Lcy03g009280 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g009280
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	chaperonin-like RbcX protein 2, chloroplastic
Location	Chr03: 42221841 .. 42228594 (+)
RNA-Seq Expression	Lcy03g009280
Synteny	Lcy03g009280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAAGCATAACAATTCATTATAATTGTAATTTTCCAAAATGTTAGCTATTAGTGCAAAGTAGATCCACTTACTTCCAAATCTTTTTATCATTCAACTTAGAAAACCCACCAAATTCAAGAAACCGTCCAGATGAATTCGAGCATCAAAACCAAAATATCTTCAATCTTTTTTCCTTAAGAGGAAAAAGGGAATGATTTTTCATCTTAAATTCTGAAAGCTTTGGGCTTGGAGAATTTTGGACCTCACCAAATTGTCTGGTTAAGATTCATCCAACTTCAAATCTCCCACTGCTCCCACCATTCCTCCCTTCCCTCACATCTTCCTTCAGCACCCCCGCCACTGTCGGATAACAATCTACAGTTTCTAATCTCCAAGTTTCTTCAATACCCATTTCCAAGCTCTGGCTGTAAATTTAGGGGTTCCATCTTGTTTTTCAAATCGATTCACAACGAGGGGTCGAATTTGATTGGTGTATTTCCTCTGGTTTTAGCTTTCTAAAAGGATGGTGGGAGCTTTATCTGTTGTGGGTTCATCAGTGGTGGACTCGCATACTTCCCCATGTTTGTGTTTGGATGCTTTGCCCACAACGAGTATCAATCTCAAAAGTAGTGGGGATTTTGTAATGAAGAAGAATTCAATGGGTCGAAAGCGTTTGCCGAAACCGAAGAACTTGGATCTAAGCAGCTCGTTCGTCGATACTGGCCGCGAGTGGCTGCTCTCGGCGGATATGATAAACAGGAGTTCAAGGAAGCAGCACAAAAACAGAAGACTTGTGGTTGTTGATGAACTTGGGGGGCAGTATGAAGATACCTTTGACGATGTTAAAATGGTAAGAATGTGAATTTGAAAAATGATTATTCATCTGTTTGCTTAAAGATAAATAGGCTTATGAGCATGTTTTGATAGTTTCTTGAGACATTGTTGCAATGTTACTGTGTCTTTGGGGAGTGAAATGTATGTTACTGGATCTGAACAAGAAAGCCCATGTAGCTAAATGAACGTTTTAACTCTGATTCAAAAGTTATTTGAGTGCGTGGTTCTAACTTCCTGCTCAAAATGTTGCAGTTTGTGTAGGATTTAGAGTTGCTTTCATGTTGATAAGACATACTTTTGGATGCTTTGGAGATTGTAGTTCTTGAAACGCTTCATTTTAGTTTTGCAATGATTTGGATGCAATTCATCTACGCTAAGAAGTCTTAGCAATTCATGTTTCTTTCTAGTTCTTGATTCTTACTATGTTGATAAAATTAATGATATAGGACAACGCAACAATTCTTGTTAGATGTTGATGGGGCTCTAAGCCTAGAAAAATGATGGGGAAATTGTGAAAATCCTTTCTTCCAAATGATCATGTGAAGATTTGCTAGAGAGCTAAGGAAGTTGGCCTTTATACTAATACTCTAAAGGCATATTAGAGTCTAGAGCAGCATTAGCACATCTATTCTCTTGCTTGTTAGTGCTTTCCAAAGATTGCAGGGAATTTATTCTTTTTTTTAGGATATATGTGAGTGTTTGGACCAGCTTGCACGTACCTCAACTAATCTCACGGGACAACCATCTGACCTTACTACATTTGGTTGCCAAGAAACACATAGGATATTAAATCCTAGGTAGGTGGCCATCGTGGATTGAACTCATTCCCTCAACCCTTTATTTTTCCCATGGCCCTTATTGACCACTAGGCCAACTCATGATGGTTCGAGAAATTTATTCTTAACTATGGTAAACTAAGAAAGACTTCTTTAACTTACCTGCTGAATTAGATCGATCAGTTAGTTGGATGCTATGGACTGGTTCCACATAACAAATGGTATTAGAGCCAAAATTTTGGTTAAACCATGGTTAATGGGAACTTTTGACTTACGTAATATTGGGAAGTGCATTAACATAAAAAGGGCATAAAGAAGTAATACAAAACATGTAAACTATAAAAGATCGTCCCATACTAGCACTTCCACATGATAACTCTACCAAAGGACCTAGTACTTGAATAGCTTTCAATACACGTTACAGTTTTGACTACTCAACAACCAATAGAGTCCCAAGGTAAGAAATAGCAAGTCACACCAAAGGATGTGGTCAATACAGTCATAACCACACTTGTAACTCAATTCACATGGTTTCTTAAAGCCACCAGTAAGATACACATGAAATACAAAAGCCAACAGGTTGATGCAAGAAGAGACTGGTAATTTTCTTTTTAGTGCTTATGAGATGCTTGAGACTTAAGTTTTCCATCATTTTTGTACGAGTTAAGTGCTGCATTTTCAAATTATTGTTTGAGACTTCGTTTTTAGTATGATTTTAGGGGCTGTTTGGGGTAGTGAATTGGTTATAATAGCTGAGGGTTGTAATAGTCTAGGGATTATAATAGTCTGGATGTTATAATAGTCTGTGTTTGGGGTGCAGATTATTATAGTCTGGGATAAAATAGTTTGTGTTTGGGGTGCAGTGTTTGAGATGCAGATTATTTTAGTCTGGGTTCAAATAGTCTATGTTTCAAGCTGACTGTTTTTTTTTCATGACTTTTTTTTTGTTTATTTTCCTCATACAACTTTGTACTTCAAATATTAATAAAAAAATATATTGGGTTTAGTTGTAAAAAAAATAAAGTTTTGGGTACAGGGGTTAAATTATGCGTTTAACTTAAAAGGAAACAAAAATAACCTAAAGTAAGGGTTGATTTTCTTTGTTTTTTAAAAAAATAAAGTTTTGGGTACAGGGGTTAAATTATGCGTTTAACTTAAAAGGAAACAAAAATAACCTAAAGTAAGGGTTGATTTTCTTTGTTTTAGATTCATATAGAAAAACCATATTTGTTTCATTTATGTATTTCCAACATAAAAATAGTGATGCTTATTCAAAACTCATTTTACCTTCATTATCAAAAGAATCAAATAAAATAGAAATCACATAAAATAAAAACTTGAGTAGTATTTTTTTAAAAAAATTATTATTATCACGGTAAACTTAAATACGATAAGTATAATTTGGAATGAAAAATATGGTACGATGAAGGTAAACATTCATATACTTCATTATCAAAAATAATTATGTAATAAAACTACATATTTATATATGTACAAAGACGACCTAGTATCTAACTCCCTAGAAATTTTCCGATTTTTCCGACAACCACCAACAAATTTTTCGGCGACTGAAATTTTTTTCCCTCTTTTTTCCTTTCATTTTCTTCTACCTCTTTTCTTTTTTTTTTCTTTATTTTTCGTTTTTTATATTTTTCGAAATGAAAATGAGAAGAAAGATTATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGGTCGTCGGAAAAAGTCGTCGGTGATCGCCGGAAAAGTGGTCGGTAAGTCGACAGCGGTCGCCGGAAAAGTTATCGGTGGTCGCCGGAAAAGTCGTCGGTGGAAAAGTCACATGGGAGAAGAGAGAAAAGAGTTACTGTACAGGATGGATAGAATAATTGGGTGGGTTGAATAGTGGTTACTGTAGCAACACGGAGGGAAAAATAACCAACTCTACCCCTTATTTTTGTTGATGCCCCAAACACTGGGTTGGTTGTAATAGCCCCCACTATTATAACCAACACAGTGGGCCAAACGGCCCCTTAGTGTTTTCCAGTTTTTTGAGCTTTATACTTCTCCCACCCTTTGAAAAATCATCTGTCTACAAGTTAACAACTGAACTGATAGAGGCTTCTCTGGTTGCAGCAAATACTTAATTATTTTACATACAAGGCTGTGAGGACTGTTATGAACCAGCTGTATGAAATGAACCCCCCACTGTACAGGTGGCTTTACGAGTAAGTGCTGTTTTTTTATCCTGGTTTAGTCGTGTTTCAAGCTGAATTTGAGTTGCTTAGATCAAAACTTGGACATGATTTTGACCTTTTGCTTAAATATTCTTTAGCTTTTTTTTTCTTTTCTTTTTTTAAAATTATGTATATGTGTATATATATCAAATGGACTAAACTTGATTGCTATGTTACCATGTTGCTCATCTTTTTTTTTTTTTTTTGAAGAAAAGCTCCTCTTTGATATAGATTTCTGTGTCCTCTATTTAATAGTATACCTTCTTATAGACTTGATGCCTCTTTTTAACATTTTCACATTAAGGATGAGGGAATGGGATTTGGGGGGAGGGAGAAGAAGGATGGGAGATTTTGAACGTGCAGACTTAACTTAAAGTATTTTTGCACTTTGAGACTGGCCATTTTTCTGTGTTACAGGAACTGGGGTCAGTTTACAATGCTGGTTTCCATATAAATGCATTAAATAGTTGCAGTATTTTATGTCATGGGAACTCAAGTTTAGCTGTCAAATTATTTGTTGTTGGTATCGTCGTGCTCTTGAATTTGATCCAGCTTCTTTTCAACAGTTTCGTCTTAACTAACAAGCCATCAGAAGGAAAACAATTCATTCGCACGCTTGTAAAGGTACTTCTTAAAATCCATACCTACCTTCATGACTTGGATAATATTTAGTTATTAGTAGTGAGGAGAAGAAAAACCTGCACTAATCTATGCTTAGCACATCTTTTCCTCTATTGGTTTTAGACTCTTGCTGTGACTTGTTCCAAAGATCTTATGTTTAAAACGGCTTTATAGCATTTGGCTCTCTCAGTTCACACAGATGTTACAAAATATGATGTGCAGCAATTTGATGGTTAAATTATATGTTTAGTTGCTATGCTTTAATTTTATTTATAGTTTAGTCCACCTTTAAAAGTTCATTGTAGTTGGTCAAACGTCTCAATTATTAGTTTGGATTTTGGACTTTGGAGTAATTGAAATCCAATATACCAAGTTATTGGTGATTGCACTTGAGGAGTCACAGAAATCTAATGGATATTATTTTTAGTAATCTAAAATAACATTAACCCAGCTTTTAAAACCCAGCTCAAACCTATGCTTTTCAATCAATGTGACTTGTCAAATTCTCAGGTCATAGGAATTAAATGTCATGTCCATAAATAATTTCATGATAATGAAAATTTTAAAAGCACTGAGGATCCCCCAATTTGGAACTTAGGTTAGCACACAACAAAATTGCAGTCTAGCTCAATATGAATTCATTAATACGAGAACTTCTATACCTATAGAGTTTTCCAAGGAACAAGAATTCTAACCTACTACTAAGTGTTTTTTTTAAACGAGAAACAAAACTTTTCATTGATATAACTTAATATGGATTCTCGAGAAATACGCCCGAAAAGTAGTTGTTCTAAGTGTATATAAAGCTCCATAACTTGCTGACAAATTAAAAGTAGGAAAAAGAGCTAAAGTCGAAGAAAAGCTTATAGAATGGTGGTTTAGTATGTGAAAAATGAATGTACATATTGGAGTGAGAAAAAACTGTGGACCTCACGATTGCATGCCAAGTTACACAAAGACCCGTGCCTAAGTGAGGTCACCTTGCTCGACACAAGGTAAGCTTAAATACATGGCTAAAATGCTTCCAAATAATCCAGTTCGAAGTTTTTTTTGTTCTGAAATACAGTTCAAAGTTAGTATACAAAGATTTAAGGCCATTACAGTCTTGAGGCACGCCTTGTAAAATAGGGTTTTACTGCATCTGAATCATTGTTTTTCTAATTGACAGGAAAGGCAAGATCTTGCTGAAAGAGTAATGGTCACACGTCTCCACCTGTATGGCAAATGGGTGAAGGTATTGCTATTGTTGTAATATTCCTTCAATACAGTATTTTCTGTTAAGAAGCACGGACACTTTAGTTTGACTAGCTTGTCCGTGTCCGACACGTGTCAAACACTTGGATACTCTGACCCTTGTTGGACACGTATAAGACACTTGTTAGCACAGTTGAAATGTGGCAACTACTAGTTGTACAAAGTCAGTATAGGTCCATATCAAACACTTGTTAAGTATACTAAAAAGACACAATACTAAATGACAAAATAATAAATTTTAAGAGTGAAATACATTAAACTCATTTTTTTAAGCATACAAATGCATAAACTTAACGATTTTGAATTTCCTTGTATAAACCTGATATATATTTTTAAAAATGTATATTTTACTAAACGTGTCTGTGTCCTAGATTTTAAAAAAAAAATGACGTGTCACTGTGTTCGTGTCATATCCGTGTCTCGTGTCTGTATCCATGTTTCTATATAGGAAGGCCAACATTTATATGGATGGAAACATAAGTTTGCAGACAATTATTTCTTCTGTGGTGTAGAAATGTAACCATGCTGAAATATACCAAGAGATCTCGAACGAAAACGTGGACTTAATGCGAGAACGACTTATGGAGACTGTTATATGGCCTTCAGATGACACAAACACAGAGAAGATTGGCTAAAGAATGAGTAGTTTTGAGTTCTCTCTCCCTTATCAATTCTTCTTGTATTGCATCCTTCAATCCTAATTAGTTTGATTGTCGAGTTGCCGATCTTATTCTCACCCATCAAAAAATAGTTCAGCGATGCAGTCGTTTTTTGTTGAAGATATGTATGCAATCAGTCATTATATTATGTAAGATGTATATATATTTAGCCTCCATTTTAGTTATTCTGAAGGTATAATGTAGAGCTGGGATTTTCTCAGAACTTATGCTTCTATTTATATACATGCATATTGGGATGAGAGGGTGCCAGAATGAGCAATCAATTTACTTGTTCTGTCTTTATTTTTCCCACCTCTGGTTTTGTTTGTTTGCACAACTTGAAGTGATCAGACATTTGGATGGAACTTAATCAGAGGATCTTAAAAAAGCAGTTCCATTGGATTGA

mRNA sequence

GCAAGCATAACAATTCATTATAATTGTAATTTTCCAAAATGTTAGCTATTAGTGCAAAGTAGATCCACTTACTTCCAAATCTTTTTATCATTCAACTTAGAAAACCCACCAAATTCAAGAAACCGTCCAGATGAATTCGAGCATCAAAACCAAAATATCTTCAATCTTTTTTCCTTAAGAGGAAAAAGGGAATGATTTTTCATCTTAAATTCTGAAAGCTTTGGGCTTGGAGAATTTTGGACCTCACCAAATTGTCTGGTTAAGATTCATCCAACTTCAAATCTCCCACTGCTCCCACCATTCCTCCCTTCCCTCACATCTTCCTTCAGCACCCCCGCCACTGTCGGATAACAATCTACAGTTTCTAATCTCCAAGTTTCTTCAATACCCATTTCCAAGCTCTGGCTGTAAATTTAGGGGTTCCATCTTGTTTTTCAAATCGATTCACAACGAGGGGTCGAATTTGATTGGTGTATTTCCTCTGGTTTTAGCTTTCTAAAAGGATGGTGGGAGCTTTATCTGTTGTGGGTTCATCAGTGGTGGACTCGCATACTTCCCCATGTTTGTGTTTGGATGCTTTGCCCACAACGAGTATCAATCTCAAAAGTAGTGGGGATTTTGTAATGAAGAAGAATTCAATGGGTCGAAAGCGTTTGCCGAAACCGAAGAACTTGGATCTAAGCAGCTCGTTCGTCGATACTGGCCGCGAGTGGCTGCTCTCGGCGGATATGATAAACAGGAGTTCAAGGAAGCAGCACAAAAACAGAAGACTTGTGGTTGTTGATGAACTTGGGGGGCAGTATGAAGATACCTTTGACGATGTTAAAATGCAAATACTTAATTATTTTACATACAAGGCTGTGAGGACTGTTATGAACCAGCTGTATGAAATGAACCCCCCACTGTACAGGTGGCTTTACGATTTCGTCTTAACTAACAAGCCATCAGAAGGAAAACAATTCATTCGCACGCTTGTAAAGGAAAGGCAAGATCTTGCTGAAAGAGTAATGGTCACACGTCTCCACCTGTATGGCAAATGGGTGAAGAAATGTAACCATGCTGAAATATACCAAGAGATCTCGAACGAAAACGTGGACTTAATGCGAGAACGACTTATGGAGACTGTTATATGGCCTTCAGATGACACAAACACAGAGAAGATTGGCTAAAGAATGAGTAGTTTTGAGTTCTCTCTCCCTTATCAATTCTTCTTGTATTGCATCCTTCAATCCTAATTAGTTTGATTGTCGAGTTGCCGATCTTATTCTCACCCATCAAAAAATAGTTCAGCGATGCAGTCGTTTTTTGTTGAAGATATGTATGCAATCAGTCATTATATTATGTAAGATGTATATATATTTAGCCTCCATTTTAGTTATTCTGAAGGTATAATGTAGAGCTGGGATTTTCTCAGAACTTATGCTTCTATTTATATACATGCATATTGGGATGAGAGGGTGCCAGAATGAGCAATCAATTTACTTGTTCTGTCTTTATTTTTCCCACCTCTGGTTTTGTTTGTTTGCACAACTTGAAGTGATCAGACATTTGGATGGAACTTAATCAGAGGATCTTAAAAAAGCAGTTCCATTGGATTGA

Coding sequence (CDS)

ATGGTGGGAGCTTTATCTGTTGTGGGTTCATCAGTGGTGGACTCGCATACTTCCCCATGTTTGTGTTTGGATGCTTTGCCCACAACGAGTATCAATCTCAAAAGTAGTGGGGATTTTGTAATGAAGAAGAATTCAATGGGTCGAAAGCGTTTGCCGAAACCGAAGAACTTGGATCTAAGCAGCTCGTTCGTCGATACTGGCCGCGAGTGGCTGCTCTCGGCGGATATGATAAACAGGAGTTCAAGGAAGCAGCACAAAAACAGAAGACTTGTGGTTGTTGATGAACTTGGGGGGCAGTATGAAGATACCTTTGACGATGTTAAAATGCAAATACTTAATTATTTTACATACAAGGCTGTGAGGACTGTTATGAACCAGCTGTATGAAATGAACCCCCCACTGTACAGGTGGCTTTACGATTTCGTCTTAACTAACAAGCCATCAGAAGGAAAACAATTCATTCGCACGCTTGTAAAGGAAAGGCAAGATCTTGCTGAAAGAGTAATGGTCACACGTCTCCACCTGTATGGCAAATGGGTGAAGAAATGTAACCATGCTGAAATATACCAAGAGATCTCGAACGAAAACGTGGACTTAATGCGAGAACGACTTATGGAGACTGTTATATGGCCTTCAGATGACACAAACACAGAGAAGATTGGCTAA

Protein sequence

MVGALSVVGSSVVDSHTSPCLCLDALPTTSINLKSSGDFVMKKNSMGRKRLPKPKNLDLSSSFVDTGREWLLSADMINRSSRKQHKNRRLVVVDELGGQYEDTFDDVKMQILNYFTYKAVRTVMNQLYEMNPPLYRWLYDFVLTNKPSEGKQFIRTLVKERQDLAERVMVTRLHLYGKWVKKCNHAEIYQEISNENVDLMRERLMETVIWPSDDTNTEKIG

Homology

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BLAST of Lcy03g009280 vs. ExPASy Swiss-Prot
Match: Q8L9X2 (Chaperonin-like RbcX protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBCX2 PE=1 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 3.1e-63
Identity = 123/217 (56.68%), Postives = 161/217 (74.19%), Query Frame = 0


Query: 1   MVGALSVVGSSVVDSHTSPCLCLDALPTTSINLKSSGDFVMKKNSMGRKRLPKPKNLDLS 60
           MV A  VVGS V+DS +SPCLCLDA  T +I  K              K L K +NL+L 
Sbjct: 1   MVSAWFVVGSPVMDSSSSPCLCLDAHTTGTIRRK--------------KILGKARNLELG 60

Query: 61  SSFVDTGREWLLSADMINRSSRKQHKNRRLVVVDELGGQYEDTFDDVKMQILNYFTYKAV 120
           SSF  +   + LS   ++R + ++ K + L+V +++ G Y+DTF DV+ QI+NYFTYKAV
Sbjct: 61  SSFTGSRIVFRLSPKRVSRIANRKSK-KLLIVNEDVAGNYDDTFGDVQKQIVNYFTYKAV 120

Query: 121 RTVMNQLYEMNPPLYRWLYDFVLTNKPSEGKQFIRTLVKERQDLAERVMVTRLHLYGKWV 180
           RTV++QLYEMNPP Y W Y+ ++TN+P++GK+F+R L KE Q+LAERVM+TRLHLYGKW+
Sbjct: 121 RTVLHQLYEMNPPQYTWFYNHIITNRPTDGKRFLRALGKESQELAERVMITRLHLYGKWI 180

Query: 181 KKCNHAEIYQEISNENVDLMRERLMETVIWPSDDTNT 218
           KKC+H +IYQEIS+EN+ LMRERLMETVIWPSDDTN+
Sbjct: 181 KKCDHGKIYQEISDENLALMRERLMETVIWPSDDTNS 202

[Close]

BLAST of Lcy03g009280 vs. ExPASy Swiss-Prot
Match: Q44212 (RuBisCO chaperone RbcX OS=Anabaena sp. (strain CA / ATCC 33047) OX=52271 GN=rbcX PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.7e-08
Identity = 30/70 (42.86%), Postives = 44/70 (62.86%), Query Frame = 0


Query: 106 DVKMQILNYFTYKAVRTVMNQLYEMNPPLYRWLYDFVLTNKPSEGKQFIRTLVKERQDLA 165
           D    + +Y TY+A+RTV+ QL E NPPL  WL++F    K  +G+++I  L  E+ DLA
Sbjct: 9   DTAKTLQSYLTYQALRTVLAQLGETNPPLALWLHNF-SAGKVQDGEKYIEELFLEKPDLA 68

Query: 166 ERVMVTRLHL 176
            R+M  R H+
Sbjct: 69  LRIMTVREHI 77

[Close]

BLAST of Lcy03g009280 vs. ExPASy Swiss-Prot
Match: Q8DIS6 (RuBisCO chaperone RbcX OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=rbcX PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.3e-08
Identity = 25/65 (38.46%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 111 ILNYFTYKAVRTVMNQLYEMNPPLYRWLYDFVLTNKPSEGKQFIRTLVKERQDLAERVMV 170
           +++Y TY+AVRTV+ QL E +PP   WL+ F       +G++++  L +E+ DL  R++ 
Sbjct: 14  LISYLTYQAVRTVIGQLAETDPPRSLWLHQFTSQESIQDGERYLEALFREQPDLGFRILT 73

Query: 171 TRLHL 176
            R HL
Sbjct: 74  VREHL 78

[Close]

BLAST of Lcy03g009280 vs. ExPASy Swiss-Prot
Match: O86418 (RuBisCO chaperone RbcX OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rbcX PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-07
Identity = 28/70 (40.00%), Postives = 44/70 (62.86%), Query Frame = 0


Query: 106 DVKMQILNYFTYKAVRTVMNQLYEMNPPLYRWLYDFVLTNKPSEGKQFIRTLVKERQDLA 165
           D    + +Y TY+A+ TV+ QL E NPPL  WL+ F +  K  +G+ +++ L +E+ DLA
Sbjct: 9   DTAKTLQSYLTYQALMTVLAQLGETNPPLALWLHTFSV-GKVQDGEAYVKELFREQPDLA 68

Query: 166 ERVMVTRLHL 176
            R+M  R H+
Sbjct: 69  LRIMTVREHI 77

[Close]

BLAST of Lcy03g009280 vs. ExPASy TrEMBL
Match: A0A6J1EJF5 (chaperonin-like RbcX protein 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111433858 PE=4 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 9.5e-116
Identity = 208/221 (94.12%), Postives = 215/221 (97.29%), Query Frame = 0


Query: 1   MVGALSVVGSSVVDSHTSPCLCLDALPTTSINLKSSGDFVMKKNSMGRKRLPKPKNLDLS 60
           MV  LSVVGSSVVDSHTSPCLCLD LPTTSINLKSSGDFVMK+NSMGRKRLPKPK+LDLS
Sbjct: 1   MVRGLSVVGSSVVDSHTSPCLCLDVLPTTSINLKSSGDFVMKRNSMGRKRLPKPKHLDLS 60

Query: 61  SSFVDTGREWLLSADMINRSSRKQHKNRRLVVVDELGGQYEDTFDDVKMQILNYFTYKAV 120
           SSFVD GREWLLSADMINRSSRKQHKNRRLVV+DELGGQYEDTFDDVKMQILNYFTYKAV
Sbjct: 61  SSFVDAGREWLLSADMINRSSRKQHKNRRLVVIDELGGQYEDTFDDVKMQILNYFTYKAV 120

Query: 121 RTVMNQLYEMNPPLYRWLYDFVLTNKPSEGKQFIRTLVKERQDLAERVMVTRLHLYGKWV 180
           RTVMNQLYEMNPP YRWLYDFVL+NKPS+GK FIRTLVKERQDLAERVM+TRLHLYGKWV
Sbjct: 121 RTVMNQLYEMNPPTYRWLYDFVLSNKPSDGKHFIRTLVKERQDLAERVMITRLHLYGKWV 180

Query: 181 KKCNHAEIYQEISNENVDLMRERLMETVIWPSDDTNTEKIG 222
           KKCNHAEIYQEISNENV+LMRERLMETVIWPSDDTNTEKIG
Sbjct: 181 KKCNHAEIYQEISNENVELMRERLMETVIWPSDDTNTEKIG 221

[Close]

BLAST of Lcy03g009280 vs. ExPASy TrEMBL
Match: A0A6J1HZ31 (chaperonin-like RbcX protein 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467533 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.1e-115
Identity = 208/221 (94.12%), Postives = 215/221 (97.29%), Query Frame = 0


Query: 1   MVGALSVVGSSVVDSHTSPCLCLDALPTTSINLKSSGDFVMKKNSMGRKRLPKPKNLDLS 60
           MV  LSVVGSSVVDSHTSPCLCLD LPTTSINLKSSGDFVMKK+SMGRKRLPKPK+LDLS
Sbjct: 1   MVRGLSVVGSSVVDSHTSPCLCLDILPTTSINLKSSGDFVMKKHSMGRKRLPKPKHLDLS 60

Query: 61  SSFVDTGREWLLSADMINRSSRKQHKNRRLVVVDELGGQYEDTFDDVKMQILNYFTYKAV 120
           SSFVD GREWLLSADMINRSSRKQHKNRRLVV+DELGGQYEDTFDDVKMQILNYFTYKAV
Sbjct: 61  SSFVDAGREWLLSADMINRSSRKQHKNRRLVVIDELGGQYEDTFDDVKMQILNYFTYKAV 120

Query: 121 RTVMNQLYEMNPPLYRWLYDFVLTNKPSEGKQFIRTLVKERQDLAERVMVTRLHLYGKWV 180
           RTVMNQLYEMNPP YRWLYDFVL+NKPS+GK FIRTLVKERQDLAERVM+TRLHLYGKWV
Sbjct: 121 RTVMNQLYEMNPPTYRWLYDFVLSNKPSDGKHFIRTLVKERQDLAERVMITRLHLYGKWV 180

Query: 181 KKCNHAEIYQEISNENVDLMRERLMETVIWPSDDTNTEKIG 222
           KKCNHAEIYQEISNENV+LMRERLMETVIWPSDDTNTEKIG
Sbjct: 181 KKCNHAEIYQEISNENVELMRERLMETVIWPSDDTNTEKIG 221

[Close]

BLAST of Lcy03g009280 vs. ExPASy TrEMBL
Match: A0A6J1DJZ6 (chaperonin-like RbcX protein 2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111021602 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.1e-111
Identity = 205/222 (92.34%), Postives = 215/222 (96.85%), Query Frame = 0


Query: 1   MVGALSVVGSSVVDSHTSPCLCLDALPTTSINLKSSGDFVMKKNSMGRKRLPKPKNLDLS 60
           MVGALSVVGSSVVDSHTSPCLCLDALPTTSINLKSSGDFVMKK+SM R RLPKPK+LDLS
Sbjct: 1   MVGALSVVGSSVVDSHTSPCLCLDALPTTSINLKSSGDFVMKKSSMSRNRLPKPKHLDLS 60

Query: 61  SSFVDTGREWLLSADMINRSSRKQHKN-RRLVVVDELGGQYEDTFDDVKMQILNYFTYKA 120
           SSFVDTGREWLLS DMINRSSRKQHKN RRLVVVDELGGQYED+F+DVK QILNYFTYKA
Sbjct: 61  SSFVDTGREWLLSVDMINRSSRKQHKNRRRLVVVDELGGQYEDSFEDVKTQILNYFTYKA 120

Query: 121 VRTVMNQLYEMNPPLYRWLYDFVLTNKPSEGKQFIRTLVKERQDLAERVMVTRLHLYGKW 180
           VRTVMNQLYEMNPP YRWLYDFVLT+KP+EGK+FIRTLVKERQDLAERVMVTRLHLYGKW
Sbjct: 121 VRTVMNQLYEMNPPQYRWLYDFVLTHKPAEGKRFIRTLVKERQDLAERVMVTRLHLYGKW 180

Query: 181 VKKCNHAEIYQEISNENVDLMRERLMETVIWPSDDTNTEKIG 222
           VKKCNHAEIYQEI +ENV++MRERLMETVIWPSDDTNTEKIG
Sbjct: 181 VKKCNHAEIYQEILDENVEVMRERLMETVIWPSDDTNTEKIG 222

[Close]

BLAST of Lcy03g009280 vs. ExPASy TrEMBL
Match: A0A5D3D5P8 (RcbX domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00500 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.5e-108
Identity = 199/222 (89.64%), Postives = 210/222 (94.59%), Query Frame = 0


Query: 1   MVGALSVVGSSVVDSHTSPCLCLDALPTTSINLKSSGDFVMKKN-SMGRKRLPKPKNLDL 60
           MVGALS+VGSSVVDSHTSPCLCLDALPTTSINLKS GDFVMKK  SMGR+RLPKPK+LDL
Sbjct: 1   MVGALSMVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKYSMGRQRLPKPKHLDL 60

Query: 61  SSSFVDTGREWLLSADMINRSSRKQHKNRRLVVVDELGGQYEDTFDDVKMQILNYFTYKA 120
           SSSFVD G EWLLS DMINRSSRKQ KNRRLVVVDELGGQYED FDDVKMQ+LNYFTYKA
Sbjct: 61  SSSFVDNGLEWLLSVDMINRSSRKQTKNRRLVVVDELGGQYEDNFDDVKMQMLNYFTYKA 120

Query: 121 VRTVMNQLYEMNPPLYRWLYDFVLTNKPSEGKQFIRTLVKERQDLAERVMVTRLHLYGKW 180
           VRTVMNQLYEMNPP YRWLYDFVL NKP++GK FIR LVKE+QDLAERVM+TRLHLYGKW
Sbjct: 121 VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW 180

Query: 181 VKKCNHAEIYQEISNENVDLMRERLMETVIWPSDDTNTEKIG 222
           VKKCNHAEIYQEIS+ENV+LMRERLM+TVIWPSDDTNTEKIG
Sbjct: 181 VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG 222

[Close]

BLAST of Lcy03g009280 vs. ExPASy TrEMBL
Match: A0A1S3BNK3 (uncharacterized protein LOC103492031 OS=Cucumis melo OX=3656 GN=LOC103492031 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.5e-108
Identity = 199/222 (89.64%), Postives = 210/222 (94.59%), Query Frame = 0


Query: 1   MVGALSVVGSSVVDSHTSPCLCLDALPTTSINLKSSGDFVMKKN-SMGRKRLPKPKNLDL 60
           MVGALS+VGSSVVDSHTSPCLCLDALPTTSINLKS GDFVMKK  SMGR+RLPKPK+LDL
Sbjct: 1   MVGALSMVGSSVVDSHTSPCLCLDALPTTSINLKSCGDFVMKKKYSMGRQRLPKPKHLDL 60

Query: 61  SSSFVDTGREWLLSADMINRSSRKQHKNRRLVVVDELGGQYEDTFDDVKMQILNYFTYKA 120
           SSSFVD G EWLLS DMINRSSRKQ KNRRLVVVDELGGQYED FDDVKMQ+LNYFTYKA
Sbjct: 61  SSSFVDNGLEWLLSVDMINRSSRKQTKNRRLVVVDELGGQYEDNFDDVKMQMLNYFTYKA 120

Query: 121 VRTVMNQLYEMNPPLYRWLYDFVLTNKPSEGKQFIRTLVKERQDLAERVMVTRLHLYGKW 180
           VRTVMNQLYEMNPP YRWLYDFVL NKP++GK FIR LVKE+QDLAERVM+TRLHLYGKW
Sbjct: 121 VRTVMNQLYEMNPPQYRWLYDFVLNNKPTDGKHFIRRLVKEQQDLAERVMITRLHLYGKW 180

Query: 181 VKKCNHAEIYQEISNENVDLMRERLMETVIWPSDDTNTEKIG 222
           VKKCNHAEIYQEIS+ENV+LMRERLM+TVIWPSDDTNTEKIG
Sbjct: 181 VKKCNHAEIYQEISDENVELMRERLMQTVIWPSDDTNTEKIG 222

[Close]

BLAST of Lcy03g009280 vs. NCBI nr
Match: XP_022926878.1 (chaperonin-like RbcX protein 2, chloroplastic [Cucurbita moschata] >KAG7022086.1 Chaperonin-like RbcX protein 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 426.0 bits (1094), Expect = 2.0e-115
Identity = 208/221 (94.12%), Postives = 215/221 (97.29%), Query Frame = 0


Query: 1   MVGALSVVGSSVVDSHTSPCLCLDALPTTSINLKSSGDFVMKKNSMGRKRLPKPKNLDLS 60
           MV  LSVVGSSVVDSHTSPCLCLD LPTTSINLKSSGDFVMK+NSMGRKRLPKPK+LDLS
Sbjct: 1   MVRGLSVVGSSVVDSHTSPCLCLDVLPTTSINLKSSGDFVMKRNSMGRKRLPKPKHLDLS 60

Query: 61  SSFVDTGREWLLSADMINRSSRKQHKNRRLVVVDELGGQYEDTFDDVKMQILNYFTYKAV 120
           SSFVD GREWLLSADMINRSSRKQHKNRRLVV+DELGGQYEDTFDDVKMQILNYFTYKAV
Sbjct: 61  SSFVDAGREWLLSADMINRSSRKQHKNRRLVVIDELGGQYEDTFDDVKMQILNYFTYKAV 120

Query: 121 RTVMNQLYEMNPPLYRWLYDFVLTNKPSEGKQFIRTLVKERQDLAERVMVTRLHLYGKWV 180
           RTVMNQLYEMNPP YRWLYDFVL+NKPS+GK FIRTLVKERQDLAERVM+TRLHLYGKWV
Sbjct: 121 RTVMNQLYEMNPPTYRWLYDFVLSNKPSDGKHFIRTLVKERQDLAERVMITRLHLYGKWV 180

Query: 181 KKCNHAEIYQEISNENVDLMRERLMETVIWPSDDTNTEKIG 222
           KKCNHAEIYQEISNENV+LMRERLMETVIWPSDDTNTEKIG
Sbjct: 181 KKCNHAEIYQEISNENVELMRERLMETVIWPSDDTNTEKIG 221

[Close]

BLAST of Lcy03g009280 vs. NCBI nr
Match: XP_022968239.1 (chaperonin-like RbcX protein 2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 424.9 bits (1091), Expect = 4.4e-115
Identity = 208/221 (94.12%), Postives = 215/221 (97.29%), Query Frame = 0


Query: 1   MVGALSVVGSSVVDSHTSPCLCLDALPTTSINLKSSGDFVMKKNSMGRKRLPKPKNLDLS 60
           MV  LSVVGSSVVDSHTSPCLCLD LPTTSINLKSSGDFVMKK+SMGRKRLPKPK+LDLS
Sbjct: 1   MVRGLSVVGSSVVDSHTSPCLCLDILPTTSINLKSSGDFVMKKHSMGRKRLPKPKHLDLS 60

Query: 61  SSFVDTGREWLLSADMINRSSRKQHKNRRLVVVDELGGQYEDTFDDVKMQILNYFTYKAV 120
           SSFVD GREWLLSADMINRSSRKQHKNRRLVV+DELGGQYEDTFDDVKMQILNYFTYKAV
Sbjct: 61  SSFVDAGREWLLSADMINRSSRKQHKNRRLVVIDELGGQYEDTFDDVKMQILNYFTYKAV 120

Query: 121 RTVMNQLYEMNPPLYRWLYDFVLTNKPSEGKQFIRTLVKERQDLAERVMVTRLHLYGKWV 180
           RTVMNQLYEMNPP YRWLYDFVL+NKPS+GK FIRTLVKERQDLAERVM+TRLHLYGKWV
Sbjct: 121 RTVMNQLYEMNPPTYRWLYDFVLSNKPSDGKHFIRTLVKERQDLAERVMITRLHLYGKWV 180

Query: 181 KKCNHAEIYQEISNENVDLMRERLMETVIWPSDDTNTEKIG 222
           KKCNHAEIYQEISNENV+LMRERLMETVIWPSDDTNTEKIG
Sbjct: 181 KKCNHAEIYQEISNENVELMRERLMETVIWPSDDTNTEKIG 221

[Close]

BLAST of Lcy03g009280 vs. NCBI nr
Match: KAG6588188.1 (Chaperonin-like RbcX protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 424.1 bits (1089), Expect = 7.4e-115
Identity = 207/221 (93.67%), Postives = 215/221 (97.29%), Query Frame = 0


Query: 1   MVGALSVVGSSVVDSHTSPCLCLDALPTTSINLKSSGDFVMKKNSMGRKRLPKPKNLDLS 60
           MV  LSVVGSSVVDSHTSPCLCLD LPTTSINLKSSGDFVM+K+SMGRKRLPKPK+LDLS
Sbjct: 1   MVRGLSVVGSSVVDSHTSPCLCLDVLPTTSINLKSSGDFVMRKHSMGRKRLPKPKHLDLS 60

Query: 61  SSFVDTGREWLLSADMINRSSRKQHKNRRLVVVDELGGQYEDTFDDVKMQILNYFTYKAV 120
           SSFVD GREWLLSADMINRSSRKQHKNRRLVV+DELGGQYEDTFDDVKMQILNYFTYKAV
Sbjct: 61  SSFVDAGREWLLSADMINRSSRKQHKNRRLVVIDELGGQYEDTFDDVKMQILNYFTYKAV 120

Query: 121 RTVMNQLYEMNPPLYRWLYDFVLTNKPSEGKQFIRTLVKERQDLAERVMVTRLHLYGKWV 180
           RTVMNQLYEMNPP YRWLYDFVL+NKPS+GK FIRTLVKERQDLAERVM+TRLHLYGKWV
Sbjct: 121 RTVMNQLYEMNPPTYRWLYDFVLSNKPSDGKHFIRTLVKERQDLAERVMITRLHLYGKWV 180

Query: 181 KKCNHAEIYQEISNENVDLMRERLMETVIWPSDDTNTEKIG 222
           KKCNHAEIYQEISNENV+LMRERLMETVIWPSDDTNTEKIG
Sbjct: 181 KKCNHAEIYQEISNENVELMRERLMETVIWPSDDTNTEKIG 221

[Close]

BLAST of Lcy03g009280 vs. NCBI nr
Match: XP_023530337.1 (chaperonin-like RbcX protein 2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 421.4 bits (1082), Expect = 4.8e-114
Identity = 205/221 (92.76%), Postives = 214/221 (96.83%), Query Frame = 0


Query: 1   MVGALSVVGSSVVDSHTSPCLCLDALPTTSINLKSSGDFVMKKNSMGRKRLPKPKNLDLS 60
           MV  LSVVGSSVVDSHTSPCLCLD LPTTSINLKSSGDFVM+K+SMGRKRLPKPK+ DLS
Sbjct: 1   MVRGLSVVGSSVVDSHTSPCLCLDVLPTTSINLKSSGDFVMRKHSMGRKRLPKPKHFDLS 60

Query: 61  SSFVDTGREWLLSADMINRSSRKQHKNRRLVVVDELGGQYEDTFDDVKMQILNYFTYKAV 120
           SSFVD GREWL+SADMINRSSRKQHKNRRLVV+DELGGQYEDTFDDVKMQILNYFTYKAV
Sbjct: 61  SSFVDAGREWLVSADMINRSSRKQHKNRRLVVIDELGGQYEDTFDDVKMQILNYFTYKAV 120

Query: 121 RTVMNQLYEMNPPLYRWLYDFVLTNKPSEGKQFIRTLVKERQDLAERVMVTRLHLYGKWV 180
           RTVMNQLYEMNPP YRWLYDFVL+NKPS+GK FIRTLVKERQDLAERVM+TRLHLYGKWV
Sbjct: 121 RTVMNQLYEMNPPTYRWLYDFVLSNKPSDGKHFIRTLVKERQDLAERVMITRLHLYGKWV 180

Query: 181 KKCNHAEIYQEISNENVDLMRERLMETVIWPSDDTNTEKIG 222
           KKCNHAEIYQEISNENV+LMRERLMETVIWPSDDTNTEKIG
Sbjct: 181 KKCNHAEIYQEISNENVELMRERLMETVIWPSDDTNTEKIG 221

[Close]

BLAST of Lcy03g009280 vs. NCBI nr
Match: XP_022154308.1 (chaperonin-like RbcX protein 2, chloroplastic [Momordica charantia])

HSP 1 Score: 412.5 bits (1059), Expect = 2.2e-111
Identity = 205/222 (92.34%), Postives = 215/222 (96.85%), Query Frame = 0


Query: 1   MVGALSVVGSSVVDSHTSPCLCLDALPTTSINLKSSGDFVMKKNSMGRKRLPKPKNLDLS 60
           MVGALSVVGSSVVDSHTSPCLCLDALPTTSINLKSSGDFVMKK+SM R RLPKPK+LDLS
Sbjct: 1   MVGALSVVGSSVVDSHTSPCLCLDALPTTSINLKSSGDFVMKKSSMSRNRLPKPKHLDLS 60

Query: 61  SSFVDTGREWLLSADMINRSSRKQHKN-RRLVVVDELGGQYEDTFDDVKMQILNYFTYKA 120
           SSFVDTGREWLLS DMINRSSRKQHKN RRLVVVDELGGQYED+F+DVK QILNYFTYKA
Sbjct: 61  SSFVDTGREWLLSVDMINRSSRKQHKNRRRLVVVDELGGQYEDSFEDVKTQILNYFTYKA 120

Query: 121 VRTVMNQLYEMNPPLYRWLYDFVLTNKPSEGKQFIRTLVKERQDLAERVMVTRLHLYGKW 180
           VRTVMNQLYEMNPP YRWLYDFVLT+KP+EGK+FIRTLVKERQDLAERVMVTRLHLYGKW
Sbjct: 121 VRTVMNQLYEMNPPQYRWLYDFVLTHKPAEGKRFIRTLVKERQDLAERVMVTRLHLYGKW 180

Query: 181 VKKCNHAEIYQEISNENVDLMRERLMETVIWPSDDTNTEKIG 222
           VKKCNHAEIYQEI +ENV++MRERLMETVIWPSDDTNTEKIG
Sbjct: 181 VKKCNHAEIYQEILDENVEVMRERLMETVIWPSDDTNTEKIG 222

[Close]

BLAST of Lcy03g009280 vs. TAIR 10
Match: AT5G19855.1 (Chaperonin-like RbcX protein )

HSP 1 Score: 243.0 bits (619), Expect = 2.2e-64
Identity = 123/217 (56.68%), Postives = 161/217 (74.19%), Query Frame = 0


Query: 1   MVGALSVVGSSVVDSHTSPCLCLDALPTTSINLKSSGDFVMKKNSMGRKRLPKPKNLDLS 60
           MV A  VVGS V+DS +SPCLCLDA  T +I  K              K L K +NL+L 
Sbjct: 1   MVSAWFVVGSPVMDSSSSPCLCLDAHTTGTIRRK--------------KILGKARNLELG 60

Query: 61  SSFVDTGREWLLSADMINRSSRKQHKNRRLVVVDELGGQYEDTFDDVKMQILNYFTYKAV 120
           SSF  +   + LS   ++R + ++ K + L+V +++ G Y+DTF DV+ QI+NYFTYKAV
Sbjct: 61  SSFTGSRIVFRLSPKRVSRIANRKSK-KLLIVNEDVAGNYDDTFGDVQKQIVNYFTYKAV 120

Query: 121 RTVMNQLYEMNPPLYRWLYDFVLTNKPSEGKQFIRTLVKERQDLAERVMVTRLHLYGKWV 180
           RTV++QLYEMNPP Y W Y+ ++TN+P++GK+F+R L KE Q+LAERVM+TRLHLYGKW+
Sbjct: 121 RTVLHQLYEMNPPQYTWFYNHIITNRPTDGKRFLRALGKESQELAERVMITRLHLYGKWI 180

Query: 181 KKCNHAEIYQEISNENVDLMRERLMETVIWPSDDTNT 218
           KKC+H +IYQEIS+EN+ LMRERLMETVIWPSDDTN+
Sbjct: 181 KKCDHGKIYQEISDENLALMRERLMETVIWPSDDTNS 202

The following BLAST results are available for this feature:

BLAST of Lcy03g009280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9X2	3.1e-63	56.68	Chaperonin-like RbcX protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q44212	3.7e-08	42.86	RuBisCO chaperone RbcX OS=Anabaena sp. (strain CA / ATCC 33047) OX=52271 GN=rbcX...	[more]
Q8DIS6	8.3e-08	38.46	RuBisCO chaperone RbcX OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 ...	[more]
O86418	1.4e-07	40.00	RuBisCO chaperone RbcX OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) O...	[more]

BLAST of Lcy03g009280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJF5	9.5e-116	94.12	chaperonin-like RbcX protein 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1HZ31	2.1e-115	94.12	chaperonin-like RbcX protein 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1DJZ6	1.1e-111	92.34	chaperonin-like RbcX protein 2, chloroplastic OS=Momordica charantia OX=3673 GN=...	[more]
A0A5D3D5P8	1.5e-108	89.64	RcbX domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BNK3	1.5e-108	89.64	uncharacterized protein LOC103492031 OS=Cucumis melo OX=3656 GN=LOC103492031 PE=...	[more]

BLAST of Lcy03g009280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926878.1	2.0e-115	94.12	chaperonin-like RbcX protein 2, chloroplastic [Cucurbita moschata] >KAG7022086.1...	[more]
XP_022968239.1	4.4e-115	94.12	chaperonin-like RbcX protein 2, chloroplastic [Cucurbita maxima]	[more]
KAG6588188.1	7.4e-115	93.67	Chaperonin-like RbcX protein 2, chloroplastic, partial [Cucurbita argyrosperma s...	[more]
XP_023530337.1	4.8e-114	92.76	chaperonin-like RbcX protein 2, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022154308.1	2.2e-111	92.34	chaperonin-like RbcX protein 2, chloroplastic [Momordica charantia]	[more]

BLAST of Lcy03g009280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19855.1	2.2e-64	56.68	Chaperonin-like RbcX protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003435	Chaperonin-like RbcX	PFAM	PF02341	RcbX	coord: 109..207 e-value: 2.8E-19 score: 69.4
IPR003435	Chaperonin-like RbcX	PANTHER	PTHR33791	FAMILY NOT NAMED	coord: 1..221
IPR038052	Chaperonin-like RbcX superfamily	GENE3D	1.10.1200.210		coord: 93..218 e-value: 5.6E-48 score: 163.9
IPR038052	Chaperonin-like RbcX superfamily	SUPERFAMILY	158615	RbcX-like	coord: 99..218
None	No IPR available	PANTHER	PTHR33791:SF1	CHAPERONIN-LIKE RBCX PROTEIN 2, CHLOROPLASTIC	coord: 1..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g009280.1	Lcy03g009280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015977	carbon fixation
biological_process	GO:0015979	photosynthesis
biological_process	GO:0006457	protein folding
biological_process	GO:0110102	ribulose bisphosphate carboxylase complex assembly
molecular_function	GO:0044183	protein folding chaperone