Lcy03g009050 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g009050
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	ubiquitin-conjugating enzyme E2 20
Location	Chr03: 41900407 .. 41901746 (-)
RNA-Seq Expression	Lcy03g009050
Synteny	Lcy03g009050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTCTCTCTCTCTGTTTCTCACAATTCTCAGATAAGGGAGAGGAGAGAATCAATCACTTCCTGCTTCAGATTCAAATCAAAAGGTTGAACAAAAGAAGATCAACAGAGAAAAAAAAAAAAAATGGCCGCCATTAACAACAACAATACTCCGGTGGCCGTCTCTGCTCCATCGAAGCAATCACTTCCACCTCCCAAGACTATAGACTCTCACTCCGTTCTCAAGAGGTACAATCACAACCCTAAATTCAATTAAACTCGATTCTGTCGTCCTCAACAATGGTTCGTGTTAGTGTTTCTGAATCCCCTTTCGTTTCGTGTTTTCTCGCTCAATCAACAGGTTGCAATCTGAATTGATGGCCTTAATGGTATAAACAACACAACACTATTCTCTCTCTGCTGTTTTCTTTTTCCTGTTGGAGCCAAACAGAAAATTCCATGTGTGTTTCTGATCTCTGTTTCCGTTTAGATGAGTGGAGATTCGGGCGTTTCGGCTTTTCCTGAAGAGGACAATATTTTCTACTGGAAAGGGACGATTACTGGAAGTAAAGATACAGTGTTTGAAGGGACTGTGTATAGATTGTCTTTGGCTTTCCCTAATGAGTATCCATTCAAGCCACCAAAAGTCAAGTTTGAAACTGGCTGCTTTCATCCCAATGTGGACATCCATGGCAATATCTGCTTGGACATTCTTCAGGTATTTTCTCTGTACTGTAAACTAACAGTTCCCAACTGGGTTTAGGTGTAGAAGACTGATGAAACTCTCTCATTCTAGGATAAATGGACTTCTGCCTATGATGTGAGAACTGTTTTGTTGTCTATTCAGAGCCTACTTGGAGGTAAGTTTATTCTGTTGAGCTCTGTTTTTCCATTTTTTTCCCCAACTCCCAACTATTTTAGTAGAAGATGAGTGATGGTCTTGTTCTGAATGCAGAACCAAATATAAGCTCCCCTCTGAATAACCAGGCAGCTCAACTATGGAGCAACCAACAAGGTTGGTTGGATTTTTGTCTCTCCTTGTTATGTTTTTGATTGGTAAGGGTAGAGGGTGGTAATAACAAATGACTAAGTCACTAAACTTGTTTCTTCTCCATTGCTGTAGAATATAGGAAGATGGTGGAGAAATTGTACAAAGCTCCAACAGCTTAGAGTGTGGAGAAGAAGATGATGCCAAATTTGATCTTGGAGAAGAGAAGATGTATACAGATGACAGTTTGATAGTTGTGTGTTTCAGTTCCTTTCCTATTTCCTCATCTTTTTTGTCTCAATGACCAATTGCTTGTAAACTGAAACATGAAGGGAATATGTATGATGATAGTCTGGGAATCATATATAAAAAGTT

mRNA sequence

ATCTCTCTCTCTCTGTTTCTCACAATTCTCAGATAAGGGAGAGGAGAGAATCAATCACTTCCTGCTTCAGATTCAAATCAAAAGGTTGAACAAAAGAAGATCAACAGAGAAAAAAAAAAAAAATGGCCGCCATTAACAACAACAATACTCCGGTGGCCGTCTCTGCTCCATCGAAGCAATCACTTCCACCTCCCAAGACTATAGACTCTCACTCCGTTCTCAAGAGGTTGCAATCTGAATTGATGGCCTTAATGATGAGTGGAGATTCGGGCGTTTCGGCTTTTCCTGAAGAGGACAATATTTTCTACTGGAAAGGGACGATTACTGGAAGTAAAGATACAGTGTTTGAAGGGACTGTGTATAGATTGTCTTTGGCTTTCCCTAATGAGTATCCATTCAAGCCACCAAAAGTCAAGTTTGAAACTGGCTGCTTTCATCCCAATGTGGACATCCATGGCAATATCTGCTTGGACATTCTTCAGGATAAATGGACTTCTGCCTATGATGTGAGAACTGTTTTGTTGTCTATTCAGAGCCTACTTGGAGAACCAAATATAAGCTCCCCTCTGAATAACCAGGCAGCTCAACTATGGAGCAACCAACAAGAATATAGGAAGATGGTGGAGAAATTGTACAAAGCTCCAACAGCTTAGAGTGTGGAGAAGAAGATGATGCCAAATTTGATCTTGGAGAAGAGAAGATGTATACAGATGACAGTTTGATAGTTGTGTGTTTCAGTTCCTTTCCTATTTCCTCATCTTTTTTGTCTCAATGACCAATTGCTTGTAAACTGAAACATGAAGGGAATATGTATGATGATAGTCTGGGAATCATATATAAAAAGTT

Coding sequence (CDS)

ATGGCCGCCATTAACAACAACAATACTCCGGTGGCCGTCTCTGCTCCATCGAAGCAATCACTTCCACCTCCCAAGACTATAGACTCTCACTCCGTTCTCAAGAGGTTGCAATCTGAATTGATGGCCTTAATGATGAGTGGAGATTCGGGCGTTTCGGCTTTTCCTGAAGAGGACAATATTTTCTACTGGAAAGGGACGATTACTGGAAGTAAAGATACAGTGTTTGAAGGGACTGTGTATAGATTGTCTTTGGCTTTCCCTAATGAGTATCCATTCAAGCCACCAAAAGTCAAGTTTGAAACTGGCTGCTTTCATCCCAATGTGGACATCCATGGCAATATCTGCTTGGACATTCTTCAGGATAAATGGACTTCTGCCTATGATGTGAGAACTGTTTTGTTGTCTATTCAGAGCCTACTTGGAGAACCAAATATAAGCTCCCCTCTGAATAACCAGGCAGCTCAACTATGGAGCAACCAACAAGAATATAGGAAGATGGTGGAGAAATTGTACAAAGCTCCAACAGCTTAG

Protein sequence

MAAINNNNTPVAVSAPSKQSLPPPKTIDSHSVLKRLQSELMALMMSGDSGVSAFPEEDNIFYWKGTITGSKDTVFEGTVYRLSLAFPNEYPFKPPKVKFETGCFHPNVDIHGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPNISSPLNNQAAQLWSNQQEYRKMVEKLYKAPTA

Homology

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BLAST of Lcy03g009050 vs. ExPASy Swiss-Prot
Match: Q9LJZ5 (Ubiquitin-conjugating enzyme E2 19 OS=Arabidopsis thaliana OX=3702 GN=UBC19 PE=1 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 5.1e-77
Identity = 143/177 (80.79%), Postives = 153/177 (86.44%), Query Frame = 0


Query: 1   MAAIN--NNNTPVA---VSAPSKQSLPPPKTIDSHSVLKRLQSELMALMMSGDSGVSAFP 60
           MA +N    NTP A    +  SKQS PP KT+DSHSVLKRLQSELM LMM  D G+SAFP
Sbjct: 1   MATVNGYTGNTPAATTPAATGSKQSAPPTKTVDSHSVLKRLQSELMGLMMGADPGISAFP 60

Query: 61  EEDNIFYWKGTITGSKDTVFEGTVYRLSLAFPNEYPFKPPKVKFETGCFHPNVDIHGNIC 120
           EEDNIF WKGTITGSKDTVFEGT YRLSL F N+YPFK PKVKFET CFHPNVD++GNIC
Sbjct: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNIC 120

Query: 121 LDILQDKWTSAYDVRTVLLSIQSLLGEPNISSPLNNQAAQLWSNQQEYRKMVEKLYK 173
           LDILQDKW+SAYDVRT+LLSIQSLLGEPNISSPLNNQAAQLWSNQ+EYRKMVEKLYK
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQEEYRKMVEKLYK 177

[Close]

BLAST of Lcy03g009050 vs. ExPASy Swiss-Prot
Match: Q8L7T3 (Ubiquitin-conjugating enzyme E2 20 OS=Arabidopsis thaliana OX=3702 GN=UBC20 PE=2 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 1.9e-76
Identity = 143/180 (79.44%), Postives = 154/180 (85.56%), Query Frame = 0


Query: 1   MAAIN--NNNTPV--AVSAPSKQSLPPPKTIDSHSVLKRLQSELMALMMSGDSGVSAFPE 60
           MAA+N    NTP     S  SKQ   P KT+DS SVLKRLQSELM LMM G  G+SAFPE
Sbjct: 1   MAAVNGYQGNTPADPPASNGSKQPAAPTKTVDSQSVLKRLQSELMGLMMGGGPGISAFPE 60

Query: 61  EDNIFYWKGTITGSKDTVFEGTVYRLSLAFPNEYPFKPPKVKFETGCFHPNVDIHGNICL 120
           EDNIF WKGTITGSKDTVFEGT YRLSL+F N+YPFKPPKVKFET CFHPNVD++GNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICL 120

Query: 121 DILQDKWTSAYDVRTVLLSIQSLLGEPNISSPLNNQAAQLWSNQQEYRKMVEKLYKAPTA 177
           DILQDKW+SAYDVRT+LLSIQSLLGEPNISSPLN QAAQLWSNQ+EYRKMVEKLYK P+A
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPSA 180

[Close]

BLAST of Lcy03g009050 vs. ExPASy Swiss-Prot
Match: Q54XS6 (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum OX=44689 GN=ube2c PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.0e-53
Identity = 96/147 (65.31%), Postives = 119/147 (80.95%), Query Frame = 0


Query: 30  HSVLKRLQSELMALMMSGDSGVSAFPEEDNIFYWKGTITGSKDTVFEGTVYRLSLAFPNE 89
           HSV KRLQSELM LMM    G+SAFP+ DNIF W GTI G+KDTV+E   +++SL FP +
Sbjct: 5   HSVSKRLQSELMNLMMGPSPGISAFPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKFPTD 64

Query: 90  YPFKPPKVKFETGCFHPNVDIHGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPNISSPL 149
           YP+KPP VKFET CFHPNVD +GNICLDIL+DKW+  Y+VR++L+SIQSLLGEPN  SPL
Sbjct: 65  YPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNESPL 124

Query: 150 NNQAAQLWSNQQEYRKMVEKLYKAPTA 177
           N+ AA LWSNQ EY+K+++K Y+  T+
Sbjct: 125 NSYAASLWSNQDEYKKVLDKRYQEATS 151

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BLAST of Lcy03g009050 vs. ExPASy Swiss-Prot
Match: Q95044 (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima OX=6584 GN=UBE2C PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.7e-52
Identity = 91/145 (62.76%), Postives = 117/145 (80.69%), Query Frame = 0


Query: 28  DSHSVLKRLQSELMALMMSGDSGVSAFPEEDNIFYWKGTITGSKDTVFEGTVYRLSLAFP 87
           + HSV KRLQ EL  L+MSGD G++AFP+ DN+F W  T+ G KDTV+E   Y+L+L FP
Sbjct: 27  ERHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFP 86

Query: 88  NEYPFKPPKVKFETGCFHPNVDIHGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPNISS 147
           ++YP+KPP VKF T C+HPNVD  GNICLDIL++ WT++YDVRT+LLS+QSLLGEPN +S
Sbjct: 87  SDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNAS 146

Query: 148 PLNNQAAQLWSNQQEYRKMVEKLYK 173
           PLN QAA +WSNQ EY+K++ + YK
Sbjct: 147 PLNAQAADMWSNQTEYKKVLHEKYK 171

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BLAST of Lcy03g009050 vs. ExPASy Swiss-Prot
Match: Q9VTY6 (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster OX=7227 GN=vih PE=1 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.4e-50
Identity = 93/156 (59.62%), Postives = 117/156 (75.00%), Query Frame = 0


Query: 17  SKQSLPPPKTIDSHSVLKRLQSELMALMMSGDSGVSAFPEEDNIFYWKGTITGSKDTVFE 76
           SK S       D+H+V KRL  ELM LMM+ + G+SAFP+ +NIF W GTI G ++TV+ 
Sbjct: 18  SKHSDDSMPVKDNHAVSKRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYS 77

Query: 77  GTVYRLSLAFPNEYPFKPPKVKFETGCFHPNVDIHGNICLDILQDKWTSAYDVRTVLLSI 136
           G  YRLSL FPN YP+  P VKF T CFHPNVD+ G ICLDIL+DKW++ YDVRT+LLSI
Sbjct: 78  GQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSI 137

Query: 137 QSLLGEPNISSPLNNQAAQLWSNQQEYRKMVEKLYK 173
           QSLLGEPN  SPLN QAA +W++Q+EY+K ++  Y+
Sbjct: 138 QSLLGEPNNESPLNAQAAMMWNDQKEYKKYLDAFYE 173

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BLAST of Lcy03g009050 vs. ExPASy TrEMBL
Match: A0A6P3Z7R4 (ubiquitin-conjugating enzyme E2 20 OS=Ziziphus jujuba OX=326968 GN=LOC107410867 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.9e-82
Identity = 153/185 (82.70%), Postives = 166/185 (89.73%), Query Frame = 0


Query: 1   MAAIN---------NNNTPVAVSAPSKQSLPPPKTIDSHSVLKRLQSELMALMMSGDSGV 60
           MAA+N           NTPV  +AP+KQSLPP KT+DS SVLKRLQSELMALMMSGDSG+
Sbjct: 1   MAAVNGFSETGHGYQTNTPVTAAAPTKQSLPPAKTVDSQSVLKRLQSELMALMMSGDSGI 60

Query: 61  SAFPEEDNIFYWKGTITGSKDTVFEGTVYRLSLAFPNEYPFKPPKVKFETGCFHPNVDIH 120
           SAFPEEDNIF WKGTI GSKDTVFEGT YRLSL+FPN+YPFKPPKVKFETGCFHPNVD++
Sbjct: 61  SAFPEEDNIFCWKGTIIGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDVY 120

Query: 121 GNICLDILQDKWTSAYDVRTVLLSIQSLLGEPNISSPLNNQAAQLWSNQQEYRKMVEKLY 177
           GNICLDILQDKW+SAYDVRTVL+SIQSLLGEPNISSPLN QAAQLW+NQ+EYRKMVEKLY
Sbjct: 121 GNICLDILQDKWSSAYDVRTVLISIQSLLGEPNISSPLNTQAAQLWNNQEEYRKMVEKLY 180

[Close]

BLAST of Lcy03g009050 vs. ExPASy TrEMBL
Match: A0A6J1JFS1 (ubiquitin-conjugating enzyme E2 20-like OS=Cucurbita maxima OX=3661 GN=LOC111484001 PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 4.6e-81
Identity = 154/180 (85.56%), Postives = 165/180 (91.67%), Query Frame = 0


Query: 1   MAAIN---NNNTPV-AVSAPSKQSLPPPKTIDSHSVLKRLQSELMALMMSGDSGVSAFPE 60
           MAAIN   +N TP  AV +P+K+SLPP KT DS SVLKRLQSELMALMMSGDSG+SAFPE
Sbjct: 1   MAAINRHTDNTTPANAVVSPAKKSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFYWKGTITGSKDTVFEGTVYRLSLAFPNEYPFKPPKVKFETGCFHPNVDIHGNICL 120
           EDNIF WKGTITGSKDTVFEGT YRLS +FPN+YPFKPPKVKFETGCFHPNVDI+GNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120

Query: 121 DILQDKWTSAYDVRTVLLSIQSLLGEPNISSPLNNQAAQLWSNQQEYRKMVEKLYKAPTA 177
           DILQDKW+SAYDVRT+LLSIQSLLGEPNISSPLN QAAQLWSNQ+EYRKMVEKLYK PTA
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180

[Close]

BLAST of Lcy03g009050 vs. ExPASy TrEMBL
Match: A0A6J1FWW0 (ubiquitin-conjugating enzyme E2 20-like OS=Cucurbita moschata OX=3662 GN=LOC111448180 PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 4.6e-81
Identity = 154/180 (85.56%), Postives = 165/180 (91.67%), Query Frame = 0


Query: 1   MAAIN---NNNTPV-AVSAPSKQSLPPPKTIDSHSVLKRLQSELMALMMSGDSGVSAFPE 60
           MAAIN   +N TP  AV +P+K+SLPP KT DS SVLKRLQSELMALMMSGDSG+SAFPE
Sbjct: 1   MAAINRHTDNTTPANAVVSPAKKSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFYWKGTITGSKDTVFEGTVYRLSLAFPNEYPFKPPKVKFETGCFHPNVDIHGNICL 120
           EDNIF WKGTITGSKDTVFEGT YRLS +FPN+YPFKPPKVKFETGCFHPNVDI+GNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120

Query: 121 DILQDKWTSAYDVRTVLLSIQSLLGEPNISSPLNNQAAQLWSNQQEYRKMVEKLYKAPTA 177
           DILQDKW+SAYDVRT+LLSIQSLLGEPNISSPLN QAAQLWSNQ+EYRKMVEKLYK PTA
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180

[Close]

BLAST of Lcy03g009050 vs. ExPASy TrEMBL
Match: A0A061GTP8 (Ubiquitin-conjugating enzyme19 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_040797 PE=3 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.0e-81
Identity = 151/178 (84.83%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 1   MAAIN--NNNTPVAVSAPSKQSLPPPKTIDSHSVLKRLQSELMALMMSGDSGVSAFPEED 60
           MA +N    NTPVA S  +KQ  P  KT+DS SVLKRLQSELMALMMSGDSG+SAFPEED
Sbjct: 1   MATVNGYQGNTPVATSTGTKQPAPTAKTVDSQSVLKRLQSELMALMMSGDSGISAFPEED 60

Query: 61  NIFYWKGTITGSKDTVFEGTVYRLSLAFPNEYPFKPPKVKFETGCFHPNVDIHGNICLDI 120
           NIF WKGTITGSKDTVFEGT YRLSLAFPN+YPFKPPKVKFETGCFHPNVD++GNICLDI
Sbjct: 61  NIFCWKGTITGSKDTVFEGTEYRLSLAFPNDYPFKPPKVKFETGCFHPNVDVYGNICLDI 120

Query: 121 LQDKWTSAYDVRTVLLSIQSLLGEPNISSPLNNQAAQLWSNQQEYRKMVEKLYKAPTA 177
           LQDKW+SAYDVRT+LLSIQSLLGEPNISSPLN QAAQLWSNQ+EYRKMVEKLYKAP A
Sbjct: 121 LQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKAPNA 178

[Close]

BLAST of Lcy03g009050 vs. ExPASy TrEMBL
Match: A0A6J0ZWF3 (ubiquitin-conjugating enzyme E2 20 OS=Herrania umbratica OX=108875 GN=LOC110412737 PE=3 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.0e-81
Identity = 151/178 (84.83%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 1   MAAIN--NNNTPVAVSAPSKQSLPPPKTIDSHSVLKRLQSELMALMMSGDSGVSAFPEED 60
           MA +N    NTPVA S  +KQ  P  KT+DS SVLKRLQSELMALMMSGDSG+SAFPEED
Sbjct: 1   MATVNGYQGNTPVATSTGTKQPAPTAKTVDSQSVLKRLQSELMALMMSGDSGISAFPEED 60

Query: 61  NIFYWKGTITGSKDTVFEGTVYRLSLAFPNEYPFKPPKVKFETGCFHPNVDIHGNICLDI 120
           NIF WKGTITGSKDTVFEGT YRLSLAFPN+YPFKPPKVKFETGCFHPNVD++GNICLDI
Sbjct: 61  NIFCWKGTITGSKDTVFEGTEYRLSLAFPNDYPFKPPKVKFETGCFHPNVDVYGNICLDI 120

Query: 121 LQDKWTSAYDVRTVLLSIQSLLGEPNISSPLNNQAAQLWSNQQEYRKMVEKLYKAPTA 177
           LQDKW+SAYDVRT+LLSIQSLLGEPNISSPLN QAAQLWSNQ+EYRKMVEKLYKAP A
Sbjct: 121 LQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKAPNA 178

[Close]

BLAST of Lcy03g009050 vs. NCBI nr
Match: XP_015873839.1 (ubiquitin-conjugating enzyme E2 20 [Ziziphus jujuba])

HSP 1 Score: 315.1 bits (806), Expect = 3.9e-82
Identity = 153/185 (82.70%), Postives = 166/185 (89.73%), Query Frame = 0


Query: 1   MAAIN---------NNNTPVAVSAPSKQSLPPPKTIDSHSVLKRLQSELMALMMSGDSGV 60
           MAA+N           NTPV  +AP+KQSLPP KT+DS SVLKRLQSELMALMMSGDSG+
Sbjct: 1   MAAVNGFSETGHGYQTNTPVTAAAPTKQSLPPAKTVDSQSVLKRLQSELMALMMSGDSGI 60

Query: 61  SAFPEEDNIFYWKGTITGSKDTVFEGTVYRLSLAFPNEYPFKPPKVKFETGCFHPNVDIH 120
           SAFPEEDNIF WKGTI GSKDTVFEGT YRLSL+FPN+YPFKPPKVKFETGCFHPNVD++
Sbjct: 61  SAFPEEDNIFCWKGTIIGSKDTVFEGTEYRLSLSFPNDYPFKPPKVKFETGCFHPNVDVY 120

Query: 121 GNICLDILQDKWTSAYDVRTVLLSIQSLLGEPNISSPLNNQAAQLWSNQQEYRKMVEKLY 177
           GNICLDILQDKW+SAYDVRTVL+SIQSLLGEPNISSPLN QAAQLW+NQ+EYRKMVEKLY
Sbjct: 121 GNICLDILQDKWSSAYDVRTVLISIQSLLGEPNISSPLNTQAAQLWNNQEEYRKMVEKLY 180

[Close]

BLAST of Lcy03g009050 vs. NCBI nr
Match: KAF3454271.1 (hypothetical protein FNV43_RR04718 [Rhamnella rubrinervis])

HSP 1 Score: 312.0 bits (798), Expect = 3.3e-81
Identity = 154/185 (83.24%), Postives = 167/185 (90.27%), Query Frame = 0


Query: 1   MAAIN--------NNNTPV-AVSAPSKQSLPPPKTIDSHSVLKRLQSELMALMMSGDSGV 60
           MAA+N         +NTPV A +AP KQSLPP KT+DS SVLKRLQSELMALMMSGDSG+
Sbjct: 1   MAAVNGFTETHGYQDNTPVAAANAPVKQSLPPAKTVDSQSVLKRLQSELMALMMSGDSGI 60

Query: 61  SAFPEEDNIFYWKGTITGSKDTVFEGTVYRLSLAFPNEYPFKPPKVKFETGCFHPNVDIH 120
           SAFPEEDNIF WKGTI GSKDTVFEGT YRLSL+FPN+YPFKPPKVKFETGCFHPNVD++
Sbjct: 61  SAFPEEDNIFCWKGTINGSKDTVFEGTQYRLSLSFPNDYPFKPPKVKFETGCFHPNVDVY 120

Query: 121 GNICLDILQDKWTSAYDVRTVLLSIQSLLGEPNISSPLNNQAAQLWSNQQEYRKMVEKLY 177
           GNICLDILQDKW+SAYDVRTVL+SIQSLLGEPNISSPLN QAAQLW+NQ+EYRKMVEKLY
Sbjct: 121 GNICLDILQDKWSSAYDVRTVLISIQSLLGEPNISSPLNTQAAQLWNNQEEYRKMVEKLY 180

[Close]

BLAST of Lcy03g009050 vs. NCBI nr
Match: XP_007015153.2 (PREDICTED: ubiquitin-conjugating enzyme E2 20 [Theobroma cacao])

HSP 1 Score: 312.0 bits (798), Expect = 3.3e-81
Identity = 152/178 (85.39%), Postives = 162/178 (91.01%), Query Frame = 0


Query: 1   MAAIN--NNNTPVAVSAPSKQSLPPPKTIDSHSVLKRLQSELMALMMSGDSGVSAFPEED 60
           MA +N    NTPVA S  +KQS P  KT+DS SVLKRLQSELMALMMSGDSG+SAFPEED
Sbjct: 1   MATVNGYQGNTPVATSTGTKQSAPTAKTVDSQSVLKRLQSELMALMMSGDSGISAFPEED 60

Query: 61  NIFYWKGTITGSKDTVFEGTVYRLSLAFPNEYPFKPPKVKFETGCFHPNVDIHGNICLDI 120
           NIF WKGTITGSKDTVFEGT YRLSLAFPN+YPFKPPKVKFETGCFHPNVD++GNICLDI
Sbjct: 61  NIFCWKGTITGSKDTVFEGTEYRLSLAFPNDYPFKPPKVKFETGCFHPNVDVYGNICLDI 120

Query: 121 LQDKWTSAYDVRTVLLSIQSLLGEPNISSPLNNQAAQLWSNQQEYRKMVEKLYKAPTA 177
           LQDKW+SAYDVRT+LLSIQSLLGEPNISSPLN QAAQLWSNQ+EYRKMVEKLYKAP A
Sbjct: 121 LQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKAPNA 178

[Close]

BLAST of Lcy03g009050 vs. NCBI nr
Match: XP_022943408.1 (ubiquitin-conjugating enzyme E2 20-like [Cucurbita moschata] >XP_022986183.1 ubiquitin-conjugating enzyme E2 20-like [Cucurbita maxima] >XP_023513276.1 ubiquitin-conjugating enzyme E2 20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310.5 bits (794), Expect = 9.6e-81
Identity = 154/180 (85.56%), Postives = 165/180 (91.67%), Query Frame = 0


Query: 1   MAAIN---NNNTPV-AVSAPSKQSLPPPKTIDSHSVLKRLQSELMALMMSGDSGVSAFPE 60
           MAAIN   +N TP  AV +P+K+SLPP KT DS SVLKRLQSELMALMMSGDSG+SAFPE
Sbjct: 1   MAAINRHTDNTTPANAVVSPAKKSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFYWKGTITGSKDTVFEGTVYRLSLAFPNEYPFKPPKVKFETGCFHPNVDIHGNICL 120
           EDNIF WKGTITGSKDTVFEGT YRLS +FPN+YPFKPPKVKFETGCFHPNVDI+GNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120

Query: 121 DILQDKWTSAYDVRTVLLSIQSLLGEPNISSPLNNQAAQLWSNQQEYRKMVEKLYKAPTA 177
           DILQDKW+SAYDVRT+LLSIQSLLGEPNISSPLN QAAQLWSNQ+EYRKMVEKLYK PTA
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180

[Close]

BLAST of Lcy03g009050 vs. NCBI nr
Match: KAG6570408.1 (Magnesium-chelatase subunit ChlD, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 310.5 bits (794), Expect = 9.6e-81
Identity = 154/180 (85.56%), Postives = 165/180 (91.67%), Query Frame = 0


Query: 1    MAAIN---NNNTPV-AVSAPSKQSLPPPKTIDSHSVLKRLQSELMALMMSGDSGVSAFPE 60
            MAAIN   +N TP  AV +P+K+SLPP KT DS SVLKRLQSELMALMMSGDSG+SAFPE
Sbjct: 1090 MAAINRHTDNTTPANAVVSPAKKSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 1149

Query: 61   EDNIFYWKGTITGSKDTVFEGTVYRLSLAFPNEYPFKPPKVKFETGCFHPNVDIHGNICL 120
            EDNIF WKGTITGSKDTVFEGT YRLS +FPN+YPFKPPKVKFETGCFHPNVDI+GNICL
Sbjct: 1150 EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 1209

Query: 121  DILQDKWTSAYDVRTVLLSIQSLLGEPNISSPLNNQAAQLWSNQQEYRKMVEKLYKAPTA 177
            DILQDKW+SAYDVRT+LLSIQSLLGEPNISSPLN QAAQLWSNQ+EYRKMVEKLYK PTA
Sbjct: 1210 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 1269

[Close]

BLAST of Lcy03g009050 vs. TAIR 10
Match: AT3G20060.1 (ubiquitin-conjugating enzyme19 )

HSP 1 Score: 288.5 bits (737), Expect = 3.6e-78
Identity = 143/177 (80.79%), Postives = 153/177 (86.44%), Query Frame = 0


Query: 1   MAAIN--NNNTPVA---VSAPSKQSLPPPKTIDSHSVLKRLQSELMALMMSGDSGVSAFP 60
           MA +N    NTP A    +  SKQS PP KT+DSHSVLKRLQSELM LMM  D G+SAFP
Sbjct: 1   MATVNGYTGNTPAATTPAATGSKQSAPPTKTVDSHSVLKRLQSELMGLMMGADPGISAFP 60

Query: 61  EEDNIFYWKGTITGSKDTVFEGTVYRLSLAFPNEYPFKPPKVKFETGCFHPNVDIHGNIC 120
           EEDNIF WKGTITGSKDTVFEGT YRLSL F N+YPFK PKVKFET CFHPNVD++GNIC
Sbjct: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNIC 120

Query: 121 LDILQDKWTSAYDVRTVLLSIQSLLGEPNISSPLNNQAAQLWSNQQEYRKMVEKLYK 173
           LDILQDKW+SAYDVRT+LLSIQSLLGEPNISSPLNNQAAQLWSNQ+EYRKMVEKLYK
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQEEYRKMVEKLYK 177

[Close]

BLAST of Lcy03g009050 vs. TAIR 10
Match: AT1G50490.1 (ubiquitin-conjugating enzyme 20 )

HSP 1 Score: 286.6 bits (732), Expect = 1.4e-77
Identity = 143/180 (79.44%), Postives = 154/180 (85.56%), Query Frame = 0


Query: 1   MAAIN--NNNTPV--AVSAPSKQSLPPPKTIDSHSVLKRLQSELMALMMSGDSGVSAFPE 60
           MAA+N    NTP     S  SKQ   P KT+DS SVLKRLQSELM LMM G  G+SAFPE
Sbjct: 1   MAAVNGYQGNTPADPPASNGSKQPAAPTKTVDSQSVLKRLQSELMGLMMGGGPGISAFPE 60

Query: 61  EDNIFYWKGTITGSKDTVFEGTVYRLSLAFPNEYPFKPPKVKFETGCFHPNVDIHGNICL 120
           EDNIF WKGTITGSKDTVFEGT YRLSL+F N+YPFKPPKVKFET CFHPNVD++GNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICL 120

Query: 121 DILQDKWTSAYDVRTVLLSIQSLLGEPNISSPLNNQAAQLWSNQQEYRKMVEKLYKAPTA 177
           DILQDKW+SAYDVRT+LLSIQSLLGEPNISSPLN QAAQLWSNQ+EYRKMVEKLYK P+A
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPSA 180

[Close]

BLAST of Lcy03g009050 vs. TAIR 10
Match: AT3G20060.2 (ubiquitin-conjugating enzyme19 )

HSP 1 Score: 246.1 bits (627), Expect = 2.1e-65
Identity = 115/132 (87.12%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 41  MALMMSGDSGVSAFPEEDNIFYWKGTITGSKDTVFEGTVYRLSLAFPNEYPFKPPKVKFE 100
           M LMM  D G+SAFPEEDNIF WKGTITGSKDTVFEGT YRLSL F N+YPFK PKVKFE
Sbjct: 1   MGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFE 60

Query: 101 TGCFHPNVDIHGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPNISSPLNNQAAQLWSNQ 160
           T CFHPNVD++GNICLDILQDKW+SAYDVRT+LLSIQSLLGEPNISSPLNNQAAQLWSNQ
Sbjct: 61  TCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQ 120

Query: 161 QEYRKMVEKLYK 173
           +EYRKMVEKLYK
Sbjct: 121 EEYRKMVEKLYK 132

[Close]

BLAST of Lcy03g009050 vs. TAIR 10
Match: AT2G02760.1 (ubiquiting-conjugating enzyme 2 )

HSP 1 Score: 130.6 bits (327), Expect = 1.3e-30
Identity = 60/138 (43.48%), Postives = 92/138 (66.67%), Query Frame = 0


Query: 34  KRLQSELMALMMSGDSGVSAFPEEDNIFYWKGTITGSKDTVFEGTVYRLSLAFPNEYPFK 93
           KRL  +   L     +G+S  P+++NI  W   I G  DT ++G  ++LSL F  +YP K
Sbjct: 7   KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66

Query: 94  PPKVKFETGCFHPNVDIHGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPNISSPLNNQA 153
           PP V+F +  FHPN+   G+ICLDILQ++W+  YDV  +L SIQSLL +PN +SP N++A
Sbjct: 67  PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126

Query: 154 AQLWS-NQQEYRKMVEKL 171
           A+++S +++EY + V ++
Sbjct: 127 ARMFSESKREYNRRVREV 144

[Close]

BLAST of Lcy03g009050 vs. TAIR 10
Match: AT1G14400.1 (ubiquitin carrier protein 1 )

HSP 1 Score: 130.2 bits (326), Expect = 1.6e-30
Identity = 60/135 (44.44%), Postives = 90/135 (66.67%), Query Frame = 0


Query: 34  KRLQSELMALMMSGDSGVSAFPEEDNIFYWKGTITGSKDTVFEGTVYRLSLAFPNEYPFK 93
           KRL  +   L     +G+S  P+++NI  W   I G  DT ++G  ++LSL F  +YP K
Sbjct: 7   KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66

Query: 94  PPKVKFETGCFHPNVDIHGNICLDILQDKWTSAYDVRTVLLSIQSLLGEPNISSPLNNQA 153
           PP V+F +  FHPN+   G+ICLDILQ++W+  YDV  +L SIQSLL +PN +SP N++A
Sbjct: 67  PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126

Query: 154 AQLWS-NQQEYRKMV 168
           A+++S +++EY + V
Sbjct: 127 ARMYSESKREYNRRV 141

The following BLAST results are available for this feature:

BLAST of Lcy03g009050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LJZ5	5.1e-77	80.79	Ubiquitin-conjugating enzyme E2 19 OS=Arabidopsis thaliana OX=3702 GN=UBC19 PE=1...	[more]
Q8L7T3	1.9e-76	79.44	Ubiquitin-conjugating enzyme E2 20 OS=Arabidopsis thaliana OX=3702 GN=UBC20 PE=2...	[more]
Q54XS6	3.0e-53	65.31	Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum OX=44689 ...	[more]
Q95044	5.7e-52	62.76	Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima OX=6584 GN=UBE2C PE=1 S...	[more]
Q9VTY6	2.4e-50	59.62	Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster OX=7227 GN=vih PE=1...	[more]

BLAST of Lcy03g009050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6P3Z7R4	1.9e-82	82.70	ubiquitin-conjugating enzyme E2 20 OS=Ziziphus jujuba OX=326968 GN=LOC107410867 ...	[more]
A0A6J1JFS1	4.6e-81	85.56	ubiquitin-conjugating enzyme E2 20-like OS=Cucurbita maxima OX=3661 GN=LOC111484...	[more]
A0A6J1FWW0	4.6e-81	85.56	ubiquitin-conjugating enzyme E2 20-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A061GTP8	6.0e-81	84.83	Ubiquitin-conjugating enzyme19 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_04079...	[more]
A0A6J0ZWF3	6.0e-81	84.83	ubiquitin-conjugating enzyme E2 20 OS=Herrania umbratica OX=108875 GN=LOC1104127...	[more]

BLAST of Lcy03g009050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_015873839.1	3.9e-82	82.70	ubiquitin-conjugating enzyme E2 20 [Ziziphus jujuba]	[more]
KAF3454271.1	3.3e-81	83.24	hypothetical protein FNV43_RR04718 [Rhamnella rubrinervis]	[more]
XP_007015153.2	3.3e-81	85.39	PREDICTED: ubiquitin-conjugating enzyme E2 20 [Theobroma cacao]	[more]
XP_022943408.1	9.6e-81	85.56	ubiquitin-conjugating enzyme E2 20-like [Cucurbita moschata] >XP_022986183.1 ubi...	[more]
KAG6570408.1	9.6e-81	85.56	Magnesium-chelatase subunit ChlD, chloroplastic, partial [Cucurbita argyrosperma...	[more]

BLAST of Lcy03g009050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20060.1	3.6e-78	80.79	ubiquitin-conjugating enzyme19	[more]
AT1G50490.1	1.4e-77	79.44	ubiquitin-conjugating enzyme 20	[more]
AT3G20060.2	2.1e-65	87.12	ubiquitin-conjugating enzyme19	[more]
AT2G02760.1	1.3e-30	43.48	ubiquiting-conjugating enzyme 2	[more]
AT1G14400.1	1.6e-30	44.44	ubiquitin carrier protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 34..176 e-value: 6.3E-62 score: 221.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 16..174
None	No IPR available	PANTHER	PTHR24068:SF354	UBIQUITIN-CONJUGATING ENZYME E2 19	coord: 16..174
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 35..169 e-value: 3.1E-48 score: 163.0
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 31..176 score: 48.77702
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 34..171 e-value: 1.40615E-65 score: 195.499
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 25..174 e-value: 5.9E-58 score: 196.9
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 28..171
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 104..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g009050.1	Lcy03g009050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031145	anaphase-promoting complex-dependent catabolic process
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0030071	regulation of mitotic metaphase/anaphase transition
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity