Lcy03g010610 (gene) Sponge gourd (P93075) v1

Overview
NameLcy03g010610
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
LocationChr03: 44433667 .. 44434858 (+)
RNA-Seq ExpressionLcy03g010610
SyntenyLcy03g010610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTAAGATTCACTGTCCTTCATCCCTTTGCCTCTGTAAACCTTCCTCTCATATATATTCCACTGGATCAGTGCCACCGAATTTGGAAAACTCACCACATTTGCCTTCAGAAGTTGAGTCAGTCATTGGAACTTCTGGTTCCATTGTTGAGACCTTTGAATCCAAGCCAGAGTGCAGAGATGACAAAGAGCAGGAGAATGAGTATGGAATCAAGAGTAGTCTAAGGAAGCCAAGTTTGCGGTCAGGTGCTCCGGAGGAGAAGCATGTGAAAAAAGTACAATGGATGGATTTTTCAGGCAAAGAACTCGTTGAGATCAGGGAATTTGAACCTAGGTAACTTCTCTCACCCTTGTATTCTTTTCTATCTCTCACTCACATTTGAAAGTCAAGGACCTGGAAGGAGTGGAGAGGCTGTGCTCTCTGTTTTTTACATCTCATGAATCATGATTGAGAAGATCACATATCATCTAAATAATTGAAATACAGTATCTTCCTTTCATTTAATTATTTGATATTAGAATATTTACATCTCATGAATCATGTTTGAGATGATCAGATGTCATCTAAATAATTGAAATACAGTATCTTCCATTGATTTAATTATTTGATTTTAGAGAGAGAGAATCTTATTTGGGTTGGATCTTGTACTAGAATGGAATTCCCAAGTTACTTAAATAATCAAGTTATAAAATATAATATAGTCATATTGCGACAACATATTGAACTTCAATCAATTATAGGAGGTACTTAGCTTTATGGAAGTGGGAAAAGAGGAAGTGATGAAATAAATGGACTTAGGGGGTGGAACTGCAATTGTGTTGGATGCTTAAGATGTTCATACCAGTTTAAAATTTGAGAAAATGAAGAAACGATATATAGAAAAATTACCATTCTAAAGATGCTCGAGAGTGATGCTTCATGTCCTTATTTCTAAATCCTAGGAAGAGCTAGCAAACCAACAGTTGGGATTGGAATGTCCAAATTTGAATTTTCCTCACGATGACTGCTGTTTTCTGCTTGTTCAGTTTATCAAGTCACACTTGATTGCAACTTCTGTGAATGAATTATGCATACCGACAACTGATTGTTTACGTGTGTGCGTGCACATGTTTTTCTTATGCGACAGTGAAGTTGAAGATTCTGATTATGAAGATGAGGATAACAGAAGCTGCATCTGTACTATTTTATGA

mRNA sequence

ATGTGTAAGATTCACTGTCCTTCATCCCTTTGCCTCTGTAAACCTTCCTCTCATATATATTCCACTGGATCAGTGCCACCGAATTTGGAAAACTCACCACATTTGCCTTCAGAAGTTGAGTCAGTCATTGGAACTTCTGGTTCCATTGTTGAGACCTTTGAATCCAAGCCAGAGTGCAGAGATGACAAAGAGCAGGAGAATGAGTATGGAATCAAGAGTAGTCTAAGGAAGCCAAGTTTGCGGTCAGGTGCTCCGGAGGAGAAGCATGTGAAAAAAGTACAATGGATGGATTTTTCAGGCAAAGAACTCGTTGAGATCAGGGAATTTGAACCTAGTGAAGTTGAAGATTCTGATTATGAAGATGAGGATAACAGAAGCTGCATCTGTACTATTTTATGA

Coding sequence (CDS)

ATGTGTAAGATTCACTGTCCTTCATCCCTTTGCCTCTGTAAACCTTCCTCTCATATATATTCCACTGGATCAGTGCCACCGAATTTGGAAAACTCACCACATTTGCCTTCAGAAGTTGAGTCAGTCATTGGAACTTCTGGTTCCATTGTTGAGACCTTTGAATCCAAGCCAGAGTGCAGAGATGACAAAGAGCAGGAGAATGAGTATGGAATCAAGAGTAGTCTAAGGAAGCCAAGTTTGCGGTCAGGTGCTCCGGAGGAGAAGCATGTGAAAAAAGTACAATGGATGGATTTTTCAGGCAAAGAACTCGTTGAGATCAGGGAATTTGAACCTAGTGAAGTTGAAGATTCTGATTATGAAGATGAGGATAACAGAAGCTGCATCTGTACTATTTTATGA

Protein sequence

MCKIHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPECRDDKEQENEYGIKSSLRKPSLRSGAPEEKHVKKVQWMDFSGKELVEIREFEPSEVEDSDYEDEDNRSCICTIL
Homology
[Close]
BLAST of Lcy03g010610 vs. ExPASy TrEMBL
Match: A0A1S4DZ54 (uncharacterized protein LOC103492420 OS=Cucumis melo OX=3656 GN=LOC103492420 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 5.0e-56
Identity = 114/135 (84.44%), Postives = 120/135 (88.89%), Query Frame = 0 

Query: 1   MCKIHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPECR 60
           MCKIHCPSS CLC+P+ HIYSTGS+P +LENS HLPSEVESVIGTSGSIVET ESK ECR
Sbjct: 5   MCKIHCPSSFCLCQPAPHIYSTGSIPLDLENSSHLPSEVESVIGTSGSIVETLESKQECR 64

Query: 61  ---DDKEQENEYGIKSSLRKPSLRSGAPEEKHVKKVQWMDFSGKELVEIREFEPSEVEDS 120
              DDK QENEYGIKSSLRKPSLRSG  +EKHVK+VQWMDFSGKELVEIREFE SE EDS
Sbjct: 65  DESDDKVQENEYGIKSSLRKPSLRSGVSKEKHVKRVQWMDFSGKELVEIREFEASEAEDS 124

Query: 121 DYEDEDNRSCICTIL 133
           DYE EDNRSCICTIL
Sbjct: 125 DYESEDNRSCICTIL 139

[Close]
BLAST of Lcy03g010610 vs. ExPASy TrEMBL
Match: A0A6J1D1Z7 (uncharacterized protein LOC111016556 OS=Momordica charantia OX=3673 GN=LOC111016556 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.2e-54
Identity = 111/132 (84.09%), Postives = 117/132 (88.64%), Query Frame = 0 

Query: 1   MCKIHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPECR 60
           MCKIHCPSS CLC+PS  I +TGSVP  LENSPHLPSEVE+VIGTS SIV+TFE K ECR
Sbjct: 5   MCKIHCPSSFCLCQPSPQINTTGSVPLKLENSPHLPSEVEAVIGTSVSIVDTFEFKQECR 64

Query: 61  DDKEQENEYGIKSSLRKPSLRSGAPEEKHVKKVQWMDFSGKELVEIREFEPSEVEDSDYE 120
           DDKEQE EYGIKSSLRK SL+ GAPE KH KKVQWMDFSGKELVEIREFEPSE ED+DYE
Sbjct: 65  DDKEQEPEYGIKSSLRKTSLKLGAPEGKHAKKVQWMDFSGKELVEIREFEPSEGEDTDYE 124

Query: 121 DEDNRSCICTIL 133
           DEDNRSCICTIL
Sbjct: 125 DEDNRSCICTIL 136

[Close]
BLAST of Lcy03g010610 vs. ExPASy TrEMBL
Match: A0A0A0M2C9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599500 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.7e-54
Identity = 112/135 (82.96%), Postives = 118/135 (87.41%), Query Frame = 0 

Query: 1   MCKIHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPECR 60
           MCKIHCPSS CLC+P+ HIYSTGS+P +LENS HLPSEVESVIGTS SIVET ESK ECR
Sbjct: 5   MCKIHCPSSFCLCQPAPHIYSTGSIPLDLENSSHLPSEVESVIGTSVSIVETLESKQECR 64

Query: 61  D---DKEQENEYGIKSSLRKPSLRSGAPEEKHVKKVQWMDFSGKELVEIREFEPSEVEDS 120
           D   DK QENEYGIKSSLRK SLRSG  +EKHVK+VQWMDFSGKELVEIREFE SE EDS
Sbjct: 65  DESGDKVQENEYGIKSSLRKSSLRSGVSKEKHVKRVQWMDFSGKELVEIREFEASEAEDS 124

Query: 121 DYEDEDNRSCICTIL 133
           DYE EDNRSCICTIL
Sbjct: 125 DYESEDNRSCICTIL 139

[Close]
BLAST of Lcy03g010610 vs. ExPASy TrEMBL
Match: A0A5D3CDR2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001000 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.5e-44
Identity = 95/113 (84.07%), Postives = 101/113 (89.38%), Query Frame = 0 

Query: 1   MCKIHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPECR 60
           MCKIHCPSS CLC+P+ HIYSTGS+P +LENS HLPSEVESVIGTSGSIVET ESK ECR
Sbjct: 5   MCKIHCPSSFCLCQPAPHIYSTGSIPLDLENSSHLPSEVESVIGTSGSIVETLESKQECR 64

Query: 61  ---DDKEQENEYGIKSSLRKPSLRSGAPEEKHVKKVQWMDFSGKELVEIREFE 111
              DDK QENEYGIKSSLRKPSLRSG  +EKHVK+VQWMDFSGKELVEIREFE
Sbjct: 65  DESDDKVQENEYGIKSSLRKPSLRSGVSKEKHVKRVQWMDFSGKELVEIREFE 117

[Close]
BLAST of Lcy03g010610 vs. ExPASy TrEMBL
Match: A0A6J1EXK0 (uncharacterized protein LOC111439183 OS=Cucurbita moschata OX=3662 GN=LOC111439183 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.8e-43
Identity = 97/132 (73.48%), Postives = 105/132 (79.55%), Query Frame = 0 

Query: 1   MCKIHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPECR 60
           MCKIHCPSSLCLC+PS HI+STGSV  +L+NSPHLPS    VI TSGS VET E K    
Sbjct: 5   MCKIHCPSSLCLCQPSPHIHSTGSVSLDLQNSPHLPSRDVPVIETSGSSVETLEPK---- 64

Query: 61  DDKEQENEYGIKSSLRKPSLRSGAPEEKHVKKVQWMDFSGKELVEIREFEPSEVEDSDYE 120
            DK  E+E+G KSSLRKP+ RSG  +EKHVK VQWMDFSGKEL EIREFE SE EDSDYE
Sbjct: 65  RDKGPESEFGNKSSLRKPNSRSGVSKEKHVKTVQWMDFSGKELAEIREFEASEDEDSDYE 124

Query: 121 DEDNRSCICTIL 133
           DEDN SCICTIL
Sbjct: 125 DEDNGSCICTIL 132

[Close]
BLAST of Lcy03g010610 vs. NCBI nr
Match: XP_016901000.1 (PREDICTED: uncharacterized protein LOC103492420 [Cucumis melo])

HSP 1 Score: 226.9 bits (577), Expect = 1.0e-55
Identity = 114/135 (84.44%), Postives = 120/135 (88.89%), Query Frame = 0 

Query: 1   MCKIHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPECR 60
           MCKIHCPSS CLC+P+ HIYSTGS+P +LENS HLPSEVESVIGTSGSIVET ESK ECR
Sbjct: 5   MCKIHCPSSFCLCQPAPHIYSTGSIPLDLENSSHLPSEVESVIGTSGSIVETLESKQECR 64

Query: 61  ---DDKEQENEYGIKSSLRKPSLRSGAPEEKHVKKVQWMDFSGKELVEIREFEPSEVEDS 120
              DDK QENEYGIKSSLRKPSLRSG  +EKHVK+VQWMDFSGKELVEIREFE SE EDS
Sbjct: 65  DESDDKVQENEYGIKSSLRKPSLRSGVSKEKHVKRVQWMDFSGKELVEIREFEASEAEDS 124

Query: 121 DYEDEDNRSCICTIL 133
           DYE EDNRSCICTIL
Sbjct: 125 DYESEDNRSCICTIL 139

[Close]
BLAST of Lcy03g010610 vs. NCBI nr
Match: XP_022147688.1 (uncharacterized protein LOC111016556 [Momordica charantia])

HSP 1 Score: 222.2 bits (565), Expect = 2.6e-54
Identity = 111/132 (84.09%), Postives = 117/132 (88.64%), Query Frame = 0 

Query: 1   MCKIHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPECR 60
           MCKIHCPSS CLC+PS  I +TGSVP  LENSPHLPSEVE+VIGTS SIV+TFE K ECR
Sbjct: 5   MCKIHCPSSFCLCQPSPQINTTGSVPLKLENSPHLPSEVEAVIGTSVSIVDTFEFKQECR 64

Query: 61  DDKEQENEYGIKSSLRKPSLRSGAPEEKHVKKVQWMDFSGKELVEIREFEPSEVEDSDYE 120
           DDKEQE EYGIKSSLRK SL+ GAPE KH KKVQWMDFSGKELVEIREFEPSE ED+DYE
Sbjct: 65  DDKEQEPEYGIKSSLRKTSLKLGAPEGKHAKKVQWMDFSGKELVEIREFEPSEGEDTDYE 124

Query: 121 DEDNRSCICTIL 133
           DEDNRSCICTIL
Sbjct: 125 DEDNRSCICTIL 136

[Close]
BLAST of Lcy03g010610 vs. NCBI nr
Match: XP_004144070.1 (uncharacterized protein LOC101217749 [Cucumis sativus] >KGN66356.1 hypothetical protein Csa_006876 [Cucumis sativus])

HSP 1 Score: 220.3 bits (560), Expect = 9.8e-54
Identity = 112/135 (82.96%), Postives = 118/135 (87.41%), Query Frame = 0 

Query: 1   MCKIHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPECR 60
           MCKIHCPSS CLC+P+ HIYSTGS+P +LENS HLPSEVESVIGTS SIVET ESK ECR
Sbjct: 5   MCKIHCPSSFCLCQPAPHIYSTGSIPLDLENSSHLPSEVESVIGTSVSIVETLESKQECR 64

Query: 61  D---DKEQENEYGIKSSLRKPSLRSGAPEEKHVKKVQWMDFSGKELVEIREFEPSEVEDS 120
           D   DK QENEYGIKSSLRK SLRSG  +EKHVK+VQWMDFSGKELVEIREFE SE EDS
Sbjct: 65  DESGDKVQENEYGIKSSLRKSSLRSGVSKEKHVKRVQWMDFSGKELVEIREFEASEAEDS 124

Query: 121 DYEDEDNRSCICTIL 133
           DYE EDNRSCICTIL
Sbjct: 125 DYESEDNRSCICTIL 139

[Close]
BLAST of Lcy03g010610 vs. NCBI nr
Match: XP_038879679.1 (uncharacterized protein LOC120071456 [Benincasa hispida])

HSP 1 Score: 214.9 bits (546), Expect = 4.1e-52
Identity = 109/132 (82.58%), Postives = 115/132 (87.12%), Query Frame = 0 

Query: 1   MCKIHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPECR 60
           MCKIHCPSS CLC+PS HIYSTGSVP +LENSPHLPSEV+SVIG S SIVETFESK ECR
Sbjct: 5   MCKIHCPSSFCLCQPSPHIYSTGSVPLDLENSPHLPSEVDSVIGISDSIVETFESKQECR 64

Query: 61  DDKEQENEYGIKSSLRKPSLRSGAPEEKHVKKVQWMDFSGKELVEIREFEPSEVEDSDYE 120
           DDKE      IKSSL+KPSLRS  P+EKHVK+VQWMDFSGKELVEIREFEPSE EDSDYE
Sbjct: 65  DDKESV----IKSSLKKPSLRSAIPKEKHVKRVQWMDFSGKELVEIREFEPSEAEDSDYE 124

Query: 121 DEDNRSCICTIL 133
            E NRSCICTIL
Sbjct: 125 GEYNRSCICTIL 132

[Close]
BLAST of Lcy03g010610 vs. NCBI nr
Match: KAA0055721.1 (uncharacterized protein E6C27_scaffold181G001040 [Cucumis melo var. makuwa] >TYK09971.1 uncharacterized protein E5676_scaffold16G001000 [Cucumis melo var. makuwa])

HSP 1 Score: 188.7 bits (478), Expect = 3.1e-44
Identity = 95/113 (84.07%), Postives = 101/113 (89.38%), Query Frame = 0 

Query: 1   MCKIHCPSSLCLCKPSSHIYSTGSVPPNLENSPHLPSEVESVIGTSGSIVETFESKPECR 60
           MCKIHCPSS CLC+P+ HIYSTGS+P +LENS HLPSEVESVIGTSGSIVET ESK ECR
Sbjct: 5   MCKIHCPSSFCLCQPAPHIYSTGSIPLDLENSSHLPSEVESVIGTSGSIVETLESKQECR 64

Query: 61  ---DDKEQENEYGIKSSLRKPSLRSGAPEEKHVKKVQWMDFSGKELVEIREFE 111
              DDK QENEYGIKSSLRKPSLRSG  +EKHVK+VQWMDFSGKELVEIREFE
Sbjct: 65  DESDDKVQENEYGIKSSLRKPSLRSGVSKEKHVKRVQWMDFSGKELVEIREFE 117

[Close]
BLAST of Lcy03g010610 vs. TAIR 10
Match: AT3G13480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 89.7 bits (221), Expect = 1.9e-18
Identity = 59/158 (37.34%), Postives = 79/158 (50.00%), Query Frame = 0 

Query: 1   MCKIHCPSSLCLCKPSSHIYSTGSV---------------------PPNLENSPHLPSEV 60
           +CKI CPS +C CKPS HIY++GS+                       N ++  H+  E 
Sbjct: 17  LCKIQCPSFICFCKPSPHIYASGSLKLENTFPQVSSSTTVVDDRDHDDNDDDDAHVEEEE 76

Query: 61  ESVIGTSGSIVETFESKPECRDDKEQENE-----YGIKSSLRKPSLRSGAPEEKHVKKVQ 120
             V    G + E    +    + K++E E       +KSSL+K  L S     K  KKVQ
Sbjct: 77  VVVDHVDGLLTEVVREEDCALEGKKEEEESLSNGEILKSSLKKEVLDSADGGRKEKKKVQ 136

Query: 121 WMDFSGKELVEIREFEPSEVEDSDYEDEDNRSCICTIL 133
           W+D  GKEL EIREFE SE ED  Y+ +  +SC+C IL
Sbjct: 137 WVDLMGKELAEIREFESSEEEDVRYDGD--QSCVCVIL 172

[Close]
BLAST of Lcy03g010610 vs. TAIR 10
Match: AT1G55475.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 3.2e-10
Identity = 36/77 (46.75%), Postives = 48/77 (62.34%), Query Frame = 0 

Query: 61  DDKEQENE-----YGIKSSLRKPSLRSGAPEEKHVKKVQWMDFSGKELVEIREFEPSEVE 120
           D KE+E +       +KSSLRK    S   E++  KKVQW+D  GKEL EIREFEPS+ +
Sbjct: 46  DAKEEEGQIVGDTLTLKSSLRKVDSNSTEAEKREKKKVQWVDVIGKELAEIREFEPSDED 105

Query: 121 DSDYEDEDNRSCICTIL 133
           D D   +  ++C+C IL
Sbjct: 106 DID--SDRGKTCVCIIL 120

[Close]
BLAST of Lcy03g010610 vs. TAIR 10
Match: AT1G34010.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22790.2); Has 74 Blast hits to 74 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 3.9e-08
Identity = 32/82 (39.02%), Postives = 46/82 (56.10%), Query Frame = 0 

Query: 64  EQENEYGIKSSLRKPSL-----------RSGAPEEKHVKKVQWMDFSGKELVEIREFEPS 123
           E  N + +KSSL+K S            R G  +    +KVQW D  G E+ E+REFEPS
Sbjct: 101 EVTNRFALKSSLKKRSFSDVVIGDDDVSRDGVVDHIDRRKVQWPDTCGIEIAEVREFEPS 160

Query: 124 EVEDS--DYEDEDNRSCICTIL 133
           EV++S  ++     +SC+CTI+
Sbjct: 161 EVDESEDEFHHGSGKSCMCTIM 182

[Close]
BLAST of Lcy03g010610 vs. TAIR 10
Match: AT2G33390.1 (unknown protein; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 4.7e-06
Identity = 33/85 (38.82%), Postives = 47/85 (55.29%), Query Frame = 0 

Query: 48  SIVETFESKPECRDDKEQENEYGIKSSLRKPSLRSGAPEEKHVKKVQWMDFSGKELVEIR 107
           +IV    S+ E +  +E+E+E       RK  +      +K  + VQW D  G  L E+ 
Sbjct: 18  AIVSLNSSEIEDQIFEEEESESQCLLPPRKGGMSRST--DKIKRTVQWNDIKGDNLAEVL 77

Query: 108 EFEPSEVEDSDYEDEDNRSCICTIL 133
            +EPSEV  SD ED+D+ SCICTI+
Sbjct: 78  VYEPSEV--SDTEDDDSDSCICTIM 98

[Close]
BLAST of Lcy03g010610 vs. TAIR 10
Match: AT1G22790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34010.1); Has 67 Blast hits to 67 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 6.8e-05
Identity = 21/44 (47.73%), Postives = 29/44 (65.91%), Query Frame = 0 

Query: 91  KKVQWMDFSGKELVEIREFEPSE--VEDSDYEDEDNRSCICTIL 133
           +KVQW D  G EL ++REFEPSE  + D ++E    R+C C I+
Sbjct: 173 RKVQWPDACGSELTQVREFEPSEMGLSDEEWEVGRQRTCSCVIM 216

The following BLAST results are available for this feature:
BLAST of Lcy03g010610 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy03g010610 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4DZ545.0e-5684.44uncharacterized protein LOC103492420 OS=Cucumis melo OX=3656 GN=LOC103492420 PE=... [more]
A0A6J1D1Z71.2e-5484.09uncharacterized protein LOC111016556 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
A0A0A0M2C94.7e-5482.96Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599500 PE=4 SV=1[more]
A0A5D3CDR21.5e-4484.07Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1EXK03.8e-4373.48uncharacterized protein LOC111439183 OS=Cucurbita moschata OX=3662 GN=LOC1114391... [more]
BLAST of Lcy03g010610 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016901000.11.0e-5584.44PREDICTED: uncharacterized protein LOC103492420 [Cucumis melo][more]
XP_022147688.12.6e-5484.09uncharacterized protein LOC111016556 [Momordica charantia][more]
XP_004144070.19.8e-5482.96uncharacterized protein LOC101217749 [Cucumis sativus] >KGN66356.1 hypothetical ... [more]
XP_038879679.14.1e-5282.58uncharacterized protein LOC120071456 [Benincasa hispida][more]
KAA0055721.13.1e-4484.07uncharacterized protein E6C27_scaffold181G001040 [Cucumis melo var. makuwa] >TYK... [more]
BLAST of Lcy03g010610 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G13480.11.9e-1837.34unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G55475.13.2e-1046.75unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G34010.13.9e-0839.02unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G33390.14.7e-0638.82unknown protein; Has 34 Blast hits to 34 proteins in 10 species: Archae - 0; Bac... [more]
AT1G22790.16.8e-0547.73unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..88
NoneNo IPR availablePANTHERPTHR33401LIGHT-HARVESTING COMPLEX-LIKE PROTEIN OHP2, CHLOROPLASTICcoord: 2..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy03g010610.1Lcy03g010610.1mRNA