Lcy03g009040 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g009040
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	THUMP domain-containing protein 1 homolog
Location	Chr03: 41890548 .. 41899793 (+)
RNA-Seq Expression	Lcy03g009040
Synteny	Lcy03g009040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGATACAGTTTTTTTGGCTCGAACTTGCACAACTTGGAACTCTGTGTTTCACTCTGTAATGGCCGCCGAGGACAAACCCTCCGCCGGAGGCAAGAAAAGGAAGCAGCGCTATCTTCCCCACAATGTTACCTCTCAATCTCTTCTTCTTTTCTTTTGACCTTCTGTATTCGATTAACTCAATTCCTTCTAATTTCCTTGTTTTTCTCCTTCCTCAGAAACCAGTGAAGAAGAAGGGCCATTACCCATTACGCCCAGGAGTTCAAGGTTTCTTTATCACCTGCGATGGCGGCCGAGAACGCCAAGCCTCCATTGAAGCCATCAACGTTCTTGACTCTGTATGACTTTCCCTTTTCTTGCCGCTTCTGGGTTATGTTTTGATGGGATTGAGATGAGTATTTGAATGTTTCACGTCTTGATACTCATTAAGCAGCTTTACTATTTTCTTATTGTGAAAGTCAGTTGGGGAAATGGAACCTTTGTTTTTGCCTTGTTAGAAATAGCAGAGATAAGAATTGGTGAAAGGGGAGAGAAAGAGGGAGTAATTGAAGATAATTAGAGAGAATTGGAAGCAGATAATGTGAAGCGTGGTACTCAGTGGTCAATGATGTTAAAAGGCAAAGGGTCTGTTTGTATAGGCCAGAGCAAAGCATATTAGTGAGTAGTGAATACTAAATGATATCTATCATAGACGTAAAGGGGAAAATATTCAAGCTTATCTCAAGGTAATTCTGGTTTATTAATGTGTCGTCTGATTGTTCAGTGTTCACTGTAGGATTCTAAATTGCTAATTTTTGAAATGCTGATGCATGCAAGAGTGTTGATTTGTACGGTGTTTTGTTTTCTTTATTCAATTTTCAGTTTTTTGAAGAGTTAATCCATGGAAAGGGTTCTGGCGTGAAGCTGACAGAATTAGCTGATAAACCTTTAAACAAGAAAATTAAGTTTGCAGATTCTGAGTCTTCTAGTTCTGATGATGATAATGAGGAGGAGGAGGGCGAGGATGATGATGAGAATAAGGAGGTTCCTGAGGAAGAACGCAAATCTGAGTCTCCGAAGGAGCAACATAATCCCTGTAATGAAAATGAAACAAGTGACATTCCAGATCCTCGTCAAGGGGACACTGTAGCCACCGAAAATCAAACAGGGGAAAAATCAAATGACAATGAAAAGGATATAAAGTGTCCTGATGTTCCATCGAATGAAGTTGAGGAGCCACCAAATAAGAAACACTGCATTGAAGCAGATGCATCGAAAAGTATTGTAAAGGAAAAAGAGAAGTCCATTGATCAATTGATTGAGGCTGAACTTGAGGAATTGGGAGATAAAAACAAGGTTAGTGATAGATTTTCATCGTTAAGGTTATTCTCGTTTCTTATGTTCATAATTTTTTGTTATTATAAGTTGTACAAGCGTGTGCCTGCATGATGACATGAAAATCGTATTGTATTGATTTCTCTTCCCTGAAAACTGTTTTTTCTTTTAGGGGTTTTGAATAGGTTTTTTAAAAATGCCTGCTCCAATTTTAATCTACTTAATAGGTCTTTAATACTTTAAGAAAGAATAAGAGAGAATTACTTTCTTTGTTTAATGTCTATCTGATTTAAGATTGTCAAGTTCATTGGACCTTCCTAATACTGAAGAAGTCTTGAGTCTGATAACATCCTGCAATTTGTATGAAGTGGATTAAATTGCTGGATCAAAGGTGTTAGAAAAACGTGGAGGACAAATATGAATGGAGATGATTTTTCATTCAACTAAGCATGGAAGATATAGGCTTACAAAAGTAACCATAGAATACCAATGGTTCAAAACTTTAAATGTGATAAAATGCTCATAACTCACCTAACTCCCAAAACTCAAAAGTCACTACTGGTTACAAGAAACCAAAAGCCAAAAGTCACAAAAACCAAAAGTCACACTAAATGCCACAAATAAAGTTAGATAATGAAAACTTTTGATTTTCTCAACACCCCCCTTAAACTTGATTTGTTACACCAAGTAAACTCCTCATTTTGATAAAAGTCTCCAACTTGAGGGGCTTTGTGAAAATGTCTGCCGCTTGGTCTTGTGACTTGATATATTTGAGTTCCACTTCTTTATTCGCAACGCAATCCCGAATGTAGTGAAATCGGGTATCAATGTGCTTGCTCCTCCTATGAAATACCGGATTTTTGGCTAAGGCAATGGCCGATTTGTTGTCAACAAAAATCTCCATTGGACCTTCCATTTGAAACTTCAACTCCTTCACTAAGTTTCTTAGCCAAATTGCATGACATACACATGAAGTTGTCGCGACGTACTCTGCCTCGCATGTTGATAATGTGACTATGGGTTGCTTTTTTGACATCCATGTGAACGATGTTTCACCAATAAAAAACACAAACCCCGTAGTACTCTTTCGATCATCCAAGTCACTACTTCAATCACTATCACAATATCCAACAATATCAAAATTGCTAGAAGAGACATAGGAAAGACCATACCCAATCGTCCCTTTGATGTAGCGAAGTATCCTTTTTGCCATTTTGCAATGCGTAGTTGTCGGCTCCTCCATAAATCGACTAATAATTCCAACTGAATAAAGAATATCCGGTCTTGTGCATGTCAAGTATCTCAAACTTCCAACCAAGCTTTTGAAATATGTAGAATCTACCTTCTCTCCTCCACCTTGCTTGGTGATTTTGACTCCACATTCCATCAGTGTTCCAACTGGATTAGCATCATCCATGTTGAACTTTTTGAGCATTTCTTTAGCATAGCCCTCTTGGGATATAAAAATCTCATCTTCGCTTTGTTTGACCTCGATCCCAAGATAGTAACTCATGAGACCAATGTCCGTCATTTCAAACTCCTTTGCCATCTCTCTTTTGAACTCATCAAACATGCTAGGATTGTTTCCGGTAAATACTAAATCATCAACATATAAACAAATGATTAGTATGCTTTCACCTTGCATTTTGATGTAAAGGGCATGCTCATAAGGACACTTCATATACTTCTTCTCTTGAAAATACTTGTCAATTTTCGAATTCCATGCTCTCGGTGCTTGCTTCAAACCGTAAAGAGCCTTCTTCAATCGAAGCACTTTGTTTTCTTTACCCTTGACTTCAAAACCCAATGGTTACTCCACATGGACTTCTTCCTCAAGAATTTCGTTCAAGAATGCCGATTTGACATCCATTTGATGTATTTTCCAATGATTATGAGCTGCCAAAGCAATAATCAAACGAATAGTTTCAAGGCGAACAACGGGGGCAAATACCTCATCATAGTCGATGCCATGTCGTTGACTATACCCTTTCACCACTAGTCTCGCCTTGTGCCTTTCAACATCGCTATTGGCCTTTTTCTTTGTCTTGTATACCCACTTCACTCCGATCGGTTTGTGCCCTTTTGGAAGCTTGGTCAACTCCCATGTGTCATTTTTCTCTATCGCTCGAATTTCTTCATCCATTGCATCCTTCCATTTCTTGCTTGCAATGGCTTCTTGGAAACTAATGGGCTCACAATCACCAAAAAGAAAATAGAGAATTATGTCATTTTGATTTTCATTTACCTCATTAAGTTCCTGTAGACTTCGGGTTCCTCTTGGACCAATTTCATTCTCAGAATCGCGGGATGAACCTTCAGATGACGATCGATCGGTCGAATGGGATGACACTGGATTGGGCAAAACTTCACCCATTTCATCTCTGGTTGGCTCATTTTCATCGTCTTCTTCAAAATATGGAAGGAAATCATACTCCTCCTCCTGTATATTCCAATCCCAAGATGTTTGTTCATCAAAAACAACATCACGACTAATAATTACCTTCCCATTCAAAGGATTGTAAAGGCGATAACCCTTTGAACTTGCATCATAGCCAATGAAGATGAGTTTCTTGCTTCGATCATCGAGCTTGGTCCTTTTTTCTTCCGACACATGAGCATATGCAATACTCCCAAATACCTTGAAGTGACCAATTCCGGGCTTTCTTCCATTCCAAGCTTCTTGAGGCGTCTTGTCAAGCACACTTTTGGTTGGTGCTCGATTTGTCAAATAGACCGCACAAACTACGGCCTTCGCCCAAAATTCCCTTGGCATCTTCTTTGTCTTTAGCATGCTTCTTGCCATGTTCAAGATTGTCTGATTCTTTCTCTCCACCACGCCATTTTGTTGTGGTGTCCTTGGCACTGTTAACGGACATTGGATGCCTTTTTCATCACAAAACTGTTTGAACTCATTTGATGTGAATTCACCACCTTGATCAGTTCTCATGGCCTTGATTGTAAGATTGCTTTTATTCTCCACACGTGCCTTAAATCTCTTGAAGATTTCTAATACTTTCGATTTTTCCTTCAAGAAGTACACCCATGTTTTTCTAGAAAAATCATCAATAAACAGAAGGAAGTATTTACTTTTACCATGAGACTCCGGTTTGATCATTCCACACACATCGGCATGGATGAGTTCTAGAGGCTTCTTGGCTCTTGTCATAGACTCCTTCGGAAAACTACTTCGATGATGTTTGCCAAGTAGGCATCCTTCACACACTTGGTTCGGCTTGTGAATGTGCGGTAAACCCCGCACCATCTTCTTCTTCGACAAAACTTCTAGACTTCCAAAATTGAGGTGCCCGAACCGTAGATGCCATAACCAGGAGAGATCCTCATAACACGTCTTCAAGCATTTTGGAACATCATTACATATATTCAAAGGAAACATTCGGTTTTTTGTCATGGAAACTTTAGCAATAAGTCTCTCATGATTATCCCTCAAATACAAACAATTGTTTTTCATTTGAACTTTAAAACCTTTCTCTAACAATTGTCCTACATTCAATATATTATTTTTTACATTGGGAATGTAATAAACACTTGTAATATATTGATTTTCTCCACTTTTTAACCGAATGAGAATTTTACCAATTCCTTTGATGGCGGCCAAAGAATTGTCTCCAAAGGCAATATTACCTTTCTCCGTCTCGTTCAACTCCACAAACATCTCGCGTTTTCCACACATGTGGTTTGAGGCTCCGGTGTCAAGATACCACATACTATCTTGACTCTCTTCTTCTCCCTTTGAAACCATAAATAAGGTTCCATTCTCCTCTGCATAATTAGATTGCCCTTGATGGGCTTTTGATGTGCTGGCGGTTGATTGGTCCTGATGCTTTCGATCACTTGATTCTGATTGAGATGAGTAACACTCATTTGCATAATGTCCATACTTATTATAATTATAACATTTTACCTGAGATTTATCTCTCCCGGACCTTCCACCACGTCTTCCACGACCTCGGCCTCCTCTTCCTCTTGATGAATCACACGAATTTTGAGAAACATCGGTGTTGGTTTCACCTCTTCCACCACGACCTCGACCACCACGTCCTCTTCCACGTCCACGACTATTCTCTCCTTGAGTTTGAGTTGGAGAAGTTGTTCAACGGTCTCTGTTTGCTCCATCCTCCTTTTCTTTTTCTCCTCATAGGCTTGCAACGAGCCTATAAATTGTTCAATCGTCATGATCTCGAGATCCTGTGTCTCCTCGATTGTCGTGGAAATAATCTCGAACTTTGTATTTAGGCTCCGTAGAACCTTTTCAATGACACGAACATCGGCAATTTCTTCACCGTTCCGTCTCAATTGGTTGACGACGGTCATTACTCTTGTGTGATATTCCTCTATCACCTTCGTCTCCTTCATTTGTAAAGATTCAAACTCACCACGTAAAGTTTGCAACCGTACCTTTTTCACACGATCGGCTCCTCTATGAGTCGATTGGAGCTTGTCCCATGCCGCCTTTGACGTCTCGGCATTGGCGATGGTCTCAAACGTGTCTTCGTCCACCGATTGGTACAAGATATAGAGGGCCTTCTTGTCCTTCTTTCTTGTCTCCTTTAACGCATCTCTTTGCACTTGATCGGCTCCAGCTTCCTCCTCTTGGAAACCGTTCTCCACGATCTCCCACACATCTTTTGCTCCTAGTAACGCTTTTATCTTGATGCTCCAATTGTCATAGTTGAGCTTGGAAAGCATTGGTAGTTGAAGCGAACCCATCCCACCGTTGGCCATTTCTCTCAATTTTTTTGCTACTCGCTGTGATACCACTTTGTTAGAAAAACGTGGAGGACAAATATGAATGGAGATGATTTTTCATTCAACTAAGCATGCCTTTATATAGGCTTACAAAAGTAACCATAGAATATCAATGGTTCAAAACTTTAAATGTAATAAAATTCTCATAACTCACCTAACTCTCAAAACTCAAAAGTCACTATTGGTTACAAGAAACCAAAAGCCAAAAGTCACAAAAACCAAAAGTCACACTAAATGCCACAAATAAAGTTTAATAATGAAAACTTTTGATTTTCTCAACAAAAGGTTCTTAGTCTGTTGACAGAATATGATGCTCAAATTATCTTTTGTGATTTTTATCTTACAATTTCTCTTTATGTCTTTCTTCTTCTTATGCATTATTGGGTTAAAACTTTGGATATTGACTAAATAATCTTGCAATCGATAATTTTTTTTGAGTTATGATTATGACTTACATGCTAATATTTTTAAACATCTCTATGATATTGCATTGGTTTCTTGAGTATTTTATAACTTACAGTATTATTAGTCATCCAGACTGGTACTTGATCCTTTATTATCCAATCTGCTTATCATGAAATGTGGTACAGAGACGTTTTTTCAATCTTGATTCGGGATGTAATGGTGTTGTCTTTATCCAAATGCGGAAGACTGATGGAGAACCTGGTCCTGAGGCTGTTGTGCAGCATATGATGACATCTATTGCTTCAACAAGGAAACACATTTCAAGGTTTGCATCTAGTTCTTGAATTTCTGTAAGGAACGAAGCATGAAGAAGTTCATATACTGGATCACTAAAATGCTTTATTATATGTTTGATTTATCCCAGGTTCATACTTAGAGTACTGCCTGTTGAAGTGGCATGCTATGCTTCAGGAGAGGAGATCTCGAGGGCAATAAAGCCTCTAATAGAAAAGAACTTTCCTGTTGAAAGTCAAAGTCCTAAAAAGGTATAGCCCTTATCCATTCCCTTTTTAACGGTCTCCCAATTTCAGTATCACAGTGCAACTTCCTTTGTGATAAATCCTCTATCCACAGCAAAAGAGAAGGAAAGAATAGTTTAACAAGGGTCTCCTGGAAAGTACGTAAATGAGGAACAAGAACAACTATAGATTCAATGACTATTTGAATAGAATCATCTCAACACTGCTATGTATTGGAAATAGTAATTGTCCAGATTTCTTGATGACAATATTTGTTCTAAAATTGAGGACAATTATTTTATACTTGGAGAGCTAAAACTAAAAGTATCATTGGGTTTAAAGAAGAGTAGGTTGTATATATTATGTGCTTGTAATAGTTGAAAGCTGCCAATGTAGTTGTCAACAAGGTAGAGGATGAGTAAGGAGAGTTCATGCCTATATATCTTACAATGGCTGAAAACATTTGAAGTAGTTTTGGTTGGTCAGTTCTTTACTTCTATTCTACGTACGTTTTACTATTTTAAACTCAAGGACCTGTAGAACAGATCCTATTCATGTAAGGTTGTTGCAACTTTTACTATTTTAAAATTTTATTTTCTGTAAAGTGTTATCAATAATCTATTATTAAATTTTAGAATTGCTTTATGCATTTTAAATTAATTTTGTAAATCTTTCCATATCACAAACTACTTAATAGTGATTTTTTTCCCTAATTATACTTCAAAATAACTTTTTAAATCGAAATAATCGAAATATGTTGTGTTTTCCTAGTTTCTGCAGTTTCAATGAATCTGACCCAACTCATTTTGACACCTATACTAGTCGTATGATTAAATTGCAACTTCCAATCAATAAAGACCATGGGAGAGAATGCAATTAATTGACTATAATAGACTATTTATTGATTTATTAAAGAAACTAACATCCTATAAATACTTCACAGGAAGTGAACATCAATCTCGTTTCCTAAGAGATTATTGTCTATCTATGCAATTAAGCTTTTTTCCAGGGTCTCACTGTATTTGACATGAGGATTCTATTGTTAGAATGATCACAGATTCACAAATTAATGTTTCAATTTTTATGATCTTTCTTGCAGTTTGCAGTATTATATGAGGCCCGTGCAAATACTGGCATTGACAGGGCAACTATAATTAATACTGTAGCAAAATCTGTTCCTGAGCCTCATAAAGTTGATTTGAAGAATCCTGAAAAAACTATTGTGGTTGAGATTGTCAAGGTGAGGAACTTTCTTCTTGGAAGAAAATAATCATAAAGATATCTGTTTAGAAATGATTCAGTCTATAGAATGTTTGCCATGGCCACCCAACTCAGTGGGGTGTGTGCAGCTTCAAATTATCTATTGAAGATATTAACTGCTTAGAAGGCTCTACCAGCCTGGCATATGCTGAAGCTAAATATATCTTATTAACTTTCTTTGAGGATTTAATCTAATTCTGGTTTCAGACTTGACTTCTTTAACCAAAATATGATTTTCTAGAAAAATATTTGCTTGAAGTTTTTGCTGTAAGGAACTAAAGTTCATAATTTTACCCTTACCCAAGTGAAAGGAAACTGTTGTCGAACCTCTCAAGGGTCTGTAGAACTAGTCTGCAAGTTAGACTGGGAGGCAAAAACTATGGCTTTAGAATCTGAAGAATTGCTGAACCACAAGTTTGCAACTTGTTTGGTGAGACTCGTGCCAATAGAATAGGCTGAATCAGACAGATCTTAACAACCCATGACTATCGAAAAAAAAAAAAACTTTTGATCTTCAGAGTTGCATATTCTACATGGTGTTTGCCTGACTTGTTAATTATTGTACTTCCATCTTGTGATTGCTCTGGAACTTAGACAATAAGTTCTTTAATTTGTCGAGATGAAGTTCCTTACTTTTTGTTGATTTTTCTTCAGACTATTTGCTTGATTGGAGTGGTGGAGAAGTATAAGGAGTTGTCCAAGTACAATCTGAGGCAGCTTACATCAAGAAAGCAATAGGATAGGTTATGTCTTTGTTTTTCATGTCTGTTTCTACTTTGGGCACTTTTCAATGTTCAGATGTACGGTAAATTAGAAAATTTTGGAACTAAACTAATATAGGTGTTGGCGCATAACAAAATCTGATAACCCAGCGTTTCTGGAAACTTGTCTCCAAGTCTCCATTTGATTTTTGATAGAGTTTTGTGAAAATTAAGCTTATAAATACCACTTGTTCCCAGATGTGGGTTTTTTGGGTCTGTGCAG

mRNA sequence

GGGATACAGTTTTTTTGGCTCGAACTTGCACAACTTGGAACTCTGTGTTTCACTCTGTAATGGCCGCCGAGGACAAACCCTCCGCCGGAGGCAAGAAAAGGAAGCAGCGCTATCTTCCCCACAATAAACCAGTGAAGAAGAAGGGCCATTACCCATTACGCCCAGGAGTTCAAGGTTTCTTTATCACCTGCGATGGCGGCCGAGAACGCCAAGCCTCCATTGAAGCCATCAACGTTCTTGACTCTTTTTTTGAAGAGTTAATCCATGGAAAGGGTTCTGGCGTGAAGCTGACAGAATTAGCTGATAAACCTTTAAACAAGAAAATTAAGTTTGCAGATTCTGAGTCTTCTAGTTCTGATGATGATAATGAGGAGGAGGAGGGCGAGGATGATGATGAGAATAAGGAGGTTCCTGAGGAAGAACGCAAATCTGAGTCTCCGAAGGAGCAACATAATCCCTGTAATGAAAATGAAACAAGTGACATTCCAGATCCTCGTCAAGGGGACACTGTAGCCACCGAAAATCAAACAGGGGAAAAATCAAATGACAATGAAAAGGATATAAAGTGTCCTGATGTTCCATCGAATGAAGTTGAGGAGCCACCAAATAAGAAACACTGCATTGAAGCAGATGCATCGAAAAGTATTGTAAAGGAAAAAGAGAAGTCCATTGATCAATTGATTGAGGCTGAACTTGAGGAATTGGGAGATAAAAACAAGAGACGTTTTTTCAATCTTGATTCGGGATGTAATGGTGTTGTCTTTATCCAAATGCGGAAGACTGATGGAGAACCTGGTCCTGAGGCTGTTGTGCAGCATATGATGACATCTATTGCTTCAACAAGGAAACACATTTCAAGGTTCATACTTAGAGTACTGCCTGTTGAAGTGGCATGCTATGCTTCAGGAGAGGAGATCTCGAGGGCAATAAAGCCTCTAATAGAAAAGAACTTTCCTGTTGAAAGTCAAAGTCCTAAAAAGTTTGCAGTATTATATGAGGCCCGTGCAAATACTGGCATTGACAGGGCAACTATAATTAATACTGTAGCAAAATCTGTTCCTGAGCCTCATAAAGTTGATTTGAAGAATCCTGAAAAAACTATTGTGGTTGAGATTGTCAAGACTATTTGCTTGATTGGAGTGGTGGAGAAGTATAAGGAGTTGTCCAAGTACAATCTGAGGCAGCTTACATCAAGAAAGCAATAGGATAGGTTATGTCTTTGTTTTTCATGTCTGTTTCTACTTTGGGCACTTTTCAATGTTCAGATGTACGGTAAATTAGAAAATTTTGGAACTAAACTAATATAGGTGTTGGCGCATAACAAAATCTGATAACCCAGCGTTTCTGGAAACTTGTCTCCAAGTCTCCATTTGATTTTTGATAGAGTTTTGTGAAAATTAAGCTTATAAATACCACTTGTTCCCAGATGTGGGTTTTTTGGGTCTGTGCAG

Coding sequence (CDS)

ATGGCCGCCGAGGACAAACCCTCCGCCGGAGGCAAGAAAAGGAAGCAGCGCTATCTTCCCCACAATAAACCAGTGAAGAAGAAGGGCCATTACCCATTACGCCCAGGAGTTCAAGGTTTCTTTATCACCTGCGATGGCGGCCGAGAACGCCAAGCCTCCATTGAAGCCATCAACGTTCTTGACTCTTTTTTTGAAGAGTTAATCCATGGAAAGGGTTCTGGCGTGAAGCTGACAGAATTAGCTGATAAACCTTTAAACAAGAAAATTAAGTTTGCAGATTCTGAGTCTTCTAGTTCTGATGATGATAATGAGGAGGAGGAGGGCGAGGATGATGATGAGAATAAGGAGGTTCCTGAGGAAGAACGCAAATCTGAGTCTCCGAAGGAGCAACATAATCCCTGTAATGAAAATGAAACAAGTGACATTCCAGATCCTCGTCAAGGGGACACTGTAGCCACCGAAAATCAAACAGGGGAAAAATCAAATGACAATGAAAAGGATATAAAGTGTCCTGATGTTCCATCGAATGAAGTTGAGGAGCCACCAAATAAGAAACACTGCATTGAAGCAGATGCATCGAAAAGTATTGTAAAGGAAAAAGAGAAGTCCATTGATCAATTGATTGAGGCTGAACTTGAGGAATTGGGAGATAAAAACAAGAGACGTTTTTTCAATCTTGATTCGGGATGTAATGGTGTTGTCTTTATCCAAATGCGGAAGACTGATGGAGAACCTGGTCCTGAGGCTGTTGTGCAGCATATGATGACATCTATTGCTTCAACAAGGAAACACATTTCAAGGTTCATACTTAGAGTACTGCCTGTTGAAGTGGCATGCTATGCTTCAGGAGAGGAGATCTCGAGGGCAATAAAGCCTCTAATAGAAAAGAACTTTCCTGTTGAAAGTCAAAGTCCTAAAAAGTTTGCAGTATTATATGAGGCCCGTGCAAATACTGGCATTGACAGGGCAACTATAATTAATACTGTAGCAAAATCTGTTCCTGAGCCTCATAAAGTTGATTTGAAGAATCCTGAAAAAACTATTGTGGTTGAGATTGTCAAGACTATTTGCTTGATTGGAGTGGTGGAGAAGTATAAGGAGTTGTCCAAGTACAATCTGAGGCAGCTTACATCAAGAAAGCAATAG

Protein sequence

MAAEDKPSAGGKKRKQRYLPHNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVLDSFFEELIHGKGSGVKLTELADKPLNKKIKFADSESSSSDDDNEEEEGEDDDENKEVPEEERKSESPKEQHNPCNENETSDIPDPRQGDTVATENQTGEKSNDNEKDIKCPDVPSNEVEEPPNKKHCIEADASKSIVKEKEKSIDQLIEAELEELGDKNKRRFFNLDSGCNGVVFIQMRKTDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASGEEISRAIKPLIEKNFPVESQSPKKFAVLYEARANTGIDRATIINTVAKSVPEPHKVDLKNPEKTIVVEIVKTICLIGVVEKYKELSKYNLRQLTSRKQ

Homology

[Close]

BLAST of Lcy03g009040 vs. ExPASy Swiss-Prot
Match: Q9VZD8 (THUMP domain-containing protein 1 homolog OS=Drosophila melanogaster OX=7227 GN=CG15014 PE=1 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 6.6e-21
Identity = 61/172 (35.47%), Postives = 101/172 (58.72%), Query Frame = 0


Query: 210 AELEELGDKNKRRFFNLDSGCNGVVFIQMRKTDGEPGPEAVVQHMMTSIASTRKHISRFI 269
           A+  E+  + K RF N+D+     VFI+ +  D    P A+ +H++  IA+T K +SRF+
Sbjct: 111 AKCREMLSQRKMRFQNVDTNTTNCVFIRTQLED----PVALGKHIINDIATTGKSMSRFV 170

Query: 270 LRVLPVEVACYASGEEISRAIKPLIEKNFPVESQSPKKFAVLYEARANTGIDRATIINTV 329
           LR++P+EV C A+  +I  A   L +K+F  E   P  + +++  R N  I R  II  +
Sbjct: 171 LRLVPIEVVCRANMPDIITAAGELFDKHFLKE---PTSYGIIFNHRYNQQIKRDQIITQL 230

Query: 330 AKSVPEP---HKVDLKNPEKTIVVEIVKTICLIGVVEKYKELSKYNLRQLTS 379
           A+ V      +KVDLK  +K+I+VE+++  CL+ V++ Y E  K+NL +L +
Sbjct: 231 AELVNSKNVGNKVDLKEAKKSIIVEVLRGWCLLSVIDNYLECKKFNLAELAN 275

[Close]

BLAST of Lcy03g009040 vs. ExPASy Swiss-Prot
Match: Q24K03 (THUMP domain-containing protein 1 OS=Bos taurus OX=9913 GN=THUMPD1 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.1e-18
Identity = 70/223 (31.39%), Postives = 119/223 (53.36%), Query Frame = 0


Query: 164 NEKDIKCPDVPSNEVEEPPNKKHCIEADASKSIVKEKEKSIDQLIEAEL-EELGD----- 223
           N  + KC +   + + E  +  +  E  A K       +  D  +EA L +E+GD     
Sbjct: 51  NMNERKCVEEAYSLLNEYGDDMYGPEKFADKDQQPSGSEGEDDDVEAALKKEVGDIKAST 110

Query: 224 -KNKRRFFNLDSGCNGVVFIQMRKTDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVE 283
               RRF +++SG N VVFI+    +    PE +V H++  I  T+K  +R ILR+LP+ 
Sbjct: 111 EMRLRRFQSVESGANNVVFIRTLGIE----PEKLVHHILQDIYKTKKKKTRVILRMLPIS 170

Query: 284 VACYASGEEISRAIKPLIEKNFPVESQSPKKFAVLYEARANTGIDRATIINTVA---KSV 343
             C A  E++ +  +  +E  F   ++    F ++Y++R N+ ++R  +I  +A    S+
Sbjct: 171 GTCKAFLEDMKKYAETFLEPWFKAPNKG--TFQIVYKSRNNSHMNREEVIKELAGIVGSL 230

Query: 344 PEPHKVDLKNPEKTIVVEIVKTICLIGVVEKYKELSKYNLRQL 377
              +KVDL NP+ T+VVEI+K +C + VV+ Y    KYNL+++
Sbjct: 231 NSENKVDLSNPQYTVVVEIIKAVCCLSVVKDYMLFRKYNLQEV 267

[Close]

BLAST of Lcy03g009040 vs. ExPASy Swiss-Prot
Match: Q9NXG2 (THUMP domain-containing protein 1 OS=Homo sapiens OX=9606 GN=THUMPD1 PE=1 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 4.4e-17
Identity = 64/218 (29.36%), Postives = 120/218 (55.05%), Query Frame = 0


Query: 162 NDNEKDIKCPDVPSNEVEEPPNKKHCIEADASKSIVKEKEKSIDQLIEAELEELGDKNKR 221
           N+   D+  P+  +++ ++P   +   E D +++ +K++   I    E  L        R
Sbjct: 66  NEYGDDMYGPEKFTDKDQQPSGSEG--EDDDAEAALKKEVGDIKASTEMRL--------R 125

Query: 222 RFFNLDSGCNGVVFIQMRKTDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYA 281
           RF +++SG N VVFI+    +    PE +V H++  +  T+K  +R ILR+LP+   C A
Sbjct: 126 RFQSVESGANNVVFIRTLGIE----PEKLVHHILQDMYKTKKKKTRVILRMLPISGTCKA 185

Query: 282 SGEEISRAIKPLIEKNFPVESQSPKKFAVLYEARANTGIDRATIINTVAK---SVPEPHK 341
             E++ +  +  +E  F   ++    F ++Y++R N+ ++R  +I  +A    ++   +K
Sbjct: 186 FLEDMKKYAETFLEPWFKAPNKG--TFQIVYKSRNNSHVNREEVIRELAGIVCTLNSENK 245

Query: 342 VDLKNPEKTIVVEIVKTICLIGVVEKYKELSKYNLRQL 377
           VDL NP+ T+VVEI+K +C + VV+ Y    KYNL+++
Sbjct: 246 VDLTNPQYTVVVEIIKAVCCLSVVKDYMLFRKYNLQEV 267

[Close]

BLAST of Lcy03g009040 vs. ExPASy Swiss-Prot
Match: Q99J36 (THUMP domain-containing protein 1 OS=Mus musculus OX=10090 GN=Thumpd1 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.6e-14
Identity = 79/272 (29.04%), Postives = 130/272 (47.79%), Query Frame = 0


Query: 115 KEVPEEERKSESPKEQHNPCNENETSDIPDPRQGDTVATENQTGEKSNDNEKDIKCPDVP 174
           ++ P+        K Q  P       D   PRQ          G     N  + KC +  
Sbjct: 6   QQSPQPVAGKRKGKSQFLPAKRARRGDAGGPRQ----LEPGLQGILITCNMNERKCVEEA 65

Query: 175 SNEVEEPPNKKHCIEADASKSIVKEKEKSIDQLIEAEL-EELGD------KNKRRFFNLD 234
            + + E  +  +  E    K       +  D   EA L +E+GD      K  RRF +++
Sbjct: 66  YSLLNEYGDDMYGPEKFIDKDQQPSGSEGEDDDAEAALKKEVGDIKASTEKRLRRFQSVE 125

Query: 235 SGCNGVVFIQMRKTDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASGEEIS 294
           SG N VVFI+    +    PE +V H++  +  T+K  +R ILR+LP+   C A  E++ 
Sbjct: 126 SGANNVVFIRTLGIE----PEKLVHHILQDMYKTKKKKTRVILRMLPISGTCKAFLEDMK 185

Query: 295 RAIKPLIEKNFPVESQSPKKFAVLYEARANTGIDRATIINTVA---KSVPEPHKVDLKNP 354
           +  +  +E  F   ++    F ++Y++R N+ ++R  +I  +A    S+   +KVDL NP
Sbjct: 186 KYAETFLEPWFKAPNKG--TFQIVYKSRNNSHMNREEVIKELAGIVGSLNSENKVDLTNP 245

Query: 355 EKTIVVEIVKTICLIGVVEKYKELSKYNLRQL 377
           E T+VVEI+K +C + VV+ Y    KYNL+++
Sbjct: 246 EYTVVVEIIKAVCCLSVVKDYVLFRKYNLQEV 267

[Close]

BLAST of Lcy03g009040 vs. ExPASy Swiss-Prot
Match: P87151 (Uncharacterized protein C25H2.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC25H2.10c PE=4 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 2.8e-11
Identity = 53/191 (27.75%), Postives = 95/191 (49.74%), Query Frame = 0


Query: 189 EADASKSIVKEKEKSIDQLIEAELEELGDKNKRRFFN---LDSGCNGVVFIQMRKTDGEP 248
           E  +S    +E+ + ++  +  E+  L  KNK+       LD  C  V F++ R     P
Sbjct: 69  ETQSSDQENEEEGEELEDAVAKEINSLQKKNKKELLTPIMLDMPC--VYFVKTR-----P 128

Query: 249 GPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASGEEISRAIKPLIEKNFPVESQSP 308
             + V     T      K ++R+  R++P+      S +++    K LI+  F    +  
Sbjct: 129 PIDPVRLVEFTCEVGKTKKMTRYTQRLIPIVRTTGVSLDDLEELAKSLIDPLFHEGQEGI 188

Query: 309 KKFAVLYEARANTGIDRATIINTVAKSVPEPHKVDLKNPEKTIVVEIVKTICLIGVVEKY 368
           K+FAV    R +T + +  I  TVA+ V + H VDLKN +  I+V+++K I  I +V+ +
Sbjct: 189 KEFAVQANIRNHTVLKKDDIYRTVARIVGKQHMVDLKNFKLLILVQVIKNIIGISIVQNF 248

Query: 369 KELSKYNLRQL 377
           +EL ++NL ++
Sbjct: 249 EELRRFNLNEV 252

[Close]

BLAST of Lcy03g009040 vs. ExPASy TrEMBL
Match: A0A6J1EQU7 (THUMP domain-containing protein 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111436964 PE=4 SV=1)

HSP 1 Score: 657.5 bits (1695), Expect = 3.3e-185
Identity = 345/387 (89.15%), Postives = 367/387 (94.83%), Query Frame = 0


Query: 1   MAAEDKPSAGGKKRKQRYLPHNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVL 60
           MAAE+KPS  GKKRKQRY P+NKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINV+
Sbjct: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60

Query: 61  DSFFEELIHGKGSGVKLTELADKPLNKKIKFADSESSSSDDDNEEEE------GEDDDEN 120
           DSFF+EL+HGKGSGVKLTELADKPLNKKIKF+DSESS SDDD + EE      GE++DEN
Sbjct: 61  DSFFDELVHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDGDGEEEEEEVGGENEDEN 120

Query: 121 KEVPEEERKSESPKEQHNPCNENETSDIPDPRQGDTVATENQTGEKSNDNEKDIKCPDVP 180
           KEVP+EE KS+SPKEQ++PCNENET+D+PDP QGDTVATE++T EKSNDNEKDIKCP+VP
Sbjct: 121 KEVPDEESKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVP 180

Query: 181 SNEVEEPPNKKHCIEADASKSIVKEKEKSIDQLIEAELEELGDKNKRRFFNLDSGCNGVV 240
           S EVEEPP KKHCIEADASKSIVKEKEKSIDQLIEAEL+ELGDK+KRRFFNLDSGCNGVV
Sbjct: 181 SEEVEEPPKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVV 240

Query: 241 FIQMRKTDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASGEEISRAIKPLI 300
           FIQMRK DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYAS EEISRAIKPLI
Sbjct: 241 FIQMRKNDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLI 300

Query: 301 EKNFPVESQSPKKFAVLYEARANTGIDRATIINTVAKSVPEPHKVDLKNPEKTIVVEIVK 360
           EKNFPVESQSPKKFAVLYEAR+NTGIDRATIINTVAK+VPEPHKVDL NPEKTIVVEIVK
Sbjct: 301 EKNFPVESQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVK 360

Query: 361 TICLIGVVEKYKELSKYNLRQLTSRKQ 382
           TICLIGVVEKYKELSKYNLRQLTSRKQ
Sbjct: 361 TICLIGVVEKYKELSKYNLRQLTSRKQ 387

[Close]

BLAST of Lcy03g009040 vs. ExPASy TrEMBL
Match: A0A6J1HUY9 (THUMP domain-containing protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111467052 PE=4 SV=1)

HSP 1 Score: 653.3 bits (1684), Expect = 6.3e-184
Identity = 344/386 (89.12%), Postives = 366/386 (94.82%), Query Frame = 0


Query: 1   MAAEDKPSAGGKKRKQRYLPHNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVL 60
           MAAE+KPS  GKKRKQRY P+NKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINV+
Sbjct: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60

Query: 61  DSFFEELIHGKGSGVKLTELADKPLNKKIKFADSESSSSDDDNEEEE-----GEDDDENK 120
           DSFF+EL+HGKGSGVKLTELADKPLNKKIKF+DSESS SDDD+ EEE      E++DENK
Sbjct: 61  DSFFDELVHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDDGEEEEEEVGDENEDENK 120

Query: 121 EVPEEERKSESPKEQHNPCNENETSDIPDPRQGDTVATENQTGEKSNDNEKDIKCPDVPS 180
           EVP+EE KS+SPKEQ++PCNENET+D+PDP QGDTVATE++T EKSNDNEKDIKCP+V S
Sbjct: 121 EVPDEESKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVRS 180

Query: 181 NEVEEPPNKKHCIEADASKSIVKEKEKSIDQLIEAELEELGDKNKRRFFNLDSGCNGVVF 240
            EVEEPP KKHCIEADASKSIVKEKEKSIDQLIEAEL+ELGDK+KRRFFNLDSGCNGVVF
Sbjct: 181 EEVEEPPKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVF 240

Query: 241 IQMRKTDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASGEEISRAIKPLIE 300
           IQMRK DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYAS EEISRAIKPLIE
Sbjct: 241 IQMRKNDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIE 300

Query: 301 KNFPVESQSPKKFAVLYEARANTGIDRATIINTVAKSVPEPHKVDLKNPEKTIVVEIVKT 360
           KNFPVESQSPKKFAVLYEAR+NTGIDRATIINTVAK+VPEPHKVDL NPEKTIVVEIVKT
Sbjct: 301 KNFPVESQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKT 360

Query: 361 ICLIGVVEKYKELSKYNLRQLTSRKQ 382
           ICLIGVVEKYKELSKYNLRQLTSRKQ
Sbjct: 361 ICLIGVVEKYKELSKYNLRQLTSRKQ 386

[Close]

BLAST of Lcy03g009040 vs. ExPASy TrEMBL
Match: A0A1S3BP64 (LOW QUALITY PROTEIN: THUMP domain-containing protein 1 homolog OS=Cucumis melo OX=3656 GN=LOC103492015 PE=4 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 9.1e-175
Identity = 328/384 (85.42%), Postives = 356/384 (92.71%), Query Frame = 0


Query: 1   MAAEDKPSAGGKKRKQRYLPHNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVL 60
           MAA++KPSAGGKKRKQR+LPHNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINV+
Sbjct: 1   MAADNKPSAGGKKRKQRFLPHNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60

Query: 61  DSFFEELIHGKGSGVKLTELADKPLNKKIKFADSESSSSDDDNEEEEGE---DDDENKEV 120
           DSFF+EL HGK  GVKLTELADKPLNKKIKF+DSESSSSDDD+ EEE E   DDDENK+V
Sbjct: 61  DSFFDELAHGKNCGVKLTELADKPLNKKIKFSDSESSSSDDDDNEEEEEEKGDDDENKKV 120

Query: 121 PEEERKSESPKEQHNPCNENETSDIPDPRQGDTVATENQTGEKSNDNEKDIKCPDVPSNE 180
           PEE   S+SPKEQ+ P NENET+D+ +P Q +TVA +NQ  EKSNDNE+D+KCP+VPS E
Sbjct: 121 PEE--GSKSPKEQNEPSNENETTDVVNPNQEETVALKNQKEEKSNDNERDMKCPEVPSEE 180

Query: 181 VEEPPNKKHCIEADASKSIVKEKEKSIDQLIEAELEELGDKNKRRFFNLDSGCNGVVFIQ 240
           VEEPPNKKHC+EADASKS +KEKEKSIDQLIEAEL+ELGDK KRRFFNLDSGCNGVVFIQ
Sbjct: 181 VEEPPNKKHCVEADASKSNIKEKEKSIDQLIEAELQELGDKTKRRFFNLDSGCNGVVFIQ 240

Query: 241 MRKTDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASGEEISRAIKPLIEKN 300
           MRK DGEPGP+AVVQHMMTSIASTRKHISRFILR+LP+EVACYAS EEI+RAIKPLIEKN
Sbjct: 241 MRKNDGEPGPKAVVQHMMTSIASTRKHISRFILRILPIEVACYASVEEITRAIKPLIEKN 300

Query: 301 FPVESQSPKKFAVLYEARANTGIDRATIINTVAKSVPEPHKVDLKNPEKTIVVEIVKTIC 360
           FP+ESQ+  KFAVLYEARANTGIDRATIINTVAK+VPEPHKVDL NPEKTIVVEIVKTIC
Sbjct: 301 FPIESQNAVKFAVLYEARANTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTIC 360

Query: 361 LIGVVEKYKELSKYNLRQLTSRKQ 382
           LIGVVEKYKE SKYNLRQLTSRKQ
Sbjct: 361 LIGVVEKYKEFSKYNLRQLTSRKQ 382

[Close]

BLAST of Lcy03g009040 vs. ExPASy TrEMBL
Match: A0A6J1DK01 (THUMP domain-containing protein 1 OS=Momordica charantia OX=3673 GN=LOC111021610 PE=4 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 4.4e-169
Identity = 322/381 (84.51%), Postives = 348/381 (91.34%), Query Frame = 0


Query: 1   MAAEDKPSAGGKKRKQRYLPHNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVL 60
           MAAE+KPS G KKRKQRYLPHNKPVKKKGHYPL PGVQGFF+TCDGGRERQASIEAINV+
Sbjct: 1   MAAENKPSTGAKKRKQRYLPHNKPVKKKGHYPLHPGVQGFFLTCDGGRERQASIEAINVI 60

Query: 61  DSFFEELIHGKGSGVKLTELADKPLNKKIKFADSESSSSDDDNEEEEGEDDDENKEVPEE 120
           DSFFEEL+HGK SGVKL++LADKPLNKKIKF+DSESSSSDDDNE+   E D+E +EVPEE
Sbjct: 61  DSFFEELVHGKVSGVKLSQLADKPLNKKIKFSDSESSSSDDDNED---EGDEEEEEVPEE 120

Query: 121 ERKSESPKEQHNPCNENETSDIPDPRQGDTVATENQTGEKSNDNEKDIKCPDVPSNEVEE 180
           E KS+S  EQ++P NENET++  DP QGD V TENQT EKSNDN  D+KC +V SNEVEE
Sbjct: 121 EGKSKSHTEQNDPSNENETTEKVDPHQGDAVVTENQTEEKSNDN-SDVKCHEVLSNEVEE 180

Query: 181 PPNKKHCIEADASKSIVKEKEKSIDQLIEAELEELGDKNKRRFFNLDSGCNGVVFIQMRK 240
           PP+KKHCIEAD SK++V+EK KSIDQLIEAELEELGDKNKRR FNLDSGCNGVVFIQMRK
Sbjct: 181 PPSKKHCIEADTSKNVVQEKAKSIDQLIEAELEELGDKNKRRLFNLDSGCNGVVFIQMRK 240

Query: 241 TDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASGEEISRAIKPLIEKNFPV 300
            DGEPGPE VV+HMMTSIASTRKHISRFILRVLP+EVACYAS EEISRAIKPLIEKNFPV
Sbjct: 241 GDGEPGPEDVVKHMMTSIASTRKHISRFILRVLPIEVACYASVEEISRAIKPLIEKNFPV 300

Query: 301 ESQSPKKFAVLYEARANTGIDRATIINTVAKSVPEPHKVDLKNPEKTIVVEIVKTICLIG 360
           ES+SP KFAVLYEARAN+GIDRATIINTVAK VPEPHKVDL NPEKTIVVEIVKTICLIG
Sbjct: 301 ESESPVKFAVLYEARANSGIDRATIINTVAKCVPEPHKVDLNNPEKTIVVEIVKTICLIG 360

Query: 361 VVEKYKELSKYNLRQLTSRKQ 382
           VVE+YKELSKYNLRQLTS KQ
Sbjct: 361 VVERYKELSKYNLRQLTSGKQ 377

[Close]

BLAST of Lcy03g009040 vs. ExPASy TrEMBL
Match: A0A5A7U5T9 (THUMP domain-containing protein 1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1250G00540 PE=4 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 7.1e-135
Identity = 258/310 (83.23%), Postives = 284/310 (91.61%), Query Frame = 0


Query: 1   MAAEDKPSAGGKKRKQRYLPHNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVL 60
           MAA++KPSAGGKKRKQR+LPHNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINV+
Sbjct: 1   MAADNKPSAGGKKRKQRFLPHNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60

Query: 61  DSFFEELIHGKGSGVKLTELADKPLNKKIKFADSESSSSDDDNEEEEGE---DDDENKEV 120
           DSFF+EL HGK  GVKLTELADKPLNKKIKF+DSESSSSDDD+ EEE E   DDDENK+V
Sbjct: 61  DSFFDELAHGKNCGVKLTELADKPLNKKIKFSDSESSSSDDDDNEEEEEEKGDDDENKKV 120

Query: 121 PEEERKSESPKEQHNPCNENETSDIPDPRQGDTVATENQTGEKSNDNEKDIKCPDVPSNE 180
           PEE   S+SPKEQ+ P NENET+D+ +P Q +TVA ENQ  EKSNDNE+D+KCP+VPS E
Sbjct: 121 PEE--GSKSPKEQNEPSNENETTDVVNPNQEETVAPENQKEEKSNDNERDMKCPEVPSEE 180

Query: 181 VEEPPNKKHCIEADASKSIVKEKEKSIDQLIEAELEELGDKNKRRFFNLDSGCNGVVFIQ 240
           VEEPPNKKHC+EADASKS +KEKEKSIDQLIEAEL+ELGDK KRRFFNLDSGCNGVVFIQ
Sbjct: 181 VEEPPNKKHCVEADASKSNIKEKEKSIDQLIEAELQELGDKTKRRFFNLDSGCNGVVFIQ 240

Query: 241 MRKTDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASGEEISRAIKPLIEKN 300
           MRK DGEPGP+AVVQHMMTSIASTRKHISRFILR+LP+EVACYAS EEI+RAIKPLIEKN
Sbjct: 241 MRKNDGEPGPKAVVQHMMTSIASTRKHISRFILRILPIEVACYASVEEITRAIKPLIEKN 300

Query: 301 FPVESQSPKK 308
           FP+ESQ+  K
Sbjct: 301 FPIESQNAVK 308

[Close]

BLAST of Lcy03g009040 vs. NCBI nr
Match: XP_022930547.1 (THUMP domain-containing protein 1 homolog [Cucurbita moschata])

HSP 1 Score: 657.5 bits (1695), Expect = 6.9e-185
Identity = 345/387 (89.15%), Postives = 367/387 (94.83%), Query Frame = 0


Query: 1   MAAEDKPSAGGKKRKQRYLPHNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVL 60
           MAAE+KPS  GKKRKQRY P+NKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINV+
Sbjct: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60

Query: 61  DSFFEELIHGKGSGVKLTELADKPLNKKIKFADSESSSSDDDNEEEE------GEDDDEN 120
           DSFF+EL+HGKGSGVKLTELADKPLNKKIKF+DSESS SDDD + EE      GE++DEN
Sbjct: 61  DSFFDELVHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDGDGEEEEEEVGGENEDEN 120

Query: 121 KEVPEEERKSESPKEQHNPCNENETSDIPDPRQGDTVATENQTGEKSNDNEKDIKCPDVP 180
           KEVP+EE KS+SPKEQ++PCNENET+D+PDP QGDTVATE++T EKSNDNEKDIKCP+VP
Sbjct: 121 KEVPDEESKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVP 180

Query: 181 SNEVEEPPNKKHCIEADASKSIVKEKEKSIDQLIEAELEELGDKNKRRFFNLDSGCNGVV 240
           S EVEEPP KKHCIEADASKSIVKEKEKSIDQLIEAEL+ELGDK+KRRFFNLDSGCNGVV
Sbjct: 181 SEEVEEPPKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVV 240

Query: 241 FIQMRKTDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASGEEISRAIKPLI 300
           FIQMRK DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYAS EEISRAIKPLI
Sbjct: 241 FIQMRKNDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLI 300

Query: 301 EKNFPVESQSPKKFAVLYEARANTGIDRATIINTVAKSVPEPHKVDLKNPEKTIVVEIVK 360
           EKNFPVESQSPKKFAVLYEAR+NTGIDRATIINTVAK+VPEPHKVDL NPEKTIVVEIVK
Sbjct: 301 EKNFPVESQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVK 360

Query: 361 TICLIGVVEKYKELSKYNLRQLTSRKQ 382
           TICLIGVVEKYKELSKYNLRQLTSRKQ
Sbjct: 361 TICLIGVVEKYKELSKYNLRQLTSRKQ 387

[Close]

BLAST of Lcy03g009040 vs. NCBI nr
Match: KAG6588199.1 (THUMP domain-containing protein 1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 653.7 bits (1685), Expect = 1.0e-183
Identity = 343/387 (88.63%), Postives = 367/387 (94.83%), Query Frame = 0


Query: 1   MAAEDKPSAGGKKRKQRYLPHNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVL 60
           MAAE+KPS  GKKRKQRY P+NKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINV+
Sbjct: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60

Query: 61  DSFFEELIHGKGSGVKLTELADKPLNKKIKFADSESSSSDDDNEEEEGEDD------DEN 120
           DSFF+EL+HGKGSGVKLTELADKPLNKKIKF+DSESS SDDD++ EE E++      DEN
Sbjct: 61  DSFFDELVHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDDDGEEEEEEVGDENKDEN 120

Query: 121 KEVPEEERKSESPKEQHNPCNENETSDIPDPRQGDTVATENQTGEKSNDNEKDIKCPDVP 180
           KEVP+EE KS+SPKEQ++PCNENET+D+PDP QGDTVATE++T EKSNDNEKDIKCP+VP
Sbjct: 121 KEVPDEESKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVP 180

Query: 181 SNEVEEPPNKKHCIEADASKSIVKEKEKSIDQLIEAELEELGDKNKRRFFNLDSGCNGVV 240
           S EVEEPP KKHCIEADASKSIVKEKEKSIDQLIEAEL+ELGDK+KRRFFNLDSGCNGVV
Sbjct: 181 SEEVEEPPKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVV 240

Query: 241 FIQMRKTDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASGEEISRAIKPLI 300
           FIQMRK DGEPGPEAVVQH+MTSIASTRKHISRFILRVLPVEVACYAS EEISRAIKPLI
Sbjct: 241 FIQMRKNDGEPGPEAVVQHIMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLI 300

Query: 301 EKNFPVESQSPKKFAVLYEARANTGIDRATIINTVAKSVPEPHKVDLKNPEKTIVVEIVK 360
           EKNFPVESQSPKKFAVLYEAR+NTGIDRATIINTVAK+VPEPHKVDL NPEKTIVVEIVK
Sbjct: 301 EKNFPVESQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVK 360

Query: 361 TICLIGVVEKYKELSKYNLRQLTSRKQ 382
           TICLIGVVEKYKELSKYNLRQLTSRKQ
Sbjct: 361 TICLIGVVEKYKELSKYNLRQLTSRKQ 387

[Close]

BLAST of Lcy03g009040 vs. NCBI nr
Match: XP_022967605.1 (THUMP domain-containing protein 1 homolog [Cucurbita maxima])

HSP 1 Score: 653.3 bits (1684), Expect = 1.3e-183
Identity = 344/386 (89.12%), Postives = 366/386 (94.82%), Query Frame = 0


Query: 1   MAAEDKPSAGGKKRKQRYLPHNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVL 60
           MAAE+KPS  GKKRKQRY P+NKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINV+
Sbjct: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60

Query: 61  DSFFEELIHGKGSGVKLTELADKPLNKKIKFADSESSSSDDDNEEEE-----GEDDDENK 120
           DSFF+EL+HGKGSGVKLTELADKPLNKKIKF+DSESS SDDD+ EEE      E++DENK
Sbjct: 61  DSFFDELVHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDDGEEEEEEVGDENEDENK 120

Query: 121 EVPEEERKSESPKEQHNPCNENETSDIPDPRQGDTVATENQTGEKSNDNEKDIKCPDVPS 180
           EVP+EE KS+SPKEQ++PCNENET+D+PDP QGDTVATE++T EKSNDNEKDIKCP+V S
Sbjct: 121 EVPDEESKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVRS 180

Query: 181 NEVEEPPNKKHCIEADASKSIVKEKEKSIDQLIEAELEELGDKNKRRFFNLDSGCNGVVF 240
            EVEEPP KKHCIEADASKSIVKEKEKSIDQLIEAEL+ELGDK+KRRFFNLDSGCNGVVF
Sbjct: 181 EEVEEPPKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVF 240

Query: 241 IQMRKTDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASGEEISRAIKPLIE 300
           IQMRK DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYAS EEISRAIKPLIE
Sbjct: 241 IQMRKNDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIE 300

Query: 301 KNFPVESQSPKKFAVLYEARANTGIDRATIINTVAKSVPEPHKVDLKNPEKTIVVEIVKT 360
           KNFPVESQSPKKFAVLYEAR+NTGIDRATIINTVAK+VPEPHKVDL NPEKTIVVEIVKT
Sbjct: 301 KNFPVESQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKT 360

Query: 361 ICLIGVVEKYKELSKYNLRQLTSRKQ 382
           ICLIGVVEKYKELSKYNLRQLTSRKQ
Sbjct: 361 ICLIGVVEKYKELSKYNLRQLTSRKQ 386

[Close]

BLAST of Lcy03g009040 vs. NCBI nr
Match: XP_023531982.1 (THUMP domain-containing protein 1 homolog [Cucurbita pepo subsp. pepo] >KAG7022095.1 THUMP domain-containing protein 1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 647.9 bits (1670), Expect = 5.5e-182
Identity = 341/387 (88.11%), Postives = 364/387 (94.06%), Query Frame = 0


Query: 1   MAAEDKPSAGGKKRKQRYLPHNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVL 60
           MAAE+KPS  GKKRKQRY P+NKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINV+
Sbjct: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60

Query: 61  DSFFEELIHGKGSGVKLTELADKPLNKKIKFADSESSSSDDDNEEEE------GEDDDEN 120
           DSFF+E +HGKGSGVKLTELADKPLNKKIKF+DSESS SDDD++ EE       E++DEN
Sbjct: 61  DSFFDEFVHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDDDGEEEEEEVGDENEDEN 120

Query: 121 KEVPEEERKSESPKEQHNPCNENETSDIPDPRQGDTVATENQTGEKSNDNEKDIKCPDVP 180
           KEVPEEE KS+SPKEQ++PCNEN+T+D+PD  QGD VATE++T EKSNDNEKDIKCP+VP
Sbjct: 121 KEVPEEESKSKSPKEQNDPCNENKTTDVPDTHQGDIVATESRTEEKSNDNEKDIKCPEVP 180

Query: 181 SNEVEEPPNKKHCIEADASKSIVKEKEKSIDQLIEAELEELGDKNKRRFFNLDSGCNGVV 240
           S EVEEPP KKHCIEADASKSIVKEKEKSIDQLIEAEL+ELGDK+KRRFFNLDSGCNGVV
Sbjct: 181 SEEVEEPPKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVV 240

Query: 241 FIQMRKTDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASGEEISRAIKPLI 300
           FIQMRK DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYAS EEISRAIKPLI
Sbjct: 241 FIQMRKNDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLI 300

Query: 301 EKNFPVESQSPKKFAVLYEARANTGIDRATIINTVAKSVPEPHKVDLKNPEKTIVVEIVK 360
           EKNFPVESQSPKKFAVLYEAR+NTGIDRATIINTVAK+VPEPHKVDL NPEKTIVVEIVK
Sbjct: 301 EKNFPVESQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVK 360

Query: 361 TICLIGVVEKYKELSKYNLRQLTSRKQ 382
           TICLIGVVEKYKELSKYNLRQLTSRKQ
Sbjct: 361 TICLIGVVEKYKELSKYNLRQLTSRKQ 387

[Close]

BLAST of Lcy03g009040 vs. NCBI nr
Match: KAG7022121.1 (THUMP domain-containing protein 1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 632.9 bits (1631), Expect = 1.8e-177
Identity = 345/440 (78.41%), Postives = 367/440 (83.41%), Query Frame = 0


Query: 1   MAAEDKPSAGGKKRKQRYLPHNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVL 60
           MAAE+KPS  GKKRKQRY P+NKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINV+
Sbjct: 1   MAAENKPSTAGKKRKQRYRPNNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVI 60

Query: 61  DS-----------------------------------------------------FFEEL 120
           DS                                                     FF+EL
Sbjct: 61  DSYDFAPFYCFWVMIINCSFFKCYTYMFVLFKGFTVDFFTRTLIFTYSFSLFHFQFFDEL 120

Query: 121 IHGKGSGVKLTELADKPLNKKIKFADSESSSSDDDNEEEE------GEDDDENKEVPEEE 180
           +HGKGSGVKLTELADKPLNKKIKF+DSESS SDDD + EE      GE++DENKEVP+EE
Sbjct: 121 VHGKGSGVKLTELADKPLNKKIKFSDSESSGSDDDGDGEEEEEEVGGENEDENKEVPDEE 180

Query: 181 RKSESPKEQHNPCNENETSDIPDPRQGDTVATENQTGEKSNDNEKDIKCPDVPSNEVEEP 240
            KS+SPKEQ++PCNENET+D+PDP QGDTVATE++T EKSNDNEKDIKCP+VPS EVEEP
Sbjct: 181 SKSKSPKEQNDPCNENETTDVPDPHQGDTVATESRTEEKSNDNEKDIKCPEVPSEEVEEP 240

Query: 241 PNKKHCIEADASKSIVKEKEKSIDQLIEAELEELGDKNKRRFFNLDSGCNGVVFIQMRKT 300
           P KKHCIEADASKSIVKEKEKSIDQLIEAEL+ELGDK+KRRFFNLDSGCNGVVFIQMRK 
Sbjct: 241 PKKKHCIEADASKSIVKEKEKSIDQLIEAELQELGDKSKRRFFNLDSGCNGVVFIQMRKN 300

Query: 301 DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASGEEISRAIKPLIEKNFPVE 360
           DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYAS EEISRAIKPLIEKNFPVE
Sbjct: 301 DGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASVEEISRAIKPLIEKNFPVE 360

Query: 361 SQSPKKFAVLYEARANTGIDRATIINTVAKSVPEPHKVDLKNPEKTIVVEIVKTICLIGV 382
           SQSPKKFAVLYEAR+NTGIDRATIINTVAK+VPEPHKVDL NPEKTIVVEIVKTICLIGV
Sbjct: 361 SQSPKKFAVLYEARSNTGIDRATIINTVAKAVPEPHKVDLNNPEKTIVVEIVKTICLIGV 420

[Close]

BLAST of Lcy03g009040 vs. TAIR 10
Match: AT5G12410.1 (THUMP domain-containing protein )

HSP 1 Score: 377.5 bits (968), Expect = 1.3e-104
Identity = 220/385 (57.14%), Postives = 271/385 (70.39%), Query Frame = 0


Query: 12  KKRKQRYLPHNKPVKKKGHYPLRPGVQGFFITCDGGRERQASIEAINVLDSFFEELIHGK 71
           KKRKQ Y P N+PVKKKG YPL+PGVQGFFI+CDGGRE QA+ EAINV+DSFFEELI G 
Sbjct: 8   KKRKQHYRPQNRPVKKKGSYPLKPGVQGFFISCDGGREFQAAQEAINVIDSFFEELIQGT 67

Query: 72  GSGVKLTELADKPLNKKIKFADSESSSSDDD----NEEEEGEDDDE--------NKEVPE 131
            S V    L   P+NKK+ F+ SE    ++D     EEEE + D +        N  V E
Sbjct: 68  DSKVN-PGLFGNPINKKVTFSYSEDEDEEEDESNNGEEEENKGDGDKAVVSEGGNDLVNE 127

Query: 132 EERKSESPKEQHNPCNENE-----TSDIPDPRQGDTVATENQTGEKSNDNEKDIKCPDVP 191
           +E  SE   +Q    NE E     + ++    + +TV  E   G + N            
Sbjct: 128 KEIASEGVNDQ---VNEKEIASEGSCEVKQLAENETVKEEEDKGNQKNGG---------- 187

Query: 192 SNEVEEPPNKKHCI-EADASKSIVKEKEKSIDQLIEAELEELGDKNKRRFFNLDSGCNGV 251
               +EPP KK C  EA+    + +  EKSID+LIEAEL+ELGDK+KRRF  LD GCNG+
Sbjct: 188 ----DEPPRKKTCTEEANPLAKVNENAEKSIDKLIEAELKELGDKSKRRFMKLDPGCNGL 247

Query: 252 VFIQMRKTDGEPGPEAVVQHMMTSIASTRKHISRFILRVLPVEVACYASGEEISRAIKPL 311
           VFIQM+K DG+P P+ +VQH MTS A+T+KH+SRFILR+LP+EV+CY S EEISRAIKPL
Sbjct: 248 VFIQMKKRDGDPSPKEIVQHAMTSAAATKKHMSRFILRLLPIEVSCYPSEEEISRAIKPL 307

Query: 312 IEKNFPVESQSPKKFAVLYEARANTGIDRATIINTVAKSVPEPHKVDLKNPEKTIVVEIV 371
           +E+ FP+E+++P+KFAVLY ARANTG+DR  IINT+AKS+P PHKVDL NPE TIVVEI+
Sbjct: 308 VEQYFPIETENPRKFAVLYGARANTGLDRMKIINTIAKSIPAPHKVDLSNPEMTIVVEII 367

Query: 372 KTICLIGVVEKYKELSKYNLRQLTS 379
           KT+CLIGVVEKYKEL+KYNLRQLTS
Sbjct: 368 KTVCLIGVVEKYKELAKYNLRQLTS 374

The following BLAST results are available for this feature:

BLAST of Lcy03g009040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9VZD8	6.6e-21	35.47	THUMP domain-containing protein 1 homolog OS=Drosophila melanogaster OX=7227 GN=...	[more]
Q24K03	3.1e-18	31.39	THUMP domain-containing protein 1 OS=Bos taurus OX=9913 GN=THUMPD1 PE=2 SV=1	[more]
Q9NXG2	4.4e-17	29.36	THUMP domain-containing protein 1 OS=Homo sapiens OX=9606 GN=THUMPD1 PE=1 SV=2	[more]
Q99J36	1.6e-14	29.04	THUMP domain-containing protein 1 OS=Mus musculus OX=10090 GN=Thumpd1 PE=1 SV=1	[more]
P87151	2.8e-11	27.75	Uncharacterized protein C25H2.10c OS=Schizosaccharomyces pombe (strain 972 / ATC...	[more]

BLAST of Lcy03g009040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EQU7	3.3e-185	89.15	THUMP domain-containing protein 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1HUY9	6.3e-184	89.12	THUMP domain-containing protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A1S3BP64	9.1e-175	85.42	LOW QUALITY PROTEIN: THUMP domain-containing protein 1 homolog OS=Cucumis melo O...	[more]
A0A6J1DK01	4.4e-169	84.51	THUMP domain-containing protein 1 OS=Momordica charantia OX=3673 GN=LOC111021610...	[more]
A0A5A7U5T9	7.1e-135	83.23	THUMP domain-containing protein 1-like protein OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of Lcy03g009040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930547.1	6.9e-185	89.15	THUMP domain-containing protein 1 homolog [Cucurbita moschata]	[more]
KAG6588199.1	1.0e-183	88.63	THUMP domain-containing protein 1-like protein, partial [Cucurbita argyrosperma ...	[more]
XP_022967605.1	1.3e-183	89.12	THUMP domain-containing protein 1 homolog [Cucurbita maxima]	[more]
XP_023531982.1	5.5e-182	88.11	THUMP domain-containing protein 1 homolog [Cucurbita pepo subsp. pepo] >KAG70220...	[more]
KAG7022121.1	1.8e-177	78.41	THUMP domain-containing protein 1-like protein [Cucurbita argyrosperma subsp. ar...	[more]

BLAST of Lcy03g009040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12410.1	1.3e-104	57.14	THUMP domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004114	THUMP domain	SMART	SM00981	THUMP_a_2	coord: 271..363 e-value: 2.0E-8 score: 44.0
IPR004114	THUMP domain	PFAM	PF02926	THUMP	coord: 262..362 e-value: 4.0E-14 score: 52.9
IPR004114	THUMP domain	PROSITE	PS51165	THUMP	coord: 257..363 score: 19.344021
None	No IPR available	GENE3D	3.30.2300.10	THUMP superfamily	coord: 280..363 e-value: 7.1E-25 score: 89.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..158
None	No IPR available	PANTHER	PTHR13452:SF10	THUMP DOMAIN-CONTAINING PROTEIN 1	coord: 4..379
None	No IPR available	SUPERFAMILY	143437	THUMP domain-like	coord: 282..362
IPR040183	THUMP domain-containing protein 1-like	PANTHER	PTHR13452	THUMP DOMAIN CONTAINING PROTEIN 1-RELATED	coord: 4..379
IPR040183	THUMP domain-containing protein 1-like	CDD	cd11717	THUMP_THUMPD1_like	coord: 221..363 e-value: 1.93534E-44 score: 149.271

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g009040.1	Lcy03g009040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006400	tRNA modification
molecular_function	GO:0003723	RNA binding