Lcy03g009330 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g009330
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	PRELI/MSF1 domain-containing protein
Location	Chr03: 42315697 .. 42318249 (+)
RNA-Seq Expression	Lcy03g009330
Synteny	Lcy03g009330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAAATGGAGCTTTGGGGCCTGGGTTTATGGGGATTGGATTTACAGTTTGATGTCTTGTCTTTAGCTGCAATGGCGAAGGGCAGTTTCGTCAGAAAACTCCGCCTCTATTTAACCACGATTCGGTCCAAATGAATTGGTCTTTCCCTTGCTGAAGCTCTGGTTTACCCAAATTTTCTTTCCTTTTCTGTGAGTTTTTGATTTTGAGGTTGAGATCTTGACCCATCGGAACCGCCTTCTTCCGCCGCCTGCAAATCCCATCTTCTTTCATCTCTCAGGTGAGCCTTTTCTTTCCTTAGCTCTTCTTTTCACATGGGTTTCGTTTTGTTTCCATTTTGCTAGGCTCTTCTTCTTTAGGGGTTCTGTTTTTTTCACCTTTATGCTACTGTAATTGCACTATCTGCTGGATTTCTGTGTAAGCTGTGGGGATTGTGATTGAGAAATGCATCCAAAATTGTTTAAATTCCAAACTAGCTGCTCTACATGCCTGTATAAAGTGACCCAGTTGTTTGAAGAAGGTAAGGTTATGGGAAATGATTTGAAGAAGCTTATGTTTTACTGCCAGTTATTTTGATGGATCATTGTTTGTAATGATGGGCCTCAATTTTCTTTTTGGGAAGTGCAACCCTTTAGCTCCAGTGTATTTGGTTTGACCTTGTTGAAACTGCTTCTTCTTTTTCATTTTTCCTACTTTAGTTTTTGTTATCACAGTTTGCTCTCTTCTGCTGGCCAGATGGAGTTTGGAAGCTGTCTTGTGTTAAACTACCCTTAAAAGTCGAAGCTAAGTTGATATGTTATGGGATATTTGTACGAGGTCCAACAAACAATTAGCAATGTTGATTAGGGAGAAAATGACATTATAGGAGCTTGAGCATTATGGTACTGTGTTAAATAAAAAATCTAGAAGTTTAAACCGATAGATTACGGTATATTTGACCTGTTATCATGTTATGCATATTCTTAATTCTTAGCATCTTGCAGCTTAGATTCCAAAACTATTGTCATGAGTTACTGTGGAGGTTTTTGTTCTGTTGTTTGAAGAATGGGAGAACACTGCCAATGCGAGCTTAGCTCAGTGGTAATTGGCATGTATCCTCGACCATGAGGTCAGAGGTTCGAATCCCCCACTCCCAAATGTTGATGTACTCAAAAAAAAAAAAAAAAAAAGAATGGGAGAACACTCTTGTCCATTTTATGATTTGGGAACAATTCATTTGGTACTCAACAGTCAACTCTTTCTCTAAAAACAAGAATTACTCGATTGAATTTATTGGAAAAATAGGTGAAAGAACTGCATAAATAGTTGTTTCTCTTTATTTATCTAGGTCAATTTGATTTTCAGAAGCAACTCCTGCCTTAAGAATATGTGAAGAAGGTTAGACTTCAGTTTGCGGATCAAATTTCTTCTTGTAAATGAAATATTATGAAGAATTCTTGGGTTAGGCAGGACCTATCGACTTGATAAAACAAACTTTTGCTGTTCCCTATCTGATTTGATGTATGCACATGTGATGCTCTAGTTCTTTGTTTTTCACGTAGTTGTTGTCTTAGATGATGGATAATGTTTTCTGTCTGTGTTACATGTGCTCTCTCTTTTCCTAATTGTATCTTCTGGTACGTATCCATCATCTTCCTTGACGTTTTTATTTTTTCTTTTCAATTCCTTTTGTTCTGAATCGGTAGGTGTACGATTGATTTAGCGGTCTCTTCATATGCAGACTAGTTAACTGTGCCATAAGAGGGTGAAGATATCTGAGAATAGTGTGATGGTTAAAGCATACTCTCAGGAGTACACTTACAAACACCCGTGGGAACGGGTAACTTCTGCATCTTGGCGTAAATTTGCCGACCCTGAAAACAAACGTACGTTGTCCCATATTCTTGAAGTTGATACCTTAAACAGAAAGGTTGACCCCGAATCTGGGAAGCTATATACAACCCGTGCTATTACCATCCATGCCCCTGGACCATGGTTTGTTCGAAAAATTGTTGGTCAAGATATCTGCCATTGTGTCGAATCCACGATTGTAGATGCTCGGTCGCAATCAATGCAACTCACCACTCGGAATATCAGTCTCCAGAAGTTCATAGAAGTGGTGGAGAAGATCAGGTATGAACCTCACCCAGATAATCCAAACGGATGGACGATTTGCAAACAGGAGACCAGTATTCGCATCAAGCCATTGTCAGCACTGGCATCGATGGCCGAAAAAGTGGAGCAACGGTGTGCGGAGAGGTTCGTGCAAAACAGTGCCAAGGGTAGAGAAGTGATGGAGAGGATTTGTAAGTATCTCGAAGCTGAATCTAGCGGACTCAGAATCTAACTTTTACTTCCTCTTGTGGATCATGTATCGGTTCTGAGGGATCGGTGAGACCGTTGTCTGTTGTCTGTTTTCTGAGCTGTTTGTAACAAAATAATTCTCATGGAGAAACAGACAGCCTCATGTTATAGGATTCTCCCCAAATTTTAACAAGCTGAGATTTAATTATAGAGCATCATGTTCCATTGCAGTTCCCTGTCATCTTTAATTTTGGCTATGGAAATGCATTTCCT

mRNA sequence

TGAAAATGGAGCTTTGGGGCCTGGGTTTATGGGGATTGGATTTACAGTTTGATGTCTTGTCTTTAGCTGCAATGGCGAAGGGCAGTTTCGTCAGAAAACTCCGCCTCTATTTAACCACGATTCGGTCCAAATGAATTGGTCTTTCCCTTGCTGAAGCTCTGGTTTACCCAAATTTTCTTTCCTTTTCTGTGAGTTTTTGATTTTGAGGTTGAGATCTTGACCCATCGGAACCGCCTTCTTCCGCCGCCTGCAAATCCCATCTTCTTTCATCTCTCAGACTAGTTAACTGTGCCATAAGAGGGTGAAGATATCTGAGAATAGTGTGATGGTTAAAGCATACTCTCAGGAGTACACTTACAAACACCCGTGGGAACGGGTAACTTCTGCATCTTGGCGTAAATTTGCCGACCCTGAAAACAAACGTACGTTGTCCCATATTCTTGAAGTTGATACCTTAAACAGAAAGGTTGACCCCGAATCTGGGAAGCTATATACAACCCGTGCTATTACCATCCATGCCCCTGGACCATGGTTTGTTCGAAAAATTGTTGGTCAAGATATCTGCCATTGTGTCGAATCCACGATTGTAGATGCTCGGTCGCAATCAATGCAACTCACCACTCGGAATATCAGTCTCCAGAAGTTCATAGAAGTGGTGGAGAAGATCAGGTATGAACCTCACCCAGATAATCCAAACGGATGGACGATTTGCAAACAGGAGACCAGTATTCGCATCAAGCCATTGTCAGCACTGGCATCGATGGCCGAAAAAGTGGAGCAACGGTGTGCGGAGAGGTTCGTGCAAAACAGTGCCAAGGGTAGAGAAGTGATGGAGAGGATTTGTAAGTATCTCGAAGCTGAATCTAGCGGACTCAGAATCTAACTTTTACTTCCTCTTGTGGATCATGTATCGGTTCTGAGGGATCGGTGAGACCGTTGTCTGTTGTCTGTTTTCTGAGCTGTTTGTAACAAAATAATTCTCATGGAGAAACAGACAGCCTCATGTTATAGGATTCTCCCCAAATTTTAACAAGCTGAGATTTAATTATAGAGCATCATGTTCCATTGCAGTTCCCTGTCATCTTTAATTTTGGCTATGGAAATGCATTTCCT

Coding sequence (CDS)

ATGGTTAAAGCATACTCTCAGGAGTACACTTACAAACACCCGTGGGAACGGGTAACTTCTGCATCTTGGCGTAAATTTGCCGACCCTGAAAACAAACGTACGTTGTCCCATATTCTTGAAGTTGATACCTTAAACAGAAAGGTTGACCCCGAATCTGGGAAGCTATATACAACCCGTGCTATTACCATCCATGCCCCTGGACCATGGTTTGTTCGAAAAATTGTTGGTCAAGATATCTGCCATTGTGTCGAATCCACGATTGTAGATGCTCGGTCGCAATCAATGCAACTCACCACTCGGAATATCAGTCTCCAGAAGTTCATAGAAGTGGTGGAGAAGATCAGGTATGAACCTCACCCAGATAATCCAAACGGATGGACGATTTGCAAACAGGAGACCAGTATTCGCATCAAGCCATTGTCAGCACTGGCATCGATGGCCGAAAAAGTGGAGCAACGGTGTGCGGAGAGGTTCGTGCAAAACAGTGCCAAGGGTAGAGAAGTGATGGAGAGGATTTGTAAGTATCTCGAAGCTGAATCTAGCGGACTCAGAATCTAA

Protein sequence

MVKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRAITIHAPGPWFVRKIVGQDICHCVESTIVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHPDNPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAESSGLRI

Homology

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BLAST of Lcy03g009330 vs. ExPASy Swiss-Prot
Match: Q54G07 (Protein slowmo homolog OS=Dictyostelium discoideum OX=44689 GN=slmo PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 9.0e-24
Identity = 59/163 (36.20%), Postives = 94/163 (57.67%), Query Frame = 0


Query: 8   EYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRAITIHAPG 67
           ++TYKH W   ++AS+RK+  PE       IL +D L++++DP +G L  T+ I      
Sbjct: 8   KHTYKHLWSDASTASFRKYPSPER----PDILSIDILSKEIDPTTGVLKCTKLIICKGNT 67

Query: 68  PWFVRKIVGQDICHCVESTIVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHPDNPNGWT 127
           P +++ I+G   C   E T VD +++ M L T+N++    + V E   YE HPDN   WT
Sbjct: 68  PSWLKSILGSGECLFYEETTVDPKNKIMTLKTKNLNFTNILGVDEVCTYEQHPDNEE-WT 127

Query: 128 ICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVME 171
           +  QE ++     S++  +A K+E  C +RFV N+ KGR++ME
Sbjct: 128 LFTQEATV----TSSIFGVARKMEAFCLDRFVANAGKGRKIME 161

[Close]

BLAST of Lcy03g009330 vs. ExPASy Swiss-Prot
Match: Q6TMK8 (PRELI domain containing protein 3B OS=Cricetulus griseus OX=10029 GN=PRELID3B PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.7e-20
Identity = 61/184 (33.15%), Postives = 102/184 (55.43%), Query Frame = 0


Query: 2   VKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRAI 61
           +K ++ E+ + HPWE VT+A+ +K+ +P N      ++ VD L+R VDP SGKL++ R +
Sbjct: 1   MKIWTSEHVFDHPWEMVTTAAMQKYPNPMN----PSVVGVDVLDRHVDP-SGKLHSHRLL 60

Query: 62  TIHAPGPWFVRKIVG--QDICHCVESTIVDARSQSMQLTTRNISLQKFIEVVEKIRYEPH 121
           +     P  V+ ++G  +   +  E ++VD   ++M+L + NIS    + V E++ Y+PH
Sbjct: 61  STEWGLPSIVKSLIGAARTKTYVQEHSVVDPVKKTMELKSTNISFTNMVSVDERLTYKPH 120

Query: 122 PDNPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAE 181
           P +P   T+  QE  I +K +    S++  +E   A     N+ KGRE ME +   L AE
Sbjct: 121 PQDPEK-TVLTQEAIITVKGV----SLSSYLEGLMASTISSNANKGREAMEWVIHKLNAE 174

Query: 182 SSGL 184
              L
Sbjct: 181 IEDL 174

[Close]

BLAST of Lcy03g009330 vs. ExPASy Swiss-Prot
Match: Q4R5S9 (PRELI domain containing protein 3B OS=Macaca fascicularis OX=9541 GN=PRELID3B PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.7e-20
Identity = 60/180 (33.33%), Postives = 103/180 (57.22%), Query Frame = 0


Query: 2   VKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRAI 61
           +K ++ E+ + HPWE VT+A+ +K+ +P N      ++ VD L+R +DP SGKL++ R +
Sbjct: 1   MKIWTSEHVFDHPWETVTTAAMQKYPNPMN----PSVVGVDVLDRHIDP-SGKLHSHRLL 60

Query: 62  TIHAPGPWFVRKIVG--QDICHCVESTIVDARSQSMQLTTRNISLQKFIEVVEKIRYEPH 121
           +     P  V+ ++G  +   +  E ++VD   ++M+L + NIS    + V E++ Y+PH
Sbjct: 61  STEWGLPSIVKSLIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPH 120

Query: 122 PDNPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAE 180
           P +P+  TI  QE  I +K +    S++  +E   A     N++KGRE ME +   L AE
Sbjct: 121 PQDPDK-TILTQEAIITVKGV----SLSSYLEGLMASTISSNASKGREAMEWVIHKLNAE 170

[Close]

BLAST of Lcy03g009330 vs. ExPASy Swiss-Prot
Match: Q9Y3B1 (PRELI domain containing protein 3B OS=Homo sapiens OX=9606 GN=PRELID3B PE=1 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 4.6e-20
Identity = 59/180 (32.78%), Postives = 102/180 (56.67%), Query Frame = 0


Query: 2   VKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRAI 61
           +K ++ E+ + HPWE VT+A+ +K+ +P N      ++ VD L+R +DP SGKL++ R +
Sbjct: 1   MKIWTSEHVFDHPWETVTTAAMQKYPNPMN----PSVVGVDVLDRHIDP-SGKLHSHRLL 60

Query: 62  TIHAPGPWFVRKIVG--QDICHCVESTIVDARSQSMQLTTRNISLQKFIEVVEKIRYEPH 121
           +     P  V+ ++G  +   +  E ++VD   ++M+L + NIS    + V E++ Y+PH
Sbjct: 61  STEWGLPSIVKSLIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPH 120

Query: 122 PDNPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAE 180
           P +P   T+  QE  I +K +    S++  +E   A     N++KGRE ME +   L AE
Sbjct: 121 PQDPEK-TVLTQEAIITVKGV----SLSSYLEGLMASTISSNASKGREAMEWVIHKLNAE 170

[Close]

BLAST of Lcy03g009330 vs. ExPASy Swiss-Prot
Match: Q58DB0 (PRELI domain containing protein 3B OS=Bos taurus OX=9913 GN=PRELID3B PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.0e-20
Identity = 61/180 (33.89%), Postives = 100/180 (55.56%), Query Frame = 0


Query: 2   VKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRAI 61
           +K ++ E+ + HPWE VT+A+ +K+ +P N      ++ VD L+R +DP SGKL++ R +
Sbjct: 1   MKIWTSEHVFDHPWETVTTAAMQKYPNPMN----PSVVGVDVLDRHIDP-SGKLHSHRLL 60

Query: 62  TIHAPGPWFVRKIVG--QDICHCVESTIVDARSQSMQLTTRNISLQKFIEVVEKIRYEPH 121
           +     P  V+ I+G  +   +  E ++VD   ++M+L + NIS    + V E++ Y+PH
Sbjct: 61  STEWGLPSIVKSIIGAARTKTYVQEHSVVDPVEKTMELKSTNISFTNMVSVDERLIYKPH 120

Query: 122 PDNPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAE 180
           P +P   TI  QE  I +K +    S+   +E   A     N+ KGRE ME +   L AE
Sbjct: 121 PQDPEK-TILTQEAIITVKGV----SLGSYLEGLMASTISSNANKGREAMEWVIHKLNAE 170

[Close]

BLAST of Lcy03g009330 vs. ExPASy TrEMBL
Match: A0A5D3D5P3 (Protein slowmo-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00340 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.5e-98
Identity = 179/185 (96.76%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MVKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MVKAYSQEYTYKHPWERVT ASWRKFADPENKRTLSHILEVDTLNRKVD ESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60

Query: 61  ITIHAPGPWFVRKIVGQDICHCVESTIVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120
           ITIHAPGPWFVRKIVGQDICHCVEST+VDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 121 DNPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180
           +NPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGLRI 186
           SG  I
Sbjct: 181 SGFAI 185

[Close]

BLAST of Lcy03g009330 vs. ExPASy TrEMBL
Match: A0A1S3BPV8 (protein slowmo homolog OS=Cucumis melo OX=3656 GN=LOC103492037 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.5e-98
Identity = 179/185 (96.76%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MVKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MVKAYSQEYTYKHPWERVT ASWRKFADPENKRTLSHILEVDTLNRKVD ESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60

Query: 61  ITIHAPGPWFVRKIVGQDICHCVESTIVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120
           ITIHAPGPWFVRKIVGQDICHCVEST+VDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 121 DNPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180
           +NPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGLRI 186
           SG  I
Sbjct: 181 SGFAI 185

[Close]

BLAST of Lcy03g009330 vs. ExPASy TrEMBL
Match: A0A0A0LXA5 (PRELI/MSF1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G613520 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 9.8e-98
Identity = 177/185 (95.68%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MVKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MVKAYSQEYTYKHPWERVT ASWRKFADPENKRTLSHILEVDTLNRKVD ESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60

Query: 61  ITIHAPGPWFVRKIVGQDICHCVESTIVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120
           ITIHAPGPWFVRKIVGQDICHCVEST+VDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 121 DNPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180
           +NPNGWTICKQETSI+IKPLSALASMAEKVEQRCAE+FVQNSAKGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGLRI 186
           SG  I
Sbjct: 181 SGFAI 185

[Close]

BLAST of Lcy03g009330 vs. ExPASy TrEMBL
Match: A0A6J1DMT6 (protein slowmo homolog OS=Momordica charantia OX=3673 GN=LOC111021459 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.3e-97
Identity = 174/185 (94.05%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MVKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MVKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60

Query: 61  ITIHAPGPWFVRKIVGQDICHCVESTIVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120
           ITIHAPGPWFVRKIVGQDICHC+ES++VDA+SQSMQL+TRNISLQ+FIEVVEKIRY+PHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCIESSMVDAQSQSMQLSTRNISLQRFIEVVEKIRYDPHP 120

Query: 121 DNPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180
           DNPNGWTIC+QETSIRIKPLSALASMAEKVEQRCAE+FVQNSAKGREVMERICKYLEAES
Sbjct: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGLRI 186
           SG+ I
Sbjct: 181 SGITI 185

[Close]

BLAST of Lcy03g009330 vs. ExPASy TrEMBL
Match: A0A6J1JKY7 (protein slowmo homolog OS=Cucurbita maxima OX=3661 GN=LOC111485522 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.2e-97
Identity = 175/185 (94.59%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MVKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MV+AYSQEYTYKHPWERVT ASWRKF DPENKRTLSHILEVDTLNRKVDPESGKLYTTRA
Sbjct: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60

Query: 61  ITIHAPGPWFVRKIVGQDICHCVESTIVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120
           ITIHAPGPWF+RKIVGQDICHCVEST+VDA SQSMQLTTRNISLQKFIEVVEKIRY+PHP
Sbjct: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120

Query: 121 DNPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180
           DNPNGWTIC+QETSIRIKPLSALASMAEKVEQRCAERFVQNS KGREVMERICKYLEAES
Sbjct: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180

Query: 181 SGLRI 186
           SGL I
Sbjct: 181 SGLTI 185

[Close]

BLAST of Lcy03g009330 vs. NCBI nr
Match: XP_008450435.1 (PREDICTED: protein slowmo homolog [Cucumis melo] >TYK18842.1 protein slowmo-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 368.6 bits (945), Expect = 3.1e-98
Identity = 179/185 (96.76%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MVKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MVKAYSQEYTYKHPWERVT ASWRKFADPENKRTLSHILEVDTLNRKVD ESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60

Query: 61  ITIHAPGPWFVRKIVGQDICHCVESTIVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120
           ITIHAPGPWFVRKIVGQDICHCVEST+VDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 121 DNPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180
           +NPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGLRI 186
           SG  I
Sbjct: 181 SGFAI 185

[Close]

BLAST of Lcy03g009330 vs. NCBI nr
Match: XP_038880305.1 (protein slowmo homolog [Benincasa hispida] >XP_038880306.1 protein slowmo homolog [Benincasa hispida])

HSP 1 Score: 367.1 bits (941), Expect = 9.0e-98
Identity = 177/185 (95.68%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MVKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MVKAYSQEYTYKHPW+RVT ASWRKFADPENKR LSHILEVDTLNRKVDPESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWDRVTCASWRKFADPENKRILSHILEVDTLNRKVDPESGKLYTTRA 60

Query: 61  ITIHAPGPWFVRKIVGQDICHCVESTIVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120
           ITIHAPGPWFVRKIVGQDICHCVEST+VDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 121 DNPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180
           +NPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGLRI 186
           +G  I
Sbjct: 181 NGFTI 185

[Close]

BLAST of Lcy03g009330 vs. NCBI nr
Match: XP_011660128.1 (protein slowmo homolog [Cucumis sativus] >XP_011660129.1 protein slowmo homolog [Cucumis sativus] >XP_011660130.1 protein slowmo homolog [Cucumis sativus] >XP_011660131.1 protein slowmo homolog [Cucumis sativus] >XP_031735993.1 protein slowmo homolog [Cucumis sativus] >XP_031735994.1 protein slowmo homolog [Cucumis sativus] >KGN66480.1 hypothetical protein Csa_007515 [Cucumis sativus])

HSP 1 Score: 365.9 bits (938), Expect = 2.0e-97
Identity = 177/185 (95.68%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 1   MVKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MVKAYSQEYTYKHPWERVT ASWRKFADPENKRTLSHILEVDTLNRKVD ESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTCASWRKFADPENKRTLSHILEVDTLNRKVDAESGKLYTTRA 60

Query: 61  ITIHAPGPWFVRKIVGQDICHCVESTIVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120
           ITIHAPGPWFVRKIVGQDICHCVEST+VDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCVESTVVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120

Query: 121 DNPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180
           +NPNGWTICKQETSI+IKPLSALASMAEKVEQRCAE+FVQNSAKGREVMERICKYLEAES
Sbjct: 121 ENPNGWTICKQETSIQIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGLRI 186
           SG  I
Sbjct: 181 SGFAI 185

[Close]

BLAST of Lcy03g009330 vs. NCBI nr
Match: XP_022154131.1 (protein slowmo homolog [Momordica charantia])

HSP 1 Score: 365.5 bits (937), Expect = 2.6e-97
Identity = 174/185 (94.05%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MVKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MVKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA
Sbjct: 1   MVKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60

Query: 61  ITIHAPGPWFVRKIVGQDICHCVESTIVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120
           ITIHAPGPWFVRKIVGQDICHC+ES++VDA+SQSMQL+TRNISLQ+FIEVVEKIRY+PHP
Sbjct: 61  ITIHAPGPWFVRKIVGQDICHCIESSMVDAQSQSMQLSTRNISLQRFIEVVEKIRYDPHP 120

Query: 121 DNPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180
           DNPNGWTIC+QETSIRIKPLSALASMAEKVEQRCAE+FVQNSAKGREVMERICKYLEAES
Sbjct: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAEKFVQNSAKGREVMERICKYLEAES 180

Query: 181 SGLRI 186
           SG+ I
Sbjct: 181 SGITI 185

[Close]

BLAST of Lcy03g009330 vs. NCBI nr
Match: XP_022960775.1 (protein slowmo homolog [Cucurbita moschata] >XP_022988219.1 protein slowmo homolog [Cucurbita maxima] >XP_023516290.1 protein slowmo homolog [Cucurbita pepo subsp. pepo] >KAG7023860.1 Protein slowmo-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 364.8 bits (935), Expect = 4.5e-97
Identity = 175/185 (94.59%), Postives = 180/185 (97.30%), Query Frame = 0


Query: 1   MVKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MV+AYSQEYTYKHPWERVT ASWRKF DPENKRTLSHILEVDTLNRKVDPESGKLYTTRA
Sbjct: 1   MVRAYSQEYTYKHPWERVTCASWRKFTDPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60

Query: 61  ITIHAPGPWFVRKIVGQDICHCVESTIVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120
           ITIHAPGPWF+RKIVGQDICHCVEST+VDA SQSMQLTTRNISLQKFIEVVEKIRY+PHP
Sbjct: 61  ITIHAPGPWFIRKIVGQDICHCVESTVVDAWSQSMQLTTRNISLQKFIEVVEKIRYDPHP 120

Query: 121 DNPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180
           DNPNGWTIC+QETSIRIKPLSALASMAEKVEQRCAERFVQNS KGREVMERICKYLEAES
Sbjct: 121 DNPNGWTICRQETSIRIKPLSALASMAEKVEQRCAERFVQNSVKGREVMERICKYLEAES 180

Query: 181 SGLRI 186
           SGL I
Sbjct: 181 SGLTI 185

[Close]

BLAST of Lcy03g009330 vs. TAIR 10
Match: AT5G13070.1 (MSF1-like family protein )

HSP 1 Score: 324.7 bits (831), Expect = 4.8e-89
Identity = 148/181 (81.77%), Postives = 172/181 (95.03%), Query Frame = 0


Query: 1   MVKAYSQEYTYKHPWERVTSASWRKFADPENKRTLSHILEVDTLNRKVDPESGKLYTTRA 60
           MVKAY QE+ YKHPWERV++ASWRKFADPENKR LSHILEVDTLNRK+D E+GKL+TTRA
Sbjct: 1   MVKAYRQEHVYKHPWERVSAASWRKFADPENKRILSHILEVDTLNRKLDTETGKLHTTRA 60

Query: 61  ITIHAPGPWFVRKIVGQDICHCVESTIVDARSQSMQLTTRNISLQKFIEVVEKIRYEPHP 120
           +TIHAPGPWF+ +I+GQDICHCVEST+VD +S+SMQLTT+NISL+KFIEV E+IRY+PHP
Sbjct: 61  LTIHAPGPWFLHRIIGQDICHCVESTVVDGKSRSMQLTTKNISLKKFIEVEERIRYDPHP 120

Query: 121 DNPNGWTICKQETSIRIKPLSALASMAEKVEQRCAERFVQNSAKGREVMERICKYLEAES 180
           DNP+ WT+C QETSIRIKPLSALASMAEKVEQ+CAE+F+QNSAKGREVMERICKY+EAES
Sbjct: 121 DNPSAWTVCSQETSIRIKPLSALASMAEKVEQKCAEKFMQNSAKGREVMERICKYMEAES 180

Query: 181 S 182
           +
Sbjct: 181 A 181

The following BLAST results are available for this feature:

BLAST of Lcy03g009330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54G07	9.0e-24	36.20	Protein slowmo homolog OS=Dictyostelium discoideum OX=44689 GN=slmo PE=3 SV=1	[more]
Q6TMK8	2.7e-20	33.15	PRELI domain containing protein 3B OS=Cricetulus griseus OX=10029 GN=PRELID3B PE...	[more]
Q4R5S9	2.7e-20	33.33	PRELI domain containing protein 3B OS=Macaca fascicularis OX=9541 GN=PRELID3B PE...	[more]
Q9Y3B1	4.6e-20	32.78	PRELI domain containing protein 3B OS=Homo sapiens OX=9606 GN=PRELID3B PE=1 SV=2	[more]
Q58DB0	6.0e-20	33.89	PRELI domain containing protein 3B OS=Bos taurus OX=9913 GN=PRELID3B PE=2 SV=1	[more]

BLAST of Lcy03g009330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D5P3	1.5e-98	96.76	Protein slowmo-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BPV8	1.5e-98	96.76	protein slowmo homolog OS=Cucumis melo OX=3656 GN=LOC103492037 PE=4 SV=1	[more]
A0A0A0LXA5	9.8e-98	95.68	PRELI/MSF1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G613520 ...	[more]
A0A6J1DMT6	1.3e-97	94.05	protein slowmo homolog OS=Momordica charantia OX=3673 GN=LOC111021459 PE=4 SV=1	[more]
A0A6J1JKY7	2.2e-97	94.59	protein slowmo homolog OS=Cucurbita maxima OX=3661 GN=LOC111485522 PE=4 SV=1	[more]

BLAST of Lcy03g009330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450435.1	3.1e-98	96.76	PREDICTED: protein slowmo homolog [Cucumis melo] >TYK18842.1 protein slowmo-like...	[more]
XP_038880305.1	9.0e-98	95.68	protein slowmo homolog [Benincasa hispida] >XP_038880306.1 protein slowmo homolo...	[more]
XP_011660128.1	2.0e-97	95.68	protein slowmo homolog [Cucumis sativus] >XP_011660129.1 protein slowmo homolog ...	[more]
XP_022154131.1	2.6e-97	94.05	protein slowmo homolog [Momordica charantia]	[more]
XP_022960775.1	4.5e-97	94.59	protein slowmo homolog [Cucurbita moschata] >XP_022988219.1 protein slowmo homol...	[more]

BLAST of Lcy03g009330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13070.1	4.8e-89	81.77	MSF1-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006797	PRELI/MSF1 domain	PFAM	PF04707	PRELI	coord: 16..178 e-value: 8.9E-49 score: 165.3
IPR006797	PRELI/MSF1 domain	PROSITE	PS50904	PRELI_MSF1	coord: 2..181 score: 43.439178
None	No IPR available	PANTHER	PTHR11158:SF34	PRELI DOMAIN CONTAINING PROTEIN 3A-LIKE ISOFORM X1	coord: 1..182
IPR037365	Slowmo/Ups family	PANTHER	PTHR11158	MSF1/PX19 RELATED	coord: 1..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g009330.1	Lcy03g009330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0120009	intermembrane lipid transfer
biological_process	GO:0015914	phospholipid transport
cellular_component	GO:0005758	mitochondrial intermembrane space
molecular_function	GO:1990050	phosphatidic acid transfer activity