Lcy03g009820 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g009820
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	zinc finger CCCH domain-containing protein 14-like
Location	Chr03: 43266193 .. 43269692 (+)
RNA-Seq Expression	Lcy03g009820
Synteny	Lcy03g009820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTATCAAACCCTATTTTGACCTAATTTTCAAATCCGCCCCTCTCTCTTCTTTCCATATCCAGCTCCTCCTCCTCCTTATTAGGGTTTCCACATTCACTTCTCCCGCTGCTTCATTCCCAATTTTTCTCTTCTCTAACGCTTCCTCTTCTTCCCTTGAGTATTGGGTCGTCTTCGCTTCTCTCTTCAATGGACCCTGACGGCGTTCGCAAGAGGGAAAGAACTGAAACCGCCTTGAATGGCAATGGCGCCTTTAAGAAGTCCAAACCAGGTTCGTTATGCTTCATAAATGCACCTCTTGGACTACTTTTTTTTTTTTCTTTTCTTTTGGGCATTCTCAACGGCTTTGGTGTTTCCTCATTTAGCTCGTTCTTGGGTCGTGTTTCTCTTGCTTGGTGTGAGTGAAATATTGGTAGTGTGTGAATGCTGACTTCTATTTGTTTGGTTCAAATGAAAAGGTAGTGGATTTCTTATTATGGAACATATTTCAATGTTCTTTCAGTTTGCCAGACTAGTCATTGCCTTTTATCCTTTAACCGTGTAGCTTGCTCTCTGTTTGAGTATATGGATGTGGGTATAGTGTTTTAGTCTTTTGTTCTCTCTTTGGTTTGGAGTATCGTCATTTGGTTTTTTTTGGTAGTATGTGGAATTTGCTTTAGGTATTTGGTTAATCATTGTAATGTCTTCTTTTGAGTTCTGGTTAAGGTTTTTGGATGTGAGTTCACGAGACTACTGTTTATGGCCTCGATGGAAGTCAACTTGCACATCCTTGTTTGGAGTTAATTTTTTTACCCCGGCAGTTTCAATTTATAGGGCTATAAAGTACAAGCTATGTACACATCTTTTTGCGTCACTCCCTTTTGCCACTGTTTGTTGTTAACTTTTGATGTAGAAGAAATAATTTTGTTTTTTATTCTGTTTCTTAATTGATTTAATTGTTATGTTATCCCAATCTTTGATGACTTTACTGTTTTTATCTCGGTAAATAAAACAATGTGAAAGTTGGTATTATACAATTTTCTTTCTTACTCCAAGCCAGTGTAGTTATTAATTTAAATGGAAATAGATGGTTTAAATTTTGAGATATGTTTTGTTTTAGCATATAAAGTTTGGAATGTAGTTGTCTTTCTTTTTCCTCCTGCTGGCCCTTTTCACCGTCTTAAATAGTAGTGTCTTGTCTGAGTGATGAAAGATGGTAAAAACAATATTAGATATTTTAAGCTGGGAGATCAACAATACGCTGGAATTTTAACTAAGGAAAGTTAATTAATGTTCTGCGACAGAAATGGACTCCTTATCTACTGGTTTAGGAAGCAAATCGAGGCCTTGCACAAAGTTTTTCAGGTTCTAATCTTAACTTATCTAAAATGAATTAATATAATGCAGTCAATCTATTCTTAATATTTTTTTAATTTCCAGAAAGATTTGCTTAATTTTCTCAAGTGAAATTATTGTGATTTGGACTAATGAATTGGTTAGTTAAAGTTGTTTCAGGTTATGCATTGATGTAATCATAACAACAATCACTGAACTGAAATAGTTGATTCACAAGAATCCAGTGGGAATAACCTTTTGCTGGAATTTGTCTAAATTGAAAGCAATACATTTGATGCCAAACATGTTCTCTCTAAAGTGGATAAATAATTCTTACTTGAATCTTTTCGAGTAAGCAGTGTGATGCAGAATTGAATTGGCATCTTAAGTTATGGCACAGGTTTTGATCAAAGAATTAAAAGTTATGGTACAGGTTATTCTGTTTGTTTCAATGCTATCATATGAACCATACATCCATTTTTAGGTTCAAATGGGATCTTTGTGTATCTTCTATGGTATTGTTGCCAAGGACATTATTCCACTCTGGCATATCATTTCTACTTATGCCTTTTACCAGTTGATGTTTTGTGAATATTGTGAAGTCCCAGCATCTTTTTATATATATCTGTTTGCAAGTCTGTACATGTTATGCTAATTTTCTGTCTGACTTTTTTCGTATGGAATTATTTTGTTGAATGATATTCAAGTCAGTCAAGATTTCAGTTTATTTTCCTGTTGAGCTGTACAATTTGATGATATTGCAGTTCAACTTGTTTCTCTTGCTAAAAGAAGAGTTATCTTGAAACTTGAAAGTCAGACATCGTTGTTTGTTTTGGAGTAAAGTTATTAAATATCATTCGTAGGACATTGTGGATTTTTGGAAAATATTTTTGCTGCGCATTTCTACTCCTGAGCTCATATGGTTATTTGGTTGTTTTTGCTCAAGAATTTTCATTGGCTTTTTCTTGGTTATGTTAGATCTTGTATGGGTTCATACAAGTACTCTGGATTGTGATGTTATAGTGAAGTTTACACCTTTTTTGAAATAAAAAAAATGCAGCACTTCTGGTTGCCCTTTTGGTGAGGGTTGTCATTTTGCACACTATGTTCCTGGCGGATTCAAAGCAATTTCTCAGATGATCAGTCCTGCTATTCCCCCTGGCGCTAGAAATCCAGTCGGCCCCCCATCCTTTCCAGATGGTGTTTCGTCTCCAGCTGTCAAGACACGGTTGTGCAATAAATTCAACTCAGCTGAAGGCTGCAGGTTCGGTGACAAATGTCATTTTGCTCATGGTGAGTGGGAACTTGGAAGGCCAAACCCTCCACAAGAACACGGTGGAATGGGACCACCAATACAACAACCCAGAATGGGTGGTGGCTGGAATGTGCCTCCACCACCACCTAACCATGGACCTGCTGCTAGCTTCGGGGCCTCTGCAACCGCAAAGATTAGTGTCGATGCATCACTTGCAGGGCCCATAATTGGGAAAAATGGGGTCAACTCAAAGAATATATGTCGTATGACAGGAGCAAGGCTTTCTATAAAAGAACACGAGTCAGACTCTAACCTGAAGAACATTGAGTTGGAGGGCACCTTTGATCAGATCAATCTAGCTAGTTCGATGGTGCGTGAGTTGATTGCAAATGTTGGTGCTGCCTCTGCCAATAATGCCATGAATCAGCATCATCCTGCTCTGCAGCAATCATCTGGCTCCGCAAACAACTTTAAGACCAAGCTTTGTGCCAACTTTGCAAAAGGTACTTGTACGTTTAGAGAAAGATGCCATTTTGCCCACGGTGAAAGTGAATTGCGCAAACCAGGTATGTGAATGACCTCTTTGCAGCAACCTTGTAGCAGCGGATCTCTTCTTGAACAAAATGTTCTTTCGTTTTGCTTCTCCGTTTGAATCATTTGTTGATTTCGAAAAAGATATCCGATTACTTGTAAGACAAACATTTTTCATCTAAAGAATCGGGACGAGATTTTGAAGGCTCTTAACTTTAATGGAACCAGCTTGTGCTATTCTCTGCAACTTTCTTTCTCTCTTGCTTACAAACGAAATTCTTATGTTCATTATTTTCTCGGTTCAGGTTTTATTTTGAATTGTTTTTGTTCTTTCCACTGTTATTTGAGTGAAGTTCAGTAATTCCGTGAACAATGCTTTAATCTCCTACTGACATGGCAACA

mRNA sequence

CTTATCAAACCCTATTTTGACCTAATTTTCAAATCCGCCCCTCTCTCTTCTTTCCATATCCAGCTCCTCCTCCTCCTTATTAGGGTTTCCACATTCACTTCTCCCGCTGCTTCATTCCCAATTTTTCTCTTCTCTAACGCTTCCTCTTCTTCCCTTGAGTATTGGGTCGTCTTCGCTTCTCTCTTCAATGGACCCTGACGGCGTTCGCAAGAGGGAAAGAACTGAAACCGCCTTGAATGGCAATGGCGCCTTTAAGAAGTCCAAACCAGAAATGGACTCCTTATCTACTGGTTTAGGAAGCAAATCGAGGCCTTGCACAAAGTTTTTCAGCACTTCTGGTTGCCCTTTTGGTGAGGGTTGTCATTTTGCACACTATGTTCCTGGCGGATTCAAAGCAATTTCTCAGATGATCAGTCCTGCTATTCCCCCTGGCGCTAGAAATCCAGTCGGCCCCCCATCCTTTCCAGATGGTGTTTCGTCTCCAGCTGTCAAGACACGGTTGTGCAATAAATTCAACTCAGCTGAAGGCTGCAGGTTCGGTGACAAATGTCATTTTGCTCATGGTGAGTGGGAACTTGGAAGGCCAAACCCTCCACAAGAACACGGTGGAATGGGACCACCAATACAACAACCCAGAATGGGTGGTGGCTGGAATGTGCCTCCACCACCACCTAACCATGGACCTGCTGCTAGCTTCGGGGCCTCTGCAACCGCAAAGATTAGTGTCGATGCATCACTTGCAGGGCCCATAATTGGGAAAAATGGGGTCAACTCAAAGAATATATGTCGTATGACAGGAGCAAGGCTTTCTATAAAAGAACACGAGTCAGACTCTAACCTGAAGAACATTGAGTTGGAGGGCACCTTTGATCAGATCAATCTAGCTAGTTCGATGGTGCGTGAGTTGATTGCAAATGTTGGTGCTGCCTCTGCCAATAATGCCATGAATCAGCATCATCCTGCTCTGCAGCAATCATCTGGCTCCGCAAACAACTTTAAGACCAAGCTTTGTGCCAACTTTGCAAAAGGTACTTGTACGTTTAGAGAAAGATGCCATTTTGCCCACGGTGAAAGTGAATTGCGCAAACCAGGTATGTGAATGACCTCTTTGCAGCAACCTTGTAGCAGCGGATCTCTTCTTGAACAAAATGTTCTTTCGTTTTGCTTCTCCGTTTGAATCATTTGTTGATTTCGAAAAAGATATCCGATTACTTGTAAGACAAACATTTTTCATCTAAAGAATCGGGACGAGATTTTGAAGGCTCTTAACTTTAATGGAACCAGCTTGTGCTATTCTCTGCAACTTTCTTTCTCTCTTGCTTACAAACGAAATTCTTATGTTCATTATTTTCTCGGTTCAGGTTTTATTTTGAATTGTTTTTGTTCTTTCCACTGTTATTTGAGTGAAGTTCAGTAATTCCGTGAACAATGCTTTAATCTCCTACTGACATGGCAACA

Coding sequence (CDS)

ATGGACCCTGACGGCGTTCGCAAGAGGGAAAGAACTGAAACCGCCTTGAATGGCAATGGCGCCTTTAAGAAGTCCAAACCAGAAATGGACTCCTTATCTACTGGTTTAGGAAGCAAATCGAGGCCTTGCACAAAGTTTTTCAGCACTTCTGGTTGCCCTTTTGGTGAGGGTTGTCATTTTGCACACTATGTTCCTGGCGGATTCAAAGCAATTTCTCAGATGATCAGTCCTGCTATTCCCCCTGGCGCTAGAAATCCAGTCGGCCCCCCATCCTTTCCAGATGGTGTTTCGTCTCCAGCTGTCAAGACACGGTTGTGCAATAAATTCAACTCAGCTGAAGGCTGCAGGTTCGGTGACAAATGTCATTTTGCTCATGGTGAGTGGGAACTTGGAAGGCCAAACCCTCCACAAGAACACGGTGGAATGGGACCACCAATACAACAACCCAGAATGGGTGGTGGCTGGAATGTGCCTCCACCACCACCTAACCATGGACCTGCTGCTAGCTTCGGGGCCTCTGCAACCGCAAAGATTAGTGTCGATGCATCACTTGCAGGGCCCATAATTGGGAAAAATGGGGTCAACTCAAAGAATATATGTCGTATGACAGGAGCAAGGCTTTCTATAAAAGAACACGAGTCAGACTCTAACCTGAAGAACATTGAGTTGGAGGGCACCTTTGATCAGATCAATCTAGCTAGTTCGATGGTGCGTGAGTTGATTGCAAATGTTGGTGCTGCCTCTGCCAATAATGCCATGAATCAGCATCATCCTGCTCTGCAGCAATCATCTGGCTCCGCAAACAACTTTAAGACCAAGCTTTGTGCCAACTTTGCAAAAGGTACTTGTACGTTTAGAGAAAGATGCCATTTTGCCCACGGTGAAAGTGAATTGCGCAAACCAGGTATGTGA

Protein sequence

MDPDGVRKRERTETALNGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHFAHYVPGGFKAISQMISPAIPPGARNPVGPPSFPDGVSSPAVKTRLCNKFNSAEGCRFGDKCHFAHGEWELGRPNPPQEHGGMGPPIQQPRMGGGWNVPPPPPNHGPAASFGASATAKISVDASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDSNLKNIELEGTFDQINLASSMVRELIANVGAASANNAMNQHHPALQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRKPGM

Homology

[Close]

BLAST of Lcy03g009820 vs. ExPASy Swiss-Prot
Match: Q7F8R0 (Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0194200 PE=2 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 4.6e-86
Identity = 177/301 (58.80%), Postives = 216/301 (71.76%), Query Frame = 0


Query: 5   GVRKRERTETALNGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHFAHYV 64
           G RKR + + A   NGA  K   E +S  TG+GSKS+PCTKFFSTSGCPFGEGCHF H+ 
Sbjct: 4   GGRKRGKPDGA---NGAGGKRARESESFQTGVGSKSKPCTKFFSTSGCPFGEGCHFLHHF 63

Query: 65  PGGFKAISQMIS---PAI-PPGARNPVGPPSFPDGVSSPAVKTRLCNKFNSAEGCRFGDK 124
           PGG++A+++M +   PAI PP  R P+G  + PDG  +P VKTRLCNK+N+AEGC++GDK
Sbjct: 64  PGGYQAVAKMTNLGGPAIAPPPGRMPMG-NAVPDGPPTPTVKTRLCNKYNTAEGCKWGDK 123

Query: 125 CHFAHGEWELGRPNPPQEHGGMGPPIQQPRMGGGWNVPP-PPPNHGPAASFGASATAKIS 184
           CHFAHGE ELG+   P       PP   PR  G +  PP P P     ASFGASATAKIS
Sbjct: 124 CHFAHGERELGK---PMLMDSSMPPPMGPRPTGHFAPPPMPSPAMSTPASFGASATAKIS 183

Query: 185 VDASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDSNLKNIELEGTFDQINLASSMVRE 244
           VDASLAG IIG+ GVN+K I R+TGA+L+I++HESD+NLKNIELEGTFDQI  AS+MVRE
Sbjct: 184 VDASLAGGIIGRGGVNTKQISRVTGAKLAIRDHESDTNLKNIELEGTFDQIKNASAMVRE 243

Query: 245 LIANVGAASANNAMNQHHPALQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELR 301
           LI ++G  +      +      +  G  +NFKTKLC NF KG+CTF +RCHFAHGE+ELR
Sbjct: 244 LIVSIGGGAPPQG-KKPVGGSHRGGGPGSNFKTKLCENFTKGSCTFGDRCHFAHGENELR 296

[Close]

BLAST of Lcy03g009820 vs. ExPASy Swiss-Prot
Match: Q7XPK1 (Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0665700 PE=2 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 5.1e-85
Identity = 174/305 (57.05%), Postives = 211/305 (69.18%), Query Frame = 0


Query: 7   RKRERTETALNGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHFAHYVPG 66
           RKR R +TA NG  A  K   E +S  TGL SK +PCTKFFST GCPFGEGCHF+H+VPG
Sbjct: 8   RKRSRPDTA-NGGAAGGKRSRETESFQTGLSSKLKPCTKFFSTIGCPFGEGCHFSHFVPG 67

Query: 67  GFKAISQMI---SPAIPPGARNPVGPPSFPDGVSSPAVKTRLCNKFNSAEGCRFGDKCHF 126
           G++A+++ +   +PA+P  AR P+   +  +   + + KTR+C K+N+AEGC+FGDKCHF
Sbjct: 68  GYQAVAKTLNLGNPAVPAPARAPMDHAAGGNSHPASSGKTRMCTKYNTAEGCKFGDKCHF 127

Query: 127 AHGEWELGRPNPPQEHGGMGPPIQQPRMGGGWNVPPPPPNHGPAASFGASATAKISVDAS 186
           AHGE ELG+P        M PP+   R GG    PPP     PA +FGASATAKISVDAS
Sbjct: 128 AHGERELGKPAYMSHESAMAPPM-GGRYGGRPEPPPPAAMGPPAGNFGASATAKISVDAS 187

Query: 187 LAGPIIGKNGVNSKNICRMTGARLSIKEHESDSNLKNIELEGTFDQINLASSMVRELIAN 246
           LAG IIGK GVN+K ICR+TG +LSI++HESDSNLKNIELEG FDQI  AS+MV ELIA 
Sbjct: 188 LAGGIIGKGGVNTKQICRVTGVKLSIRDHESDSNLKNIELEGNFDQIKQASNMVGELIAT 247

Query: 247 VG--------AASANNAMNQHHPALQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGE 301
           +         A SA  A     PA +   G  +N+KTKLC NF KGTCTF +RCHFAHGE
Sbjct: 248 ISPSTPAKKPAGSAAGAA----PAGRGGPGGRSNYKTKLCENFVKGTCTFGDRCHFAHGE 306

[Close]

BLAST of Lcy03g009820 vs. ExPASy Swiss-Prot
Match: Q69XQ3 (Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0618100 PE=2 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.8e-77
Identity = 164/294 (55.78%), Postives = 206/294 (70.07%), Query Frame = 0


Query: 19  NGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHFAHYVPGGFKAISQMIS-- 78
           NGA K+++   +S   G+GSK +PCTKFFSTSGCPFG  CHF H  PGG++A ++M S  
Sbjct: 15  NGAAKRARAS-ESSQVGVGSKLKPCTKFFSTSGCPFGSSCHFLHNFPGGYQAAAKMTSHG 74

Query: 79  ---PAIPPGARNPVGPPSFPDGVSSPAVKTRLCNKFNSAEGCRFGDKCHFAHGEWELGRP 138
               A PPG R P+GP + P+G  + +VKTR+CNK+N+AEGC++G KCHFAHGE ELG+P
Sbjct: 75  GTAVAAPPG-RMPLGPGA-PNGPPTSSVKTRMCNKYNTAEGCKWGSKCHFAHGERELGKP 134

Query: 139 -----NPPQEHGGMGPPIQQPRMGGGWNVPPPPPNHGPAASFGASATAKISVDASLAGPI 198
                + P   G M  P + P        P P P+  P ++FGASATAKISVDASLAG I
Sbjct: 135 MLLDNSMPHPMGSM--PFEAP--------PMPGPDIVPPSTFGASATAKISVDASLAGGI 194

Query: 199 IGKNGVNSKNICRMTGARLSIKEHESDSNLKNIELEGTFDQINLASSMVRELIANVGAAS 258
           IGK G N+K+I RMTGA+L+I+++ES+ NLKNIELEGTFDQI  AS+MV ELI  +    
Sbjct: 195 IGKGGTNTKHISRMTGAKLAIRDNESNPNLKNIELEGTFDQIKHASAMVTELIVRI---- 254

Query: 259 ANNAMNQHHPAL-QQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRKP 302
           + NA    +P     + G  +NFKTKLC NF KG+CTF +RCHFAHGESELRKP
Sbjct: 255 SGNAPPAKNPGRGSHAGGPGSNFKTKLCENFNKGSCTFGDRCHFAHGESELRKP 291

[Close]

BLAST of Lcy03g009820 vs. ExPASy Swiss-Prot
Match: Q9FG30 (Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=At5g06770 PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 4.4e-60
Identity = 144/301 (47.84%), Postives = 175/301 (58.14%), Query Frame = 0


Query: 7   RKRERTETAL--NGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHFAHYV 66
           RKR R E A   N NG FK+SK EM+S+STGLGSKS+PCTKFFSTSGCPFG+ CHF HYV
Sbjct: 4   RKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFLHYV 63

Query: 67  PGGFKAISQM--ISPAIPPGARNPVGPPSFPDGVSSPAVKTRLCNKFNSAEGCRFGDKCH 126
           PGG+ A +QM  + P +   +RN  G                     +   G RF     
Sbjct: 64  PGGYNAAAQMTNLRPPVSQVSRNMQG---------------------SGGPGGRF----- 123

Query: 127 FAHGEWELGRPNPPQEHGGMGPPIQQPRMGGGWNVPPPPPNHGPAASFGASATAKISVDA 186
                             G G                  P  GP + FGAS T+KISVDA
Sbjct: 124 -----------------SGRG-----------------DPGSGPVSIFGAS-TSKISVDA 183

Query: 187 SLAGPIIGKNGVNSKNICRMTGARLSIKEHESDSNLKNIELEGTFDQINLASSMVRELIA 246
           SLAG IIGK G++SK ICR TGA+LSIK+HE D NLK IELEGTF+QIN+AS MVRELI 
Sbjct: 184 SLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVRELIG 239

Query: 247 NVGAASANNAMNQHHPALQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRKPG 304
            +G+      +    P  +   GS  N+KTK+C  ++KG CT+ +RCHFAHGESELR+ G
Sbjct: 244 RLGSVKKPQGIG--GPEGKPHPGS--NYKTKICDRYSKGNCTYGDRCHFAHGESELRRSG 239

[Close]

BLAST of Lcy03g009820 vs. ExPASy Swiss-Prot
Match: Q9C7C3 (Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=At3g12130 PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.4e-58
Identity = 143/313 (45.69%), Postives = 175/313 (55.91%), Query Frame = 0


Query: 7   RKRERTET-ALNGN-GAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHFAHYV 66
           RKR R E  + N N G +KKSK EM+S STGLGSKS+PCTKFFSTSGCPFGE CHF HYV
Sbjct: 4   RKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFLHYV 63

Query: 67  PGGFKAISQM--ISPAIPPGARNPVGPPSFPDGVSSPAVKTRLCNKFNSAEGCRFGDKCH 126
           PGG+ A+SQM  + P IP  +RN  G                      S  G RF  +  
Sbjct: 64  PGGYNAVSQMTNMGPPIPQVSRNMQG----------------------SGNGGRFSGR-- 123

Query: 127 FAHGEWELGRPNPPQEHGGMGPPIQQPRMGGGWNVPPPPPNHGPAASFGASATAKISVDA 186
                            G  GP                    G  ++FG SATA+ SVDA
Sbjct: 124 -----------------GESGP--------------------GHVSNFGDSATARFSVDA 183

Query: 187 SLAGPIIGKNGVNSKNICRMTGARLSIKEHESDSNLKNIELEGTFDQINLASSMVRELIA 246
           SLAG IIGK GV+SK ICR TG +LSI++HE D NLKNI LEGT +QI+ AS+MV++LI 
Sbjct: 184 SLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDLIG 243

Query: 247 NVGAASAN------------NAMNQHHPALQQSSGSANNFKTKLCANFAKGTCTFRERCH 304
            + +A+               +  + HP         +NFKTK+C  F+KG CTF +RCH
Sbjct: 244 RLNSAAKKPPGGGLGGGGGMGSEGKPHP--------GSNFKTKICERFSKGNCTFGDRCH 247

[Close]

BLAST of Lcy03g009820 vs. ExPASy TrEMBL
Match: A0A6J1JLI2 (zinc finger CCCH domain-containing protein 14-like OS=Cucurbita maxima OX=3661 GN=LOC111485495 PE=4 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 3.0e-160
Identity = 283/303 (93.40%), Postives = 289/303 (95.38%), Query Frame = 0


Query: 1   MDPDGVRKRERTETALNGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60
           MD D VRKRERTETALNGNG+FKK KPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF
Sbjct: 1   MDIDAVRKRERTETALNGNGSFKKFKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHYVPGGFKAISQMISPAIPPGARNPVGPPSFPDGVSSPAVKTRLCNKFNSAEGCRFGDK 120
           AHYVPGGFKAISQMI+PA+PPG RNPV P SF DGVS PAVKTRLCNKFNSAEGCRFGDK
Sbjct: 61  AHYVPGGFKAISQMITPALPPGNRNPVPPQSFQDGVSPPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CHFAHGEWELGRPNPPQEHGGMGPPIQQPRMGGGWNVPPPPPNHGPAASFGASATAKISV 180
           CHFAHGEWELGRPNPPQ+HGGMG  +QQPRMGGGWNVPPPPPNHGPAASFGASATAKISV
Sbjct: 121 CHFAHGEWELGRPNPPQDHGGMG-QMQQPRMGGGWNVPPPPPNHGPAASFGASATAKISV 180

Query: 181 DASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDSNLKNIELEGTFDQINLASSMVREL 240
           DASLAGPIIGKNGVNSKNICRMTGARLSIKEHESD +LKNIELEGTFDQINLASSMVREL
Sbjct: 181 DASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDPSLKNIELEGTFDQINLASSMVREL 240

Query: 241 IANVGAASANNAMNQHHPALQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRK 300
           IANVGAASANNAM QHH A QQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRK
Sbjct: 241 IANVGAASANNAMKQHHSATQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRK 300

Query: 301 PGM 304
           PGM
Sbjct: 301 PGM 302

[Close]

BLAST of Lcy03g009820 vs. ExPASy TrEMBL
Match: A0A6J1HDK7 (zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662 GN=LOC111461825 PE=4 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 4.3e-159
Identity = 283/303 (93.40%), Postives = 289/303 (95.38%), Query Frame = 0


Query: 1   MDPDGVRKRERTETALNGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60
           MD D VRKRERTETALNGNG+FKK KPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF
Sbjct: 1   MDIDAVRKRERTETALNGNGSFKKFKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHYVPGGFKAISQMISPAIPPGARNPVGPPSFPDGVSSPAVKTRLCNKFNSAEGCRFGDK 120
           AHYVPGGFKAISQMI+PA+PPG RNPV P SF DGVS PAVKTRLCNKFNSAEGCRFGDK
Sbjct: 61  AHYVPGGFKAISQMITPALPPGNRNPV-PQSFQDGVSPPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CHFAHGEWELGRPNPPQEHGGMGPPIQQPRMGGGWNVPPPPPNHGPAASFGASATAKISV 180
           CHFAHGEWELGRPNPPQ+HGGMG  +QQPRMGGGWNVPPPPPNHGPAASFGASATAKISV
Sbjct: 121 CHFAHGEWELGRPNPPQDHGGMG-QMQQPRMGGGWNVPPPPPNHGPAASFGASATAKISV 180

Query: 181 DASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDSNLKNIELEGTFDQINLASSMVREL 240
           DASLAGPIIGKNGVNSKNICRMTGARLSIKEHESD +LKNIELEGTFDQINLASSMVREL
Sbjct: 181 DASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDPSLKNIELEGTFDQINLASSMVREL 240

Query: 241 IANVGAASANNAMNQHHPALQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRK 300
           IANVGAASANNAM QHH A QQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRK
Sbjct: 241 IANVGAASANNAMKQHHSATQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRK 300

Query: 301 PGM 304
           PGM
Sbjct: 301 PGM 301

[Close]

BLAST of Lcy03g009820 vs. ExPASy TrEMBL
Match: A0A5A7TFZ9 (Zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00430 PE=4 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 1.2e-156
Identity = 278/308 (90.26%), Postives = 287/308 (93.18%), Query Frame = 0


Query: 1   MDPDGVRKRERTETALNGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60
           MD DG RKRERTETALNGNG FKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF
Sbjct: 1   MDLDGARKRERTETALNGNGGFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHYVPGGFKAISQMISPAIPPGARNPVGPPSFPDGVSSPAVKTRLCNKFNSAEGCRFGDK 120
           AHYVPGG K+ISQMISPA+PPG RNP  P SFPDGV  PAVKTRLCNKFNSAEGCRFGDK
Sbjct: 61  AHYVPGGVKSISQMISPALPPGIRNPAPPQSFPDGV-PPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CHFAHGEWELGRPNPPQEHGGMGP-PIQQPRMGGGWNVPPPPPNHGPAASFGASATAKIS 180
           C++AHGEWELGRPNPPQ+HGGMGP P+QQPRMGGGWN PPPPPNHGPAASFGASATAKIS
Sbjct: 121 CYYAHGEWELGRPNPPQDHGGMGPGPMQQPRMGGGWNAPPPPPNHGPAASFGASATAKIS 180

Query: 181 VDASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDSNLKNIELEGTFDQINLASSMVRE 240
           VDASLAGPIIGKNG+NSKNICRMTGARLSIKEHESD NLKNIELEGTFDQINLASSMVRE
Sbjct: 181 VDASLAGPIIGKNGINSKNICRMTGARLSIKEHESDPNLKNIELEGTFDQINLASSMVRE 240

Query: 241 LIANVGAASANNAM----NQHHPALQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGE 300
           LIANVGAASANNAM    +QHH  +QQSSGSANNFKTKLCANF KG CTFRERCHFAHGE
Sbjct: 241 LIANVGAASANNAMKQHQHQHHSGMQQSSGSANNFKTKLCANFTKGACTFRERCHFAHGE 300

Query: 301 SELRKPGM 304
           SELRKPGM
Sbjct: 301 SELRKPGM 307

[Close]

BLAST of Lcy03g009820 vs. ExPASy TrEMBL
Match: A0A0A0M2L9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G605650 PE=4 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 1.2e-156
Identity = 279/309 (90.29%), Postives = 287/309 (92.88%), Query Frame = 0


Query: 1   MDPDGVRKRERTETALNGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60
           MD DG RKRERTETALNGNG FKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF
Sbjct: 1   MDLDGARKRERTETALNGNGGFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHYVPGGFKAISQMISPAIPPGARNPVGPPSFPDGVSSPAVKTRLCNKFNSAEGCRFGDK 120
           AHYVPGG K+ISQMISPA+PPG RNP  P SFPDGV  PAVKTRLCNKFNSAEGCRFGDK
Sbjct: 61  AHYVPGGVKSISQMISPALPPGIRNPAPPQSFPDGV-PPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CHFAHGEWELGRPNPPQEHGGMGP-PIQQPRMGGGWNVPPPPPNHGPAASFGASATAKIS 180
           C++AHGEWELGRPNPPQ+HGGMGP P+QQPRMGGGWN PPPPPNHGPAASFGASATAKIS
Sbjct: 121 CYYAHGEWELGRPNPPQDHGGMGPGPMQQPRMGGGWNAPPPPPNHGPAASFGASATAKIS 180

Query: 181 VDASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDSNLKNIELEGTFDQINLASSMVRE 240
           VDASLAGPIIGKNGVNSKNICRMTGARLSIKEHESD NLKNIELEGTFDQINLASSMVRE
Sbjct: 181 VDASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDPNLKNIELEGTFDQINLASSMVRE 240

Query: 241 LIANVGAASANNAM-----NQHHPALQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHG 300
           LIANVGAASANNAM     +QHH  +QQSSGSANNFKTKLCANF KG CTFRERCHFAHG
Sbjct: 241 LIANVGAASANNAMKQHQQHQHHSGMQQSSGSANNFKTKLCANFTKGACTFRERCHFAHG 300

Query: 301 ESELRKPGM 304
           ESELRKPGM
Sbjct: 301 ESELRKPGM 308

[Close]

BLAST of Lcy03g009820 vs. ExPASy TrEMBL
Match: A0A5D3CR11 (Zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1121G00090 PE=4 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 2.0e-156
Identity = 278/310 (89.68%), Postives = 287/310 (92.58%), Query Frame = 0


Query: 1   MDPDGVRKRERTETALNGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60
           MD DG RKRERTETALNGNG FKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF
Sbjct: 1   MDLDGARKRERTETALNGNGGFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHYVPGGFKAISQMISPAIPPGARNPVGPPSFPDGVSSPAVKTRLCNKFNSAEGCRFGDK 120
           AHYVPGG K+ISQMISPA+PPG RNP  P SFPDGV  PAVKTRLCNKFNSAEGCRFGDK
Sbjct: 61  AHYVPGGVKSISQMISPALPPGIRNPAPPQSFPDGV-PPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CHFAHGEWELGRPNPPQEHGGMGP-PIQQPRMGGGWNVPPPPPNHGPAASFGASATAKIS 180
           C++AHGEWELGRPNPPQ+HGGMGP P+QQPRMGGGWN PPPPPNHGPAASFGASATAKIS
Sbjct: 121 CYYAHGEWELGRPNPPQDHGGMGPGPMQQPRMGGGWNAPPPPPNHGPAASFGASATAKIS 180

Query: 181 VDASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDSNLKNIELEGTFDQINLASSMVRE 240
           VDASLAGPIIGKNG+NSKNICRMTGARLSIKEHESD NLKNIELEGTFDQINLASSMVRE
Sbjct: 181 VDASLAGPIIGKNGINSKNICRMTGARLSIKEHESDPNLKNIELEGTFDQINLASSMVRE 240

Query: 241 LIANVGAASANNAM------NQHHPALQQSSGSANNFKTKLCANFAKGTCTFRERCHFAH 300
           LIANVGAASANNAM      +QHH  +QQSSGSANNFKTKLCANF KG CTFRERCHFAH
Sbjct: 241 LIANVGAASANNAMKQHQHQHQHHSGMQQSSGSANNFKTKLCANFTKGACTFRERCHFAH 300

Query: 301 GESELRKPGM 304
           GESELRKPGM
Sbjct: 301 GESELRKPGM 309

[Close]

BLAST of Lcy03g009820 vs. NCBI nr
Match: KAG6590234.1 (Non-structural maintenance of chromosomes element 4-like A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 574.3 bits (1479), Expect = 6.1e-160
Identity = 283/303 (93.40%), Postives = 289/303 (95.38%), Query Frame = 0


Query: 1   MDPDGVRKRERTETALNGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60
           MD D VRKRERTETALNGNG+FKK KPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF
Sbjct: 430 MDIDAVRKRERTETALNGNGSFKKFKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 489

Query: 61  AHYVPGGFKAISQMISPAIPPGARNPVGPPSFPDGVSSPAVKTRLCNKFNSAEGCRFGDK 120
           AHYVPGGFKAISQMI+PA+PPG RNPV P SF DGVS PAVKTRLCNKFNSAEGCRFGDK
Sbjct: 490 AHYVPGGFKAISQMITPALPPGNRNPVPPQSFQDGVSPPAVKTRLCNKFNSAEGCRFGDK 549

Query: 121 CHFAHGEWELGRPNPPQEHGGMGPPIQQPRMGGGWNVPPPPPNHGPAASFGASATAKISV 180
           CHFAHGEWELGRPNPPQ+HGGMG  +QQPRMGGGWNVPPPPPNHGPAASFGASATAKISV
Sbjct: 550 CHFAHGEWELGRPNPPQDHGGMG-QMQQPRMGGGWNVPPPPPNHGPAASFGASATAKISV 609

Query: 181 DASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDSNLKNIELEGTFDQINLASSMVREL 240
           DASLAGPIIGKNGVNSKNICRMTGARLSIKEHESD +LKNIELEGTFDQINLASSMVREL
Sbjct: 610 DASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDPSLKNIELEGTFDQINLASSMVREL 669

Query: 241 IANVGAASANNAMNQHHPALQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRK 300
           IANVGAASANNAM QHH A QQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRK
Sbjct: 670 IANVGAASANNAMKQHHSATQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRK 729

Query: 301 PGM 304
           PGM
Sbjct: 730 PGM 731

[Close]

BLAST of Lcy03g009820 vs. NCBI nr
Match: XP_022988178.1 (zinc finger CCCH domain-containing protein 14-like [Cucurbita maxima])

HSP 1 Score: 574.3 bits (1479), Expect = 6.1e-160
Identity = 283/303 (93.40%), Postives = 289/303 (95.38%), Query Frame = 0


Query: 1   MDPDGVRKRERTETALNGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60
           MD D VRKRERTETALNGNG+FKK KPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF
Sbjct: 1   MDIDAVRKRERTETALNGNGSFKKFKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHYVPGGFKAISQMISPAIPPGARNPVGPPSFPDGVSSPAVKTRLCNKFNSAEGCRFGDK 120
           AHYVPGGFKAISQMI+PA+PPG RNPV P SF DGVS PAVKTRLCNKFNSAEGCRFGDK
Sbjct: 61  AHYVPGGFKAISQMITPALPPGNRNPVPPQSFQDGVSPPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CHFAHGEWELGRPNPPQEHGGMGPPIQQPRMGGGWNVPPPPPNHGPAASFGASATAKISV 180
           CHFAHGEWELGRPNPPQ+HGGMG  +QQPRMGGGWNVPPPPPNHGPAASFGASATAKISV
Sbjct: 121 CHFAHGEWELGRPNPPQDHGGMG-QMQQPRMGGGWNVPPPPPNHGPAASFGASATAKISV 180

Query: 181 DASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDSNLKNIELEGTFDQINLASSMVREL 240
           DASLAGPIIGKNGVNSKNICRMTGARLSIKEHESD +LKNIELEGTFDQINLASSMVREL
Sbjct: 181 DASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDPSLKNIELEGTFDQINLASSMVREL 240

Query: 241 IANVGAASANNAMNQHHPALQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRK 300
           IANVGAASANNAM QHH A QQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRK
Sbjct: 241 IANVGAASANNAMKQHHSATQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRK 300

Query: 301 PGM 304
           PGM
Sbjct: 301 PGM 302

[Close]

BLAST of Lcy03g009820 vs. NCBI nr
Match: XP_022961279.1 (zinc finger CCCH domain-containing protein 14-like [Cucurbita moschata])

HSP 1 Score: 570.5 bits (1469), Expect = 8.8e-159
Identity = 283/303 (93.40%), Postives = 289/303 (95.38%), Query Frame = 0


Query: 1   MDPDGVRKRERTETALNGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60
           MD D VRKRERTETALNGNG+FKK KPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF
Sbjct: 1   MDIDAVRKRERTETALNGNGSFKKFKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHYVPGGFKAISQMISPAIPPGARNPVGPPSFPDGVSSPAVKTRLCNKFNSAEGCRFGDK 120
           AHYVPGGFKAISQMI+PA+PPG RNPV P SF DGVS PAVKTRLCNKFNSAEGCRFGDK
Sbjct: 61  AHYVPGGFKAISQMITPALPPGNRNPV-PQSFQDGVSPPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CHFAHGEWELGRPNPPQEHGGMGPPIQQPRMGGGWNVPPPPPNHGPAASFGASATAKISV 180
           CHFAHGEWELGRPNPPQ+HGGMG  +QQPRMGGGWNVPPPPPNHGPAASFGASATAKISV
Sbjct: 121 CHFAHGEWELGRPNPPQDHGGMG-QMQQPRMGGGWNVPPPPPNHGPAASFGASATAKISV 180

Query: 181 DASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDSNLKNIELEGTFDQINLASSMVREL 240
           DASLAGPIIGKNGVNSKNICRMTGARLSIKEHESD +LKNIELEGTFDQINLASSMVREL
Sbjct: 181 DASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDPSLKNIELEGTFDQINLASSMVREL 240

Query: 241 IANVGAASANNAMNQHHPALQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRK 300
           IANVGAASANNAM QHH A QQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRK
Sbjct: 241 IANVGAASANNAMKQHHSATQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRK 300

Query: 301 PGM 304
           PGM
Sbjct: 301 PGM 301

[Close]

BLAST of Lcy03g009820 vs. NCBI nr
Match: KAG7023875.1 (Zinc finger CCCH domain-containing protein 14, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 569.7 bits (1467), Expect = 1.5e-158
Identity = 281/301 (93.36%), Postives = 287/301 (95.35%), Query Frame = 0


Query: 1   MDPDGVRKRERTETALNGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60
           MD D VRKRERTETALNGNG+FKK KPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF
Sbjct: 1   MDIDAVRKRERTETALNGNGSFKKFKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHYVPGGFKAISQMISPAIPPGARNPVGPPSFPDGVSSPAVKTRLCNKFNSAEGCRFGDK 120
           AHYVPGGFKAISQMI+PA+PPG RNPV P SF DGVS PAVKTRLCNKFNSAEGCRFGDK
Sbjct: 61  AHYVPGGFKAISQMITPALPPGNRNPVPPQSFQDGVSPPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CHFAHGEWELGRPNPPQEHGGMGPPIQQPRMGGGWNVPPPPPNHGPAASFGASATAKISV 180
           CHFAHGEWELGRPNPPQ+HGGMG  +QQPRMGGGWNVPPPPPNHGPAASFGASATAKISV
Sbjct: 121 CHFAHGEWELGRPNPPQDHGGMG-QMQQPRMGGGWNVPPPPPNHGPAASFGASATAKISV 180

Query: 181 DASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDSNLKNIELEGTFDQINLASSMVREL 240
           DASLAGPIIGKNGVNSKNICRMTGARLSIKEHESD +LKNIELEGTFDQINLASSMVREL
Sbjct: 181 DASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDPSLKNIELEGTFDQINLASSMVREL 240

Query: 241 IANVGAASANNAMNQHHPALQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRK 300
           IANVGAASANNAM QHH A QQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRK
Sbjct: 241 IANVGAASANNAMKQHHSATQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRK 300

Query: 301 P 302
           P
Sbjct: 301 P 300

[Close]

BLAST of Lcy03g009820 vs. NCBI nr
Match: XP_023516879.1 (zinc finger CCCH domain-containing protein 14-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023516880.1 zinc finger CCCH domain-containing protein 14-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 565.8 bits (1457), Expect = 2.2e-157
Identity = 281/303 (92.74%), Postives = 287/303 (94.72%), Query Frame = 0


Query: 1   MDPDGVRKRERTETALNGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60
           MD D VRKRERTETA NGNG+FKK KPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF
Sbjct: 1   MDIDAVRKRERTETAFNGNGSFKKLKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHF 60

Query: 61  AHYVPGGFKAISQMISPAIPPGARNPVGPPSFPDGVSSPAVKTRLCNKFNSAEGCRFGDK 120
           AHYVPGGFKAISQMI+PA+PPG RNPV P SF DGVS PAVKTRLCNKFNSAEGCRFGDK
Sbjct: 61  AHYVPGGFKAISQMITPALPPGNRNPVPPQSFQDGVSPPAVKTRLCNKFNSAEGCRFGDK 120

Query: 121 CHFAHGEWELGRPNPPQEHGGMGPPIQQPRMGGGWNVPPPPPNHGPAASFGASATAKISV 180
           CHFAHGEWELGRPNPPQ+HGGMG  +QQPRMGGGWNV PPPPNHGPAASFGASATAKISV
Sbjct: 121 CHFAHGEWELGRPNPPQDHGGMG-QMQQPRMGGGWNV-PPPPNHGPAASFGASATAKISV 180

Query: 181 DASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDSNLKNIELEGTFDQINLASSMVREL 240
           DASLAGPIIGKNGVNSKNICRMTGARLSIKEHESD +LKNIELEGTFDQINLASSMVREL
Sbjct: 181 DASLAGPIIGKNGVNSKNICRMTGARLSIKEHESDPSLKNIELEGTFDQINLASSMVREL 240

Query: 241 IANVGAASANNAMNQHHPALQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRK 300
           IANVGAASANNAM QHH A QQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRK
Sbjct: 241 IANVGAASANNAMKQHHSATQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRK 300

Query: 301 PGM 304
           PGM
Sbjct: 301 PGM 301

[Close]

BLAST of Lcy03g009820 vs. TAIR 10
Match: AT5G06770.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 233.0 bits (593), Expect = 3.1e-61
Identity = 144/301 (47.84%), Postives = 175/301 (58.14%), Query Frame = 0


Query: 7   RKRERTETAL--NGNGAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHFAHYV 66
           RKR R E A   N NG FK+SK EM+S+STGLGSKS+PCTKFFSTSGCPFG+ CHF HYV
Sbjct: 4   RKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFLHYV 63

Query: 67  PGGFKAISQM--ISPAIPPGARNPVGPPSFPDGVSSPAVKTRLCNKFNSAEGCRFGDKCH 126
           PGG+ A +QM  + P +   +RN  G                     +   G RF     
Sbjct: 64  PGGYNAAAQMTNLRPPVSQVSRNMQG---------------------SGGPGGRF----- 123

Query: 127 FAHGEWELGRPNPPQEHGGMGPPIQQPRMGGGWNVPPPPPNHGPAASFGASATAKISVDA 186
                             G G                  P  GP + FGAS T+KISVDA
Sbjct: 124 -----------------SGRG-----------------DPGSGPVSIFGAS-TSKISVDA 183

Query: 187 SLAGPIIGKNGVNSKNICRMTGARLSIKEHESDSNLKNIELEGTFDQINLASSMVRELIA 246
           SLAG IIGK G++SK ICR TGA+LSIK+HE D NLK IELEGTF+QIN+AS MVRELI 
Sbjct: 184 SLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVRELIG 239

Query: 247 NVGAASANNAMNQHHPALQQSSGSANNFKTKLCANFAKGTCTFRERCHFAHGESELRKPG 304
            +G+      +    P  +   GS  N+KTK+C  ++KG CT+ +RCHFAHGESELR+ G
Sbjct: 244 RLGSVKKPQGIG--GPEGKPHPGS--NYKTKICDRYSKGNCTYGDRCHFAHGESELRRSG 239

[Close]

BLAST of Lcy03g009820 vs. TAIR 10
Match: AT3G12130.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 227.3 bits (578), Expect = 1.7e-59
Identity = 143/313 (45.69%), Postives = 175/313 (55.91%), Query Frame = 0


Query: 7   RKRERTET-ALNGN-GAFKKSKPEMDSLSTGLGSKSRPCTKFFSTSGCPFGEGCHFAHYV 66
           RKR R E  + N N G +KKSK EM+S STGLGSKS+PCTKFFSTSGCPFGE CHF HYV
Sbjct: 4   RKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFLHYV 63

Query: 67  PGGFKAISQM--ISPAIPPGARNPVGPPSFPDGVSSPAVKTRLCNKFNSAEGCRFGDKCH 126
           PGG+ A+SQM  + P IP  +RN  G                      S  G RF  +  
Sbjct: 64  PGGYNAVSQMTNMGPPIPQVSRNMQG----------------------SGNGGRFSGR-- 123

Query: 127 FAHGEWELGRPNPPQEHGGMGPPIQQPRMGGGWNVPPPPPNHGPAASFGASATAKISVDA 186
                            G  GP                    G  ++FG SATA+ SVDA
Sbjct: 124 -----------------GESGP--------------------GHVSNFGDSATARFSVDA 183

Query: 187 SLAGPIIGKNGVNSKNICRMTGARLSIKEHESDSNLKNIELEGTFDQINLASSMVRELIA 246
           SLAG IIGK GV+SK ICR TG +LSI++HE D NLKNI LEGT +QI+ AS+MV++LI 
Sbjct: 184 SLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDLIG 243

Query: 247 NVGAASAN------------NAMNQHHPALQQSSGSANNFKTKLCANFAKGTCTFRERCH 304
            + +A+               +  + HP         +NFKTK+C  F+KG CTF +RCH
Sbjct: 244 RLNSAAKKPPGGGLGGGGGMGSEGKPHP--------GSNFKTKICERFSKGNCTFGDRCH 247

[Close]

BLAST of Lcy03g009820 vs. TAIR 10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 60.1 bits (144), Expect = 3.6e-09
Identity = 47/135 (34.81%), Postives = 62/135 (45.93%), Query Frame = 0


Query: 15  ALNGNGAFKKSKPEMDSLSTGLGS---KSRPCTKFFSTSGCPF-GEGCHFAHYVPGGFKA 74
           A+N +GA   SK    S S+ +G    K++ C K F    CP+    CHFAH       A
Sbjct: 46  AINSDGAESPSKKTRSSSSSEIGKSFFKTKLCFK-FRAGTCPYSASSCHFAH------SA 105

Query: 75  ISQMISPAIPP--------GARN------PVGP-PSFPDGVSSPAVKTRLCNKFNSAEGC 131
               + P  PP         +RN       +GP  +    + SP  KTR+CNK+ +   C
Sbjct: 106 EELRLPPPPPPNWQETVTEASRNRESFAVSLGPRGNVAQTLKSPNWKTRICNKWQTTGYC 165

[Close]

BLAST of Lcy03g009820 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 58.9 bits (141), Expect = 8.0e-09
Identity = 41/124 (33.06%), Postives = 52/124 (41.94%), Query Frame = 0


Query: 34  TGLGSKSRPCTKFFSTSGCPFGEGCHFAH-YVPGGFKAISQMISP-AIPPGARNPVGPPS 93
           +G   K R C KF++  GCP+GE C F H       ++++  + P     G     G  S
Sbjct: 169 SGRSFKGRHCKKFYTEEGCPYGESCTFLHDEASRNRESVAISLGPGGYGSGGGGGSGGGS 228

Query: 94  FPDGVSSPAV-----------------------KTRLCNKFNSAEGCRFGDKCHFAHGEW 133
              G SS  V                       KTR+CNK+     C FG KCHFAHG  
Sbjct: 229 VGGGGSSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAA 288

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BLAST of Lcy03g009820 vs. TAIR 10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 56.2 bits (134), Expect = 5.2e-08
Identity = 40/111 (36.04%), Postives = 47/111 (42.34%), Query Frame = 0


Query: 43  CTKFFSTSGCPFGEGCHFAHYVPGGFKAISQMI--SPAIPPGARN--------------- 102
           C KF     CP+G+ C+F H     F+  S  +  S  I  GA                 
Sbjct: 189 CRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSVISVGATAADQPSDTASNLIEVN 248

Query: 103 -----PVGPPSFPDGVSSPAV-KTRLCNKFNSAEGCRFGDKCHFAHGEWEL 131
                PV  P    GV      KTRLC KF+    C FGDKCHFAHG+ EL
Sbjct: 249 RQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAEL 299

The following BLAST results are available for this feature:

BLAST of Lcy03g009820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7F8R0	4.6e-86	58.80	Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX...	[more]
Q7XPK1	5.1e-85	57.05	Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX...	[more]
Q69XQ3	1.8e-77	55.78	Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX...	[more]
Q9FG30	4.4e-60	47.84	Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9C7C3	2.4e-58	45.69	Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Lcy03g009820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JLI2	3.0e-160	93.40	zinc finger CCCH domain-containing protein 14-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1HDK7	4.3e-159	93.40	zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662...	[more]
A0A5A7TFZ9	1.2e-156	90.26	Zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo var. makuwa O...	[more]
A0A0A0M2L9	1.2e-156	90.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G605650 PE=4 SV=1	[more]
A0A5D3CR11	2.0e-156	89.68	Zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo var. makuwa O...	[more]

BLAST of Lcy03g009820 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6590234.1	6.1e-160	93.40	Non-structural maintenance of chromosomes element 4-like A, partial [Cucurbita a...	[more]
XP_022988178.1	6.1e-160	93.40	zinc finger CCCH domain-containing protein 14-like [Cucurbita maxima]	[more]
XP_022961279.1	8.8e-159	93.40	zinc finger CCCH domain-containing protein 14-like [Cucurbita moschata]	[more]
KAG7023875.1	1.5e-158	93.36	Zinc finger CCCH domain-containing protein 14, partial [Cucurbita argyrosperma s...	[more]
XP_023516879.1	2.2e-157	92.74	zinc finger CCCH domain-containing protein 14-like isoform X1 [Cucurbita pepo su...	[more]

BLAST of Lcy03g009820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06770.1	3.1e-61	47.84	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT3G12130.1	1.7e-59	45.69	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT2G35430.1	3.6e-09	34.81	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G32360.1	8.0e-09	33.06	Zinc finger (CCCH-type) family protein	[more]
AT3G19360.1	5.2e-08	36.04	Zinc finger (CCCH-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 172..242 e-value: 5.2E-11 score: 52.6
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 100..127 e-value: 0.001 score: 28.3 coord: 37..64 e-value: 1.6 score: 14.6 coord: 269..295 e-value: 9.2E-6 score: 35.2
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 270..295 e-value: 6.8E-6 score: 25.9 coord: 102..127 e-value: 4.4E-6 score: 26.4
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 269..296 score: 15.178044
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 100..128 score: 13.657011
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 37..65 score: 12.211089
None	No IPR available	GENE3D	4.10.1000.10		coord: 95..133 e-value: 3.9E-12 score: 47.3 coord: 266..300 e-value: 5.7E-12 score: 46.8
None	No IPR available	PFAM	PF14608	zf-CCCH_2	coord: 42..62 e-value: 0.19 score: 12.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 11..302
None	No IPR available	PANTHER	PTHR10288:SF246	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14	coord: 11..302
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 173..237 score: 13.627749
None	No IPR available	CDD	cd00105	KH-I	coord: 175..237 e-value: 2.16246E-12 score: 59.1107
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 176..239 e-value: 8.1E-9 score: 35.2
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 169..265 e-value: 5.4E-14 score: 53.9
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 163..243
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 269..299
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 99..131
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 38..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g009820.1	Lcy03g009820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding