Lcy03g010250 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCACTTATGCTACATTGGCGCCTTCTCCACTCTCTTTCCCTTCCACTTCCATGGCGGTCCAGAGAGAGAACGAGGCATACTGGGAGAGAATATCGAACCTCGAATGGAGCAAAGCAAGGGAGAGGATGATCGAAGAACAGGCAAAGGCGGAATTAGAAGCTCTCCAACTTCTTCACCCCGATCGTTTCGAATACCTCAAGCTCGAGCTCAAATCCTTCATCCAACTCCTTCGATCGCAATCGCAATCGCAATCGGAAGAGCTTTTTCATCAGCCGAACACTGTCGAAGCCTCGAGACGCTCGCCTTGCTCTCTCGCTCTCGATTCGCAAGGTCAGTTGCCGCTCTGCTGTCCGCAGTTCGCTCCATCTCTCTCAGTGTAGAATTAGCAATATTCTCCTCTTCTTCCTTTTCTTCTTGTTTACTGATTCATGTGTTTTGGAGCAGAGTCGAGCAGTTGTAGGAAGAGGAGGAAGACGGACGAAGGAGGAGAGAAGAAAATGTACGGAAACGGATTAGAGAGAGAGGTTGCTGAATCGGAGAGGGGAGAGGAGATCGGACGGCGGAGGAACAGAGTGGATGTGGTTCTGGAAAGAGCCGTCGTTTGTCTCCGGAAGATTCGACGCTTCAAAACGGCTCTGTTTTCCACCGCCGATTGACGACGGCGCTCCATTTTCCTGTCGCCTTAAAGGTGCTGCTCCGATCTCTCTCTTTTTCTCTCTATGCCATAAAATTGCCGCACGTGTGTAAAATTTTCAAACTCGGTAGGGACTAGGGATAAACTTTTCAATTTTGTGGGGGTGTGTGTGAAATTGTCCTCATTCTTAAGGTCAAATTTGCAGTAAAAAGAAAATGATCACTTCGTAATCGGATGGAAGAGTTCTTATCCAAAATTTTGTCAATTGTACAAATATGCATATTATATTTTGTTAGCCTATTCTACTTATGCTACATTACACTAAA TCCACTTATGCTACATTGGCGCCTTCTCCACTCTCTTTCCCTTCCACTTCCATGGCGGTCCAGAGAGAGAACGAGGCATACTGGGAGAGAATATCGAACCTCGAATGGAGCAAAGCAAGGGAGAGGATGATCGAAGAACAGGCAAAGGCGGAATTAGAAGCTCTCCAACTTCTTCACCCCGATCGTTTCGAATACCTCAAGCTCGAGCTCAAATCCTTCATCCAACTCCTTCGATCGCAATCGCAATCGCAATCGGAAGAGCTTTTTCATCAGCCGAACACTGTCGAAGCCTCGAGACGCTCGCCTTGCTCTCTCGCTCTCGATTCGCAAGAGTCGAGCAGTTGTAGGAAGAGGAGGAAGACGGACGAAGGAGGAGAGAAGAAAATGTACGGAAACGGATTAGAGAGAGAGGTTGCTGAATCGGAGAGGGGAGAGGAGATCGGACGGCGGAGGAACAGAGTGGATGTGGTTCTGGAAAGAGCCGTCGTTTGTCTCCGGAAGATTCGACGCTTCAAAACGGCTCTGTTTTCCACCGCCGATTGACGACGGCGCTCCATTTTCCTGTCGCCTTAAAGGTGCTGCTCCGATCTCTCTCTTTTTCTCTCTATGCCATAAAATTGCCGCACGTGTGTAAAATTTTCAAACTCGGTAGGGACTAGGGATAAACTTTTCAATTTTGTGGGGGTGTGTGTGAAATTGTCCTCATTCTTAAGGTCAAATTTGCAGTAAAAAGAAAATGATCACTTCGTAATCGGATGGAAGAGTTCTTATCCAAAATTTTGTCAATTGTACAAATATGCATATTATATTTTGTTAGCCTATTCTACTTATGCTACATTACACTAAA ATGGCGGTCCAGAGAGAGAACGAGGCATACTGGGAGAGAATATCGAACCTCGAATGGAGCAAAGCAAGGGAGAGGATGATCGAAGAACAGGCAAAGGCGGAATTAGAAGCTCTCCAACTTCTTCACCCCGATCGTTTCGAATACCTCAAGCTCGAGCTCAAATCCTTCATCCAACTCCTTCGATCGCAATCGCAATCGCAATCGGAAGAGCTTTTTCATCAGCCGAACACTGTCGAAGCCTCGAGACGCTCGCCTTGCTCTCTCGCTCTCGATTCGCAAGAGTCGAGCAGTTGTAGGAAGAGGAGGAAGACGGACGAAGGAGGAGAGAAGAAAATGTACGGAAACGGATTAGAGAGAGAGGTTGCTGAATCGGAGAGGGGAGAGGAGATCGGACGGCGGAGGAACAGAGTGGATGTGGTTCTGGAAAGAGCCGTCGTTTGTCTCCGGAAGATTCGACGCTTCAAAACGGCTCTGTTTTCCACCGCCGATTGA MAVQRENEAYWERISNLEWSKARERMIEEQAKAELEALQLLHPDRFEYLKLELKSFIQLLRSQSQSQSEELFHQPNTVEASRRSPCSLALDSQESSSCRKRRKTDEGGEKKMYGNGLEREVAESERGEEIGRRRNRVDVVLERAVVCLRKIRRFKTALFSTAD Homology
BLAST of Lcy03g010250 vs. ExPASy TrEMBL
Match: A0A6J1F625 (uncharacterized protein LOC111441161 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441161 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 1.1e-55 Identity = 123/151 (81.46%), Postives = 141/151 (93.38%), Query Frame = 0
BLAST of Lcy03g010250 vs. ExPASy TrEMBL
Match: A0A6J1F0Z4 (uncharacterized protein LOC111441161 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441161 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 2.6e-54 Identity = 123/152 (80.92%), Postives = 141/152 (92.76%), Query Frame = 0
BLAST of Lcy03g010250 vs. ExPASy TrEMBL
Match: A0A6J1HZP5 (uncharacterized protein LOC111467682 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467682 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 7.1e-52 Identity = 120/150 (80.00%), Postives = 138/150 (92.00%), Query Frame = 0
BLAST of Lcy03g010250 vs. ExPASy TrEMBL
Match: A0A6J1HY07 (uncharacterized protein LOC111467682 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467682 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.8e-50 Identity = 120/151 (79.47%), Postives = 138/151 (91.39%), Query Frame = 0
BLAST of Lcy03g010250 vs. ExPASy TrEMBL
Match: A0A6J1DT63 (uncharacterized protein LOC111024084 OS=Momordica charantia OX=3673 GN=LOC111024084 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 3.3e-41 Identity = 112/151 (74.17%), Postives = 119/151 (78.81%), Query Frame = 0
BLAST of Lcy03g010250 vs. NCBI nr
Match: KAG7022043.1 (hypothetical protein SDJN02_15772, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 238.0 bits (606), Expect = 5.6e-59 Identity = 130/160 (81.25%), Postives = 148/160 (92.50%), Query Frame = 0
BLAST of Lcy03g010250 vs. NCBI nr
Match: XP_023531053.1 (uncharacterized protein LOC111793421 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 231.5 bits (589), Expect = 5.2e-57 Identity = 126/151 (83.44%), Postives = 143/151 (94.70%), Query Frame = 0
BLAST of Lcy03g010250 vs. NCBI nr
Match: XP_022933880.1 (uncharacterized protein LOC111441161 isoform X2 [Cucurbita moschata] >KAG6588149.1 hypothetical protein SDJN03_16714, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 226.1 bits (575), Expect = 2.2e-55 Identity = 123/151 (81.46%), Postives = 141/151 (93.38%), Query Frame = 0
BLAST of Lcy03g010250 vs. NCBI nr
Match: XP_022933879.1 (uncharacterized protein LOC111441161 isoform X1 [Cucurbita moschata]) HSP 1 Score: 221.5 bits (563), Expect = 5.4e-54 Identity = 123/152 (80.92%), Postives = 141/152 (92.76%), Query Frame = 0
BLAST of Lcy03g010250 vs. NCBI nr
Match: XP_022968454.1 (uncharacterized protein LOC111467682 isoform X2 [Cucurbita maxima]) HSP 1 Score: 213.4 bits (542), Expect = 1.5e-51 Identity = 120/150 (80.00%), Postives = 138/150 (92.00%), Query Frame = 0
BLAST of Lcy03g010250 vs. TAIR 10
Match: AT5G36960.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 58.9 bits (141), Expect = 4.3e-09 Identity = 53/150 (35.33%), Postives = 79/150 (52.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
|