Lcy03g009460 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g009460
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr03: 42513681 .. 42516214 (-)
RNA-Seq Expression	Lcy03g009460
Synteny	Lcy03g009460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAGAATATTGAACCAACATGGCGAAATGCAGGGCCGCCATTGCCGCCCTCATGGAGCTGTTCCTCAAGCTTCTTCAGTAAGTCCCTGTACGTTTTCAGAAAAATGATACGATGCGACTTCACCTCTAAGCTCTTCTTCTTACTCGATTCCTGCAAATCAATCCACCAAATCAAACAAACCCATGCTCAATTGATCACCACCGGCCTTATTCTACACCCAATCCCCACCAATAAACTCATCAAACTTCTTTCTTTCTCAAGATTCGCTTCCATTTCTTATGCCCACATGGTGTTCGACCATTTTCCCCAACCAGATCTCTTCCTCTACAACACAATAATCAAGGCCCACGCACTTTCAGCCACTTCCCCTGCAGATTCCTTCACCAGGTTTCGTTCTCTGGTCCGCGACGAAAGGTTAGTGCCCAATCAGTATTCGTTTGCATTCGCCTTCAAGGGGTGTGGCAATGGTGTTGGGGTCCTGGAAGGGGAGCAAGTTCGTGTTCATGCTGTTAAACTTGGTCTGGAGAACAATTTGTTTGTGACGAATGCGTTGATTGGGATGTATGTGAATTTGGGTCTTGTTGGGGATGCTAGGAAGGTGTTTGATTGGAGCCCAAATAGAGATATGTACTCGTGGAATATCATGCTTAGTGGGTATGCGAGATTGGGGAGAATGGATGAAGCTCGGGAACTGTTTGATGAAATGCCTGAAAGAGATGTTGTGTCGTGGACAACAATGATTGCTGGTTGTGTTCAGGTAAATAGATGAAAAACGAAGTTCATTCACTTTTTTGTTTGAGAATTTAGGTTCAGTTATAAGTTCGACCTTTAAACTTCCCAGGTTGTGTCGTTTGTAACTGTGTACTAGTTGTGTTTATTTAGTCTTACTCTTAAAAAGATTCTAATAAGTTTTTTAACTTTCAATCTTGTGTCAGTAATAGAGAGTTATTAGACACAAAACTGAAAGTTAAAGCATCTATTAGAAACTTTTTAAAGTAAAGAAGATTAGATGGACACAACAAATTTAACGACCTTTGTAGATCTTGTAGTTAAACACCAAAATGTTAACGTTCTATGGTTTTAATTACTTCTTGACACAGTAATATATGCTGGTATACGCTGTGCCATAGTGAGAAGCCATATTTACTTTCTTTGCGAGACAGAAGTACTTTTCTGTCTCGTTTCCTCGAACATGCCCCTGCATCCTTGGGGAAATCAAATGGTAAGCAATTACTGAGTATAACATGAATTGGGTTTAGTTCTAGCAGATTATTATGCTTCAAAAAGGCTGAAATATGATCTTCATCCATAGGTTGGTCATTTCATGGAGGCTTTGGATGTCTTTCACAAGATGCTGCAAAGAGGGGCAAGCCCGAATGAGTACACATTGGCCAGTGCCCTTGCAGCCTGTGCTAATCTCGTGGCATTGGATCAAGGAAGATGGATGCACGTTTATATTAGAAAGAAAGGTATTCAGATGAATGAACGGTTGCTGGCTGGACTCATTGATATGTATGCAAAATGTGGAGAGTTAGAGTTTGCATCAAAGCTTTTCAACAGCGAACGGCAGTTGAAGCGAAAGGTTTGGCCTTGGAATGCCATGATTGGTGGGTTTGCAATGCATGGGAAATCTAAGGAAGCAATTGAGGTTTTTGAACAAATGAAGGTAGAAAAAGTTTCTCCCAACAAAGTTACATTTGTTGCATTGTTAAATGCTTGTAGTCATGGGAACAGAGTTGAGGAAGGAAGAGGCTATTTTGAATCAATGGCGGGTCATTATGGAGTCAAACCTGAGTTAGAGCATTATGGATGTATGGTGGATCTACTAGGGCGTGCCGGGCGCTTGAAGGAAGCTGAAGAGATCATATCAAATATGCCTTTAACGCCAGATGTTGCTATTTGGGGTGCATTGCTTAGTGCCTGCAAAATTCATAAGGATATTGAAATGGGAGAGAGAATTGGGAAAATTGTTAGGGAGTTGGATTCTGACCATCTGGGTTGCCATGTTCTATTAGCAAATATATATTCTTTGACTGGGAATTGGAATGAAGCCAGGACATTGAGGGAGAAGATTGCAGTGAGCGGGAAAAAGAAAACTCCAGGTTGCAGCTCCATTGAGTTGAATGGGACATTCCATCAATTTCTCGTCGGTGATCGGTCCCATCCTCAAACAAAACAGCTCTATTTGTTCTTGGATGAGATGGCCACCAAGTTGAAGATTGCTGGTTACGTGCCTGAATCTGGAGAAGTTTTGCTCGACATCGATGACAACGAGGACAGAGAAACAGCTCTGTTAAAGCACAGTGAGAAGTTAGCTATTGCCTTCGGATTGATGAATACAGCACCTAGAACTCCAATCCGCATTGTGAAGAACTTGAGAGTATGTGGAGACTGTCATCAAGCGATAAAGTTCATTTCAAAGGTATACGATAGGGAGATCGTTGTTAGGGACCGGATTAGATATCACCATTTTAAAGATGGAACTTGTTCATGTAACGATTACTGGTAGCGTTTGTTGTGTACATTAAAAAT

mRNA sequence

CAAAAGAATATTGAACCAACATGGCGAAATGCAGGGCCGCCATTGCCGCCCTCATGGAGCTGTTCCTCAAGCTTCTTCAGTAAGTCCCTGTACGTTTTCAGAAAAATGATACGATGCGACTTCACCTCTAAGCTCTTCTTCTTACTCGATTCCTGCAAATCAATCCACCAAATCAAACAAACCCATGCTCAATTGATCACCACCGGCCTTATTCTACACCCAATCCCCACCAATAAACTCATCAAACTTCTTTCTTTCTCAAGATTCGCTTCCATTTCTTATGCCCACATGGTGTTCGACCATTTTCCCCAACCAGATCTCTTCCTCTACAACACAATAATCAAGGCCCACGCACTTTCAGCCACTTCCCCTGCAGATTCCTTCACCAGGTTTCGTTCTCTGGTCCGCGACGAAAGGTTAGTGCCCAATCAGTATTCGTTTGCATTCGCCTTCAAGGGGTGTGGCAATGGTGTTGGGGTCCTGGAAGGGGAGCAAGTTCGTGTTCATGCTGTTAAACTTGGTCTGGAGAACAATTTGTTTGTGACGAATGCGTTGATTGGGATGTATGTGAATTTGGGTCTTGTTGGGGATGCTAGGAAGGTGTTTGATTGGAGCCCAAATAGAGATATGTACTCGTGGAATATCATGCTTAGTGGGTATGCGAGATTGGGGAGAATGGATGAAGCTCGGGAACTGTTTGATGAAATGCCTGAAAGAGATGTTGTGTCGTGGACAACAATGATTGCTGGTTGTGTTCAGGTTGGTCATTTCATGGAGGCTTTGGATGTCTTTCACAAGATGCTGCAAAGAGGGGCAAGCCCGAATGAGTACACATTGGCCAGTGCCCTTGCAGCCTGTGCTAATCTCGTGGCATTGGATCAAGGAAGATGGATGCACGTTTATATTAGAAAGAAAGGTATTCAGATGAATGAACGGTTGCTGGCTGGACTCATTGATATGTATGCAAAATGTGGAGAGTTAGAGTTTGCATCAAAGCTTTTCAACAGCGAACGGCAGTTGAAGCGAAAGGTTTGGCCTTGGAATGCCATGATTGGTGGGTTTGCAATGCATGGGAAATCTAAGGAAGCAATTGAGGTTTTTGAACAAATGAAGGTAGAAAAAGTTTCTCCCAACAAAGTTACATTTGTTGCATTGTTAAATGCTTGTAGTCATGGGAACAGAGTTGAGGAAGGAAGAGGCTATTTTGAATCAATGGCGGGTCATTATGGAGTCAAACCTGAGTTAGAGCATTATGGATGTATGGTGGATCTACTAGGGCGTGCCGGGCGCTTGAAGGAAGCTGAAGAGATCATATCAAATATGCCTTTAACGCCAGATGTTGCTATTTGGGGTGCATTGCTTAGTGCCTGCAAAATTCATAAGGATATTGAAATGGGAGAGAGAATTGGGAAAATTGTTAGGGAGTTGGATTCTGACCATCTGGGTTGCCATGTTCTATTAGCAAATATATATTCTTTGACTGGGAATTGGAATGAAGCCAGGACATTGAGGGAGAAGATTGCAGTGAGCGGGAAAAAGAAAACTCCAGGTTGCAGCTCCATTGAGTTGAATGGGACATTCCATCAATTTCTCGTCGGTGATCGGTCCCATCCTCAAACAAAACAGCTCTATTTGTTCTTGGATGAGATGGCCACCAAGTTGAAGATTGCTGGTTACGTGCCTGAATCTGGAGAAGTTTTGCTCGACATCGATGACAACGAGGACAGAGAAACAGCTCTGTTAAAGCACAGTGAGAAGTTAGCTATTGCCTTCGGATTGATGAATACAGCACCTAGAACTCCAATCCGCATTGTGAAGAACTTGAGAGTATGTGGAGACTGTCATCAAGCGATAAAGTTCATTTCAAAGGTATACGATAGGGAGATCGTTGTTAGGGACCGGATTAGATATCACCATTTTAAAGATGGAACTTGTTCATGTAACGATTACTGGTAGCGTTTGTTGTGTACATTAAAAAT

Coding sequence (CDS)

ATGATACGATGCGACTTCACCTCTAAGCTCTTCTTCTTACTCGATTCCTGCAAATCAATCCACCAAATCAAACAAACCCATGCTCAATTGATCACCACCGGCCTTATTCTACACCCAATCCCCACCAATAAACTCATCAAACTTCTTTCTTTCTCAAGATTCGCTTCCATTTCTTATGCCCACATGGTGTTCGACCATTTTCCCCAACCAGATCTCTTCCTCTACAACACAATAATCAAGGCCCACGCACTTTCAGCCACTTCCCCTGCAGATTCCTTCACCAGGTTTCGTTCTCTGGTCCGCGACGAAAGGTTAGTGCCCAATCAGTATTCGTTTGCATTCGCCTTCAAGGGGTGTGGCAATGGTGTTGGGGTCCTGGAAGGGGAGCAAGTTCGTGTTCATGCTGTTAAACTTGGTCTGGAGAACAATTTGTTTGTGACGAATGCGTTGATTGGGATGTATGTGAATTTGGGTCTTGTTGGGGATGCTAGGAAGGTGTTTGATTGGAGCCCAAATAGAGATATGTACTCGTGGAATATCATGCTTAGTGGGTATGCGAGATTGGGGAGAATGGATGAAGCTCGGGAACTGTTTGATGAAATGCCTGAAAGAGATGTTGTGTCGTGGACAACAATGATTGCTGGTTGTGTTCAGGTTGGTCATTTCATGGAGGCTTTGGATGTCTTTCACAAGATGCTGCAAAGAGGGGCAAGCCCGAATGAGTACACATTGGCCAGTGCCCTTGCAGCCTGTGCTAATCTCGTGGCATTGGATCAAGGAAGATGGATGCACGTTTATATTAGAAAGAAAGGTATTCAGATGAATGAACGGTTGCTGGCTGGACTCATTGATATGTATGCAAAATGTGGAGAGTTAGAGTTTGCATCAAAGCTTTTCAACAGCGAACGGCAGTTGAAGCGAAAGGTTTGGCCTTGGAATGCCATGATTGGTGGGTTTGCAATGCATGGGAAATCTAAGGAAGCAATTGAGGTTTTTGAACAAATGAAGGTAGAAAAAGTTTCTCCCAACAAAGTTACATTTGTTGCATTGTTAAATGCTTGTAGTCATGGGAACAGAGTTGAGGAAGGAAGAGGCTATTTTGAATCAATGGCGGGTCATTATGGAGTCAAACCTGAGTTAGAGCATTATGGATGTATGGTGGATCTACTAGGGCGTGCCGGGCGCTTGAAGGAAGCTGAAGAGATCATATCAAATATGCCTTTAACGCCAGATGTTGCTATTTGGGGTGCATTGCTTAGTGCCTGCAAAATTCATAAGGATATTGAAATGGGAGAGAGAATTGGGAAAATTGTTAGGGAGTTGGATTCTGACCATCTGGGTTGCCATGTTCTATTAGCAAATATATATTCTTTGACTGGGAATTGGAATGAAGCCAGGACATTGAGGGAGAAGATTGCAGTGAGCGGGAAAAAGAAAACTCCAGGTTGCAGCTCCATTGAGTTGAATGGGACATTCCATCAATTTCTCGTCGGTGATCGGTCCCATCCTCAAACAAAACAGCTCTATTTGTTCTTGGATGAGATGGCCACCAAGTTGAAGATTGCTGGTTACGTGCCTGAATCTGGAGAAGTTTTGCTCGACATCGATGACAACGAGGACAGAGAAACAGCTCTGTTAAAGCACAGTGAGAAGTTAGCTATTGCCTTCGGATTGATGAATACAGCACCTAGAACTCCAATCCGCATTGTGAAGAACTTGAGAGTATGTGGAGACTGTCATCAAGCGATAAAGTTCATTTCAAAGGTATACGATAGGGAGATCGTTGTTAGGGACCGGATTAGATATCACCATTTTAAAGATGGAACTTGTTCATGTAACGATTACTGGTAG

