180
Query: 181 DFVSFRDVALWNAMVAGYVKVAELNSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIA 240
DFV F+DVALWNAMVAGYVKV EL SARKVF+EMPQRNVISWT LIAGYAQTNRP EAI
Sbjct: 181 DFVGFKDVALWNAMVAGYVKVGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240
Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
LFRKMQLE+VEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIV LYNALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDMYA 300
Query: 301 KSGNIRRALEVFENMKHKSVITWSTMIAALALHGLGGEAIDMFLRMEKARVRPNEVTFIA 360
KSGNIRRALEVFENMK KSVITWST+IAALALHGLGGEAIDMFLRMEKA+VRPNEVTF+A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVA 360
Query: 361 ILSACSHVGMVDVGRYYFDRMQSMYKTEPKIEHYGCMIDLLARAGYLQEAQKLLQDMPFE 420
ILSACSHVGMVDVGRYYFD+MQSMYK EPKIEHYGCMIDLLARAGYLQEAQKLL DMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 420
Query: 421 ANAAIWGSLLAASHIHRDAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANA IWGSLLAAS+ HRDAELA+ AL+HLAKLEP NSGNY LLSNTYAALG+WNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHRDAELAQLALKHLAKLEPGNSGNYVLLSNTYAALGKWNESGTVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGIYHVLCKIIVQLKMAGSLQEEW 540
K+MRNAGVKKAPGGS IEINN VYEFLAGD SDSQ+H IYHVLCKII+QLKMAGS QEEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNIVYEFLAGDMSDSQVHEIYHVLCKIILQLKMAGSYQEEW 540
BLAST of Lcy03g010710 vs. ExPASy TrEMBL
Match:
A0A5D3CFJ6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001140 PE=4 SV=1)
HSP 1 Score: 927.9 bits (2397), Expect = 1.9e-266
Identity = 464/540 (85.93%), Postives = 498/540 (92.22%), Query Frame = 0
Query: 1 MRWSLS-LCKSSSSFIKPAIFTTPLAFTSLLSSCRDPRHIYQIHGFMLHRALDQDNLLLS 60
M WS S L KSSSSF +P+IFT+PL FTSLLS+CR H+YQ+HGFMLHRALDQDNL LS
Sbjct: 1 MCWSFSLLSKSSSSFFRPSIFTSPLQFTSLLSNCRHHLHLYQVHGFMLHRALDQDNLFLS 60
Query: 61 RFIDACSSLGLSLYAFSVFSNKTHHDLRLYNTAIKALSQTSSPVSAISLYAKIRIEGLRP 120
+FIDAC+SLGLS YAFS+FSNK H DLRLYNTAIKALS+TSSP++AI LY +I+I+GLRP
Sbjct: 61 QFIDACTSLGLSSYAFSIFSNKAHPDLRLYNTAIKALSKTSSPINAIWLYTRIQIDGLRP 120
Query: 121 DSYSIPFVLKAVVQLSAVQVGRQIHTQTVSSALDKDVNVVTSLIQMYSSCGCVSDARKLF 180
DSYSIPFVLKAVV+LSAV+VGRQIH QTVSSALD DVNV TSLIQMYSSCG VSDARK F
Sbjct: 121 DSYSIPFVLKAVVKLSAVEVGRQIHAQTVSSALDMDVNVATSLIQMYSSCGFVSDARKQF 180
Query: 181 DFVSFRDVALWNAMVAGYVKVAELNSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIA 240
DFV F+DVALWNAMVAGYVK+ EL +ARKVF+EMPQRNVISWT LIAGYAQTNRP EAI
Sbjct: 181 DFVDFKDVALWNAMVAGYVKIGELKNARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240
Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
LFRKMQLE+VEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
Query: 301 KSGNIRRALEVFENMKHKSVITWSTMIAALALHGLGGEAIDMFLRMEKARVRPNEVTFIA 360
KSGNIRRALEVFENMK KSVITWST+IAALALHGLG EAIDMFLRMEK +VRPNEVTF A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGREAIDMFLRMEKEKVRPNEVTFTA 360
Query: 361 ILSACSHVGMVDVGRYYFDRMQSMYKTEPKIEHYGCMIDLLARAGYLQEAQKLLQDMPFE 420
ILSACSHVGMVDVGRYYFD+MQSMY+ EP+IEHYGCMIDLLARAGYLQEA KLL DMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYRIEPQIEHYGCMIDLLARAGYLQEAHKLLHDMPFE 420
Query: 421 ANAAIWGSLLAASHIHRDAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANA IWGSLLAAS+ H+DA LA+QAL+HLAKLEPENSGNY LLSNTYAALGRWNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHKDAGLAQQALKHLAKLEPENSGNYVLLSNTYAALGRWNESGTVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGIYHVLCKIIVQLKMAGSLQEEW 540
K+MRNAGVKKAPGGS IEINNRVYEFLAGDKSDS +H IYHVLCKII+QLKMAGS QEEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNRVYEFLAGDKSDSHVHEIYHVLCKIILQLKMAGSYQEEW 540
BLAST of Lcy03g010710 vs. NCBI nr
Match:
XP_022987264.1 (pentatricopeptide repeat-containing protein At5g56310 [Cucurbita maxima])
HSP 1 Score: 977.6 bits (2526), Expect = 4.3e-281
Identity = 491/539 (91.09%), Postives = 513/539 (95.18%), Query Frame = 0
Query: 1 MRWSLS-LCKSSSSFIKPAIFTTPLAFTSLLSSCRDPRHIYQIHGFMLHRALDQDNLLLS 60
MRWSLS LCKSSSSF++ IFT P A TSLLS+CRD RHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1 MRWSLSRLCKSSSSFVESTIFTAPFALTSLLSNCRDSRHIYQIHGFMLHRALDQDNLLLS 60
Query: 61 RFIDACSSLGLSLYAFSVFSNKTHHDLRLYNTAIKALSQTSSPVSAISLYAKIRIEGLRP 120
RFIDACSSLGL LYAFSVFSNKTH DLRLYNTA+KALSQTSSP++AISLY++I IEGLRP
Sbjct: 61 RFIDACSSLGLYLYAFSVFSNKTHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
Query: 121 DSYSIPFVLKAVVQLSAVQVGRQIHTQTVSSALDKDVNVVTSLIQMYSSCGCVSDARKLF 180
DSY+IPFVLKAVVQLS V+VGRQIHTQTVSS LD DVNVVTSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYTIPFVLKAVVQLSVVEVGRQIHTQTVSSGLDTDVNVVTSLIQMYSSCGCVSDARKLF 180
Query: 181 DFVSFRDVALWNAMVAGYVKVAELNSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIA 240
D V ++DVALWNAMVAGYVKVAELNSARKVFD+MPQRNVISWTALIAGYAQTNRPD AI
Sbjct: 181 DLVDYKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 301 KSGNIRRALEVFENMKHKSVITWSTMIAALALHGLGGEAIDMFLRMEKARVRPNEVTFIA 360
KSGNI RALEVFENMKHKSVITWSTMIAA+ALHGLGG+AIDMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
Query: 361 ILSACSHVGMVDVGRYYFDRMQSMYKTEPKIEHYGCMIDLLARAGYLQEAQKLLQDMPFE 420
ILSACSHVGMVDVGRYYF+RMQS+YK +P+IEHYGCMIDLLARAGYLQEAQKL QDMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPFE 420
Query: 421 ANAAIWGSLLAASHIHRDAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAAS+ HRDA+LAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGIYHVLCKIIVQLKMAGSLQEE 539
KVMRNAGVKKAPGGSFIEINNRVYEFLAGD+SDSQLHGIY VLC IIVQLKMAGS EE
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEE 539
BLAST of Lcy03g010710 vs. NCBI nr
Match:
XP_023515616.1 (pentatricopeptide repeat-containing protein At5g56310 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 975.7 bits (2521), Expect = 1.6e-280
Identity = 489/540 (90.56%), Postives = 513/540 (95.00%), Query Frame = 0
Query: 1 MRWSLS-LCKSSSSFIKPAIFTTPLAFTSLLSSCRDPRHIYQIHGFMLHRALDQDNLLLS 60
MRWSLS LCKSSSSF++ IFT P A TSLLS+CRD RHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1 MRWSLSRLCKSSSSFVESTIFTAPFALTSLLSNCRDSRHIYQIHGFMLHRALDQDNLLLS 60
Query: 61 RFIDACSSLGLSLYAFSVFSNKTHHDLRLYNTAIKALSQTSSPVSAISLYAKIRIEGLRP 120
RFIDACSSLGL LYAFSVFSNKTH DLRLYNTA+KALSQTSSP++AISLY++I IEGLRP
Sbjct: 61 RFIDACSSLGLYLYAFSVFSNKTHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
Query: 121 DSYSIPFVLKAVVQLSAVQVGRQIHTQTVSSALDKDVNVVTSLIQMYSSCGCVSDARKLF 180
DSY+IPFVLKAVVQLSAV+VGRQIHTQTVSS LD DVNV TSLIQMYS CGCVSDARKLF
Sbjct: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSFCGCVSDARKLF 180
Query: 181 DFVSFRDVALWNAMVAGYVKVAELNSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIA 240
D V F+DVALWNAMVAGYVKVAELNSARKVFD+MPQRNVISWTALIAGYAQTNRPD AI
Sbjct: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 301 KSGNIRRALEVFENMKHKSVITWSTMIAALALHGLGGEAIDMFLRMEKARVRPNEVTFIA 360
KSGNI RALEVFENMKHKSVITWSTMIAA+ALHGLGG+AIDMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
Query: 361 ILSACSHVGMVDVGRYYFDRMQSMYKTEPKIEHYGCMIDLLARAGYLQEAQKLLQDMPFE 420
ILSACSHVGMVDVGRYYF+RMQS+YK +P+IEHYGCMIDLLARAGYLQEAQ+L QDMP+E
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQELFQDMPYE 420
Query: 421 ANAAIWGSLLAASHIHRDAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAAS+ HRDAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGIYHVLCKIIVQLKMAGSLQEEW 540
KVMRNAGVKKAPGGSFIEINNRV+EFLAGD+S+SQLHGIY VLC IIVQLKMAGS EEW
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSESQLHGIYPVLCNIIVQLKMAGSYPEEW 540
BLAST of Lcy03g010710 vs. NCBI nr
Match:
KAG7023735.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 972.6 bits (2513), Expect = 1.4e-279
Identity = 487/540 (90.19%), Postives = 510/540 (94.44%), Query Frame = 0
Query: 1 MRWSLS-LCKSSSSFIKPAIFTTPLAFTSLLSSCRDPRHIYQIHGFMLHRALDQDNLLLS 60
MRWS S LCKSSSS ++ IF P A TSLLS+CRDPRHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1 MRWSFSRLCKSSSSLVESTIFAAPFALTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
Query: 61 RFIDACSSLGLSLYAFSVFSNKTHHDLRLYNTAIKALSQTSSPVSAISLYAKIRIEGLRP 120
RFI ACSSLGL LYAFSVFSNK H DLRLYNTA+KALSQTSSP++AISLY++I IEGLRP
Sbjct: 61 RFIHACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
Query: 121 DSYSIPFVLKAVVQLSAVQVGRQIHTQTVSSALDKDVNVVTSLIQMYSSCGCVSDARKLF 180
DSY+IPFVLKAVVQLSAV+VGRQIHTQTVSS LD DVNV TSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYTIPFVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
Query: 181 DFVSFRDVALWNAMVAGYVKVAELNSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIA 240
D V F+DVALWNAMVAGYVKVAELNSARKVFD+MPQRNVISWTALIAGYAQTNRPD AI
Sbjct: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 301 KSGNIRRALEVFENMKHKSVITWSTMIAALALHGLGGEAIDMFLRMEKARVRPNEVTFIA 360
KSGNI RALEVFENMKHKSVITWSTMIAA+ALHGLGG+AIDMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
Query: 361 ILSACSHVGMVDVGRYYFDRMQSMYKTEPKIEHYGCMIDLLARAGYLQEAQKLLQDMPFE 420
ILSACSHVGMVDVGRYYF+RMQS+YK +P+IEHYGCMIDLLARAGYLQEAQKL QDMP+E
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
Query: 421 ANAAIWGSLLAASHIHRDAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAAS+ HRDA+LAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGIYHVLCKIIVQLKMAGSLQEEW 540
KVMRNAGVKKAPGGSFIEINNRV+EFLAGD+SDSQLHGIY VLC IIVQLKMAGS EEW
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 540
BLAST of Lcy03g010710 vs. NCBI nr
Match:
XP_022960640.1 (pentatricopeptide repeat-containing protein At5g56310 [Cucurbita moschata])
HSP 1 Score: 962.6 bits (2487), Expect = 1.4e-276
Identity = 484/540 (89.63%), Postives = 509/540 (94.26%), Query Frame = 0
Query: 1 MRWSL-SLCKSSSSFIKPAIFTTPLAFTSLLSSCRDPRHIYQIHGFMLHRALDQDNLLLS 60
MRWSL LCKSSSSF++ P A TSLLS+CRDPRHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1 MRWSLFRLCKSSSSFVES---FAPSAITSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
Query: 61 RFIDACSSLGLSLYAFSVFSNKTHHDLRLYNTAIKALSQTSSPVSAISLYAKIRIEGLRP 120
RFIDACSSLGL LYA SVFSNK H DLRLYNTA+KALSQTSSP++AISLY++I IEGLRP
Sbjct: 61 RFIDACSSLGLYLYALSVFSNKAHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
Query: 121 DSYSIPFVLKAVVQLSAVQVGRQIHTQTVSSALDKDVNVVTSLIQMYSSCGCVSDARKLF 180
DSY+IPFVLKA+VQLSAV+VGRQIHTQTVSS LD DVNVVTSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYTIPFVLKAIVQLSAVEVGRQIHTQTVSSGLDTDVNVVTSLIQMYSSCGCVSDARKLF 180
Query: 181 DFVSFRDVALWNAMVAGYVKVAELNSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIA 240
D V F+DVALWNAMVAGYVKVAELNSARKVFD+MPQRNVISWTALIAGYAQTNRPD AI
Sbjct: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 301 KSGNIRRALEVFENMKHKSVITWSTMIAALALHGLGGEAIDMFLRMEKARVRPNEVTFIA 360
KSGNI RALEVFENMKHK+VITWSTMIAA+ALHGLGG+A DMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKNVITWSTMIAAMALHGLGGQATDMFLRMEKARVRPNEVTFIA 360
Query: 361 ILSACSHVGMVDVGRYYFDRMQSMYKTEPKIEHYGCMIDLLARAGYLQEAQKLLQDMPFE 420
ILSACSHVGMVDVGRYYF+RMQS+YK +P+IEHYGCMIDLLARAGYLQEAQKL QDMP+E
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
Query: 421 ANAAIWGSLLAASHIHRDAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAAS+ HRDA+LAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGIYHVLCKIIVQLKMAGSLQEEW 540
KVMRNAGVKKAPGGSFIEINNRV+EFLAGD+SDSQLHGIY VLC IIVQLKMAGS EEW
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEW 537
BLAST of Lcy03g010710 vs. NCBI nr
Match:
KAG6590068.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 959.1 bits (2478), Expect = 1.6e-275
Identity = 480/540 (88.89%), Postives = 508/540 (94.07%), Query Frame = 0
Query: 1 MRWSL-SLCKSSSSFIKPAIFTTPLAFTSLLSSCRDPRHIYQIHGFMLHRALDQDNLLLS 60
MRWSL SL KSSSS ++ IF + TSLLS+CRDPRHIYQIHGFMLHRALDQDNLLLS
Sbjct: 1 MRWSLSSLYKSSSSLVESTIFAATFSLTSLLSNCRDPRHIYQIHGFMLHRALDQDNLLLS 60
Query: 61 RFIDACSSLGLSLYAFSVFSNKTHHDLRLYNTAIKALSQTSSPVSAISLYAKIRIEGLRP 120
RFIDACSSLGL LYAFSVFSNK H DLRLYNTA+KALSQTSSP++A+SLY++I IEGLRP
Sbjct: 61 RFIDACSSLGLYLYAFSVFSNKAHPDLRLYNTAVKALSQTSSPINALSLYSRILIEGLRP 120
Query: 121 DSYSIPFVLKAVVQLSAVQVGRQIHTQTVSSALDKDVNVVTSLIQMYSSCGCVSDARKLF 180
DSY+IP VLKAVVQLSAV+VGRQIHTQTVSS LD DVNV TSLIQMYSSCGCVSDARKLF
Sbjct: 121 DSYTIPSVLKAVVQLSAVEVGRQIHTQTVSSGLDTDVNVATSLIQMYSSCGCVSDARKLF 180
Query: 181 DFVSFRDVALWNAMVAGYVKVAELNSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIA 240
D V F+DVALWNAMVAGYVKVAELNSARKVFD+MPQRNVISWTALIAGYAQTNRPD AI
Sbjct: 181 DLVDFKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
Query: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 301 KSGNIRRALEVFENMKHKSVITWSTMIAALALHGLGGEAIDMFLRMEKARVRPNEVTFIA 360
KSGNI RALEVFENMKHK+VITWSTMIAA+ALHGLGG+A DMFLRMEKARVRPNEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKNVITWSTMIAAMALHGLGGQATDMFLRMEKARVRPNEVTFIA 360
Query: 361 ILSACSHVGMVDVGRYYFDRMQSMYKTEPKIEHYGCMIDLLARAGYLQEAQKLLQDMPFE 420
ILSACSHVGMVDVGRYYF+RMQS+YK +P+IEHYGCMIDLLARAGYLQEAQKL QDMP+E
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPYE 420
Query: 421 ANAAIWGSLLAASHIHRDAELAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
ANAAIWGSLLAAS+ HRDA+LAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 481 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGIYHVLCKIIVQLKMAGSLQEEW 540
KVMRNAGVKKAPGGSFIEINNRV+EFLAGD+S+SQ+HGIY VLC IIVQLKMAGS EEW
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVHEFLAGDRSESQIHGIYPVLCNIIVQLKMAGSYPEEW 540
BLAST of Lcy03g010710 vs. TAIR 10
Match:
AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 529.6 bits (1363), Expect = 2.9e-150
Identity = 271/509 (53.24%), Postives = 371/509 (72.89%), Query Frame = 0
Query: 27 TSLLSSCRDPRHIYQIHGFMLHRALDQDNLLLSRFIDACSSLGLSLYAFSVFSNKTHHDL 86
TSL + + + Q H +M+ L++DNL +++FI+ACS+ G YA+SVF+++ +
Sbjct: 19 TSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNT 78
Query: 87 RLYNTAIKALSQTSSPVS---AISLYAKIRIEGLRPDSYSIPFVLKAVVQLSAVQVGRQI 146
L+NT I+ALS P + AI++Y K+ +PD+++ PFVLK V++S V GRQI
Sbjct: 79 YLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQI 138
Query: 147 HTQTVSSALDKDVNVVTSLIQMYSSCGCVSDARKLFDFVSFRDVALWNAMVAGYVKVAEL 206
H Q V D V+VVT LIQMY SCG + DARK+FD + +DV +WNA++AGY KV E+
Sbjct: 139 HGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEM 198
Query: 207 NSARKVFDEMP--QRNVISWTALIAGYAQTNRPDEAIALFRKMQLEKVEPDEIAMLAVLS 266
+ AR + + MP RN +SWT +I+GYA++ R EAI +F++M +E VEPDE+ +LAVLS
Sbjct: 199 DEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLS 258
Query: 267 ACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKHKSVIT 326
ACADLG+LELGE I +Y++ G+ R V L NA+IDMYAKSGNI +AL+VFE + ++V+T
Sbjct: 259 ACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVT 318
Query: 327 WSTMIAALALHGLGGEAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFDRMQ 386
W+T+IA LA HG G EA+ MF RM KA VRPN+VTFIAILSACSHVG VD+G+ F+ M+
Sbjct: 319 WTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMR 378
Query: 387 SMYKTEPKIEHYGCMIDLLARAGYLQEAQKLLQDMPFEANAAIWGSLLAASHIHRDAELA 446
S Y P IEHYGCMIDLL RAG L+EA ++++ MPF+ANAAIWGSLLAAS++H D EL
Sbjct: 379 SKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELG 438
Query: 447 EQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNR 506
E+AL L KLEP NSGNY LL+N Y+ LGRW+ES M+R +M+ GVKK G S IE+ NR
Sbjct: 439 ERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENR 498
Query: 507 VYEFLAGDKSDSQLHGIYHVLCKIIVQLK 531
VY+F++GD + Q+ I+ +L ++ +Q++
Sbjct: 499 VYKFISGDLTHPQVERIHEILQEMDLQIQ 527
BLAST of Lcy03g010710 vs. TAIR 10
Match:
AT2G20540.1 (mitochondrial editing factor 21 )
HSP 1 Score: 393.3 bits (1009), Expect = 3.2e-109
Identity = 195/487 (40.04%), Postives = 306/487 (62.83%), Query Frame = 0
Query: 26 FTSLLSSCRDPRHIYQIHGFMLHRALDQDNLLLSRFIDACSSLGLSLYAFSVFSNKTHHD 85
F L + +I+ ++ L Q + ++++ +D C + YA +F+ ++ +
Sbjct: 13 FIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPN 72
Query: 86 LRLYNTAIKALSQTSSPVSAISLYAKIRIEGLR-PDSYSIPFVLKAVVQLSAVQVGRQIH 145
+ LYN+ I+A + S I +Y ++ + PD ++ PF+ K+ L + +G+Q+H
Sbjct: 73 VFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVH 132
Query: 146 TQTVSSALDKDVNVVTSLIQMYSSCGCVSDARKLFDFVSFRDVALWNAMVAGYVKVAELN 205
V +LI MY + DA K+FD + RDV WN++++GY ++ ++
Sbjct: 133 GHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMK 192
Query: 206 SARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIALFRKMQLEKVEPDEIAMLAVLSACA 265
A+ +F M + ++SWTA+I+GY EA+ FR+MQL +EPDEI++++VL +CA
Sbjct: 193 KAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCA 252
Query: 266 DLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKHKSVITWST 325
LG+LELG+WIH Y E+ G + + NALI+MY+K G I +A+++F M+ K VI+WST
Sbjct: 253 QLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWST 312
Query: 326 MIAALALHGLGGEAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFDRMQSMY 385
MI+ A HG AI+ F M++A+V+PN +TF+ +LSACSHVGM G YFD M+ Y
Sbjct: 313 MISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDY 372
Query: 386 KTEPKIEHYGCMIDLLARAGYLQEAQKLLQDMPFEANAAIWGSLLAASHIHRDAELAEQA 445
+ EPKIEHYGC+ID+LARAG L+ A ++ + MP + ++ IWGSLL++ + ++A A
Sbjct: 373 QIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVA 432
Query: 446 LRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYE 505
+ HL +LEPE+ GNY LL+N YA LG+W + +RK++RN +KK PGGS IE+NN V E
Sbjct: 433 MDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQE 492
Query: 506 FLAGDKS 512
F++GD S
Sbjct: 493 FVSGDNS 499
BLAST of Lcy03g010710 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 384.8 bits (987), Expect = 1.1e-106
Identity = 186/493 (37.73%), Postives = 303/493 (61.46%), Query Frame = 0
Query: 42 IHGFMLHRALDQDNLLLSRFIDACSSLGLSLYAFSVFSNKTHHDLRLYNTAIKALSQTSS 101
+HG + A+ D + + I S G A VF+ D+ +N+ I Q S
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 102 PVSAISLYAKIRIEGLRPDSYSIPFVLKAVVQLSAVQVGRQIHTQTVSSALDKDVNVVTS 161
P A+ L+ K+ E ++ ++ VL A ++ ++ GRQ+ + + ++ ++ + +
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 162 LIQMYSSCGCVSDARKLFDFVSFRDVALWNAMVAGYVKVAELNSARKVFDEMPQRNVISW 221
++ MY+ CG + DA++LFD + +D W M+ GY + +AR+V + MPQ+++++W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 222 TALIAGYAQTNRPDEAIALFRKMQLEK-VEPDEIAMLAVLSACADLGALELGEWIHNYIE 281
ALI+ Y Q +P+EA+ +F ++QL+K ++ ++I +++ LSACA +GALELG WIH+YI+
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 282 KHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKHKSVITWSTMIAALALHGLGGEAID 341
KHG+ + +ALI MY+K G++ ++ EVF +++ + V WS MI LA+HG G EA+D
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452
Query: 342 MFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFDRMQSMYKTEPKIEHYGCMIDLL 401
MF +M++A V+PN VTF + ACSH G+VD F +M+S Y P+ +HY C++D+L
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512
Query: 402 ARAGYLQEAQKLLQDMPFEANAAIWGSLLAASHIHRDAELAEQALRHLAKLEPENSGNYT 461
R+GYL++A K ++ MP + ++WG+LL A IH + LAE A L +LEP N G +
Sbjct: 513 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHV 572
Query: 462 LLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGIYH 521
LLSN YA LG+W +RK MR G+KK PG S IEI+ ++EFL+GD + +Y
Sbjct: 573 LLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYG 632
Query: 522 VLCKIIVQLKMAG 534
L +++ +LK G
Sbjct: 633 KLHEVMEKLKSNG 645
BLAST of Lcy03g010710 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 384.0 bits (985), Expect = 1.9e-106
Identity = 225/630 (35.71%), Postives = 324/630 (51.43%), Query Frame = 0
Query: 28 SLLSSCRDPRHIYQIHGFMLHRALDQDNLLLSRFIDAC----SSLGLSLYAFSVFSNKTH 87
SLL +C+ + + IH M+ L N LS+ I+ C GL YA SVF
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLP-YAISVFKTIQE 97
Query: 88 HDLRLYNTAIKALSQTSSPVSAISLYAKIRIEGLRPDSYSIPFVLKAVVQLSAVQVGRQI 147
+L ++NT + + +S PVSA+ LY + GL P+SY+ PFVLK+ + A + G+QI
Sbjct: 98 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 157
Query: 148 HTQTVSSALDKDVNVVTSLIQMYSSCGCVSDARKLFDFVSFRDVALWNAMVAGYVKVAEL 207
H + D D+ V TSLI MY G + DA K+FD RDV + A++ GY +
Sbjct: 158 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 217
Query: 208 NSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIALFRKMQLEKVEPDE---------- 267
+A+K+FDE+P ++V+SW A+I+GYA+T EA+ LF+ M V PDE
Sbjct: 218 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 277
Query: 268 ------------------------------------------------------------ 327
Sbjct: 278 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 337
Query: 328 -------------------------------IAMLAVLSACADLGALELGEWIHNYIEKH 387
+ ML++L ACA LGA+++G WIH YI+K
Sbjct: 338 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 397
Query: 388 --GLCRIVPLYNALIDMYAKSGNIRRALEVFENMKHKSVITWSTMIAALALHGLGGEAID 447
G+ L +LIDMYAK G+I A +VF ++ HKS+ +W+ MI A+HG + D
Sbjct: 398 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFD 457
Query: 448 MFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFDRMQSMYKTEPKIEHYGCMIDLL 507
+F RM K ++P+++TF+ +LSACSH GM+D+GR+ F M YK PK+EHYGCMIDLL
Sbjct: 458 LFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLL 517
Query: 508 ARAGYLQEAQKLLQDMPFEANAAIWGSLLAASHIHRDAELAEQALRHLAKLEPENSGNYT 541
+G +EA++++ M E + IW SLL A +H + EL E +L K+EPEN G+Y
Sbjct: 518 GHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYV 577
BLAST of Lcy03g010710 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 378.3 bits (970), Expect = 1.1e-104
Identity = 197/494 (39.88%), Postives = 288/494 (58.30%), Query Frame = 0
Query: 28 SLLSSCRDPRHIYQIHGFMLHRALDQDNLLLSRFIDAC---SSLGLSLYAFSVFSNKTHH 87
S L C + QIH ML L QD+ +++F+ C +S YA VF
Sbjct: 19 SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 78
Query: 88 DLRLYNTAIKALSQTSSPVSAISLYAKIRIEGLRPDSYSIPFVLKAVVQLSAVQVGRQIH 147
D L+N I+ S + P ++ LY ++ ++Y+ P +LKA LSA + QIH
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 148 TQTVSSALDKDVNVVTSLIQMYSSCGCVSDARKLFDFVSFRDVALWNAMVAGYVKVAELN 207
Q + DV V SLI Y+ G A LFD + D WN+++ GYVK +++
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198
Query: 208 SARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIALFRKMQLEKVEPDEIAMLAVLSACA 267
A +F +M ++N ISWT +I+GY Q + EA+ LF +MQ VEPD +++ LSACA
Sbjct: 199 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 258
Query: 268 DLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKHKSVITWST 327
LGALE G+WIH+Y+ K + L LIDMYAK G + ALEVF+N+K KSV W+
Sbjct: 259 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318
Query: 328 MIAALALHGLGGEAIDMFLRMEKARVRPNEVTFIAILSACSHVGMVDVGRYYFDRMQSMY 387
+I+ A HG G EAI F+ M+K ++PN +TF A+L+ACS+ G+V+ G+ F M+ Y
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 378
Query: 388 KTEPKIEHYGCMIDLLARAGYLQEAQKLLQDMPFEANAAIWGSLLAASHIHRDAELAEQA 447
+P IEHYGC++DLL RAG L EA++ +Q+MP + NA IWG+LL A IH++ EL E+
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438
Query: 448 LRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYE 507
L ++P + G Y +N +A +W+++ R++M+ GV K PG S I + +E
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 498
Query: 508 FLAGDKSDSQLHGI 519
FLAGD+S ++ I
Sbjct: 499 FLAGDRSHPEIEKI 512
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9FMA1 | 4.0e-149 | 53.24 | Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX... | [more] |
Q9SIL5 | 4.5e-108 | 40.04 | Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... | [more] |
O82380 | 1.6e-105 | 37.73 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9LN01 | 2.7e-105 | 35.71 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9FJY7 | 1.5e-103 | 39.88 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1JID8 | 2.1e-281 | 91.09 | pentatricopeptide repeat-containing protein At5g56310 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1H9N0 | 6.9e-277 | 89.63 | pentatricopeptide repeat-containing protein At5g56310 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1D0Q9 | 5.6e-271 | 87.41 | pentatricopeptide repeat-containing protein At5g56310 OS=Momordica charantia OX=... | [more] |
A0A0A0LX33 | 9.0e-269 | 87.59 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G598880 PE=4 SV=1 | [more] |
A0A5D3CFJ6 | 1.9e-266 | 85.93 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
XP_022987264.1 | 4.3e-281 | 91.09 | pentatricopeptide repeat-containing protein At5g56310 [Cucurbita maxima] | [more] |
XP_023515616.1 | 1.6e-280 | 90.56 | pentatricopeptide repeat-containing protein At5g56310 [Cucurbita pepo subsp. pep... | [more] |
KAG7023735.1 | 1.4e-279 | 90.19 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022960640.1 | 1.4e-276 | 89.63 | pentatricopeptide repeat-containing protein At5g56310 [Cucurbita moschata] | [more] |
KAG6590068.1 | 1.6e-275 | 88.89 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
Match Name | E-value | Identity | Description | |
AT5G56310.1 | 2.9e-150 | 53.24 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G20540.1 | 3.2e-109 | 40.04 | mitochondrial editing factor 21 | [more] |
AT2G29760.1 | 1.1e-106 | 37.73 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G08070.1 | 1.9e-106 | 35.71 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G66520.1 | 1.1e-104 | 39.88 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |