Lcy03g009080 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g009080
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	exosome complex component RRP45A-like
Location	Chr03: 41925802 .. 41933976 (-)
RNA-Seq Expression	Lcy03g009080
Synteny	Lcy03g009080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCACGTCGTCTCCTCCTCCGTTTCAGCAGCTCAGTGTCGCCGCTGCTTGTCTCCCGTTCACTGCCGCCGCCACTGTCGTCCTTCTTCCGTTCGTGCCGCTGCAGCCTCCCTCCTGGCGGTTTTGCTCTGATTTTCTACTCTTTGTTGTTACTGGTATTCTCTCAAATCTCCATCTGACTTTCTTCTCATTTGAAAATTGAAATTCTCTCTCTCAATTAACCAATACAATAACGAATGATACTTCGAATTTATGGAAATAAGAGCATGAATCTAGACATATTTTTAATTGGAACATCAAATCACGATGGTGGGAAGTTCAAATCTGATTAAATCACATATTTTTCGATTATTCATTAGGAGTAATGTGGATTATTTTTCTTCCGCAATATAACCTTCAACTACTAATTTCAGAAATCAAAACAAAATGCTAAAAAATTTATAATAAAAGGATAAACTTAACACAAAAAGTTTCTCCTTTGTCGTGCCTTTTATATATACTACAGATATTAATATGAGTGTTTTTGTCCTTTTTGCTATGGTTGATATGTGACATATATCTAAGGTTTAGTAGTTGGGAGTATATCTAAAGCCTTGCCATCACGTTGCACAGAGAAGATTGCATTGAATTCTAAACTTTGAACTTTTTCTTTCAAGTTTAGTCAATAGCTTCTTGAACCCCTTTTTAATTCATGTCTTGAGTTGCATGTCAAGAACATTTAGGTAGAACTGATCGTAGCTTTGAACTTAAGGCAATCCGTGTCTATTCTAAATTTTAGAATTGAAATCACGTACCTGAAAGATTCCTAATTATCCAATTCACTACGAATTTCATATCATATTATCCTTCACCTTTTTTAAAATCAAAATTATATTTTTGTAAGACAAAAAAGCTAATACGTATAAGTATATATTTCAACTATTTATTTATTTATTTGTATTTCCCGGCGGCTACTCAGTTCACCTCCATATCTCTCTCCATCACACACAAAGCCCTATCTCTCTTTTTGCTCTCTCTAACCCAAGAAAACAGCCCACTTTCAGCAGAAACCCCCCACCAAGTACCAAATAGGGATTCTCTGGTTATGAGCATTGCCGCTCAGTTCTGAATAAATCAGACCCACAAAAAAATCCCCACTTGTCCCTTCAATTGGTGGGTTGTTTCAGTCAGTGGTGAGCTCTTCTTCATCGCCTTAACATAATAGAATGCCTCTCTGACATTAATGATTTGCATTTGCAGGAAAAAGGGTGTACTAAATGGAGCAGAGATTAGCCAATGTATGGCGTCTCTCTGCGAACGAGAAGAAATTTATTGAAACAGCCCTTCTTTCGGATTTGAGGGTCGATGGTCGTCGCCCTTTTGATTATCGGAATATCACTATCAACTTTGGCAAGTAATGTTTCTCAATTGTTTATTACTGTTTCATACTTTGTCTTATCCTTTTCTTATGGGTGGTGATGATATTGAATTTTGTGCAGGGATGATGGTTCTTCAGAGGTGCAGCTTGGCCATACTCATGTAATGGGTTTTGTGACTGCTCAGCTAGTTCAACCGTACAGGGATCGTCCTAATGAGGGCACTCTTTCTATATATACTGAGTTCTCTCCTATGGCTGATCCCTCATTTGAGCCCGGCCGTCCTGGAGAGTCTGCCGTTGAGTTAGGCCGCGTAATCGACCGTGGTCTGCGGTAATTATCTTTATGGCTCTTTTTCTTTGTTCCCCACCAATTGCTGGCTTTGAATTCCTTGTGTGATTTGTGAGTAGAAGGTGTGTTACCTTTAGTTCTGATAATTTGAAGTTAATTTATTGCATTATCCGAGTGCAACGGGATATCCTAGAGTAGAACATAGGTGTCGTTTATTCATTCCTGATCAGTGATGCTCTGATCTCTATTTCTTCTCGAAATGCTGAATTGTTGAATCCCAGCAGAAAAGTTCTCAAAAGTTATATTGTATTTCGATGTCTTTACCTTAGTTAAGTGCAATTGTGCATCAAAGAGTAAGGTTGTTGGTTCTTCACAGATGAGATTTTCATCGATTCCCACACTGAGTACTGTCCACATTGTTGTCCATTATCTATATAGAACTAATGTAACACATCTATATGTTATTCAGTTACTTAGTCCCTAACAAATTTTGCTATCAAGCTGCGCTTCTGGTCTATTGATAGACCTAAAATAGAGTACAATGTTTCTCTAGTTTGACAGTTGGTTAGTAACCTATTTCATCGAGCTATACTTTGTAATTTGCAGGGAGAGTAGGGCAGTGGATACAGAATCACTTTGTGTTGTTTCTGGCAAGTCTGTATGGGCCATCCGAGTTGACCTCCACATTCTAGATAATGGGGGGTAAGCTTTTGAATTCTTTATTTTATTTTGCTTATTGTCATAATTATGATATTAATTGGTAATTAACAATCCTGCGAGCAGAAACCTTGTGGATGCAGCTAATATTGCTGCTTTGGCTGCTCTCTCAACTTTCCGAAGGCCTGAGTGTTCACTAGGGGGAGATGATGATCAGGAAGTGATAGTTCATCCTCCTGAGGTCAGCTCTTCAAAACTTTCTTGGAATTTAACTTGAAGTGCGTAAATTCTTATTAGCAACTGCCAAGTTGAGTAGACGTGTTTAAATTTGAGGGTAGGCTGTACCTTGGGGAGATTCAAGGGGAAAGGTCATATGTCATAGGAGACTTGCAACTGGATTTAGATGAGATAGATAGGGTGAGAGTGTAAGAAAGCCTGAGAGCTAAGGTTTTGTTGGTGGAAGAGTAGAAGGTGAGTTTGAGGGTCCAGATCCAAGGAGAAAGGTCAAGGTAATTGAGAGAAGTCATTTTCAGGGTGCTGTGTAGTGCAGATTGGATGAGGGATGACCTGGTGAGAATTTTTTCTTGGGGAAAAAAATTCTTCAAAGAAAGAAGGTTCCCATCTGCACTTATTTGCTGCAGTTGTTATCAGTGTTTTAAAAGGCGCGCGCCCGGGCGCGCCTAGGCACAAGGCGCAACCTTAGCGCCTCGCTTCGAAGAAGCGAGGCGCAGTGAGGAAGGCGCGGCCAAGGCGCGCGCCTTCCTCGAAGCCCCTGAGGCGCGCGCCTTAGGCGCCTCTGGGGCTTCACAATTTTATATATGTTTTAATTTTTTTTAAACATAAATACTTGTTATGAAGCTAATTTTAAATTTAGCTTCTGGGGCGTTGACCCCGAACCCCCATCGGAGTGTCAAATATCATATTCAAGCTTGTAAGCGAAGAAAGAATCCAAGAATACCAACTCTTATGTTGTACATACATGAGTGAATAACACAGATGAGCAAACAACAAGGAAGGCATATTAACAATACTAAACTCACTGTTTTTTGTGGAGTATTGACATTTGACTCTATGTTGGAAGACTAATATTTGAACCTTATTTATCTTTTATCTATTTTTCTTGTTTAAAAACTTCATTACTTGCCATGAAAGTGTTTTATATACATGTATATATTTTTGTAAATTTTTTTTCTATATAGTGCGCCTTACATAATAAAGCCCGCGCCTTTTTGTGCGCCTTGCGCCTAGGCCCCAGGAGGCCATTGCGCCTTAGTGCGCCTTGAGCCTTTTAAAACACTGGTTGTTATCAAGCAATGGGGGCTGTTCTTTTTTTCCTAGTCAATTTTGAATTGTTCAAACTTGTAAGGAAGGAGAATGTTCATCATTATTCCAACAAGTAGAATGGGAAAGCGTTGATTTCCTTCAAGCATAAACTGGAGTTGTTTCTTTCTTTTGCAAGAGTTTCTACAATCATTAGTTTGGATATTGTGAAGAAGCATAAACTGGACTCCACTCCAGATCCTTCTGTTGTGATTTTTTCAAAGGATGTTTCCTTGATTTTTTGATAATTTGAAACAGTTGGAAGATCAACTGTTAAATATCTGTGGCACTGTAGTCCTTCAAATATCTTAAATGAGACATAAATATTATATTTTTTAACTTTCTTTTTTTAGATTCAATAATTTAAGGAAAATTTCATATTTTCCATCAGCATCAACAGTTTTATGCATTGGACATCTCCTATGTTCTGTTTCAACACCAGCATGTTTATCATTTGTCTTAAGATTTAACTTCTTTTGTGTGAAACAAATAATTAGGTTTGGGTTTATCTTCTGTCCTAACTGCCTGTATCCTCCAATGTATCATATGAATGTTGCTATTTGATGACAGGTTAGGGAGCCACTTCCTTTGATTATACACCATCTCCCTATTGCAGTAACCTTTGGTTTTTTTCGTAGTGAGAGCACTCTGGTAAGCTTAAGTTCTTTCAGTGTGTTGTATAAAGGCTCAGTTATATAGCAAGGTTCTCTAACTTTTAGATGATATGCAGGTGATAGATCCAACTCACTATGAAGAGGCTGTTATGGGGGGAAGAATGACCGTCACACTTAATGCTAATAATGATGTTTGTGCTATTCAAAAAGCTGGAGGGGAGGGTGTACTCCAGAGTGTGATCATGCAATGTCTACGAATTGCTTGTGTCAAAGCTGGTGATATTACGACTAAAATAAAAAATGCAGTGAGCTTCTTTTTTCTTATGCTTTTTTTATTTGGAGTTAACGTGAATTTTGCTTCTCTATAGTTCCATCTTGCTTAGGGAAAAATCATTATCTAGGATAAGAAACTGGCTTAAGGAAGGGCCTACAAAAAAGAATGGTCCACACAAAGGAGGAAAGAAAAAATGGATAACAAATTAAAAATGAAATAAATGAAAAAGGAACTACAAAACGAAATTAGAATACTCTAATTGTTAAGAATAATTAAAAAGAAAAAAAAGAGAGGATAGTTGTAAACCAGGCCAAACAAGAACACCTGGACTGGAGGGCATTGAAATGTGCGGTTGTTCCAAACCTAGAGGCATTCTCCTATCTATCTGGTCAATAAATTCTACAAAATAGTGAAAATGTCTCCTGCTAAATAAGTGCTGTTCCAAGGGAGGTAGATTTATGAGCACCTTCTCCACCCTGTCCTTACAACCTCTAATCATTTCCCTGATGGTGTGAGATTGTCTTTTTACTATTTCTTATTTTCTTGTTCTTTATTTTAGTTATGCTTTTGCTTTTGGGTTTTTATTAAAAAATGCTATAACCATCATCAAAATGAATACTTTTGAGAAATTTAAACTATTATTTCCTCGTTCTGATATTTTGTGGCTGGTGGTATATACAAGATCTCCCCTTTTACTCATTTCTACCACAACTTTATGTAGGTTGAGACTCACAATTCAGCTAGACAATTGCGTAAGATTAAGCGTCATCCTTCTGTTAATTTGGATGTTGGAGGTGCAGCTAATCTGAAGGATAGAAAAGGTATATCTGATGGACAAAAGAGTATCAATGAATTTTCTGACAGGTTGAAATTGAATTCTGAAGAGAGTATTGCCAGTCAAAGCGGGAGCATTGAGAGTGATGTTGTATCAACAAATCGAGGACAAATAAACAAGAGAGATTTAGATGCTAAGAATTTCATTGGGGGCCCTTCAAGCTGGTAAGGGTTCACTTTGATTATGATTACATTTCCTCGAGTTTCCACCATTATATGTCAACTTTTCTTATTTCTGAATTTGTTCTTCCCCAAAAGAAAATCTTAGGTGTTAAGTTTCTTAATCATTTCATACTTTGTATAGATATTTAGTGCAATCTTGTTAAGATTGACTCGTTCGTGGTTCCTACCCCCCTCCCCCCAACCTAAAATAATAATAATTGATACAGAGACCAGGTGAGTGTACACGCTACTGAAAGCATGGAAATATCATGCATACAAATACATGCCATCTGACAATGTTGGTTTCAGAATCTTTTTTTCTTTTTTTCTCAACCTCCATTTTATTTTTGCCAGGGATCCTTACTCCAAAGGCGTCGATTCGGATTTCTTGAAAGCTACCTTAGCTTCACGTGGTACTTCATCAATACTTTATAATTCCTCTTTTTGCTTTACGTTTTTTATATTATTTTCTGAAACAACAGTTACTTCATATCCATTTTTTCTGGGTAGTATATATATAAATGAAGAATGGATATTACCTTAATTAGTTTCAATATTATTGGTTGCTACTTAATTGGGCCACTGATGCAGGACAGCTTTAAAATCTTGTGGTTTATGGCTGTCTTGAGGAAGACTTGTTGGAATTATGGCTAGATTATTGTGAAGATAAGTTGCTTATTTGTGACAGCAATGCAGAAAAGTCATATAAAAGAGCAGGCAAGAAAGAACTACCATGAAGAGAGAGAAGTTATAGGCATAAGCACCTAATAGAATTTTTTATTGAGTCTTAATTTTGTTTGGTTGGAATATGCTTGAAAAGGCAGTTACCCGTTCCCTTGATGATTGTGAAATAAGATTTCTAAAGTGACCGGGAAATCTCTACATGCGTTATGATTTTGGAATAGTTAGTTTAAAGACTTTTTGAACAATAGGCTCCTACTTAGACTAGATCTTAGAAAGGCTAACTAAAGTTAGGATAAAACTAAAAGTAAAACATTATGGGAAAATCAACTCAAATCAGGATGGATGAAAATAAAAATTACTCCAGCCTCTCTTTGATATCTTTGAAATCGTACAACCTTACTTGAATAGGATCTGTTCTATAGGTTGTACATTTGTGTCCTTGAGTTCTAGGGAGACAAGATATCTTTGGAATCATGTACCTTTTCTGTTGGAGACTTTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGGACAAACTGTGAAAGAAATGGAAACACTATTTCTAACTTCATGATTATTGCTTAGGTGGTATGTCTATGTCAATAACAAAATATCTAAGCAAGCATCTTATCCAAAAAGGGGATTTCAACTGTATTTATTAAAACATATGCTTTCTTTGGCTTAGTTTCAATTTGGTCATCATATTATTTGCTCAGCCATAGCTTCCTACTTTCTATCTGATAATGATGGGAGTTCAATTTATGCACGTACTGTCGGATCAGGGAAATAAAGATGGAAATATTCCTTGATGCTTTTGCAGGCTTCAAGAATGAATAGAGTTCATCTTGACATATTTACTGCGTTCTTTGTCTTAATTTGGGTCTAAGCCTAACTTAAACCAAATACGCTAATAACATCCAGCAGTCAGAAAGTTCACTGTTTATAAAAATCAACTTGCAATCATTCTCTGTCACTCTTTGTGTGCACGAGGACAGAAGTTTTCTTTCAATCGACTAGTCTGGCTTTTCTGATGCTAGATTCTTGCAGGAAATCTAACCACGGCGAAGAAACAGGACATGAGTGATGAAATGATGTCGTCCGACACTAAGCTTGATGAACAAGCCGAGGATGATCAGGCAAATGTACCTCCTGTTGCTGCTAAAACTTCGCCAGAAGAAAATGGGAAGAAGACTCTGAAAGATGCCGTGAAGCCGAAAAATAAGAGGAAAAAGAAGAAGACGACCCCCAGTGTTGTAGATTAGTTCACTGGTGATAAGATCTTTTGGAAATGTATGTATGTTCTCGGGGTTGACCCATTCTTCGCAAGCCATGACCTTCAACATTCTTTTGCCTCAGGATTCTTCCATATATGTGTTTTAAGTTCTTTATTTTGCATTCTTTTGGCTTTTGAAAGTATCTCTTACAGATGCAAATTGCTTTTTATAGTTTCCTGGTGGAGGTGAATTTTGAAGCTCAACTTTGAAGTATTATGAAGGGATCAATTGAAGCAAGGAGAAGCATCTTTGGTCAAACGTGGACAACAAGTGACAATTCGTGCCAGGTTCGATTGATGCTCATTTGAAGAAATCCGAAACTTGAGCTTGTTGAGAAATCTGGATTTGGATCAATTCTTATCACTGAGAAATCTGTGATGCTGTTGGAAGAAAGGGCTATTATGCCAAGGACCTGCAATTTCAATCATGGCTCCTTATTTATTAATTTTTTTTTTTTTTGGAAAAGGAATCATGCTGCTTATTTAATCCTTAGGATCTTTTTTTTTTTTAGGAACACTTGGGATCTTTATTTAGAGTAACATGGAGCGTTTACTTTATACAGAATCTTAGGCTTTTTTCTTTTCTGATTGTAGATTTTTGGCTGCTGTACTCAGATGATTTTCAATATTGTTGAGAAAACTTCTTTTTCCCCTTCCATATTATATTGATTGTAAACTGTTTTCACAGAACATATAATAGGGAAGAAAAAT

mRNA sequence

TTCACGTCGTCTCCTCCTCCGTTTCAGCAGCTCAGTGTCGCCGCTGCTTGTCTCCCGTTCACTGCCGCCGCCACTGTCGTCCTTCTTCCGTTCGTGCCGCTGCAGCCTCCCTCCTGGCGGTTTTGCTCTGATTTTCTACTCTTTGTTGTTACTGGAAAAAGGGTGTACTAAATGGAGCAGAGATTAGCCAATGTATGGCGTCTCTCTGCGAACGAGAAGAAATTTATTGAAACAGCCCTTCTTTCGGATTTGAGGGTCGATGGTCGTCGCCCTTTTGATTATCGGAATATCACTATCAACTTTGGCAAGGATGATGGTTCTTCAGAGGTGCAGCTTGGCCATACTCATGTAATGGGTTTTGTGACTGCTCAGCTAGTTCAACCGTACAGGGATCGTCCTAATGAGGGCACTCTTTCTATATATACTGAGTTCTCTCCTATGGCTGATCCCTCATTTGAGCCCGGCCGTCCTGGAGAGTCTGCCGTTGAGTTAGGCCGCGTAATCGACCGTGGTCTGCGGGAGAGTAGGGCAGTGGATACAGAATCACTTTGTGTTGTTTCTGGCAAGTCTGTATGGGCCATCCGAGTTGACCTCCACATTCTAGATAATGGGGGAAACCTTGTGGATGCAGCTAATATTGCTGCTTTGGCTGCTCTCTCAACTTTCCGAAGGCCTGAGTGTTCACTAGGGGGAGATGATGATCAGGAAGTGATAGTTCATCCTCCTGAGGTTAGGGAGCCACTTCCTTTGATTATACACCATCTCCCTATTGCAGTAACCTTTGGTTTTTTTCGTAGTGAGAGCACTCTGGTGATAGATCCAACTCACTATGAAGAGGCTGTTATGGGGGGAAGAATGACCGTCACACTTAATGCTAATAATGATGTTTGTGCTATTCAAAAAGCTGGAGGGGAGGGTGTACTCCAGAGTGTGATCATGCAATGTCTACGAATTGCTTGTGTCAAAGCTGGTGATATTACGACTAAAATAAAAAATGCAGTTGAGACTCACAATTCAGCTAGACAATTGCGTAAGATTAAGCGTCATCCTTCTGTTAATTTGGATGTTGGAGGTGCAGCTAATCTGAAGGATAGAAAAGGTATATCTGATGGACAAAAGAGTATCAATGAATTTTCTGACAGGTTGAAATTGAATTCTGAAGAGAGTATTGCCAGTCAAAGCGGGAGCATTGAGAGTGATGTTGTATCAACAAATCGAGGACAAATAAACAAGAGAGATTTAGATGCTAAGAATTTCATTGGGGGCCCTTCAAGCTGGGATCCTTACTCCAAAGGCGTCGATTCGGATTTCTTGAAAGCTACCTTAGCTTCACGTGGAAATCTAACCACGGCGAAGAAACAGGACATGAGTGATGAAATGATGTCGTCCGACACTAAGCTTGATGAACAAGCCGAGGATGATCAGGCAAATGTACCTCCTGTTGCTGCTAAAACTTCGCCAGAAGAAAATGGGAAGAAGACTCTGAAAGATGCCGTGAAGCCGAAAAATAAGAGGAAAAAGAAGAAGACGACCCCCAGTGTTGTAGATTAGTTCACTGGTGATAAGATCTTTTGGAAATTTTCCTGGTGGAGGTGAATTTTGAAGCTCAACTTTGAAGTATTATGAAGGGATCAATTGAAGCAAGGAGAAGCATCTTTGGTCAAACGTGGACAACAAGTGACAATTCGTGCCAGGTTCGATTGATGCTCATTTGAAGAAATCCGAAACTTGAGCTTGTTGAGAAATCTGGATTTGGATCAATTCTTATCACTGAGAAATCTGTGATGCTGTTGGAAGAAAGGGCTATTATGCCAAGGACCTGCAATTTCAATCATGGCTCCTTATTTATTAATTTTTTTTTTTTTTGGAAAAGGAATCATGCTGCTTATTTAATCCTTAGGATCTTTTTTTTTTTTAGGAACACTTGGGATCTTTATTTAGAGTAACATGGAGCGTTTACTTTATACAGAATCTTAGGCTTTTTTCTTTTCTGATTGTAGATTTTTGGCTGCTGTACTCAGATGATTTTCAATATTGTTGAGAAAACTTCTTTTTCCCCTTCCATATTATATTGATTGTAAACTGTTTTCACAGAACATATAATAGGGAAGAAAAAT

Coding sequence (CDS)

ATGGAGCAGAGATTAGCCAATGTATGGCGTCTCTCTGCGAACGAGAAGAAATTTATTGAAACAGCCCTTCTTTCGGATTTGAGGGTCGATGGTCGTCGCCCTTTTGATTATCGGAATATCACTATCAACTTTGGCAAGGATGATGGTTCTTCAGAGGTGCAGCTTGGCCATACTCATGTAATGGGTTTTGTGACTGCTCAGCTAGTTCAACCGTACAGGGATCGTCCTAATGAGGGCACTCTTTCTATATATACTGAGTTCTCTCCTATGGCTGATCCCTCATTTGAGCCCGGCCGTCCTGGAGAGTCTGCCGTTGAGTTAGGCCGCGTAATCGACCGTGGTCTGCGGGAGAGTAGGGCAGTGGATACAGAATCACTTTGTGTTGTTTCTGGCAAGTCTGTATGGGCCATCCGAGTTGACCTCCACATTCTAGATAATGGGGGAAACCTTGTGGATGCAGCTAATATTGCTGCTTTGGCTGCTCTCTCAACTTTCCGAAGGCCTGAGTGTTCACTAGGGGGAGATGATGATCAGGAAGTGATAGTTCATCCTCCTGAGGTTAGGGAGCCACTTCCTTTGATTATACACCATCTCCCTATTGCAGTAACCTTTGGTTTTTTTCGTAGTGAGAGCACTCTGGTGATAGATCCAACTCACTATGAAGAGGCTGTTATGGGGGGAAGAATGACCGTCACACTTAATGCTAATAATGATGTTTGTGCTATTCAAAAAGCTGGAGGGGAGGGTGTACTCCAGAGTGTGATCATGCAATGTCTACGAATTGCTTGTGTCAAAGCTGGTGATATTACGACTAAAATAAAAAATGCAGTTGAGACTCACAATTCAGCTAGACAATTGCGTAAGATTAAGCGTCATCCTTCTGTTAATTTGGATGTTGGAGGTGCAGCTAATCTGAAGGATAGAAAAGGTATATCTGATGGACAAAAGAGTATCAATGAATTTTCTGACAGGTTGAAATTGAATTCTGAAGAGAGTATTGCCAGTCAAAGCGGGAGCATTGAGAGTGATGTTGTATCAACAAATCGAGGACAAATAAACAAGAGAGATTTAGATGCTAAGAATTTCATTGGGGGCCCTTCAAGCTGGGATCCTTACTCCAAAGGCGTCGATTCGGATTTCTTGAAAGCTACCTTAGCTTCACGTGGAAATCTAACCACGGCGAAGAAACAGGACATGAGTGATGAAATGATGTCGTCCGACACTAAGCTTGATGAACAAGCCGAGGATGATCAGGCAAATGTACCTCCTGTTGCTGCTAAAACTTCGCCAGAAGAAAATGGGAAGAAGACTCTGAAAGATGCCGTGAAGCCGAAAAATAAGAGGAAAAAGAAGAAGACGACCCCCAGTGTTGTAGATTAG

Protein sequence

MEQRLANVWRLSANEKKFIETALLSDLRVDGRRPFDYRNITINFGKDDGSSEVQLGHTHVMGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRAVDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDDQEVIVHPPEVREPLPLIIHHLPIAVTFGFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVCAIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVGGAANLKDRKGISDGQKSINEFSDRLKLNSEESIASQSGSIESDVVSTNRGQINKRDLDAKNFIGGPSSWDPYSKGVDSDFLKATLASRGNLTTAKKQDMSDEMMSSDTKLDEQAEDDQANVPPVAAKTSPEENGKKTLKDAVKPKNKRKKKKTTPSVVD

Homology

[Close]

BLAST of Lcy03g009080 vs. ExPASy Swiss-Prot
Match: Q9M209 (Exosome complex component RRP45B OS=Arabidopsis thaliana OX=3702 GN=RRP45B PE=2 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 1.0e-140
Identity = 273/458 (59.61%), Postives = 336/458 (73.36%), Query Frame = 0


Query: 1   MEQRLANVWRLSANEKKFIETALLSDLRVDGRRPFDYRNITINFGKDDGSSEVQLGHTHV 60
           ME RLAN+WRL+ NE KF+ETAL S+LRVDGR  +DYR +TI FGK+ GSSEVQLG THV
Sbjct: 1   MEGRLANMWRLTVNESKFVETALQSELRVDGRGLYDYRKLTIKFGKEYGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPY+DRPNEG+LSI+TEFSPMADPSFEPGRPGESAVELGR+IDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYKDRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA 120

Query: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDDQEV 180
           VDTESLCV++GK VW++R+DLHILDNGGNLVDAANIAALAAL TFRRP+C++GG++ QEV
Sbjct: 121 VDTESLCVLAGKMVWSVRIDLHILDNGGNLVDAANIAALAALMTFRRPDCTVGGENGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPIAVTFGFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HP E REPLPLIIHHLPIA TFGFF   + +V+DPT+ EEAVM GRMTVT+NAN D+C
Sbjct: 181 IIHPLEEREPLPLIIHHLPIAFTFGFFNKGNIVVMDPTYVEEAVMCGRMTVTVNANGDIC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSV-NLDV 300
           AIQK G EGV QSVI+ CLR+A  +A   T  I+  VE +N  R L+K+KRHP++   +V
Sbjct: 241 AIQKPGEEGVNQSVILHCLRLASSRAAATTKIIREEVEAYNCERSLQKVKRHPTLAKSEV 300

Query: 301 GG--AANLKDRKGISDGQKSI---NEFSDRLKLNSEESIASQSGSIESDVVSTNRGQINK 360
            G   A  ++ +  SD +++     E  +RLKL++EE  +S                   
Sbjct: 301 SGPTVAVKEEHRKSSDQERAAEISREHVERLKLSTEEVRSS------------------- 360

Query: 361 RDLDAKNFIGGPSSWDPYSKGVDSDFLKATLASRGNLTTAKKQDMSDEMMSSDTKLDEQA 420
           ++ +A NF GGPS+WDPYS+ +D D LK +LASRG+  T  K   + +M  S        
Sbjct: 361 KEEEAANFKGGPSNWDPYSEAMDVDSLKVSLASRGDPVT--KSSSTKKMNGSGNAQKVGV 420

Query: 421 EDDQANVP-PVAAKTSPEENGKKTLKDAVKPKNKRKKK 452
           E     V   +  K +  ++G+ TLKDAVKPK KRK K
Sbjct: 421 EISVEEVTGELGKKDTKHKDGEMTLKDAVKPKKKRKNK 437

[Close]

BLAST of Lcy03g009080 vs. ExPASy Swiss-Prot
Match: Q9LDM2 (Exosome complex component RRP45A OS=Arabidopsis thaliana OX=3702 GN=RRP45A PE=2 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 9.4e-123
Identity = 211/292 (72.26%), Postives = 249/292 (85.27%), Query Frame = 0


Query: 1   MEQRLANVWRLSANEKKFIETALLSDLRVDGRRPFDYRNITINFGKDDGSSEVQLGHTHV 60
           ME RL N+WRL+ NE KF+E+AL S+LRVDGR  +DYR +TI FGK+ GSS+VQLG THV
Sbjct: 1   MEGRLNNMWRLTVNESKFVESALQSELRVDGRGLYDYRKLTIKFGKEYGSSQVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           M FVTAQLVQPY+DRP+EG+ SI+TEFSPMADPSFEPG PGESAVELGR+IDR LRESRA
Sbjct: 61  MAFVTAQLVQPYKDRPSEGSFSIFTEFSPMADPSFEPGHPGESAVELGRIIDRALRESRA 120

Query: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDDQEV 180
           VDTESLCV++GK VW++R+DLHILDNGGNLVDAAN+AALAAL TFRRP+C++GGD+ Q+V
Sbjct: 121 VDTESLCVLAGKLVWSVRIDLHILDNGGNLVDAANVAALAALMTFRRPDCTVGGDNSQDV 180

Query: 181 IVHPPEVREPLPLIIHHLPIAVTFGFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HPPE REPLPLIIHHLPIA TFGFF   S LV+DPT+ EEAVM GRMTVT+NAN D+C
Sbjct: 181 IIHPPEEREPLPLIIHHLPIAFTFGFFNKGSILVMDPTYVEEAVMCGRMTVTVNANGDIC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRH 293
           AIQK G EGV QSVI+ CLR+A  +A   T  I++AVE +N  R  +K+KRH
Sbjct: 241 AIQKPGEEGVNQSVILHCLRLASSRASATTKIIRDAVEAYNRERSSQKVKRH 292

[Close]

BLAST of Lcy03g009080 vs. ExPASy Swiss-Prot
Match: Q06265 (Exosome complex component RRP45 OS=Homo sapiens OX=9606 GN=EXOSC9 PE=1 SV=3)

HSP 1 Score: 260.8 bits (665), Expect = 3.0e-68
Identity = 128/275 (46.55%), Postives = 186/275 (67.64%), Query Frame = 0


Query: 11  LSANEKKFIETALLSDLRVDGRRPFDYRNITINFGKDDGSSEVQLGHTHVMGFVTAQLVQ 70
           LS  E++F+  A+    R+DGR+ +DYRNI I+FG D G   V+LG T V+G V+ +LV 
Sbjct: 6   LSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVSCELVS 65

Query: 71  PYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRAVDTESLCVVS 130
           P  +R  EG L    E S MA P+FEPGR  +  V+L R+++R LR S+ +DTESLCVV+
Sbjct: 66  PKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVA 125

Query: 131 GKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDDQEVIVHPPEVREP 190
           G+ VW IRVDLH+L++ GN++DAA+IAA+ AL  FRRP+ S+ GD   EV ++ PE R+P
Sbjct: 126 GEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGD---EVTLYTPEERDP 185

Query: 191 LPLIIHHLPIAVTFGFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVCAIQKAGGEGV 250
           +PL IHH+PI V+F FF+  + L++DP   EE VM G + + +N + ++C IQ +GG  +
Sbjct: 186 VPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGIML 245

Query: 251 LQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQ 286
           L+  +++C +IA VK  +IT  I  A+E     R+
Sbjct: 246 LKDQVLRCSKIAGVKVAEITELILKALENDQKVRK 277

[Close]

BLAST of Lcy03g009080 vs. ExPASy Swiss-Prot
Match: Q9JHI7 (Exosome complex component RRP45 OS=Mus musculus OX=10090 GN=Exosc9 PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 6.6e-68
Identity = 127/275 (46.18%), Postives = 186/275 (67.64%), Query Frame = 0


Query: 11  LSANEKKFIETALLSDLRVDGRRPFDYRNITINFGKDDGSSEVQLGHTHVMGFVTAQLVQ 70
           LS  E++F+  A+    R+DGR+ +DYRNI I+FG D G   V+LG T V+G V+ +LV 
Sbjct: 6   LSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVSCELVS 65

Query: 71  PYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRAVDTESLCVVS 130
           P  +R  EG L    E S MA P+FEPGR  +  V+L R+++R LR S+ +DTESLCVV+
Sbjct: 66  PKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVA 125

Query: 131 GKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDDQEVIVHPPEVREP 190
           G+ VW IRVDLH+L++ GN++DAA+IAA+ AL  FRRP+ S+ G   +EV ++ PE R+P
Sbjct: 126 GEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQG---EEVTLYTPEERDP 185

Query: 191 LPLIIHHLPIAVTFGFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVCAIQKAGGEGV 250
           +PL IHH+PI V+F FF+  + L++DP   EE VM G + + +N + ++C IQ +GG  +
Sbjct: 186 VPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGIML 245

Query: 251 LQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQ 286
           L+  + +C +IA VK  +IT  I+ A+E     R+
Sbjct: 246 LKDQVFRCSKIAGVKVAEITELIQKALENDQRVRK 277

[Close]

BLAST of Lcy03g009080 vs. ExPASy Swiss-Prot
Match: Q4QR75 (Exosome complex component RRP45 OS=Rattus norvegicus OX=10116 GN=Exosc9 PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 6.6e-68
Identity = 127/275 (46.18%), Postives = 186/275 (67.64%), Query Frame = 0


Query: 11  LSANEKKFIETALLSDLRVDGRRPFDYRNITINFGKDDGSSEVQLGHTHVMGFVTAQLVQ 70
           LS  E++F+  A+    R+DGR+ +DYRNI I+FG D G   V+LG T V+G V+ +LV 
Sbjct: 6   LSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVSCELVS 65

Query: 71  PYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRAVDTESLCVVS 130
           P  +R  EG L    E S MA P+FEPGR  +  V+L R+++R LR S+ +DTESLCVV+
Sbjct: 66  PKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLLERCLRNSKCIDTESLCVVA 125

Query: 131 GKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDDQEVIVHPPEVREP 190
           G+ VW IRVDLH+L++ GN++DAA+IAA+ AL  FRRP+ S+ G   +EV ++ PE R+P
Sbjct: 126 GEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQG---EEVTLYTPEERDP 185

Query: 191 LPLIIHHLPIAVTFGFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVCAIQKAGGEGV 250
           +PL IHH+PI V+F FF+  + L++DP   EE VM G + + +N + ++C IQ +GG  +
Sbjct: 186 VPLSIHHMPICVSFAFFQQGTYLLVDPNEREERVMDGLLVIAMNKHREICTIQSSGGIML 245

Query: 251 LQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQ 286
           L+  + +C +IA VK  +IT  I+ A+E     R+
Sbjct: 246 LKDQVFRCSKIAGVKVAEITELIQKALENDQRVRK 277

[Close]

BLAST of Lcy03g009080 vs. ExPASy TrEMBL
Match: A0A6J1JG94 (exosome complex component RRP45A-like OS=Cucurbita maxima OX=3661 GN=LOC111485448 PE=3 SV=1)

HSP 1 Score: 805.1 bits (2078), Expect = 1.6e-229
Identity = 417/462 (90.26%), Postives = 436/462 (94.37%), Query Frame = 0


Query: 1   MEQRLANVWRLSANEKKFIETALLSDLRVDGRRPFDYRNITINFGKDDGSSEVQLGHTHV 60
           MEQRLAN WRLSANEKKFIETALLSDLRVDGRRPFDYRN+TINFGKDDGS+EVQLG TH 
Sbjct: 1   MEQRLANAWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSTEVQLGQTHA 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDRPNEGTLSI+TEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIFTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDDQEV 180
           VD ESLCVVSGKSVWA+RVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDD QEV
Sbjct: 121 VDMESLCVVSGKSVWAVRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPIAVTFGFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HPPEVREPLPLIIHHLPIAVTF FFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IIHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG 300
           AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVET+NSARQLRKIK HPSVNLDVG
Sbjct: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETYNSARQLRKIKHHPSVNLDVG 300

Query: 301 GA-ANLKDRKGISDGQKSINEFSDRLKLNSEESIASQSGSIESDVVSTNRGQINKRDLDA 360
            A AN KD +G+SD QKSINEFSDRLKLNSEE+IA QS SIESDV STN+GQ+NKRDLDA
Sbjct: 301 RAVANPKDSQGVSDDQKSINEFSDRLKLNSEENIAGQSRSIESDVGSTNQGQLNKRDLDA 360

Query: 361 KNFIGGPSSWDPYSKGVDSDFLKATLASRGNLTTAKKQDMSDEMMSSDTKLDEQ-AEDDQ 420
           KNFIGGPSSWDPYSKGVDSDFLKATLA+RGN TT KKQD+SDE MSS+TKLDEQ A+ D+
Sbjct: 361 KNFIGGPSSWDPYSKGVDSDFLKATLAARGNQTTTKKQDVSDETMSSETKLDEQEAKVDE 420

Query: 421 ANVPPVAAKTSPEENGKKTLKDAVKPKNKRKKKKTT-PSVVD 460
           AN+PPVAAK   EEN KKTLKDAVKPKNKRKKKKTT P++ D
Sbjct: 421 ANLPPVAAKILSEENEKKTLKDAVKPKNKRKKKKTTIPNIAD 462

[Close]

BLAST of Lcy03g009080 vs. ExPASy TrEMBL
Match: A0A6J1HA43 (exosome complex component RRP45A-like OS=Cucurbita moschata OX=3662 GN=LOC111461486 PE=3 SV=1)

HSP 1 Score: 793.9 bits (2049), Expect = 3.6e-226
Identity = 414/463 (89.42%), Postives = 431/463 (93.09%), Query Frame = 0


Query: 1   MEQRLANVWRLSANEKKFIETALLSDLRVDGRRPFDYRNITINFGKDDGSSEVQLGHTHV 60
           MEQRLAN WRLSANEKKFIETALLSDLRVDGRRPFDYRN+TINFGKDDGSSEVQLG TH 
Sbjct: 1   MEQRLANAWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHA 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDRPNEGTLSI+TEFSPMADPSFEPGRPGESA+ELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIFTEFSPMADPSFEPGRPGESAIELGRVIDRGLRESRA 120

Query: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDDQEV 180
           VD ESLCVVSGKSVWA+RVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDD QEV
Sbjct: 121 VDMESLCVVSGKSVWAVRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPIAVTFGFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HPPEVREPLPLIIHHLPIAVTF FFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IIHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG 300
           AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVET+NSARQLRKIKRHPSVNLDVG
Sbjct: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETYNSARQLRKIKRHPSVNLDVG 300

Query: 301 GA-ANLKDRKGISDGQKSINEFSDRLKLNSEESIASQSGSIESDVVSTNRGQINKRDLDA 360
            A AN+K      D QKSINEFSDRLKLNSE+SIA QS SIESDV STN+GQ+NKRDLDA
Sbjct: 301 RAVANMK------DSQKSINEFSDRLKLNSEDSIAGQSRSIESDVGSTNQGQLNKRDLDA 360

Query: 361 KNFIGGPSSWDPYSKGVDSDFLKATLASRGNLTTAKKQDMSDEMMSSDTKLDEQ-AEDDQ 420
           KNFIGGPSSWDPYSKGVDSDFLKATLA+RGN TT KKQD SDE MSS+TKLDEQ A+ D+
Sbjct: 361 KNFIGGPSSWDPYSKGVDSDFLKATLAARGNQTTTKKQDASDETMSSETKLDEQEAKVDE 420

Query: 421 ANVPPVAAKTSPEENGKKTLKDAVKPKNKRKKKKTT--PSVVD 460
            N+PPVAAK   EEN KKTLKDAVKPKNKRKKKKTT  P++ D
Sbjct: 421 GNLPPVAAKILSEENEKKTLKDAVKPKNKRKKKKTTIPPNIAD 457

[Close]

BLAST of Lcy03g009080 vs. ExPASy TrEMBL
Match: A0A6J1DLD8 (exosome complex component RRP45A isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021616 PE=3 SV=1)

HSP 1 Score: 782.7 bits (2020), Expect = 8.3e-223
Identity = 410/464 (88.36%), Postives = 432/464 (93.10%), Query Frame = 0


Query: 1   MEQRLANVWRLSANEKKFIETALLSDLRVDGRRPFDYRNITINFGKDDGSSEVQLGHTHV 60
           ME RLAN WRLSANEKKFIETALLSDLRVDGRRPFDYRN+TINFGKDDGSSEVQLG THV
Sbjct: 1   MEHRLANAWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDDQEV 180
           VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSL GDD QEV
Sbjct: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLEGDDGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPIAVTFGFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           IVHPPEVREPLPLIIHHLPIAVTF FFRSESTLV+DPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IVHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVVDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG 300
           AIQKAGGEGVLQS+IMQCLRIA VKAGDITTKIKNAVET+NSARQLRKIKRHPSVNLDVG
Sbjct: 241 AIQKAGGEGVLQSMIMQCLRIASVKAGDITTKIKNAVETYNSARQLRKIKRHPSVNLDVG 300

Query: 301 ----GAANLKDRKGISDGQKSINEFSDRLKLNSEESIASQSGSIESDVVSTNRGQINKRD 360
               G AN+K+ +G+SDGQKSINEFSDRLKLNS+ES+ASQSGS ESD+VSTN+GQI KRD
Sbjct: 301 GGVAGVANMKNSQGVSDGQKSINEFSDRLKLNSQESMASQSGSTESDIVSTNQGQIIKRD 360

Query: 361 LDAKNFIGGPSSWDPYSKGVDSDFLKATLASRGNLTTAKKQ-DMSDEMMSSDTKLDEQAE 420
           LDAKNFIGGPSSWDPYSKGVDSD+LK+TLASRGN T  KKQ D S E MSS+ +L EQ +
Sbjct: 361 LDAKNFIGGPSSWDPYSKGVDSDYLKSTLASRGNPTMMKKQKDSSVETMSSE-ELGEQVK 420

Query: 421 DDQANVPPVAAKTSPEENGKKTLKDAVKPKNKRKKKKTTPSVVD 460
           D+QA++P  AAKT  EEN KKTLKDAVKPKNKR KKK+TP+V D
Sbjct: 421 DNQADLPLAAAKTLSEENRKKTLKDAVKPKNKR-KKKSTPNVAD 462

[Close]

BLAST of Lcy03g009080 vs. ExPASy TrEMBL
Match: A0A0A0M072 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G615210 PE=3 SV=1)

HSP 1 Score: 756.9 bits (1953), Expect = 4.9e-215
Identity = 395/459 (86.06%), Postives = 420/459 (91.50%), Query Frame = 0


Query: 1   MEQRLANVWRLSANEKKFIETALLSDLRVDGRRPFDYRNITINFGKDDGSSEVQLGHTHV 60
           MEQRLAN WRLSANEKKFIETALLSDLRVDGR PFDYRN+TINFGKDDGSSEVQLG THV
Sbjct: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRGPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDDQEV 180
           VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAAN+AALAALSTFRRPECSL GDD QEV
Sbjct: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANVAALAALSTFRRPECSLSGDDGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPIAVTFGFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           IVHPPEVREPLPLIIHHLPIAVTF FFRSES LVIDPTH EEAVMGGRMTVTLNANNDVC
Sbjct: 181 IVHPPEVREPLPLIIHHLPIAVTFAFFRSESILVIDPTHCEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDV- 300
           AIQKAGGEGVL+SVIMQCLRIA VKAGDITTKIKNAVET++SARQLRKIKRHPSVNLDV 
Sbjct: 241 AIQKAGGEGVLKSVIMQCLRIASVKAGDITTKIKNAVETYSSARQLRKIKRHPSVNLDVG 300

Query: 301 GGAANLKDRKGISDGQKSINEFSDRLKLNSEESIASQSGSIESDVVSTNRGQINKRDLDA 360
           GG  +LKD +GISDGQKSIN+         +ES+ SQSGSI++D  STN+GQ++KRD DA
Sbjct: 301 GGTGSLKDSQGISDGQKSIND---------QESVVSQSGSIKND-ASTNQGQLDKRDSDA 360

Query: 361 KNFIGGPSSWDPYSKGVDSDFLKATLASRGNLTTAKKQDMSDEMMSSDTKLDEQ-AEDDQ 420
           KNFIGGPS WDP+SKG DSDFLKATLASRGNLT  KK+D+SDEMMSS++ +DEQ A+ D+
Sbjct: 361 KNFIGGPSCWDPHSKGADSDFLKATLASRGNLTATKKEDLSDEMMSSESMVDEQEAKVDE 420

Query: 421 ANVPPVAAKTSPEENGKKTLKDAVKPKNKRKKKKTTPSV 458
            N+ PVAAKT  EENGKKTLKDAVKPKNKRKKKKTT  +
Sbjct: 421 VNLSPVAAKTLSEENGKKTLKDAVKPKNKRKKKKTTTPI 449

[Close]

BLAST of Lcy03g009080 vs. ExPASy TrEMBL
Match: A0A1S3BP69 (exosome complex component RRP45A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492017 PE=3 SV=1)

HSP 1 Score: 747.7 bits (1929), Expect = 3.0e-212
Identity = 394/456 (86.40%), Postives = 417/456 (91.45%), Query Frame = 0


Query: 1   MEQRLANVWRLSANEKKFIETALLSDLRVDGRRPFDYRNITINFGKDDGSSEVQLGHTHV 60
           MEQRLAN WRLS NEKKFIETALLSDLRVDGR PFDYRN+TINFGKDDGSSEVQLG THV
Sbjct: 1   MEQRLANTWRLSVNEKKFIETALLSDLRVDGRCPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDDQEV 180
           VD ESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSL GDD QEV
Sbjct: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLSGDDGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPIAVTFGFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           IVHPPEVREPLPLIIHHLPIAVTF FFRSES LVIDPTH EEAVMGGRMTVTLNANNDVC
Sbjct: 181 IVHPPEVREPLPLIIHHLPIAVTFAFFRSESILVIDPTHCEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDV- 300
           AIQKAGGEGVL+SVIMQCLRIA VKAGDITTKIKNAVET++SARQLRKIKRHPSVNLDV 
Sbjct: 241 AIQKAGGEGVLKSVIMQCLRIASVKAGDITTKIKNAVETYSSARQLRKIKRHPSVNLDVG 300

Query: 301 GGAANLKDRKGISDGQKSINEFSDRLKLNSEESIASQSGSIESDVVSTNRGQINKRDLDA 360
           GGA +LKD +GISDG+KSIN+         +ESI SQSGSI++D  STN+GQ++KRD DA
Sbjct: 301 GGAGSLKDSQGISDGEKSIND---------QESIVSQSGSIKND-ESTNQGQLDKRDFDA 360

Query: 361 KNFIGGPSSWDPYSKGVDSDFLKATLASRGNLTTAKKQDMSDEMMSSDTKLDEQ-AEDDQ 420
           KNFIGGPS WDP+SKGVDS+FLKATLASRGNLT  KK+DMSDEMMSS++ +DEQ A+  +
Sbjct: 361 KNFIGGPSCWDPHSKGVDSNFLKATLASRGNLTAMKKEDMSDEMMSSESMVDEQEAKVGE 420

Query: 421 ANVPPVAAKTSPEENGKKTLKDAVKPKNKRKKKKTT 455
            N+ PVAAKT  EENGKKTLKDAVK KNKRKKKKTT
Sbjct: 421 VNLSPVAAKTLSEENGKKTLKDAVKRKNKRKKKKTT 446

[Close]

BLAST of Lcy03g009080 vs. NCBI nr
Match: XP_022988100.1 (exosome complex component RRP45A-like [Cucurbita maxima] >XP_022988101.1 exosome complex component RRP45A-like [Cucurbita maxima])

HSP 1 Score: 805.1 bits (2078), Expect = 3.2e-229
Identity = 417/462 (90.26%), Postives = 436/462 (94.37%), Query Frame = 0


Query: 1   MEQRLANVWRLSANEKKFIETALLSDLRVDGRRPFDYRNITINFGKDDGSSEVQLGHTHV 60
           MEQRLAN WRLSANEKKFIETALLSDLRVDGRRPFDYRN+TINFGKDDGS+EVQLG TH 
Sbjct: 1   MEQRLANAWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSTEVQLGQTHA 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDRPNEGTLSI+TEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIFTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDDQEV 180
           VD ESLCVVSGKSVWA+RVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDD QEV
Sbjct: 121 VDMESLCVVSGKSVWAVRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPIAVTFGFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HPPEVREPLPLIIHHLPIAVTF FFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IIHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG 300
           AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVET+NSARQLRKIK HPSVNLDVG
Sbjct: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETYNSARQLRKIKHHPSVNLDVG 300

Query: 301 GA-ANLKDRKGISDGQKSINEFSDRLKLNSEESIASQSGSIESDVVSTNRGQINKRDLDA 360
            A AN KD +G+SD QKSINEFSDRLKLNSEE+IA QS SIESDV STN+GQ+NKRDLDA
Sbjct: 301 RAVANPKDSQGVSDDQKSINEFSDRLKLNSEENIAGQSRSIESDVGSTNQGQLNKRDLDA 360

Query: 361 KNFIGGPSSWDPYSKGVDSDFLKATLASRGNLTTAKKQDMSDEMMSSDTKLDEQ-AEDDQ 420
           KNFIGGPSSWDPYSKGVDSDFLKATLA+RGN TT KKQD+SDE MSS+TKLDEQ A+ D+
Sbjct: 361 KNFIGGPSSWDPYSKGVDSDFLKATLAARGNQTTTKKQDVSDETMSSETKLDEQEAKVDE 420

Query: 421 ANVPPVAAKTSPEENGKKTLKDAVKPKNKRKKKKTT-PSVVD 460
           AN+PPVAAK   EEN KKTLKDAVKPKNKRKKKKTT P++ D
Sbjct: 421 ANLPPVAAKILSEENEKKTLKDAVKPKNKRKKKKTTIPNIAD 462

[Close]

BLAST of Lcy03g009080 vs. NCBI nr
Match: XP_038879556.1 (exosome complex component RRP45A-like isoform X1 [Benincasa hispida] >XP_038879557.1 exosome complex component RRP45A-like isoform X1 [Benincasa hispida] >XP_038879558.1 exosome complex component RRP45A-like isoform X1 [Benincasa hispida])

HSP 1 Score: 798.1 bits (2060), Expect = 3.9e-227
Identity = 414/454 (91.19%), Postives = 430/454 (94.71%), Query Frame = 0


Query: 1   MEQRLANVWRLSANEKKFIETALLSDLRVDGRRPFDYRNITINFGKDDGSSEVQLGHTHV 60
           MEQRLAN WRLSANEKKFIETALLSDLRVDGRRPFDYRN+TINFGKDDGSSEVQLG THV
Sbjct: 1   MEQRLANTWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQ+VQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQIVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDDQEV 180
           VD ESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDD QEV
Sbjct: 121 VDMESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPIAVTFGFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           IVHPPEVREPLPLIIHHLPIAVTF FFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IVHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG 300
           AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG
Sbjct: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG 300

Query: 301 -GAANLKDRKGISDGQKSINEFSDRLKLNSEESIASQSGSIESDVVSTNRGQINKRDLDA 360
            GAANLK  +GISDG+KSIN+ SDRLKLNSEESIAS S SI+SD VSTN+GQ+NKRD DA
Sbjct: 301 EGAANLKHSQGISDGRKSINDVSDRLKLNSEESIASPSRSIKSD-VSTNQGQLNKRDFDA 360

Query: 361 KNFIGGPSSWDPYSKGVDSDFLKATLASRGNLTTAKKQDMSDEMMSSDTKLDEQ-AEDDQ 420
           KNFIGGPS WDPYSKGVDSDFLKATLASRGNLT  KK++ SDEMMSS+T++DEQ  + DQ
Sbjct: 361 KNFIGGPSCWDPYSKGVDSDFLKATLASRGNLTVTKKENPSDEMMSSETEVDEQETKVDQ 420

Query: 421 ANVPPVAAKTSPEENGKKTLKDAVKPKNKRKKKK 453
            N+PP AAKT  E+NGKKTLKDAVKPKNKRKKKK
Sbjct: 421 TNLPPAAAKTLSEDNGKKTLKDAVKPKNKRKKKK 453

[Close]

BLAST of Lcy03g009080 vs. NCBI nr
Match: KAG7023846.1 (Exosome complex component RRP45B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 795.8 bits (2054), Expect = 2.0e-226
Identity = 416/462 (90.04%), Postives = 431/462 (93.29%), Query Frame = 0


Query: 1   MEQRLANVWRLSANEKKFIETALLSDLRVDGRRPFDYRNITINFGKDDGSSEVQLGHTHV 60
           MEQRLAN WRLSANEKKFIETALLSDLRVDGRRPFDYRN+TINFGKDDGSSEVQLG TH 
Sbjct: 1   MEQRLANAWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHA 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDRPNEGTLSI+TEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIFTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDDQEV 180
           VD ESLCVVSGKSVWA+RVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDD QEV
Sbjct: 121 VDMESLCVVSGKSVWAVRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPIAVTFGFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HPPEVREPLPLIIHHLPIAVTF FFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IIHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG 300
           AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVET+NSARQLRKIKRHPSVNLDVG
Sbjct: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETYNSARQLRKIKRHPSVNLDVG 300

Query: 301 GA-ANLKDRKGISDGQKSINEFSDRLKLNSEESIASQSGSIESDVVSTNRGQINKRDLDA 360
            A AN+K      D QKSINEFSDRLKLNSEESIA QS SIESDV STN+GQ+NKRDLDA
Sbjct: 301 RAVANMK------DSQKSINEFSDRLKLNSEESIAGQSRSIESDVGSTNQGQLNKRDLDA 360

Query: 361 KNFIGGPSSWDPYSKGVDSDFLKATLASRGNLTTAKKQDMSDEMMSSDTKLDEQ-AEDDQ 420
           KNFIGGPSSWDPYSKGVDSDFLKATLA+RGN TT KKQD SDE MSS+TKLDEQ A+ D+
Sbjct: 361 KNFIGGPSSWDPYSKGVDSDFLKATLAARGNQTTTKKQDASDETMSSETKLDEQEAKVDE 420

Query: 421 ANVPPVAAKTSPEENGKKTLKDAVKPKNKRKKKKTT-PSVVD 460
            N+PPVAAK   EEN KKTLKDAVKPKNKRKKKKTT P++ D
Sbjct: 421 GNLPPVAAKILSEENEKKTLKDAVKPKNKRKKKKTTIPNIAD 456

[Close]

BLAST of Lcy03g009080 vs. NCBI nr
Match: KAG6590195.1 (Exosome complex component RRP45B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 795.4 bits (2053), Expect = 2.6e-226
Identity = 416/463 (89.85%), Postives = 431/463 (93.09%), Query Frame = 0


Query: 1   MEQRLANVWRLSANEKKFIETALLSDLRVDGRRPFDYRNITINFGKDDGSSEVQLGHTHV 60
           MEQRLAN WRLSANEKKFIETALLSDLRVDGRRPFDYRN+TINFGKDDGSSEVQLG TH 
Sbjct: 1   MEQRLANAWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHA 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDRPNEGTLSI+TEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIFTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDDQEV 180
           VD ESLCVVSGKSVWA+RVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDD QEV
Sbjct: 121 VDMESLCVVSGKSVWAVRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPIAVTFGFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HPPEVREPLPLIIHHLPIAVTF FFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IIHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG 300
           AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVET+NSARQLRKIKRHPSVNLDVG
Sbjct: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETYNSARQLRKIKRHPSVNLDVG 300

Query: 301 GA-ANLKDRKGISDGQKSINEFSDRLKLNSEESIASQSGSIESDVVSTNRGQINKRDLDA 360
            A AN+K      D QKSINEFSDRLKLNSEESIA QS SIESDV STN+GQ+NKRDLDA
Sbjct: 301 RAVANMK------DSQKSINEFSDRLKLNSEESIAGQSRSIESDVGSTNQGQLNKRDLDA 360

Query: 361 KNFIGGPSSWDPYSKGVDSDFLKATLASRGNLTTAKKQDMSDEMMSSDTKLDEQ-AEDDQ 420
           KNFIGGPSSWDPYSKGVDSDFLKATLA+RGN TT KKQD SDE MSS+TKLDEQ A+ D+
Sbjct: 361 KNFIGGPSSWDPYSKGVDSDFLKATLAARGNQTTTKKQDASDETMSSETKLDEQEAKVDE 420

Query: 421 ANVPPVAAKTSPEENGKKTLKDAVKPKNKRKKKKTT--PSVVD 460
            N+PPVAAK   EEN KKTLKDAVKPKNKRKKKKTT  P++ D
Sbjct: 421 GNLPPVAAKILSEENEKKTLKDAVKPKNKRKKKKTTIPPNIAD 457

[Close]

BLAST of Lcy03g009080 vs. NCBI nr
Match: XP_022960790.1 (exosome complex component RRP45A-like [Cucurbita moschata])

HSP 1 Score: 793.9 bits (2049), Expect = 7.4e-226
Identity = 414/463 (89.42%), Postives = 431/463 (93.09%), Query Frame = 0


Query: 1   MEQRLANVWRLSANEKKFIETALLSDLRVDGRRPFDYRNITINFGKDDGSSEVQLGHTHV 60
           MEQRLAN WRLSANEKKFIETALLSDLRVDGRRPFDYRN+TINFGKDDGSSEVQLG TH 
Sbjct: 1   MEQRLANAWRLSANEKKFIETALLSDLRVDGRRPFDYRNLTINFGKDDGSSEVQLGQTHA 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPYRDRPNEGTLSI+TEFSPMADPSFEPGRPGESA+ELGRVIDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYRDRPNEGTLSIFTEFSPMADPSFEPGRPGESAIELGRVIDRGLRESRA 120

Query: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDDQEV 180
           VD ESLCVVSGKSVWA+RVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDD QEV
Sbjct: 121 VDMESLCVVSGKSVWAVRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPIAVTFGFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HPPEVREPLPLIIHHLPIAVTF FFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC
Sbjct: 181 IIHPPEVREPLPLIIHHLPIAVTFAFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSVNLDVG 300
           AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVET+NSARQLRKIKRHPSVNLDVG
Sbjct: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETYNSARQLRKIKRHPSVNLDVG 300

Query: 301 GA-ANLKDRKGISDGQKSINEFSDRLKLNSEESIASQSGSIESDVVSTNRGQINKRDLDA 360
            A AN+K      D QKSINEFSDRLKLNSE+SIA QS SIESDV STN+GQ+NKRDLDA
Sbjct: 301 RAVANMK------DSQKSINEFSDRLKLNSEDSIAGQSRSIESDVGSTNQGQLNKRDLDA 360

Query: 361 KNFIGGPSSWDPYSKGVDSDFLKATLASRGNLTTAKKQDMSDEMMSSDTKLDEQ-AEDDQ 420
           KNFIGGPSSWDPYSKGVDSDFLKATLA+RGN TT KKQD SDE MSS+TKLDEQ A+ D+
Sbjct: 361 KNFIGGPSSWDPYSKGVDSDFLKATLAARGNQTTTKKQDASDETMSSETKLDEQEAKVDE 420

Query: 421 ANVPPVAAKTSPEENGKKTLKDAVKPKNKRKKKKTT--PSVVD 460
            N+PPVAAK   EEN KKTLKDAVKPKNKRKKKKTT  P++ D
Sbjct: 421 GNLPPVAAKILSEENEKKTLKDAVKPKNKRKKKKTTIPPNIAD 457

[Close]

BLAST of Lcy03g009080 vs. TAIR 10
Match: AT3G60500.1 (3'-5'-exoribonuclease family protein )

HSP 1 Score: 501.5 bits (1290), Expect = 7.1e-142
Identity = 273/458 (59.61%), Postives = 336/458 (73.36%), Query Frame = 0


Query: 1   MEQRLANVWRLSANEKKFIETALLSDLRVDGRRPFDYRNITINFGKDDGSSEVQLGHTHV 60
           ME RLAN+WRL+ NE KF+ETAL S+LRVDGR  +DYR +TI FGK+ GSSEVQLG THV
Sbjct: 1   MEGRLANMWRLTVNESKFVETALQSELRVDGRGLYDYRKLTIKFGKEYGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPY+DRPNEG+LSI+TEFSPMADPSFEPGRPGESAVELGR+IDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYKDRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA 120

Query: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDDQEV 180
           VDTESLCV++GK VW++R+DLHILDNGGNLVDAANIAALAAL TFRRP+C++GG++ QEV
Sbjct: 121 VDTESLCVLAGKMVWSVRIDLHILDNGGNLVDAANIAALAALMTFRRPDCTVGGENGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPIAVTFGFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HP E REPLPLIIHHLPIA TFGFF   + +V+DPT+ EEAVM GRMTVT+NAN D+C
Sbjct: 181 IIHPLEEREPLPLIIHHLPIAFTFGFFNKGNIVVMDPTYVEEAVMCGRMTVTVNANGDIC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSV-NLDV 300
           AIQK G EGV QSVI+ CLR+A  +A   T  I+  VE +N  R L+K+KRHP++   +V
Sbjct: 241 AIQKPGEEGVNQSVILHCLRLASSRAAATTKIIREEVEAYNCERSLQKVKRHPTLAKSEV 300

Query: 301 GG--AANLKDRKGISDGQKSI---NEFSDRLKLNSEESIASQSGSIESDVVSTNRGQINK 360
            G   A  ++ +  SD +++     E  +RLKL++EE  +S                   
Sbjct: 301 SGPTVAVKEEHRKSSDQERAAEISREHVERLKLSTEEVRSS------------------- 360

Query: 361 RDLDAKNFIGGPSSWDPYSKGVDSDFLKATLASRGNLTTAKKQDMSDEMMSSDTKLDEQA 420
           ++ +A NF GGPS+WDPYS+ +D D LK +LASRG+  T  K   + +M  S        
Sbjct: 361 KEEEAANFKGGPSNWDPYSEAMDVDSLKVSLASRGDPVT--KSSSTKKMNGSGNAQKVGV 420

Query: 421 EDDQANVP-PVAAKTSPEENGKKTLKDAVKPKNKRKKK 452
           E     V   +  K +  ++G+ TLKDAVKPK KRK K
Sbjct: 421 EISVEEVTGELGKKDTKHKDGEMTLKDAVKPKKKRKNK 437

[Close]

BLAST of Lcy03g009080 vs. TAIR 10
Match: AT3G60500.2 (3'-5'-exoribonuclease family protein )

HSP 1 Score: 501.5 bits (1290), Expect = 7.1e-142
Identity = 273/458 (59.61%), Postives = 336/458 (73.36%), Query Frame = 0


Query: 1   MEQRLANVWRLSANEKKFIETALLSDLRVDGRRPFDYRNITINFGKDDGSSEVQLGHTHV 60
           ME RLAN+WRL+ NE KF+ETAL S+LRVDGR  +DYR +TI FGK+ GSSEVQLG THV
Sbjct: 1   MEGRLANMWRLTVNESKFVETALQSELRVDGRGLYDYRKLTIKFGKEYGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPY+DRPNEG+LSI+TEFSPMADPSFEPGRPGESAVELGR+IDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYKDRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA 120

Query: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDDQEV 180
           VDTESLCV++GK VW++R+DLHILDNGGNLVDAANIAALAAL TFRRP+C++GG++ QEV
Sbjct: 121 VDTESLCVLAGKMVWSVRIDLHILDNGGNLVDAANIAALAALMTFRRPDCTVGGENGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPIAVTFGFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HP E REPLPLIIHHLPIA TFGFF   + +V+DPT+ EEAVM GRMTVT+NAN D+C
Sbjct: 181 IIHPLEEREPLPLIIHHLPIAFTFGFFNKGNIVVMDPTYVEEAVMCGRMTVTVNANGDIC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSV-NLDV 300
           AIQK G EGV QSVI+ CLR+A  +A   T  I+  VE +N  R L+K+KRHP++   +V
Sbjct: 241 AIQKPGEEGVNQSVILHCLRLASSRAAATTKIIREEVEAYNCERSLQKVKRHPTLAKSEV 300

Query: 301 GG--AANLKDRKGISDGQKSI---NEFSDRLKLNSEESIASQSGSIESDVVSTNRGQINK 360
            G   A  ++ +  SD +++     E  +RLKL++EE  +S                   
Sbjct: 301 SGPTVAVKEEHRKSSDQERAAEISREHVERLKLSTEEVRSS------------------- 360

Query: 361 RDLDAKNFIGGPSSWDPYSKGVDSDFLKATLASRGNLTTAKKQDMSDEMMSSDTKLDEQA 420
           ++ +A NF GGPS+WDPYS+ +D D LK +LASRG+  T  K   + +M  S        
Sbjct: 361 KEEEAANFKGGPSNWDPYSEAMDVDSLKVSLASRGDPVT--KSSSTKKMNGSGNAQKVGV 420

Query: 421 EDDQANVP-PVAAKTSPEENGKKTLKDAVKPKNKRKKK 452
           E     V   +  K +  ++G+ TLKDAVKPK KRK K
Sbjct: 421 EISVEEVTGELGKKDTKHKDGEMTLKDAVKPKKKRKNK 437

[Close]

BLAST of Lcy03g009080 vs. TAIR 10
Match: AT3G60500.3 (3'-5'-exoribonuclease family protein )

HSP 1 Score: 501.5 bits (1290), Expect = 7.1e-142
Identity = 273/458 (59.61%), Postives = 336/458 (73.36%), Query Frame = 0


Query: 1   MEQRLANVWRLSANEKKFIETALLSDLRVDGRRPFDYRNITINFGKDDGSSEVQLGHTHV 60
           ME RLAN+WRL+ NE KF+ETAL S+LRVDGR  +DYR +TI FGK+ GSSEVQLG THV
Sbjct: 1   MEGRLANMWRLTVNESKFVETALQSELRVDGRGLYDYRKLTIKFGKEYGSSEVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           MGFVTAQLVQPY+DRPNEG+LSI+TEFSPMADPSFEPGRPGESAVELGR+IDRGLRESRA
Sbjct: 61  MGFVTAQLVQPYKDRPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA 120

Query: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDDQEV 180
           VDTESLCV++GK VW++R+DLHILDNGGNLVDAANIAALAAL TFRRP+C++GG++ QEV
Sbjct: 121 VDTESLCVLAGKMVWSVRIDLHILDNGGNLVDAANIAALAALMTFRRPDCTVGGENGQEV 180

Query: 181 IVHPPEVREPLPLIIHHLPIAVTFGFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HP E REPLPLIIHHLPIA TFGFF   + +V+DPT+ EEAVM GRMTVT+NAN D+C
Sbjct: 181 IIHPLEEREPLPLIIHHLPIAFTFGFFNKGNIVVMDPTYVEEAVMCGRMTVTVNANGDIC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRHPSV-NLDV 300
           AIQK G EGV QSVI+ CLR+A  +A   T  I+  VE +N  R L+K+KRHP++   +V
Sbjct: 241 AIQKPGEEGVNQSVILHCLRLASSRAAATTKIIREEVEAYNCERSLQKVKRHPTLAKSEV 300

Query: 301 GG--AANLKDRKGISDGQKSI---NEFSDRLKLNSEESIASQSGSIESDVVSTNRGQINK 360
            G   A  ++ +  SD +++     E  +RLKL++EE  +S                   
Sbjct: 301 SGPTVAVKEEHRKSSDQERAAEISREHVERLKLSTEEVRSS------------------- 360

Query: 361 RDLDAKNFIGGPSSWDPYSKGVDSDFLKATLASRGNLTTAKKQDMSDEMMSSDTKLDEQA 420
           ++ +A NF GGPS+WDPYS+ +D D LK +LASRG+  T  K   + +M  S        
Sbjct: 361 KEEEAANFKGGPSNWDPYSEAMDVDSLKVSLASRGDPVT--KSSSTKKMNGSGNAQKVGV 420

Query: 421 EDDQANVP-PVAAKTSPEENGKKTLKDAVKPKNKRKKK 452
           E     V   +  K +  ++G+ TLKDAVKPK KRK K
Sbjct: 421 EISVEEVTGELGKKDTKHKDGEMTLKDAVKPKKKRKNK 437

[Close]

BLAST of Lcy03g009080 vs. TAIR 10
Match: AT3G12990.1 (ribonuclease PH45A )

HSP 1 Score: 441.8 bits (1135), Expect = 6.7e-124
Identity = 211/292 (72.26%), Postives = 249/292 (85.27%), Query Frame = 0


Query: 1   MEQRLANVWRLSANEKKFIETALLSDLRVDGRRPFDYRNITINFGKDDGSSEVQLGHTHV 60
           ME RL N+WRL+ NE KF+E+AL S+LRVDGR  +DYR +TI FGK+ GSS+VQLG THV
Sbjct: 1   MEGRLNNMWRLTVNESKFVESALQSELRVDGRGLYDYRKLTIKFGKEYGSSQVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           M FVTAQLVQPY+DRP+EG+ SI+TEFSPMADPSFEPG PGESAVELGR+IDR LRESRA
Sbjct: 61  MAFVTAQLVQPYKDRPSEGSFSIFTEFSPMADPSFEPGHPGESAVELGRIIDRALRESRA 120

Query: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDDQEV 180
           VDTESLCV++GK VW++R+DLHILDNGGNLVDAAN+AALAAL TFRRP+C++GGD+ Q+V
Sbjct: 121 VDTESLCVLAGKLVWSVRIDLHILDNGGNLVDAANVAALAALMTFRRPDCTVGGDNSQDV 180

Query: 181 IVHPPEVREPLPLIIHHLPIAVTFGFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HPPE REPLPLIIHHLPIA TFGFF   S LV+DPT+ EEAVM GRMTVT+NAN D+C
Sbjct: 181 IIHPPEEREPLPLIIHHLPIAFTFGFFNKGSILVMDPTYVEEAVMCGRMTVTVNANGDIC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRH 293
           AIQK G EGV QSVI+ CLR+A  +A   T  I++AVE +N  R  +K+KRH
Sbjct: 241 AIQKPGEEGVNQSVILHCLRLASSRASATTKIIRDAVEAYNRERSSQKVKRH 292

[Close]

BLAST of Lcy03g009080 vs. TAIR 10
Match: AT3G12990.2 (ribonuclease PH45A )

HSP 1 Score: 441.8 bits (1135), Expect = 6.7e-124
Identity = 211/292 (72.26%), Postives = 249/292 (85.27%), Query Frame = 0


Query: 1   MEQRLANVWRLSANEKKFIETALLSDLRVDGRRPFDYRNITINFGKDDGSSEVQLGHTHV 60
           ME RL N+WRL+ NE KF+E+AL S+LRVDGR  +DYR +TI FGK+ GSS+VQLG THV
Sbjct: 1   MEGRLNNMWRLTVNESKFVESALQSELRVDGRGLYDYRKLTIKFGKEYGSSQVQLGQTHV 60

Query: 61  MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120
           M FVTAQLVQPY+DRP+EG+ SI+TEFSPMADPSFEPG PGESAVELGR+IDR LRESRA
Sbjct: 61  MAFVTAQLVQPYKDRPSEGSFSIFTEFSPMADPSFEPGHPGESAVELGRIIDRALRESRA 120

Query: 121 VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANIAALAALSTFRRPECSLGGDDDQEV 180
           VDTESLCV++GK VW++R+DLHILDNGGNLVDAAN+AALAAL TFRRP+C++GGD+ Q+V
Sbjct: 121 VDTESLCVLAGKLVWSVRIDLHILDNGGNLVDAANVAALAALMTFRRPDCTVGGDNSQDV 180

Query: 181 IVHPPEVREPLPLIIHHLPIAVTFGFFRSESTLVIDPTHYEEAVMGGRMTVTLNANNDVC 240
           I+HPPE REPLPLIIHHLPIA TFGFF   S LV+DPT+ EEAVM GRMTVT+NAN D+C
Sbjct: 181 IIHPPEEREPLPLIIHHLPIAFTFGFFNKGSILVMDPTYVEEAVMCGRMTVTVNANGDIC 240

Query: 241 AIQKAGGEGVLQSVIMQCLRIACVKAGDITTKIKNAVETHNSARQLRKIKRH 293
           AIQK G EGV QSVI+ CLR+A  +A   T  I++AVE +N  R  +K+KRH
Sbjct: 241 AIQKPGEEGVNQSVILHCLRLASSRASATTKIIRDAVEAYNRERSSQKVKRH 292

The following BLAST results are available for this feature:

BLAST of Lcy03g009080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M209	1.0e-140	59.61	Exosome complex component RRP45B OS=Arabidopsis thaliana OX=3702 GN=RRP45B PE=2 ...	[more]
Q9LDM2	9.4e-123	72.26	Exosome complex component RRP45A OS=Arabidopsis thaliana OX=3702 GN=RRP45A PE=2 ...	[more]
Q06265	3.0e-68	46.55	Exosome complex component RRP45 OS=Homo sapiens OX=9606 GN=EXOSC9 PE=1 SV=3	[more]
Q9JHI7	6.6e-68	46.18	Exosome complex component RRP45 OS=Mus musculus OX=10090 GN=Exosc9 PE=1 SV=1	[more]
Q4QR75	6.6e-68	46.18	Exosome complex component RRP45 OS=Rattus norvegicus OX=10116 GN=Exosc9 PE=1 SV=...	[more]

BLAST of Lcy03g009080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JG94	1.6e-229	90.26	exosome complex component RRP45A-like OS=Cucurbita maxima OX=3661 GN=LOC11148544...	[more]
A0A6J1HA43	3.6e-226	89.42	exosome complex component RRP45A-like OS=Cucurbita moschata OX=3662 GN=LOC111461...	[more]
A0A6J1DLD8	8.3e-223	88.36	exosome complex component RRP45A isoform X1 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A0A0M072	4.9e-215	86.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G615210 PE=3 SV=1	[more]
A0A1S3BP69	3.0e-212	86.40	exosome complex component RRP45A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of Lcy03g009080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022988100.1	3.2e-229	90.26	exosome complex component RRP45A-like [Cucurbita maxima] >XP_022988101.1 exosome...	[more]
XP_038879556.1	3.9e-227	91.19	exosome complex component RRP45A-like isoform X1 [Benincasa hispida] >XP_0388795...	[more]
KAG7023846.1	2.0e-226	90.04	Exosome complex component RRP45B [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6590195.1	2.6e-226	89.85	Exosome complex component RRP45B, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022960790.1	7.4e-226	89.42	exosome complex component RRP45A-like [Cucurbita moschata]	[more]

BLAST of Lcy03g009080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60500.1	7.1e-142	59.61	3'-5'-exoribonuclease family protein	[more]
AT3G60500.2	7.1e-142	59.61	3'-5'-exoribonuclease family protein	[more]
AT3G60500.3	7.1e-142	59.61	3'-5'-exoribonuclease family protein	[more]
AT3G12990.1	6.7e-124	72.26	ribonuclease PH45A	[more]
AT3G12990.2	6.7e-124	72.26	ribonuclease PH45A	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015847	Exoribonuclease, phosphorolytic domain 2	PFAM	PF03725	RNase_PH_C	coord: 197..262 e-value: 2.7E-12 score: 46.5
IPR027408	PNPase/RNase PH domain superfamily	GENE3D	3.30.230.70		coord: 6..295 e-value: 1.0E-97 score: 329.0
IPR001247	Exoribonuclease, phosphorolytic domain 1	PFAM	PF01138	RNase_PH	coord: 37..168 e-value: 3.8E-22 score: 79.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 392..459
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 400..416
None	No IPR available	PANTHER	PTHR11097	EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN	coord: 4..346
None	No IPR available	PANTHER	PTHR11097:SF26	EXOSOME COMPLEX COMPONENT RRP45A-LIKE	coord: 4..346
IPR033100	Exosome complex component RRP45	CDD	cd11368	RNase_PH_RRP45	coord: 11..270 e-value: 6.97093E-133 score: 381.876
IPR036345	Exoribonuclease, PH domain 2 superfamily	SUPERFAMILY	55666	Ribonuclease PH domain 2-like	coord: 193..291
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 11..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g009080.1	Lcy03g009080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043928	exonucleolytic catabolism of deadenylated mRNA
biological_process	GO:0000467	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0071028	nuclear mRNA surveillance
biological_process	GO:0071042	nuclear polyadenylation-dependent mRNA catabolic process
biological_process	GO:0071035	nuclear polyadenylation-dependent rRNA catabolic process
biological_process	GO:0071038	nuclear polyadenylation-dependent tRNA catabolic process
biological_process	GO:0034427	nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
biological_process	GO:0034473	U1 snRNA 3'-end processing
biological_process	GO:0034475	U4 snRNA 3'-end processing
biological_process	GO:0034476	U5 snRNA 3'-end processing
biological_process	GO:0006396	RNA processing
cellular_component	GO:0000177	cytoplasmic exosome (RNase complex)
cellular_component	GO:0000176	nuclear exosome (RNase complex)
cellular_component	GO:0000178	exosome (RNase complex)