Protein sequence

MIRCDFTSKLFFLLDSCKSIHQIKQTHAQLITTGLILHPIPTNKLIKLLSFSRFASISYAHMVFDHFPQPDLFLYNTIIKAHALSATSPADSFTRFRSLVRDERLVPNQYSFAFAFKGCGNGVGVLEGEQVRVHAVKLGLENNLFVTNALIGMYVNLGLVGDARKVFDWSPNRDMYSWNIMLSGYARLGRMDEARELFDEMPERDVVSWTTMIAGCVQVGHFMEALDVFHKMLQRGASPNEYTLASALAACANLVALDQGRWMHVYIRKKGIQMNERLLAGLIDMYAKCGELEFASKLFNSERQLKRKVWPWNAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVALLNACSHGNRVEEGRGYFESMAGHYGVKPELEHYGCMVDLLGRAGRLKEAEEIISNMPLTPDVAIWGALLSACKIHKDIEMGERIGKIVRELDSDHLGCHVLLANIYSLTGNWNEARTLREKIAVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKQLYLFLDEMATKLKIAGYVPESGEVLLDIDDNEDRETALLKHSEKLAIAFGLMNTAPRTPIRIVKNLRVCGDCHQAIKFISKVYDREIVVRDRIRYHHFKDGTCSCNDYW

Homology

[Close]

BLAST of Lcy03g009460 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 6.2e-154
Identity = 273/604 (45.20%), Postives = 378/604 (62.58%), Query Frame = 0


Query: 14  LDSCKSIHQIKQTHAQLITTGLILHPIPTNKLIKL-LSFSRFASISYAHMVFDHFPQPDL 73
           L  C    ++KQ HA+++ TGL+       K +   +S +    + YA +VFD F +PD 
Sbjct: 21  LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80

Query: 74  FLYNTIIKAHALSATSPADSFTRFRSLVRDERLVPNQYSFAFAFKGCGNGVGVLEGEQVR 133
           FL+N +I+  + S   P  S   ++ ++       N Y+F    K C N     E  Q+ 
Sbjct: 81  FLWNLMIRGFSCS-DEPERSLLLYQRMLCSS-APHNAYTFPSLLKACSNLSAFEETTQIH 140

Query: 134 VHAVKLGLENNLFVTNALIGMYVNLGLVGDARKVFDWSPNRDMYSWNIMLSGYARLGRMD 193
               KLG EN+++  N+LI  Y   G    A  +FD  P  D  SWN ++ GY + G+MD
Sbjct: 141 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 200

Query: 194 EARELFDEMPERDVVSWTTMIAGCVQVGHFMEALDVFHKMLQRGASPNEYTLASALAACA 253
            A  LF +M E++ +SWTTMI+G VQ     EAL +FH+M      P+  +LA+AL+ACA
Sbjct: 201 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 260

Query: 254 NLVALDQGRWMHVYIRKKGIQMNERLLAGLIDMYAKCGELEFASKLFNSERQLKRKVWPW 313
            L AL+QG+W+H Y+ K  I+M+  L   LIDMYAKCGE+E A ++F + +  K+ V  W
Sbjct: 261 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK--KKSVQAW 320

Query: 314 NAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVALLNACSHGNRVEEGRGYFESMAG 373
            A+I G+A HG  +EAI  F +M+   + PN +TF A+L ACS+   VEEG+  F SM  
Sbjct: 321 TALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMER 380

Query: 374 HYGVKPELEHYGCMVDLLGRAGRLKEAEEIISNMPLTPDVAIWGALLSACKIHKDIEMGE 433
            Y +KP +EHYGC+VDLLGRAG L EA+  I  MPL P+  IWGALL AC+IHK+IE+GE
Sbjct: 381 DYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGE 440

Query: 434 RIGKIVRELDSDHLGCHVLLANIYSLTGNWNEARTLREKIAVSGKKKTPGCSSIELNGTF 493
            IG+I+  +D  H G +V  ANI+++   W++A   R  +   G  K PGCS+I L GT 
Sbjct: 441 EIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTT 500

Query: 494 HQFLVGDRSHPQTKQLYLFLDEMATKLKIAGYVPESGEVLLDIDDNEDRETALLKHSEKL 553
           H+FL GDRSHP+ +++      M  KL+  GYVPE  E+LLD+ D+++RE  + +HSEKL
Sbjct: 501 HEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKL 560

Query: 554 AIAFGLMNTAPRTPIRIVKNLRVCGDCHQAIKFISKVYDREIVVRDRIRYHHFKDGTCSC 613
           AI +GL+ T P T IRI+KNLRVC DCH+  K ISK+Y R+IV+RDR R+HHF+DG CSC
Sbjct: 561 AITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSC 620

Query: 614 NDYW 617
            DYW
Sbjct: 621 GDYW 620

[Close]

BLAST of Lcy03g009460 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 4.4e-152
Identity = 279/708 (39.41%), Postives = 407/708 (57.49%), Query Frame = 0


Query: 13  LLDSCKSIHQIKQTHAQLITTGLILHPIPTNKLIKLLSFS-RFASISYAHMVFDHFPQPD 72
           LL +CK++  ++  HAQ+I  GL       +KLI+    S  F  + YA  VF    +P+
Sbjct: 39  LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPN 98

Query: 73  LFLYNTIIKAHALSATSPADSFTRFRSLVRDERLVPNQYSFAFAFKGCGNGVGVLEGEQV 132
           L ++NT+ + HALS + P  +   +  ++    L+PN Y+F F  K C       EG+Q+
Sbjct: 99  LLIWNTMFRGHALS-SDPVSALKLYVCMI-SLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 158

Query: 133 RVHAVKLGLENNLFVTNALIGMYVNLGLVGDARKVFDWSPNRDMYSWNIMLSGYARLGRM 192
             H +KLG + +L+V  +LI MYV  G + DA KVFD SP+RD+ S+  ++ GYA  G +
Sbjct: 159 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 218

Query: 193 DEARELFDEMPERDVVSWTTMIAGCVQVGHFMEALD------------------------ 252
           + A++LFDE+P +DVVSW  MI+G  + G++ EAL+                        
Sbjct: 219 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 278

Query: 253 ------------------------------------------------------------ 312
                                                                       
Sbjct: 279 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 338

Query: 313 -----------------VFHKMLQRGASPNEYTLASALAACANLVALDQGRWMHVYI--R 372
                            +F +ML+ G +PN+ T+ S L ACA+L A+D GRW+HVYI  R
Sbjct: 339 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 398

Query: 373 KKGIQMNERLLAGLIDMYAKCGELEFASKLFNSERQLKRKVWPWNAMIGGFAMHGKSKEA 432
            KG+     L   LIDMYAKCG++E A ++FNS   L + +  WNAMI GFAMHG++  +
Sbjct: 399 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS--ILHKSLSSWNAMIFGFAMHGRADAS 458

Query: 433 IEVFEQMKVEKVSPNKVTFVALLNACSHGNRVEEGRGYFESMAGHYGVKPELEHYGCMVD 492
            ++F +M+   + P+ +TFV LL+ACSH   ++ GR  F +M   Y + P+LEHYGCM+D
Sbjct: 459 FDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMID 518

Query: 493 LLGRAGRLKEAEEIISNMPLTPDVAIWGALLSACKIHKDIEMGERIGKIVRELDSDHLGC 552
           LLG +G  KEAEE+I+ M + PD  IW +LL ACK+H ++E+GE   + + +++ ++ G 
Sbjct: 519 LLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGS 578

Query: 553 HVLLANIYSLTGNWNEARTLREKIAVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKQL 612
           +VLL+NIY+  G WNE    R  +   G KK PGCSSIE++   H+F++GD+ HP+ +++
Sbjct: 579 YVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 638

Query: 613 YLFLDEMATKLKIAGYVPESGEVLLDIDDNEDRETALLKHSEKLAIAFGLMNTAPRTPIR 617
           Y  L+EM   L+ AG+VP++ EVL ++++ E +E AL  HSEKLAIAFGL++T P T + 
Sbjct: 639 YGMLEEMEVLLEKAGFVPDTSEVLQEMEE-EWKEGALRHHSEKLAIAFGLISTKPGTKLT 698

[Close]

BLAST of Lcy03g009460 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 3.2e-150
Identity = 267/626 (42.65%), Postives = 394/626 (62.94%), Query Frame = 0


Query: 8   SKLFFLLDSCKSIHQIKQTHAQLITTGLILHPIPTNKLIKLLSFS--RFASISYAHMVFD 67
           S LF  +++C++I  + Q HA  I +G +   +   ++++  + S      + YAH +F+
Sbjct: 24  SSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFN 83

Query: 68  HFPQPDLFLYNTIIKAHALSATSPA-DSFTRFRSLVRDERLVPNQYSFAFAFKGCGNGVG 127
             PQ + F +NTII+  + S    A  + T F  ++ DE + PN+++F    K C     
Sbjct: 84  QMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGK 143

Query: 128 VLEGEQVRVHAVKLGLENNLFVTNALIGMYVNLGLVGDARKVF--------------DWS 187
           + EG+Q+   A+K G   + FV + L+ MYV  G + DAR +F                 
Sbjct: 144 IQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRK 203

Query: 188 PNRDMYSWNIMLSGYARLGRMDEARELFDEMPERDVVSWTTMIAGCVQVGHFMEALDVFH 247
            + ++  WN+M+ GY RLG    AR LFD+M +R VVSW TMI+G    G F +A++VF 
Sbjct: 204 RDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFR 263

Query: 248 KMLQRGASPNEYTLASALAACANLVALDQGRWMHVYIRKKGIQMNERLLAGLIDMYAKCG 307
           +M +    PN  TL S L A + L +L+ G W+H+Y    GI++++ L + LIDMY+KCG
Sbjct: 264 EMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 323

Query: 308 ELEFASKLFNSERQLKRKVWPWNAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVAL 367
            +E A  +F  ER  +  V  W+AMI GFA+HG++ +AI+ F +M+   V P+ V ++ L
Sbjct: 324 IIEKAIHVF--ERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINL 383

Query: 368 LNACSHGNRVEEGRGYFESMAGHYGVKPELEHYGCMVDLLGRAGRLKEAEEIISNMPLTP 427
           L ACSHG  VEEGR YF  M    G++P +EHYGCMVDLLGR+G L EAEE I NMP+ P
Sbjct: 384 LTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKP 443

Query: 428 DVAIWGALLSACKIHKDIEMGERIGKIVRELDSDHLGCHVLLANIYSLTGNWNEARTLRE 487
           D  IW ALL AC++  ++EMG+R+  I+ ++     G +V L+N+Y+  GNW+E   +R 
Sbjct: 444 DDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRL 503

Query: 488 KIAVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKQLYLFLDEMATKLKIAGYVPESGE 547
           ++     +K PGCS I+++G  H+F+V D SHP+ K++   L E++ KL++AGY P + +
Sbjct: 504 RMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQ 563

Query: 548 VLLDIDDNEDRETALLKHSEKLAIAFGLMNTAPRTPIRIVKNLRVCGDCHQAIKFISKVY 607
           VLL++++ ED+E  L  HSEK+A AFGL++T+P  PIRIVKNLR+C DCH +IK ISKVY
Sbjct: 564 VLLNLEE-EDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVY 623

Query: 608 DREIVVRDRIRYHHFKDGTCSCNDYW 617
            R+I VRDR R+HHF+DG+CSC DYW
Sbjct: 624 KRKITVRDRKRFHHFQDGSCSCMDYW 646

[Close]

BLAST of Lcy03g009460 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 2.3e-148
Identity = 279/711 (39.24%), Postives = 396/711 (55.70%), Query Frame = 0


Query: 8   SKLFFLLDSCKSIHQIKQTHAQLITTGLILHPIPTNKLIKLLSFSRFASISYAHMVFDHF 67
           S+   L++ C S+ Q+KQTH  +I TG    P   +KL  + + S FAS+ YA  VFD  
Sbjct: 31  SRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEI 90

Query: 68  PQPDLFLYNTIIKAHALSATSPADSFTRFRSLVRDERLVPNQYSFAFAFK---------- 127
           P+P+ F +NT+I+A+A S   P  S   F  +V + +  PN+Y+F F  K          
Sbjct: 91  PKPNSFAWNTLIRAYA-SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 150

Query: 128 ----------------------------GCG------------------------NG--- 187
                                        CG                        NG   
Sbjct: 151 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 210

Query: 188 --------------------------VGVLE----------GEQVRVHAVKLGLENNLFV 247
                                     VGVL           G QV  +  +  +  NL +
Sbjct: 211 KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTL 270

Query: 248 TNALIGMYVNLGLVGDARKVFDWSPNRDMYSWNIMLSGYARLGRMDEARELFDEMPERDV 307
            NA++ MY   G + DA+++FD    +D  +W  ML GYA     + ARE+ + MP++D+
Sbjct: 271 ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDI 330

Query: 308 VSWTTMIAGCVQVGHFMEALDVFHKM-LQRGASPNEYTLASALAACANLVALDQGRWMHV 367
           V+W  +I+   Q G   EAL VFH++ LQ+    N+ TL S L+ACA + AL+ GRW+H 
Sbjct: 331 VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHS 390

Query: 368 YIRKKGIQMNERLLAGLIDMYAKCGELEFASKLFNSERQLKRKVWPWNAMIGGFAMHGKS 427
           YI+K GI+MN  + + LI MY+KCG+LE + ++FNS    KR V+ W+AMIGG AMHG  
Sbjct: 391 YIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE--KRDVFVWSAMIGGLAMHGCG 450

Query: 428 KEAIEVFEQMKVEKVSPNKVTFVALLNACSHGNRVEEGRGYFESMAGHYGVKPELEHYGC 487
            EA+++F +M+   V PN VTF  +  ACSH   V+E    F  M  +YG+ PE +HY C
Sbjct: 451 NEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC 510

Query: 488 MVDLLGRAGRLKEAEEIISNMPLTPDVAIWGALLSACKIHKDIEMGERIGKIVRELDSDH 547
           +VD+LGR+G L++A + I  MP+ P  ++WGALL ACKIH ++ + E     + EL+  +
Sbjct: 511 IVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRN 570

Query: 548 LGCHVLLANIYSLTGNWNEARTLREKIAVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQT 607
            G HVLL+NIY+  G W     LR+ + V+G KK PGCSSIE++G  H+FL GD +HP +
Sbjct: 571 DGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMS 630

Query: 608 KQLYLFLDEMATKLKIAGYVPESGEVLLDIDDNEDRETALLKHSEKLAIAFGLMNTAPRT 617
           +++Y  L E+  KLK  GY PE  +VL  I++ E +E +L  HSEKLAI +GL++T    
Sbjct: 631 EKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPK 690

[Close]

BLAST of Lcy03g009460 vs. ExPASy Swiss-Prot
Match: Q683I9 (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H82 PE=2 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 2.9e-143
Identity = 250/570 (43.86%), Postives = 379/570 (66.49%), Query Frame = 0


Query: 55  ASISYAHMVFD-HFPQPDLFLYNTIIKAHALSATSP-ADSFTRFRSLVRDERLVPNQYSF 114
           A I+YA+ +F     + + FL+N II+A   + +SP   S       +R+ R+ P+ ++F
Sbjct: 6   AIIAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTF 65

Query: 115 AFAFKGCGNGVGVLEGEQVRVHAVKLGLENNLFVTNALIGMYVNLGLVGDARKVFDWSPN 174
            F      N + +  G++     +  GL+ + FV  +L+ MY + G +  A++VFD S +
Sbjct: 66  PFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGS 125

Query: 175 RDMYSWNIMLSGYARLGRMDEARELFDEMPERDVVSWTTMIAGCVQVGHFMEALDVFHKM 234
           +D+ +WN +++ YA+ G +D+AR+LFDEMPER+V+SW+ +I G V  G + EALD+F +M
Sbjct: 126 KDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREM 185

Query: 235 L-----QRGASPNEYTLASALAACANLVALDQGRWMHVYIRKKGIQMNERLLAGLIDMYA 294
                 +    PNE+T+++ L+AC  L AL+QG+W+H YI K  ++++  L   LIDMYA
Sbjct: 186 QLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYA 245

Query: 295 KCGELEFASKLFNSERQLKRKVWPWNAMIGGFAMHGKSKEAIEVFEQMKV-EKVSPNKVT 354
           KCG LE A ++FN+    K+ V  ++AMI   AM+G + E  ++F +M   + ++PN VT
Sbjct: 246 KCGSLERAKRVFNALGS-KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVT 305

Query: 355 FVALLNACSHGNRVEEGRGYFESMAGHYGVKPELEHYGCMVDLLGRAGRLKEAEEIISNM 414
           FV +L AC H   + EG+ YF+ M   +G+ P ++HYGCMVDL GR+G +KEAE  I++M
Sbjct: 306 FVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASM 365

Query: 415 PLTPDVAIWGALLSACKIHKDIEMGERIGKIVRELDSDHLGCHVLLANIYSLTGNWNEAR 474
           P+ PDV IWG+LLS  ++  DI+  E   K + ELD  + G +VLL+N+Y+ TG W E +
Sbjct: 366 PMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVK 425

Query: 475 TLREKIAVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKQLYLFLDEMATKLKIAGYVP 534
            +R ++ V G  K PGCS +E+ G  H+F+VGD S  +++++Y  LDE+  +L+ AGYV 
Sbjct: 426 CIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVT 485

Query: 535 ESGEVLLDIDDNEDRETALLKHSEKLAIAFGLMNTAPRTPIRIVKNLRVCGDCHQAIKFI 594
           ++ EVLLD+++ +D+E AL  HSEKLAIAF LM T P TP+RI+KNLR+CGDCH  +K I
Sbjct: 486 DTKEVLLDLNE-KDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMI 545

Query: 595 SKVYDREIVVRDRIRYHHFKDGTCSCNDYW 617
           SK++ REIVVRD  R+HHF+DG+CSC D+W
Sbjct: 546 SKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573

[Close]

BLAST of Lcy03g009460 vs. ExPASy TrEMBL
Match: A0A6J1EIF4 (pentatricopeptide repeat-containing protein At3g62890-like OS=Cucurbita moschata OX=3662 GN=LOC111434526 PE=3 SV=1)

HSP 1 Score: 1184.1 bits (3062), Expect = 0.0e+00
Identity = 568/616 (92.21%), Postives = 590/616 (95.78%), Query Frame = 0


Query: 1   MIRCDFTSKLFFLLDSCKSIHQIKQTHAQLITTGLILHPIPTNKLIKLLSFSRFASISYA 60
           MIR DFTSKLFFLLD CKSIHQIKQTHAQLITTGL+LHPI TNKL+KLLSFSRFASISYA
Sbjct: 1   MIRYDFTSKLFFLLDFCKSIHQIKQTHAQLITTGLVLHPIATNKLLKLLSFSRFASISYA 60

Query: 61  HMVFDHFPQPDLFLYNTIIKAHALSATSPADSFTRFRSLVRDERLVPNQYSFAFAFKGCG 120
            MVFDHFPQPDLFLYNTIIKAHALSATS ADSFTRFRSL+RD RLVPNQYSFAFAFKGCG
Sbjct: 61  QMVFDHFPQPDLFLYNTIIKAHALSATSSADSFTRFRSLIRDGRLVPNQYSFAFAFKGCG 120

Query: 121 NGVGVLEGEQVRVHAVKLGLENNLFVTNALIGMYVNLGLVGDARKVFDWSPNRDMYSWNI 180
           N VGVLEGEQVR HAVKLGLENNLFV NALIGMYVNLG+VGDARKVFDWS  RDMYSWNI
Sbjct: 121 NAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNLGVVGDARKVFDWSTIRDMYSWNI 180

Query: 181 MLSGYARLGRMDEARELFDEMPERDVVSWTTMIAGCVQVGHFMEALDVFHKMLQRGASPN 240
           MLSGYA+LG+MD+ARELFDEMPERDVVSWTTMIAGCVQVGHFMEALD+FHKMLQ+G  PN
Sbjct: 181 MLSGYAKLGKMDDARELFDEMPERDVVSWTTMIAGCVQVGHFMEALDIFHKMLQKGVGPN 240

Query: 241 EYTLASALAACANLVALDQGRWMHVYIRKKGIQMNERLLAGLIDMYAKCGELEFASKLFN 300
           EYTLASALAACANLVALDQGRWMHVYIRK  I +N+RLLAGLIDMY KCGELEFASKLFN
Sbjct: 241 EYTLASALAACANLVALDQGRWMHVYIRKNEIPLNDRLLAGLIDMYVKCGELEFASKLFN 300

Query: 301 SERQLKRKVWPWNAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVALLNACSHGNRV 360
           SER   RKVWPWNAMIGGFAMHGKSKEAIE+FEQMKVEKVSPNKVTFVALLNACSHGNRV
Sbjct: 301 SERMSIRKVWPWNAMIGGFAMHGKSKEAIELFEQMKVEKVSPNKVTFVALLNACSHGNRV 360

Query: 361 EEGRGYFESMAGHYGVKPELEHYGCMVDLLGRAGRLKEAEEIISNMPLTPDVAIWGALLS 420
           EEGRGYFESMAG +GV+PELEHYGCMVDLLGR+GRLKEAEEIIS+MPL PDVAIWGALLS
Sbjct: 361 EEGRGYFESMAGRFGVEPELEHYGCMVDLLGRSGRLKEAEEIISSMPLAPDVAIWGALLS 420

Query: 421 ACKIHKDIEMGERIGKIVRELDSDHLGCHVLLANIYSLTGNWNEARTLREKIAVSGKKKT 480
           ACK HKDIEMGERIGKIVRELDSDHLGCHVLLAN+YSLTGNWNEARTLREKIAVSGKKKT
Sbjct: 421 ACKTHKDIEMGERIGKIVRELDSDHLGCHVLLANMYSLTGNWNEARTLREKIAVSGKKKT 480

Query: 481 PGCSSIELNGTFHQFLVGDRSHPQTKQLYLFLDEMATKLKIAGYVPESGEVLLDIDDNED 540
           PGCSSIELNGTFHQFLVGDRSHPQTK+LY+FLDEM TKLK+AGY+PESGEVLLDIDDNED
Sbjct: 481 PGCSSIELNGTFHQFLVGDRSHPQTKELYMFLDEMTTKLKMAGYIPESGEVLLDIDDNED 540

Query: 541 RETALLKHSEKLAIAFGLMNTAPRTPIRIVKNLRVCGDCHQAIKFISKVYDREIVVRDRI 600
           RETALLKHSEKLAIAFGLMNTAP+TPIRIVKNLRVCGDCH AIKFISKVYDREIVVRDRI
Sbjct: 541 RETALLKHSEKLAIAFGLMNTAPKTPIRIVKNLRVCGDCHLAIKFISKVYDREIVVRDRI 600

Query: 601 RYHHFKDGTCSCNDYW 617
           RYHHFKDG CSCNDYW
Sbjct: 601 RYHHFKDGACSCNDYW 616

[Close]

BLAST of Lcy03g009460 vs. ExPASy TrEMBL
Match: A0A6J1HU41 (pentatricopeptide repeat-containing protein At5g66520-like OS=Cucurbita maxima OX=3661 GN=LOC111466592 PE=3 SV=1)

HSP 1 Score: 1167.9 bits (3020), Expect = 0.0e+00
Identity = 563/616 (91.40%), Postives = 584/616 (94.81%), Query Frame = 0


Query: 1   MIRCDFTSKLFFLLDSCKSIHQIKQTHAQLITTGLILHPIPTNKLIKLLSFSRFASISYA 60
           MIR DFTSKLFFLLD CKSIHQIKQTHAQLITTGL+LHPI TNKL+KLLSFSRF SISYA
Sbjct: 1   MIRYDFTSKLFFLLDFCKSIHQIKQTHAQLITTGLVLHPIATNKLLKLLSFSRFGSISYA 60

Query: 61  HMVFDHFPQPDLFLYNTIIKAHALSATSPADSFTRFRSLVRDERLVPNQYSFAFAFKGCG 120
            MVFDHFPQPDLFLYNTIIKAHA+SATS ADSFTRFRSL+RD  LVPNQYSFAFAFKGCG
Sbjct: 61  QMVFDHFPQPDLFLYNTIIKAHAISATSSADSFTRFRSLIRDGSLVPNQYSFAFAFKGCG 120

Query: 121 NGVGVLEGEQVRVHAVKLGLENNLFVTNALIGMYVNLGLVGDARKVFDWSPNRDMYSWNI 180
           N VGVLEGEQVRVHAVKLGLENNLFV NALIGMYVNLG VGDARKVFDWS  RDMYSWNI
Sbjct: 121 NAVGVLEGEQVRVHAVKLGLENNLFVMNALIGMYVNLGFVGDARKVFDWSTIRDMYSWNI 180

Query: 181 MLSGYARLGRMDEARELFDEMPERDVVSWTTMIAGCVQVGHFMEALDVFHKMLQRGASPN 240
           MLSGYA+LG+MD+ARELFDEMPERDVVSWTTMIAGCVQVGHFM ALD+FHKMLQ+G   N
Sbjct: 181 MLSGYAKLGKMDDARELFDEMPERDVVSWTTMIAGCVQVGHFMGALDIFHKMLQKGVGLN 240

Query: 241 EYTLASALAACANLVALDQGRWMHVYIRKKGIQMNERLLAGLIDMYAKCGELEFASKLFN 300
           EYTLASALAACANLVALDQGRWMHVYIRK  IQ+N+RLLAGLIDMY KCGELEFA KLFN
Sbjct: 241 EYTLASALAACANLVALDQGRWMHVYIRKNEIQLNDRLLAGLIDMYVKCGELEFALKLFN 300

Query: 301 SERQLKRKVWPWNAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVALLNACSHGNRV 360
           SER   RKVWPWNAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVALLNACSHGNRV
Sbjct: 301 SERMSIRKVWPWNAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVALLNACSHGNRV 360

Query: 361 EEGRGYFESMAGHYGVKPELEHYGCMVDLLGRAGRLKEAEEIISNMPLTPDVAIWGALLS 420
           EEGR YFESMAG YGV+PELEHYGCMVDLLGR+GRLKEAEEIIS+MP+T DVAIWGALLS
Sbjct: 361 EEGRRYFESMAGLYGVEPELEHYGCMVDLLGRSGRLKEAEEIISSMPMTADVAIWGALLS 420

Query: 421 ACKIHKDIEMGERIGKIVRELDSDHLGCHVLLANIYSLTGNWNEARTLREKIAVSGKKKT 480
           ACK HKDIEMGERIGKIV ELDSDHLGCHVLLAN+YSLTGNWNEARTLREKIAVSGKKKT
Sbjct: 421 ACKTHKDIEMGERIGKIVTELDSDHLGCHVLLANMYSLTGNWNEARTLREKIAVSGKKKT 480

Query: 481 PGCSSIELNGTFHQFLVGDRSHPQTKQLYLFLDEMATKLKIAGYVPESGEVLLDIDDNED 540
           PGCSSIELNGTFHQFLVGDRSHPQTK+LY+ LDEM TKLK+AGY+PESGEVLLDIDD+ED
Sbjct: 481 PGCSSIELNGTFHQFLVGDRSHPQTKELYMLLDEMTTKLKMAGYIPESGEVLLDIDDDED 540

Query: 541 RETALLKHSEKLAIAFGLMNTAPRTPIRIVKNLRVCGDCHQAIKFISKVYDREIVVRDRI 600
           RETALLKHSEKLAIAFGLMNTAPRTPIRIVKNLRVCGDCHQAIKFISKVYDREIVVRDRI
Sbjct: 541 RETALLKHSEKLAIAFGLMNTAPRTPIRIVKNLRVCGDCHQAIKFISKVYDREIVVRDRI 600

Query: 601 RYHHFKDGTCSCNDYW 617
           RYHHFKDG CSCNDYW
Sbjct: 601 RYHHFKDGACSCNDYW 616

[Close]

BLAST of Lcy03g009460 vs. ExPASy TrEMBL
Match: A0A0A0LX83 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G612890 PE=3 SV=1)

HSP 1 Score: 1134.4 bits (2933), Expect = 0.0e+00
Identity = 546/616 (88.64%), Postives = 575/616 (93.34%), Query Frame = 0


Query: 1   MIRCDFTSKLFFLLDSCKSIHQIKQTHAQLITTGLILHPIPTNKLIKLLSFSRFASISYA 60
           M+RCD      FLL SCKS  QIKQ HA+LITTGLILHPIPTNKL+K LS S FA ISYA
Sbjct: 1   MVRCD------FLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYA 60

Query: 61  HMVFDHFPQPDLFLYNTIIKAHALSATSPADSFTRFRSLVRDERLVPNQYSFAFAFKGCG 120
           HMVFDHFPQPDLFLYNTIIK  A S TS ADSFT+FRSL+R+ERLVPNQYSFAFAFKGCG
Sbjct: 61  HMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCG 120

Query: 121 NGVGVLEGEQVRVHAVKLGLENNLFVTNALIGMYVNLGLVGDARKVFDWSPNRDMYSWNI 180
           +GVGVLEGEQVRVHA+KLGLENNLFVTNALIGMYVNL  V DARKVFDWSPNRDMYSWNI
Sbjct: 121 SGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNI 180

Query: 181 MLSGYARLGRMDEARELFDEMPERDVVSWTTMIAGCVQVGHFMEALDVFHKMLQRGASPN 240
           MLSGYARLG+MDEAR+LFDEMPE+DVVSWTTMI+GC+QVG+FMEALD+FH ML +G SPN
Sbjct: 181 MLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPN 240

Query: 241 EYTLASALAACANLVALDQGRWMHVYIRKKGIQMNERLLAGLIDMYAKCGELEFASKLFN 300
           EYTLAS+LAACANLVALDQGRWMHVYI+K  IQMNERLLAGLIDMYAKCGELEFASKLFN
Sbjct: 241 EYTLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFN 300

Query: 301 SERQLKRKVWPWNAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVALLNACSHGNRV 360
           S  +LKRKVWPWNAMIGGFA+HGKSKEAIEVFEQMK+EKVSPNKVTFVALLNACSHGNRV
Sbjct: 301 SNPRLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRV 360

Query: 361 EEGRGYFESMAGHYGVKPELEHYGCMVDLLGRAGRLKEAEEIISNMPLTPDVAIWGALLS 420
           EEGR YFESMA HY VKPELEHYGC+VDLLGRAGRLKEAEEIIS+M LTPDVAIWGALLS
Sbjct: 361 EEGRYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLS 420

Query: 421 ACKIHKDIEMGERIGKIVRELDSDHLGCHVLLANIYSLTGNWNEARTLREKIAVSGKKKT 480
           ACKIHKD EMGER+GKIV+ELD +HLGCHVLLANIYSLTGNWNEARTLREKIA SGKKKT
Sbjct: 421 ACKIHKDAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESGKKKT 480

Query: 481 PGCSSIELNGTFHQFLVGDRSHPQTKQLYLFLDEMATKLKIAGYVPESGEVLLDIDDNED 540
           PGCSSIELNG FHQFLVGDRSHPQTKQLYLFLDEM TKLKIAGY+PESGEVLLDIDDNED
Sbjct: 481 PGCSSIELNGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGYIPESGEVLLDIDDNED 540

Query: 541 RETALLKHSEKLAIAFGLMNTAPRTPIRIVKNLRVCGDCHQAIKFISKVYDREIVVRDRI 600
           RETALLKHSEKLAIAFGLMNT P+TPIRIVKNLRVC DCH AIKFISKVYDREI+VRDRI
Sbjct: 541 RETALLKHSEKLAIAFGLMNTTPKTPIRIVKNLRVCSDCHLAIKFISKVYDREIIVRDRI 600

Query: 601 RYHHFKDGTCSCNDYW 617
           RYHHFKDGTCSCNDYW
Sbjct: 601 RYHHFKDGTCSCNDYW 609

[Close]

BLAST of Lcy03g009460 vs. ExPASy TrEMBL
Match: A0A1S3BNM1 (pentatricopeptide repeat-containing protein At5g66520-like OS=Cucumis melo OX=3656 GN=LOC103492046 PE=3 SV=1)

HSP 1 Score: 1129.4 bits (2920), Expect = 0.0e+00
Identity = 545/616 (88.47%), Postives = 574/616 (93.18%), Query Frame = 0


Query: 1   MIRCDFTSKLFFLLDSCKSIHQIKQTHAQLITTGLILHPIPTNKLIKLLSFSRFASISYA 60
           M+RCD      FLL SCKS  QIKQ HAQLIT+GLILHPIPTNKL+K LS S FA ISYA
Sbjct: 1   MVRCD------FLLGSCKSFRQIKQVHAQLITSGLILHPIPTNKLLKQLS-SIFAPISYA 60

Query: 61  HMVFDHFPQPDLFLYNTIIKAHALSATSPADSFTRFRSLVRDERLVPNQYSFAFAFKGCG 120
           HMVFDHFPQPDLFLYNTIIK  A S TS ADSFTRFRSL+R+ERLVPNQYSFAFAFK CG
Sbjct: 61  HMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTRFRSLIREERLVPNQYSFAFAFKACG 120

Query: 121 NGVGVLEGEQVRVHAVKLGLENNLFVTNALIGMYVNLGLVGDARKVFDWSPNRDMYSWNI 180
           +GVGVLEGEQVRVHA+KLGLENNLFVTNALIGMYVNL  V DARKVF+WSP RDMYSWNI
Sbjct: 121 SGVGVLEGEQVRVHALKLGLENNLFVTNALIGMYVNLDFVVDARKVFEWSPYRDMYSWNI 180

Query: 181 MLSGYARLGRMDEARELFDEMPERDVVSWTTMIAGCVQVGHFMEALDVFHKMLQRGASPN 240
           MLSGYARLG+MDEAR+LFDEMPERDVVSWTTMI+GC+QVGHFMEA+D+FH ML +G SPN
Sbjct: 181 MLSGYARLGKMDEARQLFDEMPERDVVSWTTMISGCLQVGHFMEAVDIFHNMLAKGMSPN 240

Query: 241 EYTLASALAACANLVALDQGRWMHVYIRKKGIQMNERLLAGLIDMYAKCGELEFASKLFN 300
           E+TLASAL+ACANLVALDQGRWMHVYI+K  IQMNERLLAGLIDMYAKCGELEFASKLFN
Sbjct: 241 EHTLASALSACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFN 300

Query: 301 SERQLKRKVWPWNAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVALLNACSHGNRV 360
           S  QL RKVWPWNAMIGGFA+HGKSKEAIEVFEQMK+EKVSPNKVTFV+LLNACSHGNRV
Sbjct: 301 SNPQLMRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVSLLNACSHGNRV 360

Query: 361 EEGRGYFESMAGHYGVKPELEHYGCMVDLLGRAGRLKEAEEIISNMPLTPDVAIWGALLS 420
           +EGR YFESMA HYGVKP LEHYGC+VDLLGRAGRLKEAEEIIS+M LTPDVAIWGALLS
Sbjct: 361 KEGRYYFESMASHYGVKPVLEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLS 420

Query: 421 ACKIHKDIEMGERIGKIVRELDSDHLGCHVLLANIYSLTGNWNEARTLREKIAVSGKKKT 480
           ACKIHKD+EMGERIGKIV+ELD +HLGCHVLLANIYSLTGNWNEARTLREKIAVSGKKKT
Sbjct: 421 ACKIHKDVEMGERIGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAVSGKKKT 480

Query: 481 PGCSSIELNGTFHQFLVGDRSHPQTKQLYLFLDEMATKLKIAGYVPESGEVLLDIDDNED 540
           PGCSSIELNG FHQFLVGDRSHPQTKQLYLFLDEM TKLKIAGYVPESGEVLLDIDDNED
Sbjct: 481 PGCSSIELNGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGYVPESGEVLLDIDDNED 540

Query: 541 RETALLKHSEKLAIAFGLMNTAPRTPIRIVKNLRVCGDCHQAIKFISKVYDREIVVRDRI 600
           RETALLKHSEKLAIAFGLMNT P+TPIRIVKNLRVC DCH AIKFISKVYDREI+VRDRI
Sbjct: 541 RETALLKHSEKLAIAFGLMNTTPKTPIRIVKNLRVCNDCHLAIKFISKVYDREIIVRDRI 600

Query: 601 RYHHFKDGTCSCNDYW 617
           RYHHFKDGTCSCNDYW
Sbjct: 601 RYHHFKDGTCSCNDYW 609

[Close]

BLAST of Lcy03g009460 vs. ExPASy TrEMBL
Match: A0A5D3D5I7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00080 PE=3 SV=1)

HSP 1 Score: 1054.3 bits (2725), Expect = 2.0e-304
Identity = 502/555 (90.45%), Postives = 527/555 (94.95%), Query Frame = 0


Query: 62  MVFDHFPQPDLFLYNTIIKAHALSATSPADSFTRFRSLVRDERLVPNQYSFAFAFKGCGN 121
           MVFDHFPQPDLFLYNTIIK  A S TS ADSFTRFRSL+R+ERLVPNQYSFAFAFK CG+
Sbjct: 1   MVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTRFRSLIREERLVPNQYSFAFAFKACGS 60

Query: 122 GVGVLEGEQVRVHAVKLGLENNLFVTNALIGMYVNLGLVGDARKVFDWSPNRDMYSWNIM 181
           GVGVLEGEQVRVHA+KLGLENNLFVTNALIGMYVNL  V DARKVF+WSP RDMYSWNIM
Sbjct: 61  GVGVLEGEQVRVHALKLGLENNLFVTNALIGMYVNLDFVVDARKVFEWSPYRDMYSWNIM 120

Query: 182 LSGYARLGRMDEARELFDEMPERDVVSWTTMIAGCVQVGHFMEALDVFHKMLQRGASPNE 241
           LSGYARLG+MDEAR+LFDEMPERDVVSWTTMI+GC+QVGHFMEALD+FH ML +G SPNE
Sbjct: 121 LSGYARLGKMDEARQLFDEMPERDVVSWTTMISGCLQVGHFMEALDIFHNMLAKGMSPNE 180

Query: 242 YTLASALAACANLVALDQGRWMHVYIRKKGIQMNERLLAGLIDMYAKCGELEFASKLFNS 301
           +TLASAL+ACANLVALDQGRWMHVYI+K  IQMNERLLAGLIDMYAKCGELEFASKLFNS
Sbjct: 181 HTLASALSACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFNS 240

Query: 302 ERQLKRKVWPWNAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVALLNACSHGNRVE 361
             QL RKVWPWNAMIGGFA+HGKSKEAIEVFEQMK+EKVSPNKVTFV+LLNACSHGNRV+
Sbjct: 241 NPQLMRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVSLLNACSHGNRVK 300

Query: 362 EGRGYFESMAGHYGVKPELEHYGCMVDLLGRAGRLKEAEEIISNMPLTPDVAIWGALLSA 421
           EGR YFESMA HYGVKP LEHYGC+VDLLGRAGRLKEAEEIIS+M LTPDVAIWGALLSA
Sbjct: 301 EGRYYFESMASHYGVKPVLEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLSA 360

Query: 422 CKIHKDIEMGERIGKIVRELDSDHLGCHVLLANIYSLTGNWNEARTLREKIAVSGKKKTP 481
           CKIHKD+EMGERIGKIV+ELD +HLGCHVLLANIYSLTGNWNEARTLREKIAVSGKKKTP
Sbjct: 361 CKIHKDVEMGERIGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAVSGKKKTP 420

Query: 482 GCSSIELNGTFHQFLVGDRSHPQTKQLYLFLDEMATKLKIAGYVPESGEVLLDIDDNEDR 541
           GCSSIELNG FHQFLVGDRSHPQTKQLYLFLDEM TKLKIAGYVPESGEVLLDIDDNEDR
Sbjct: 421 GCSSIELNGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGYVPESGEVLLDIDDNEDR 480

Query: 542 ETALLKHSEKLAIAFGLMNTAPRTPIRIVKNLRVCGDCHQAIKFISKVYDREIVVRDRIR 601
           ETALLKHSEKLAIAFGLMNT P+TPIRIVKNLRVC DCH AIKFISKVYDREI+VRDRIR
Sbjct: 481 ETALLKHSEKLAIAFGLMNTTPKTPIRIVKNLRVCNDCHLAIKFISKVYDREIIVRDRIR 540

Query: 602 YHHFKDGTCSCNDYW 617
           YHHFKDGTCSCNDYW
Sbjct: 541 YHHFKDGTCSCNDYW 555

[Close]

BLAST of Lcy03g009460 vs. NCBI nr
Match: XP_038878435.1 (pentatricopeptide repeat-containing protein At5g66520-like [Benincasa hispida])

HSP 1 Score: 1187.2 bits (3070), Expect = 0.0e+00
Identity = 566/616 (91.88%), Postives = 591/616 (95.94%), Query Frame = 0


Query: 1   MIRCDFTSKLFFLLDSCKSIHQIKQTHAQLITTGLILHPIPTNKLIKLLSFSRFASISYA 60
           MIRCDFTSKLFFLLDSCKSIHQIKQ HAQLITTGLI+HPIPTNKL+KL+S SRFA ISYA
Sbjct: 1   MIRCDFTSKLFFLLDSCKSIHQIKQVHAQLITTGLIVHPIPTNKLLKLISSSRFAPISYA 60

Query: 61  HMVFDHFPQPDLFLYNTIIKAHALSATSPADSFTRFRSLVRDERLVPNQYSFAFAFKGCG 120
           HMVFDH PQPDLFLYNTIIKA ALS TS ADSFTRFRSL+R+ERLVPNQYSFAF FKGCG
Sbjct: 61  HMVFDHCPQPDLFLYNTIIKALALSTTSSADSFTRFRSLIREERLVPNQYSFAFVFKGCG 120

Query: 121 NGVGVLEGEQVRVHAVKLGLENNLFVTNALIGMYVNLGLVGDARKVFDWSPNRDMYSWNI 180
           NGVGVLEGEQVRVHAVKLGLENNLFV NALIGMYVNLG V DARKVFDWSPNRDMYSWNI
Sbjct: 121 NGVGVLEGEQVRVHAVKLGLENNLFVMNALIGMYVNLGFVVDARKVFDWSPNRDMYSWNI 180

Query: 181 MLSGYARLGRMDEARELFDEMPERDVVSWTTMIAGCVQVGHFMEALDVFHKMLQRGASPN 240
           MLSGYARLG+MDEAR+LFDEMPERDVVSWTTMI+GC+QVGHFMEALD+FH ML+ GASPN
Sbjct: 181 MLSGYARLGKMDEARQLFDEMPERDVVSWTTMISGCLQVGHFMEALDIFHNMLENGASPN 240

Query: 241 EYTLASALAACANLVALDQGRWMHVYIRKKGIQMNERLLAGLIDMYAKCGELEFASKLFN 300
           EYTLASALAACANLVALDQGRWMHVYI+K  IQMNERLLAGLIDMYAKCGELEFASKLF 
Sbjct: 241 EYTLASALAACANLVALDQGRWMHVYIKKNDIQMNERLLAGLIDMYAKCGELEFASKLFK 300

Query: 301 SERQLKRKVWPWNAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVALLNACSHGNRV 360
           SERQLKRKVWPWNAM+GGFAMHGKSKEAIEVFEQMK E+VSPNKVTFVALLNACSHGNRV
Sbjct: 301 SERQLKRKVWPWNAMVGGFAMHGKSKEAIEVFEQMKRERVSPNKVTFVALLNACSHGNRV 360

Query: 361 EEGRGYFESMAGHYGVKPELEHYGCMVDLLGRAGRLKEAEEIISNMPLTPDVAIWGALLS 420
           EEG+ YFESMA HYG++PELEHYGC+VDLLGRAGRLKEAEEIISNMPLTPDV IWGALLS
Sbjct: 361 EEGKCYFESMASHYGLEPELEHYGCLVDLLGRAGRLKEAEEIISNMPLTPDVVIWGALLS 420

Query: 421 ACKIHKDIEMGERIGKIVRELDSDHLGCHVLLANIYSLTGNWNEARTLREKIAVSGKKKT 480
            CKIHKD+EMGERIGKIV+ELD +HLGCHVLLANIYSLTGNWNEARTLREKIAVSGKKKT
Sbjct: 421 GCKIHKDVEMGERIGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAVSGKKKT 480

Query: 481 PGCSSIELNGTFHQFLVGDRSHPQTKQLYLFLDEMATKLKIAGYVPESGEVLLDIDDNED 540
           PGCSS+ELNGTFHQFL+GDRSHPQTKQLYLFLDEMA KLKI+GY+PESGEVLLDIDDNED
Sbjct: 481 PGCSSVELNGTFHQFLIGDRSHPQTKQLYLFLDEMAAKLKISGYIPESGEVLLDIDDNED 540

Query: 541 RETALLKHSEKLAIAFGLMNTAPRTPIRIVKNLRVCGDCHQAIKFISKVYDREIVVRDRI 600
           RETALLKHSEKLAIAFGLMNTAP TPIRIVKNLRVCGDCH AIKFISKVYDREIVVRDRI
Sbjct: 541 RETALLKHSEKLAIAFGLMNTAPGTPIRIVKNLRVCGDCHLAIKFISKVYDREIVVRDRI 600

Query: 601 RYHHFKDGTCSCNDYW 617
           RYHHFKDGTCSCNDYW
Sbjct: 601 RYHHFKDGTCSCNDYW 616

[Close]

BLAST of Lcy03g009460 vs. NCBI nr
Match: XP_022927711.1 (pentatricopeptide repeat-containing protein At3g62890-like [Cucurbita moschata] >XP_022927721.1 pentatricopeptide repeat-containing protein At3g62890-like [Cucurbita moschata])

HSP 1 Score: 1184.1 bits (3062), Expect = 0.0e+00
Identity = 568/616 (92.21%), Postives = 590/616 (95.78%), Query Frame = 0


Query: 1   MIRCDFTSKLFFLLDSCKSIHQIKQTHAQLITTGLILHPIPTNKLIKLLSFSRFASISYA 60
           MIR DFTSKLFFLLD CKSIHQIKQTHAQLITTGL+LHPI TNKL+KLLSFSRFASISYA
Sbjct: 1   MIRYDFTSKLFFLLDFCKSIHQIKQTHAQLITTGLVLHPIATNKLLKLLSFSRFASISYA 60

Query: 61  HMVFDHFPQPDLFLYNTIIKAHALSATSPADSFTRFRSLVRDERLVPNQYSFAFAFKGCG 120
            MVFDHFPQPDLFLYNTIIKAHALSATS ADSFTRFRSL+RD RLVPNQYSFAFAFKGCG
Sbjct: 61  QMVFDHFPQPDLFLYNTIIKAHALSATSSADSFTRFRSLIRDGRLVPNQYSFAFAFKGCG 120

Query: 121 NGVGVLEGEQVRVHAVKLGLENNLFVTNALIGMYVNLGLVGDARKVFDWSPNRDMYSWNI 180
           N VGVLEGEQVR HAVKLGLENNLFV NALIGMYVNLG+VGDARKVFDWS  RDMYSWNI
Sbjct: 121 NAVGVLEGEQVRAHAVKLGLENNLFVMNALIGMYVNLGVVGDARKVFDWSTIRDMYSWNI 180

Query: 181 MLSGYARLGRMDEARELFDEMPERDVVSWTTMIAGCVQVGHFMEALDVFHKMLQRGASPN 240
           MLSGYA+LG+MD+ARELFDEMPERDVVSWTTMIAGCVQVGHFMEALD+FHKMLQ+G  PN
Sbjct: 181 MLSGYAKLGKMDDARELFDEMPERDVVSWTTMIAGCVQVGHFMEALDIFHKMLQKGVGPN 240

Query: 241 EYTLASALAACANLVALDQGRWMHVYIRKKGIQMNERLLAGLIDMYAKCGELEFASKLFN 300
           EYTLASALAACANLVALDQGRWMHVYIRK  I +N+RLLAGLIDMY KCGELEFASKLFN
Sbjct: 241 EYTLASALAACANLVALDQGRWMHVYIRKNEIPLNDRLLAGLIDMYVKCGELEFASKLFN 300

Query: 301 SERQLKRKVWPWNAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVALLNACSHGNRV 360
           SER   RKVWPWNAMIGGFAMHGKSKEAIE+FEQMKVEKVSPNKVTFVALLNACSHGNRV
Sbjct: 301 SERMSIRKVWPWNAMIGGFAMHGKSKEAIELFEQMKVEKVSPNKVTFVALLNACSHGNRV 360

Query: 361 EEGRGYFESMAGHYGVKPELEHYGCMVDLLGRAGRLKEAEEIISNMPLTPDVAIWGALLS 420
           EEGRGYFESMAG +GV+PELEHYGCMVDLLGR+GRLKEAEEIIS+MPL PDVAIWGALLS
Sbjct: 361 EEGRGYFESMAGRFGVEPELEHYGCMVDLLGRSGRLKEAEEIISSMPLAPDVAIWGALLS 420

Query: 421 ACKIHKDIEMGERIGKIVRELDSDHLGCHVLLANIYSLTGNWNEARTLREKIAVSGKKKT 480
           ACK HKDIEMGERIGKIVRELDSDHLGCHVLLAN+YSLTGNWNEARTLREKIAVSGKKKT
Sbjct: 421 ACKTHKDIEMGERIGKIVRELDSDHLGCHVLLANMYSLTGNWNEARTLREKIAVSGKKKT 480

Query: 481 PGCSSIELNGTFHQFLVGDRSHPQTKQLYLFLDEMATKLKIAGYVPESGEVLLDIDDNED 540
           PGCSSIELNGTFHQFLVGDRSHPQTK+LY+FLDEM TKLK+AGY+PESGEVLLDIDDNED
Sbjct: 481 PGCSSIELNGTFHQFLVGDRSHPQTKELYMFLDEMTTKLKMAGYIPESGEVLLDIDDNED 540

Query: 541 RETALLKHSEKLAIAFGLMNTAPRTPIRIVKNLRVCGDCHQAIKFISKVYDREIVVRDRI 600
           RETALLKHSEKLAIAFGLMNTAP+TPIRIVKNLRVCGDCH AIKFISKVYDREIVVRDRI
Sbjct: 541 RETALLKHSEKLAIAFGLMNTAPKTPIRIVKNLRVCGDCHLAIKFISKVYDREIVVRDRI 600

Query: 601 RYHHFKDGTCSCNDYW 617
           RYHHFKDG CSCNDYW
Sbjct: 601 RYHHFKDGACSCNDYW 616

[Close]

BLAST of Lcy03g009460 vs. NCBI nr
Match: XP_023529533.1 (pentatricopeptide repeat-containing protein At3g62890-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1180.6 bits (3053), Expect = 0.0e+00
Identity = 567/616 (92.05%), Postives = 590/616 (95.78%), Query Frame = 0


Query: 1   MIRCDFTSKLFFLLDSCKSIHQIKQTHAQLITTGLILHPIPTNKLIKLLSFSRFASISYA 60
           MIR DFTSKLFFLLD CKSIHQIKQTHAQLITTGL+LHPI TNKL+KLLSFSRFASISYA
Sbjct: 1   MIRYDFTSKLFFLLDFCKSIHQIKQTHAQLITTGLVLHPIATNKLLKLLSFSRFASISYA 60

Query: 61  HMVFDHFPQPDLFLYNTIIKAHALSATSPADSFTRFRSLVRDERLVPNQYSFAFAFKGCG 120
            MVFDHFPQPDLFLYNTIIKAHA+SATS ADSFTRFRSL+RD RLVPNQYSFAFAFKGCG
Sbjct: 61  QMVFDHFPQPDLFLYNTIIKAHAISATSSADSFTRFRSLIRDGRLVPNQYSFAFAFKGCG 120

Query: 121 NGVGVLEGEQVRVHAVKLGLENNLFVTNALIGMYVNLGLVGDARKVFDWSPNRDMYSWNI 180
           N VGVLEGEQVRVHAVKLGLENNLFV NALIGMYVNLG VG ARKVFDWS  RDMYSWNI
Sbjct: 121 NAVGVLEGEQVRVHAVKLGLENNLFVMNALIGMYVNLGFVGYARKVFDWSTIRDMYSWNI 180

Query: 181 MLSGYARLGRMDEARELFDEMPERDVVSWTTMIAGCVQVGHFMEALDVFHKMLQRGASPN 240
           MLSGYA+LG+MD+ARELFDEMPERDVVSWTTMIAGCVQVGHFMEALD+FHKMLQ+G +PN
Sbjct: 181 MLSGYAKLGKMDDARELFDEMPERDVVSWTTMIAGCVQVGHFMEALDIFHKMLQKGVNPN 240

Query: 241 EYTLASALAACANLVALDQGRWMHVYIRKKGIQMNERLLAGLIDMYAKCGELEFASKLFN 300
           EYTLASALAACANLVALDQGRWMHVYIRK  I +N+RLLAGLIDMY KCGELEFASKLFN
Sbjct: 241 EYTLASALAACANLVALDQGRWMHVYIRKNEIPLNDRLLAGLIDMYVKCGELEFASKLFN 300

Query: 301 SERQLKRKVWPWNAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVALLNACSHGNRV 360
           SER   RKVWPWNAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVALLNACSHGNRV
Sbjct: 301 SERMSIRKVWPWNAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVALLNACSHGNRV 360

Query: 361 EEGRGYFESMAGHYGVKPELEHYGCMVDLLGRAGRLKEAEEIISNMPLTPDVAIWGALLS 420
           EEGR YF+SMAG YGV+PELEHYGCMVDLLGR+GRLKEAEEIIS+MP+TPDVAIWGALLS
Sbjct: 361 EEGRRYFKSMAGRYGVEPELEHYGCMVDLLGRSGRLKEAEEIISSMPMTPDVAIWGALLS 420

Query: 421 ACKIHKDIEMGERIGKIVRELDSDHLGCHVLLANIYSLTGNWNEARTLREKIAVSGKKKT 480
           ACK HKDIEMGERIGKIVRELDSDHLGCHVLLAN+YSLTGNWNEARTLREKIAVSGKKKT
Sbjct: 421 ACKTHKDIEMGERIGKIVRELDSDHLGCHVLLANMYSLTGNWNEARTLREKIAVSGKKKT 480

Query: 481 PGCSSIELNGTFHQFLVGDRSHPQTKQLYLFLDEMATKLKIAGYVPESGEVLLDIDDNED 540
           PGCSSIELNGTFHQFLVGDRSHPQTK+LY+FLDEM TKLK+AGY+PESGEVLLDIDDNED
Sbjct: 481 PGCSSIELNGTFHQFLVGDRSHPQTKELYMFLDEMTTKLKMAGYIPESGEVLLDIDDNED 540

Query: 541 RETALLKHSEKLAIAFGLMNTAPRTPIRIVKNLRVCGDCHQAIKFISKVYDREIVVRDRI 600
           RETALLKHSEKLAIAFGLMNTAP+TPIRIVKNLRVCGDCH AIKFISKVYDREIVVRDRI
Sbjct: 541 RETALLKHSEKLAIAFGLMNTAPKTPIRIVKNLRVCGDCHLAIKFISKVYDREIVVRDRI 600

Query: 601 RYHHFKDGTCSCNDYW 617
           RYHHFKDG CSCNDYW
Sbjct: 601 RYHHFKDGACSCNDYW 616

[Close]

BLAST of Lcy03g009460 vs. NCBI nr
Match: XP_022967088.1 (pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita maxima])

HSP 1 Score: 1167.9 bits (3020), Expect = 0.0e+00
Identity = 563/616 (91.40%), Postives = 584/616 (94.81%), Query Frame = 0


Query: 1   MIRCDFTSKLFFLLDSCKSIHQIKQTHAQLITTGLILHPIPTNKLIKLLSFSRFASISYA 60
           MIR DFTSKLFFLLD CKSIHQIKQTHAQLITTGL+LHPI TNKL+KLLSFSRF SISYA
Sbjct: 1   MIRYDFTSKLFFLLDFCKSIHQIKQTHAQLITTGLVLHPIATNKLLKLLSFSRFGSISYA 60

Query: 61  HMVFDHFPQPDLFLYNTIIKAHALSATSPADSFTRFRSLVRDERLVPNQYSFAFAFKGCG 120
            MVFDHFPQPDLFLYNTIIKAHA+SATS ADSFTRFRSL+RD  LVPNQYSFAFAFKGCG
Sbjct: 61  QMVFDHFPQPDLFLYNTIIKAHAISATSSADSFTRFRSLIRDGSLVPNQYSFAFAFKGCG 120

Query: 121 NGVGVLEGEQVRVHAVKLGLENNLFVTNALIGMYVNLGLVGDARKVFDWSPNRDMYSWNI 180
           N VGVLEGEQVRVHAVKLGLENNLFV NALIGMYVNLG VGDARKVFDWS  RDMYSWNI
Sbjct: 121 NAVGVLEGEQVRVHAVKLGLENNLFVMNALIGMYVNLGFVGDARKVFDWSTIRDMYSWNI 180

Query: 181 MLSGYARLGRMDEARELFDEMPERDVVSWTTMIAGCVQVGHFMEALDVFHKMLQRGASPN 240
           MLSGYA+LG+MD+ARELFDEMPERDVVSWTTMIAGCVQVGHFM ALD+FHKMLQ+G   N
Sbjct: 181 MLSGYAKLGKMDDARELFDEMPERDVVSWTTMIAGCVQVGHFMGALDIFHKMLQKGVGLN 240

Query: 241 EYTLASALAACANLVALDQGRWMHVYIRKKGIQMNERLLAGLIDMYAKCGELEFASKLFN 300
           EYTLASALAACANLVALDQGRWMHVYIRK  IQ+N+RLLAGLIDMY KCGELEFA KLFN
Sbjct: 241 EYTLASALAACANLVALDQGRWMHVYIRKNEIQLNDRLLAGLIDMYVKCGELEFALKLFN 300

Query: 301 SERQLKRKVWPWNAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVALLNACSHGNRV 360
           SER   RKVWPWNAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVALLNACSHGNRV
Sbjct: 301 SERMSIRKVWPWNAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVALLNACSHGNRV 360

Query: 361 EEGRGYFESMAGHYGVKPELEHYGCMVDLLGRAGRLKEAEEIISNMPLTPDVAIWGALLS 420
           EEGR YFESMAG YGV+PELEHYGCMVDLLGR+GRLKEAEEIIS+MP+T DVAIWGALLS
Sbjct: 361 EEGRRYFESMAGLYGVEPELEHYGCMVDLLGRSGRLKEAEEIISSMPMTADVAIWGALLS 420

Query: 421 ACKIHKDIEMGERIGKIVRELDSDHLGCHVLLANIYSLTGNWNEARTLREKIAVSGKKKT 480
           ACK HKDIEMGERIGKIV ELDSDHLGCHVLLAN+YSLTGNWNEARTLREKIAVSGKKKT
Sbjct: 421 ACKTHKDIEMGERIGKIVTELDSDHLGCHVLLANMYSLTGNWNEARTLREKIAVSGKKKT 480

Query: 481 PGCSSIELNGTFHQFLVGDRSHPQTKQLYLFLDEMATKLKIAGYVPESGEVLLDIDDNED 540
           PGCSSIELNGTFHQFLVGDRSHPQTK+LY+ LDEM TKLK+AGY+PESGEVLLDIDD+ED
Sbjct: 481 PGCSSIELNGTFHQFLVGDRSHPQTKELYMLLDEMTTKLKMAGYIPESGEVLLDIDDDED 540

Query: 541 RETALLKHSEKLAIAFGLMNTAPRTPIRIVKNLRVCGDCHQAIKFISKVYDREIVVRDRI 600
           RETALLKHSEKLAIAFGLMNTAPRTPIRIVKNLRVCGDCHQAIKFISKVYDREIVVRDRI
Sbjct: 541 RETALLKHSEKLAIAFGLMNTAPRTPIRIVKNLRVCGDCHQAIKFISKVYDREIVVRDRI 600

Query: 601 RYHHFKDGTCSCNDYW 617
           RYHHFKDG CSCNDYW
Sbjct: 601 RYHHFKDGACSCNDYW 616

[Close]

BLAST of Lcy03g009460 vs. NCBI nr
Match: XP_004139110.1 (pentatricopeptide repeat-containing protein At5g66520 [Cucumis sativus] >KGN66465.1 hypothetical protein Csa_007004 [Cucumis sativus])

HSP 1 Score: 1134.4 bits (2933), Expect = 0.0e+00
Identity = 546/616 (88.64%), Postives = 575/616 (93.34%), Query Frame = 0


Query: 1   MIRCDFTSKLFFLLDSCKSIHQIKQTHAQLITTGLILHPIPTNKLIKLLSFSRFASISYA 60
           M+RCD      FLL SCKS  QIKQ HA+LITTGLILHPIPTNKL+K LS S FA ISYA
Sbjct: 1   MVRCD------FLLSSCKSFRQIKQVHARLITTGLILHPIPTNKLLKQLS-SIFAPISYA 60

Query: 61  HMVFDHFPQPDLFLYNTIIKAHALSATSPADSFTRFRSLVRDERLVPNQYSFAFAFKGCG 120
           HMVFDHFPQPDLFLYNTIIK  A S TS ADSFT+FRSL+R+ERLVPNQYSFAFAFKGCG
Sbjct: 61  HMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCG 120

Query: 121 NGVGVLEGEQVRVHAVKLGLENNLFVTNALIGMYVNLGLVGDARKVFDWSPNRDMYSWNI 180
           +GVGVLEGEQVRVHA+KLGLENNLFVTNALIGMYVNL  V DARKVFDWSPNRDMYSWNI
Sbjct: 121 SGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMYSWNI 180

Query: 181 MLSGYARLGRMDEARELFDEMPERDVVSWTTMIAGCVQVGHFMEALDVFHKMLQRGASPN 240
           MLSGYARLG+MDEAR+LFDEMPE+DVVSWTTMI+GC+QVG+FMEALD+FH ML +G SPN
Sbjct: 181 MLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKGMSPN 240

Query: 241 EYTLASALAACANLVALDQGRWMHVYIRKKGIQMNERLLAGLIDMYAKCGELEFASKLFN 300
           EYTLAS+LAACANLVALDQGRWMHVYI+K  IQMNERLLAGLIDMYAKCGELEFASKLFN
Sbjct: 241 EYTLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFN 300

Query: 301 SERQLKRKVWPWNAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVALLNACSHGNRV 360
           S  +LKRKVWPWNAMIGGFA+HGKSKEAIEVFEQMK+EKVSPNKVTFVALLNACSHGNRV
Sbjct: 301 SNPRLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSHGNRV 360

Query: 361 EEGRGYFESMAGHYGVKPELEHYGCMVDLLGRAGRLKEAEEIISNMPLTPDVAIWGALLS 420
           EEGR YFESMA HY VKPELEHYGC+VDLLGRAGRLKEAEEIIS+M LTPDVAIWGALLS
Sbjct: 361 EEGRYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWGALLS 420

Query: 421 ACKIHKDIEMGERIGKIVRELDSDHLGCHVLLANIYSLTGNWNEARTLREKIAVSGKKKT 480
           ACKIHKD EMGER+GKIV+ELD +HLGCHVLLANIYSLTGNWNEARTLREKIA SGKKKT
Sbjct: 421 ACKIHKDAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESGKKKT 480

Query: 481 PGCSSIELNGTFHQFLVGDRSHPQTKQLYLFLDEMATKLKIAGYVPESGEVLLDIDDNED 540
           PGCSSIELNG FHQFLVGDRSHPQTKQLYLFLDEM TKLKIAGY+PESGEVLLDIDDNED
Sbjct: 481 PGCSSIELNGMFHQFLVGDRSHPQTKQLYLFLDEMITKLKIAGYIPESGEVLLDIDDNED 540

Query: 541 RETALLKHSEKLAIAFGLMNTAPRTPIRIVKNLRVCGDCHQAIKFISKVYDREIVVRDRI 600
           RETALLKHSEKLAIAFGLMNT P+TPIRIVKNLRVC DCH AIKFISKVYDREI+VRDRI
Sbjct: 541 RETALLKHSEKLAIAFGLMNTTPKTPIRIVKNLRVCSDCHLAIKFISKVYDREIIVRDRI 600

Query: 601 RYHHFKDGTCSCNDYW 617
           RYHHFKDGTCSCNDYW
Sbjct: 601 RYHHFKDGTCSCNDYW 609

[Close]

BLAST of Lcy03g009460 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 545.8 bits (1405), Expect = 4.4e-155
Identity = 273/604 (45.20%), Postives = 378/604 (62.58%), Query Frame = 0


Query: 14  LDSCKSIHQIKQTHAQLITTGLILHPIPTNKLIKL-LSFSRFASISYAHMVFDHFPQPDL 73
           L  C    ++KQ HA+++ TGL+       K +   +S +    + YA +VFD F +PD 
Sbjct: 21  LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80

Query: 74  FLYNTIIKAHALSATSPADSFTRFRSLVRDERLVPNQYSFAFAFKGCGNGVGVLEGEQVR 133
           FL+N +I+  + S   P  S   ++ ++       N Y+F    K C N     E  Q+ 
Sbjct: 81  FLWNLMIRGFSCS-DEPERSLLLYQRMLCSS-APHNAYTFPSLLKACSNLSAFEETTQIH 140

Query: 134 VHAVKLGLENNLFVTNALIGMYVNLGLVGDARKVFDWSPNRDMYSWNIMLSGYARLGRMD 193
               KLG EN+++  N+LI  Y   G    A  +FD  P  D  SWN ++ GY + G+MD
Sbjct: 141 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 200

Query: 194 EARELFDEMPERDVVSWTTMIAGCVQVGHFMEALDVFHKMLQRGASPNEYTLASALAACA 253
            A  LF +M E++ +SWTTMI+G VQ     EAL +FH+M      P+  +LA+AL+ACA
Sbjct: 201 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 260

Query: 254 NLVALDQGRWMHVYIRKKGIQMNERLLAGLIDMYAKCGELEFASKLFNSERQLKRKVWPW 313
            L AL+QG+W+H Y+ K  I+M+  L   LIDMYAKCGE+E A ++F + +  K+ V  W
Sbjct: 261 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK--KKSVQAW 320

Query: 314 NAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVALLNACSHGNRVEEGRGYFESMAG 373
            A+I G+A HG  +EAI  F +M+   + PN +TF A+L ACS+   VEEG+  F SM  
Sbjct: 321 TALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMER 380

Query: 374 HYGVKPELEHYGCMVDLLGRAGRLKEAEEIISNMPLTPDVAIWGALLSACKIHKDIEMGE 433
            Y +KP +EHYGC+VDLLGRAG L EA+  I  MPL P+  IWGALL AC+IHK+IE+GE
Sbjct: 381 DYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGE 440

Query: 434 RIGKIVRELDSDHLGCHVLLANIYSLTGNWNEARTLREKIAVSGKKKTPGCSSIELNGTF 493
            IG+I+  +D  H G +V  ANI+++   W++A   R  +   G  K PGCS+I L GT 
Sbjct: 441 EIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTT 500

Query: 494 HQFLVGDRSHPQTKQLYLFLDEMATKLKIAGYVPESGEVLLDIDDNEDRETALLKHSEKL 553
           H+FL GDRSHP+ +++      M  KL+  GYVPE  E+LLD+ D+++RE  + +HSEKL
Sbjct: 501 HEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKL 560

Query: 554 AIAFGLMNTAPRTPIRIVKNLRVCGDCHQAIKFISKVYDREIVVRDRIRYHHFKDGTCSC 613
           AI +GL+ T P T IRI+KNLRVC DCH+  K ISK+Y R+IV+RDR R+HHF+DG CSC
Sbjct: 561 AITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSC 620

Query: 614 NDYW 617
            DYW
Sbjct: 621 GDYW 620

[Close]

BLAST of Lcy03g009460 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 539.7 bits (1389), Expect = 3.2e-153
Identity = 279/708 (39.41%), Postives = 407/708 (57.49%), Query Frame = 0


Query: 13  LLDSCKSIHQIKQTHAQLITTGLILHPIPTNKLIKLLSFS-RFASISYAHMVFDHFPQPD 72
           LL +CK++  ++  HAQ+I  GL       +KLI+    S  F  + YA  VF    +P+
Sbjct: 39  LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPN 98

Query: 73  LFLYNTIIKAHALSATSPADSFTRFRSLVRDERLVPNQYSFAFAFKGCGNGVGVLEGEQV 132
           L ++NT+ + HALS + P  +   +  ++    L+PN Y+F F  K C       EG+Q+
Sbjct: 99  LLIWNTMFRGHALS-SDPVSALKLYVCMI-SLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 158

Query: 133 RVHAVKLGLENNLFVTNALIGMYVNLGLVGDARKVFDWSPNRDMYSWNIMLSGYARLGRM 192
             H +KLG + +L+V  +LI MYV  G + DA KVFD SP+RD+ S+  ++ GYA  G +
Sbjct: 159 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 218

Query: 193 DEARELFDEMPERDVVSWTTMIAGCVQVGHFMEALD------------------------ 252
           + A++LFDE+P +DVVSW  MI+G  + G++ EAL+                        
Sbjct: 219 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 278

Query: 253 ------------------------------------------------------------ 312
                                                                       
Sbjct: 279 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 338

Query: 313 -----------------VFHKMLQRGASPNEYTLASALAACANLVALDQGRWMHVYI--R 372
                            +F +ML+ G +PN+ T+ S L ACA+L A+D GRW+HVYI  R
Sbjct: 339 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 398

Query: 373 KKGIQMNERLLAGLIDMYAKCGELEFASKLFNSERQLKRKVWPWNAMIGGFAMHGKSKEA 432
            KG+     L   LIDMYAKCG++E A ++FNS   L + +  WNAMI GFAMHG++  +
Sbjct: 399 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS--ILHKSLSSWNAMIFGFAMHGRADAS 458

Query: 433 IEVFEQMKVEKVSPNKVTFVALLNACSHGNRVEEGRGYFESMAGHYGVKPELEHYGCMVD 492
            ++F +M+   + P+ +TFV LL+ACSH   ++ GR  F +M   Y + P+LEHYGCM+D
Sbjct: 459 FDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMID 518

Query: 493 LLGRAGRLKEAEEIISNMPLTPDVAIWGALLSACKIHKDIEMGERIGKIVRELDSDHLGC 552
           LLG +G  KEAEE+I+ M + PD  IW +LL ACK+H ++E+GE   + + +++ ++ G 
Sbjct: 519 LLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGS 578

Query: 553 HVLLANIYSLTGNWNEARTLREKIAVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKQL 612
           +VLL+NIY+  G WNE    R  +   G KK PGCSSIE++   H+F++GD+ HP+ +++
Sbjct: 579 YVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 638

Query: 613 YLFLDEMATKLKIAGYVPESGEVLLDIDDNEDRETALLKHSEKLAIAFGLMNTAPRTPIR 617
           Y  L+EM   L+ AG+VP++ EVL ++++ E +E AL  HSEKLAIAFGL++T P T + 
Sbjct: 639 YGMLEEMEVLLEKAGFVPDTSEVLQEMEE-EWKEGALRHHSEKLAIAFGLISTKPGTKLT 698

[Close]

BLAST of Lcy03g009460 vs. TAIR 10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 533.5 bits (1373), Expect = 2.3e-151
Identity = 267/626 (42.65%), Postives = 394/626 (62.94%), Query Frame = 0


Query: 8   SKLFFLLDSCKSIHQIKQTHAQLITTGLILHPIPTNKLIKLLSFS--RFASISYAHMVFD 67
           S LF  +++C++I  + Q HA  I +G +   +   ++++  + S      + YAH +F+
Sbjct: 24  SSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFN 83

Query: 68  HFPQPDLFLYNTIIKAHALSATSPA-DSFTRFRSLVRDERLVPNQYSFAFAFKGCGNGVG 127
             PQ + F +NTII+  + S    A  + T F  ++ DE + PN+++F    K C     
Sbjct: 84  QMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGK 143

Query: 128 VLEGEQVRVHAVKLGLENNLFVTNALIGMYVNLGLVGDARKVF--------------DWS 187
           + EG+Q+   A+K G   + FV + L+ MYV  G + DAR +F                 
Sbjct: 144 IQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRK 203

Query: 188 PNRDMYSWNIMLSGYARLGRMDEARELFDEMPERDVVSWTTMIAGCVQVGHFMEALDVFH 247
            + ++  WN+M+ GY RLG    AR LFD+M +R VVSW TMI+G    G F +A++VF 
Sbjct: 204 RDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFR 263

Query: 248 KMLQRGASPNEYTLASALAACANLVALDQGRWMHVYIRKKGIQMNERLLAGLIDMYAKCG 307
           +M +    PN  TL S L A + L +L+ G W+H+Y    GI++++ L + LIDMY+KCG
Sbjct: 264 EMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 323

Query: 308 ELEFASKLFNSERQLKRKVWPWNAMIGGFAMHGKSKEAIEVFEQMKVEKVSPNKVTFVAL 367
            +E A  +F  ER  +  V  W+AMI GFA+HG++ +AI+ F +M+   V P+ V ++ L
Sbjct: 324 IIEKAIHVF--ERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINL 383

Query: 368 LNACSHGNRVEEGRGYFESMAGHYGVKPELEHYGCMVDLLGRAGRLKEAEEIISNMPLTP 427
           L ACSHG  VEEGR YF  M    G++P +EHYGCMVDLLGR+G L EAEE I NMP+ P
Sbjct: 384 LTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKP 443

Query: 428 DVAIWGALLSACKIHKDIEMGERIGKIVRELDSDHLGCHVLLANIYSLTGNWNEARTLRE 487
           D  IW ALL AC++  ++EMG+R+  I+ ++     G +V L+N+Y+  GNW+E   +R 
Sbjct: 444 DDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRL 503

Query: 488 KIAVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKQLYLFLDEMATKLKIAGYVPESGE 547
           ++     +K PGCS I+++G  H+F+V D SHP+ K++   L E++ KL++AGY P + +
Sbjct: 504 RMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQ 563

Query: 548 VLLDIDDNEDRETALLKHSEKLAIAFGLMNTAPRTPIRIVKNLRVCGDCHQAIKFISKVY 607
           VLL++++ ED+E  L  HSEK+A AFGL++T+P  PIRIVKNLR+C DCH +IK ISKVY
Sbjct: 564 VLLNLEE-EDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVY 623

Query: 608 DREIVVRDRIRYHHFKDGTCSCNDYW 617
            R+I VRDR R+HHF+DG+CSC DYW
Sbjct: 624 KRKITVRDRKRFHHFQDGSCSCMDYW 646

[Close]

BLAST of Lcy03g009460 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 527.3 bits (1357), Expect = 1.6e-149
Identity = 279/711 (39.24%), Postives = 396/711 (55.70%), Query Frame = 0


Query: 8   SKLFFLLDSCKSIHQIKQTHAQLITTGLILHPIPTNKLIKLLSFSRFASISYAHMVFDHF 67
           S+   L++ C S+ Q+KQTH  +I TG    P   +KL  + + S FAS+ YA  VFD  
Sbjct: 31  SRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEI 90

Query: 68  PQPDLFLYNTIIKAHALSATSPADSFTRFRSLVRDERLVPNQYSFAFAFK---------- 127
           P+P+ F +NT+I+A+A S   P  S   F  +V + +  PN+Y+F F  K          
Sbjct: 91  PKPNSFAWNTLIRAYA-SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 150

Query: 128 ----------------------------GCG------------------------NG--- 187
                                        CG                        NG   
Sbjct: 151 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 210

Query: 188 --------------------------VGVLE----------GEQVRVHAVKLGLENNLFV 247
                                     VGVL           G QV  +  +  +  NL +
Sbjct: 211 KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTL 270

Query: 248 TNALIGMYVNLGLVGDARKVFDWSPNRDMYSWNIMLSGYARLGRMDEARELFDEMPERDV 307
            NA++ MY   G + DA+++FD    +D  +W  ML GYA     + ARE+ + MP++D+
Sbjct: 271 ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDI 330

Query: 308 VSWTTMIAGCVQVGHFMEALDVFHKM-LQRGASPNEYTLASALAACANLVALDQGRWMHV 367
           V+W  +I+   Q G   EAL VFH++ LQ+    N+ TL S L+ACA + AL+ GRW+H 
Sbjct: 331 VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHS 390

Query: 368 YIRKKGIQMNERLLAGLIDMYAKCGELEFASKLFNSERQLKRKVWPWNAMIGGFAMHGKS 427
           YI+K GI+MN  + + LI MY+KCG+LE + ++FNS    KR V+ W+AMIGG AMHG  
Sbjct: 391 YIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE--KRDVFVWSAMIGGLAMHGCG 450

Query: 428 KEAIEVFEQMKVEKVSPNKVTFVALLNACSHGNRVEEGRGYFESMAGHYGVKPELEHYGC 487
            EA+++F +M+   V PN VTF  +  ACSH   V+E    F  M  +YG+ PE +HY C
Sbjct: 451 NEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC 510

Query: 488 MVDLLGRAGRLKEAEEIISNMPLTPDVAIWGALLSACKIHKDIEMGERIGKIVRELDSDH 547
           +VD+LGR+G L++A + I  MP+ P  ++WGALL ACKIH ++ + E     + EL+  +
Sbjct: 511 IVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRN 570

Query: 548 LGCHVLLANIYSLTGNWNEARTLREKIAVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQT 607
            G HVLL+NIY+  G W     LR+ + V+G KK PGCSSIE++G  H+FL GD +HP +
Sbjct: 571 DGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMS 630

Query: 608 KQLYLFLDEMATKLKIAGYVPESGEVLLDIDDNEDRETALLKHSEKLAIAFGLMNTAPRT 617
           +++Y  L E+  KLK  GY PE  +VL  I++ E +E +L  HSEKLAI +GL++T    
Sbjct: 631 EKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPK 690

[Close]

BLAST of Lcy03g009460 vs. TAIR 10
Match: AT3G62890.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 510.4 bits (1313), Expect = 2.1e-144
Identity = 250/570 (43.86%), Postives = 379/570 (66.49%), Query Frame = 0


Query: 55  ASISYAHMVFD-HFPQPDLFLYNTIIKAHALSATSP-ADSFTRFRSLVRDERLVPNQYSF 114
           A I+YA+ +F     + + FL+N II+A   + +SP   S       +R+ R+ P+ ++F
Sbjct: 6   AIIAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTF 65

Query: 115 AFAFKGCGNGVGVLEGEQVRVHAVKLGLENNLFVTNALIGMYVNLGLVGDARKVFDWSPN 174
            F      N + +  G++     +  GL+ + FV  +L+ MY + G +  A++VFD S +
Sbjct: 66  PFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGS 125

Query: 175 RDMYSWNIMLSGYARLGRMDEARELFDEMPERDVVSWTTMIAGCVQVGHFMEALDVFHKM 234
           +D+ +WN +++ YA+ G +D+AR+LFDEMPER+V+SW+ +I G V  G + EALD+F +M
Sbjct: 126 KDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREM 185

Query: 235 L-----QRGASPNEYTLASALAACANLVALDQGRWMHVYIRKKGIQMNERLLAGLIDMYA 294
                 +    PNE+T+++ L+AC  L AL+QG+W+H YI K  ++++  L   LIDMYA
Sbjct: 186 QLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYA 245

Query: 295 KCGELEFASKLFNSERQLKRKVWPWNAMIGGFAMHGKSKEAIEVFEQMKV-EKVSPNKVT 354
           KCG LE A ++FN+    K+ V  ++AMI   AM+G + E  ++F +M   + ++PN VT
Sbjct: 246 KCGSLERAKRVFNALGS-KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVT 305

Query: 355 FVALLNACSHGNRVEEGRGYFESMAGHYGVKPELEHYGCMVDLLGRAGRLKEAEEIISNM 414
           FV +L AC H   + EG+ YF+ M   +G+ P ++HYGCMVDL GR+G +KEAE  I++M
Sbjct: 306 FVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASM 365

Query: 415 PLTPDVAIWGALLSACKIHKDIEMGERIGKIVRELDSDHLGCHVLLANIYSLTGNWNEAR 474
           P+ PDV IWG+LLS  ++  DI+  E   K + ELD  + G +VLL+N+Y+ TG W E +
Sbjct: 366 PMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVK 425

Query: 475 TLREKIAVSGKKKTPGCSSIELNGTFHQFLVGDRSHPQTKQLYLFLDEMATKLKIAGYVP 534
            +R ++ V G  K PGCS +E+ G  H+F+VGD S  +++++Y  LDE+  +L+ AGYV 
Sbjct: 426 CIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVT 485

Query: 535 ESGEVLLDIDDNEDRETALLKHSEKLAIAFGLMNTAPRTPIRIVKNLRVCGDCHQAIKFI 594
           ++ EVLLD+++ +D+E AL  HSEKLAIAF LM T P TP+RI+KNLR+CGDCH  +K I
Sbjct: 486 DTKEVLLDLNE-KDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMI 545

Query: 595 SKVYDREIVVRDRIRYHHFKDGTCSCNDYW 617
           SK++ REIVVRD  R+HHF+DG+CSC D+W
Sbjct: 546 SKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573

The following BLAST results are available for this feature:

BLAST of Lcy03g009460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJY7	6.2e-154	45.20	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]
Q9LN01	4.4e-152	39.41	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9FI80	3.2e-150	42.65	Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX...	[more]
O82380	2.3e-148	39.24	Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop...	[more]
Q683I9	2.9e-143	43.86	Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX...	[more]

BLAST of Lcy03g009460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EIF4	0.0e+00	92.21	pentatricopeptide repeat-containing protein At3g62890-like OS=Cucurbita moschata...	[more]
A0A6J1HU41	0.0e+00	91.40	pentatricopeptide repeat-containing protein At5g66520-like OS=Cucurbita maxima O...	[more]
A0A0A0LX83	0.0e+00	88.64	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G6128...	[more]
A0A1S3BNM1	0.0e+00	88.47	pentatricopeptide repeat-containing protein At5g66520-like OS=Cucumis melo OX=36...	[more]
A0A5D3D5I7	2.0e-304	90.45	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Lcy03g009460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878435.1	0.0e+00	91.88	pentatricopeptide repeat-containing protein At5g66520-like [Benincasa hispida]	[more]
XP_022927711.1	0.0e+00	92.21	pentatricopeptide repeat-containing protein At3g62890-like [Cucurbita moschata] ...	[more]
XP_023529533.1	0.0e+00	92.05	pentatricopeptide repeat-containing protein At3g62890-like [Cucurbita pepo subsp...	[more]
XP_022967088.1	0.0e+00	91.40	pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita maxima]	[more]
XP_004139110.1	0.0e+00	88.64	pentatricopeptide repeat-containing protein At5g66520 [Cucumis sativus] >KGN6646...	[more]

BLAST of Lcy03g009460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66520.1	4.4e-155	45.20	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G08070.1	3.2e-153	39.41	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G48910.1	2.3e-151	42.65	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G29760.1	1.6e-149	39.24	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G62890.1	2.1e-144	43.86	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 312..343 e-value: 1.6E-7 score: 29.0 coord: 207..241 e-value: 5.8E-9 score: 33.6 coord: 176..207 e-value: 5.6E-10 score: 36.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 204..252 e-value: 4.6E-12 score: 45.9 coord: 312..355 e-value: 4.1E-12 score: 46.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 148..168 e-value: 1.4 score: 9.3 coord: 382..406 e-value: 0.021 score: 15.1 coord: 282..300 e-value: 0.47 score: 10.8
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 173..201 e-value: 9.8E-8 score: 31.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 174..208 score: 13.59207
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 308..342 score: 10.98328
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 209..239 score: 9.010246
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 282..504 e-value: 4.1E-39 score: 136.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 172..278 e-value: 4.0E-27 score: 97.4 coord: 13..171 e-value: 2.6E-9 score: 39.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 185..470
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 481..606 e-value: 5.0E-39 score: 133.1
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 17..590
None	No IPR available	PANTHER	PTHR47928:SF65	TRANSCRIPT PROCESSING PROTEIN, PUTATIVE-RELATED	coord: 17..590

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g009460.1	Lcy03g009460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900865	chloroplast RNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding