Lcy03g008980 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g008980
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	zinc finger CCCH domain-containing protein 55-like
Location	Chr03: 41708824 .. 41715054 (+)
RNA-Seq Expression	Lcy03g008980
Synteny	Lcy03g008980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAGAGAGAGAGAGAGAGAGAAGTTGTCACTTGCTGCCTCTTACTCTACTAAGCAAACCCACTTCTCTAAACACTTGAAAACCCTACTGATTTGTGAGCCCATTGTGTTTGTTTCTGGGAAAAAGAGGGATTTTCTCGAGACCCAGTGAGGTTTTGAGGATTTAGCTTCTTGGGTTTTGTTCTGGGTTGTGTTTTCTTTGGCGGGTTTGATTGAAGAAACAGAGGAGAAAGTGAAGTTGAAGCAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAAAATGGATGCTTATGAAGCAACTACTTTGGTTTATGCCAAGATCAAGAACTTGGAGCCTGAGAATGCTTCGAAAATCATGGGGTTTCTTCTCATTCAAGACCTTGGTGATAAGGAGTTGATACGCTTGGCTTTTGGGCCTGAAACCCTTTTGCATTCACTGATTTTGAAGGCCAAAGCTCATTTAGGGTTTTCTTTGAACTCTTCTTCTTCAACTCCTTCTTCGCCTTCGCCTCTTAATCCCATCGCTAGACCCTCTAACAGTAACCCTTTCTCTCAATCTTCGCCTAGAATCCCTAATAATGGCTTTGACTTGACTAAAAACCCTTCTTCTCCTTCGTCAACGAGTTCATGGTCGCTTTCAGGCATCACTAACAATGTCATTAGCCCCAAATCTAGTCCCCTTCTCTCTTACGACAGTATTCGAGCTGCCCCTTTTTCAATGCCTCCATATATGCAGCACAAAAATGGGTTTGTCGATTCTGAAGTCATTGAGGAGCCTCAAGTTAACGATTACCTTTCGTTTCTCAACGAGTCATCTTCTTCGAGAGGTGAGGATTTGGTGGATCCGAGGATGGAATTAGGGCGTGGTTTGCAGAATTGGACTCAGTCTATGGACAATGCTGAGACCCCTTTTCATAGAAGAAGCTATTCTGCTAGTGATGTTTGTTTTGGCTCTGAAGATGGAGGATTTGGAGTTGGGTATAAGCCTTGTCTTTACTTTGCTAGAGGTTTTTGTAAAAATGGTAGCAATTGCAAGTTCTTGCATGGCGATTTTTCTGATTCAGTTGATCCTTCTGCTGCCATTGTTGGTTCTCCTAGCAAACTAGAGGGCTTGTTCGAGCAGCGTGAGGAGTTGATGAGATATAAGGCTGCTCAGCAGCAGAGGTTGGCCACTGCATCTGAGTTGATGGCTGGAGTGTCACCTTCACAGTATAACAAGTATATCAACTTTCTTCTGCAACAACAGAATGAAACTCATAGGTATGCATGATGGAGATGGATAACCAACTTTAGTCTTTTGACTTGTCATTCTTCTATTTATAGTGTATGAAGCCCATAATAGTTTAATTTTTTGGTGGATTTTAGTTTGTGAATGGTCAGTAATGCAATCTTTATTCTTTATTTGGAATGGATAATCTAGAGCTACAGCAGCAGCCCTTATGATGGGAGATGAGTATCACAAGTTTGGCATGTCCAGAAGTGAAAGGAATGATTTTTTGGCTTTGGCTGCTGAGAAGCGAAACTCGGCGTCGAGACAGATTTATTTAACATTCCCAGCTGATAGCACCTTCAAGGATGAAGATGTTTCAGAGTATTTCAGGTAACTAATGAGGTGTGGTGGCCTTTTTTCTGGGTGTTAAAATATCTAAACGAACCATTCATGTCATTGTCGCCCCAATTGTCTGAGAATCCGACTTTGAGTAAGAGGATTATGTATGAGAAATCTAGTCTGAAATATTCTTCTGTTTTTTATTACTGCTCACTTTGAATTTTTCAGCAACTTGCCTGCATCTGATTCCTAGTTTTCTGTATTAAAACTTTTCAGGGTTTTAAGGAGGCTGGCCATTGAGGTTTTTTAATGCATAGTGAAATAAGCCTAAGTTCCAGCACAAATGCTTTCCCTTTGTGCTGATACTTAACAAATAACCATATCTTACTTAATTGCCCGTTTACTGGAATCACGAGCTTTCCTTCATGTTCTATGCCCCTGCTTTCTGTTCAAACCTTTGTTCTATTACAACTTCGGTTTCAGAATGAGGGCTACTTTTTTCATTTCCTTGTGAGATTCTTTGAATGTACTTACTTCTCAATACATGTAAATGTGGTTAGATGGTTCGATATTCGATTGATATTTGTTCAATTGATATTTGAGCTTGACACATTCTTTCTTCCTACCTAGTTCACACAGACTTGAACTTCAATTCAGAGGATTTTAGATTTTCAGTTCTAGCAAATCTAATAGAATGAAAGAGTTTCTTAAGGTGTTATTTTGTTTTGTAAAGATTTCTTTCATTCAACGACATTCAATTGGATGTAGTTTTGTAAGTAGCCAATGTCGTCAGGTTATCCATCTTTCTGTACTTGTACTTGGAAGATGTCTTAACTTCTTTCTATCTTCCCGTGAATGTTTCTTTGCCTATACTTTTACCTCAATGAGTCAATGACTTTACATTCCTTCCTTTCCCAGTTGCTTTTATCATCATCCCCTATGATATGAGATTTAAACTTAAAATATATTGTGCTTTCTCTATTGTGTTGTTTGCTTATTGTTTTATTTTATTTTATTTTTTGTTCTTTTTCCTAACAAAAGAATAAAAGAAAAGAAAAGCTAAAGATCTGAGTACATCTTGAAGAAGTGTGCACACTATGTTACACAAACACTGAATGAATGACATAGGTAAAATGCACTTTATATGCACATGTTTGTTTACGCACCTATGTGTTTCATGTGAATACTTGCATATTCAGTCAGACATTTACTTTTATTAGAAATAAAACAAAAAAATATTTATATGTACAATTTTATAGATTTTGAGGTTGCAAAATGCCAAAACAAAGGGTTACAAATGAATCTGAATTCACATTGTTTTATTCAACGATGTGCTTAAGAGTATGCCTTTGAAATAAAAAAGCTGCACTTTTTGCTACATCATACACTTTTTTTTTGCTGCTGAGAAAAAAAAAAGACATGCAGTTTTTGAAAATATATGAATCTGTCTTAGTTTAATGGTATGAGGTTTTTTTTTTGTCGATTTGATTTGCTTGATTTGTAAATCAATTGTCCATAATCTACATTGAAGCAAATTGTTTACAATAATTGGCTTTCACTTTAGATGCACTGCACATCAATTGGGGAGCAGCCTTTCTTTTGAACTCTAGTAATTTTGAGCTCTTGGGTGCCATGTTTTAGTTGAAAATCTTGAAATTACTATCTGATATCTACTCTGTTTCTGCAACCTATGAATACCTTGTTTGTTATTTAGTGGACGTGGAAATAGTTTTCTCTTACTGAAGCTCAATCATACAATGTGAGGAATTATGTCCTGATGGGCAATAAAATGTAGCTCGAGCTATGAATAGTTGCTCAAGGAACAGTTTAGAAGTCTGGTATGGAGGTTTGAATGGAAGGGTTCTTATTATTTAGCCTGTCATGATAAAAGCCATGTATTTTCATGAAGTGCTTTTATTGCTTGACCATTTTTTTTTTCATTGATTAAATCTTGATGAACTTTTTTTTTTGGCAGCAAATTTGGGCCTGTGCAAGATGTTAGGATTCCATACCAACAGAAGAGGATGTTTGGATTTGTTACATTTGTCTATCCAGAAACCGTTAAACATATATTGGCAAAGGGAAATCCACATTTCATATGTGAATCACGAGTACTTGTGAAACCCTACAAGGAGAAGGGAAAAGTTCCAGAAAAGTAAATTTACCATAAACTTTTTTGTGTTCTATACAGTTCCCTTTCTACCTTTATAGCAGTGATGTTTATAGTTGGGATGGAATGTAGGAGGCAGCAGCATCAACAACAGCAACTAGAGAGGGGCGACTTTTCTCCTTGTTTGAGCCCCTCTGGACTGGATGCTCGGGATCCTTATGACCTAAACCTTGGTATGAAATAAGTCGGCATGCCCACTTCCCCCAAATTTGACAGCCATTTGGTTATTGAAAAACTGGTGGAAATGATTGAATATGCCATTCTTTATCTTTTGTATTTGCAATGAAACGGTATGCCTCTCATTGGTTATTCATCTGTCCATTAAATTTACAGGAGCAAGAATGATGTATAATACTCAAGGGATGATGTTGCGTAGGAAACTAGAAGAGCAAGTTGAATTGCAGCAAGCCCTTGAACTTCAGGGAAGAAGACTATTGAATCTCCAGCTTCCCGACTTGAAGAACGATCAGCTACACCACCATCACCCACATAATTTACCTATTTGTGCTCCATTGTCCACTGAATCGCATAATCAAATGAACCAGAATATTTATCCTCCTGATTTTATTAATCAAGAACCTTCTGAAGGTTTGCTGATTCTTCATGGTCTTCTCTCCTTTCTTTTGCTTAAAGGTGTTCAATCACCTGATGACTTCTTCGGTTAGCTAATGGTGAGAGCTGTTTCAGGTCATGAGAATAACCAAGTAACTACCAACAATGCCATAAGCACACAGCAAAATTTCCAGCTGGAAGAGAATCCTTGTTTTATCCAAAGCAACAGCAGTGGGAAAGCCACAGAGGACGGTTACAACTCTGAACTGCTTGAAATCCACAAAAGGTCTAAAATTTAATTTCTAATTAAAACGTACTGAGGATGGTCCAATTCAATTTCTTGCTCCAGATTATTTTAATCATACAACGTATTAACCATATTCTTCTTCTATCTTATTTACTTTGGGCATGAGGTCAGTGTTGAGCAGGTCCTTCCTGATAGCCCATTTGCTTCTCCTAAAAAATCTGCCTTGGGTCAACATTCTGATTTTTCTTCTGTTAAAGCGGATGGGTGCGGTCCCAATACGTTACCGTCATCTTCTCAGAGCAACTCGTCACTGCCTACTGGTCCTGCTGGTGACATAGCTTCCCCTTAATAACTTTTTACCCCACAGCTGAATGGCAAGGTCCTGTTATTCTCTTCCTTGTGGTAGCAAACTTTCCGTCGTGCTAATTTAAGAAGTCAGTATAATTCAAAGTAAGATACATTACTTTCCTTAGGTTTCTATTCCTTGTGTGAATCTTTTGAAATATAGGCAATAACTACATGAGCATGGCCAGCAAATATCAACAATGTTAGGGTAAGACTCTACTGATCTCTTCCTCCTCGACTTTCTTCTATTTTTGGAGCATCGTGTTCGGAGTTCTAGCGAATGAAACTGCTAATGGTCTTCGTATTTTATCTACGCAGAAAAATTAGAGAAGCATATAGCAGGCAGAAGAATTATCCCCGGATGTATAGCGAAATTATACCTACTTTGAAGAGTAGATCTATTACTATATAGAGAGGATCTCCACAAGTATCATCTTCATCAATACATACTCCTAACAGAAAATACATATAAATTCATACATTTAGGACAGATGATTTGGTTTATGAGAGTTAGGGTCTTCTGTGTTTATTTTGTGCCCTATTTGGGTGTGTGCTGGACCATGCTGACTAAAGAACTACGGTCGGATTAACTCCGTTTTACATTGTTCATCTACACATAAGTTCTTCTGTTTGTTCTTGGCATTCATAGTTAGGTAGAGTTTGAAGTTTCTGTGAAGCTCACAAGAGCCTCTTGTGTACATAGTAGTAGGGTCCTAAGTAGACAGAAGAAGACTTGAAAAAATTTGTTGTAGCTCACTGATGAAATATCACAAAACTCATTGGGACCAAAGAAAGTTGGGGTTGGTTACCCAAAGAGCTGGGTTTACTTTTCCCTTTTTTTATTTTTTCTCCCTTTTCTTTTCCTCCTCTAGATATATAATAATTTGATGATAGTATTCCTTTTCTTTGATGTGTTGAATTGAAATTGAGTGGATGAGCAGACAGGGTTTTGCAAATTGACAAAACAAGGACAAAATTGGATTTTGATTTGGTTTGTGAAAGTTTTAACTTTAGAGGACTGTTTTGTCTCACACTGTTCCTGTTTAGGCCCACACATGGGGGAAGGACCAAGGGTATCACATGGGGCACTGACATGGTATAAATGGCATCAACCCAACACCTCCCCCTCCCTTTTCTCTGTAGATTATTGTAAATTATTTTTTTATATATATGTTTTTGTTATTGTTTGTGATGTGCATTGTTTTGTGTGCATTGGAGGGAGTGAGGGGGGAGGCCCCAACTTTTGTACTGGCATGAATTTAAATTATATGGTAGCTTTTTTTACAGTTTTTGCTGGTTTGTTCTGGCTTCCATCAGAAGTGGTTGTGGTTGAATATGGTGCACACATGTGAACTGAACTTAGCTGTTCT

mRNA sequence

AGAGAGAGAGAGAGAGAGAGAGAAGTTGTCACTTGCTGCCTCTTACTCTACTAAGCAAACCCACTTCTCTAAACACTTGAAAACCCTACTGATTTGTGAGCCCATTGTGTTTGTTTCTGGGAAAAAGAGGGATTTTCTCGAGACCCAGTGAGGTTTTGAGGATTTAGCTTCTTGGGTTTTGTTCTGGGTTGTGTTTTCTTTGGCGGGTTTGATTGAAGAAACAGAGGAGAAAGTGAAGTTGAAGCAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAAAATGGATGCTTATGAAGCAACTACTTTGGTTTATGCCAAGATCAAGAACTTGGAGCCTGAGAATGCTTCGAAAATCATGGGGTTTCTTCTCATTCAAGACCTTGGTGATAAGGAGTTGATACGCTTGGCTTTTGGGCCTGAAACCCTTTTGCATTCACTGATTTTGAAGGCCAAAGCTCATTTAGGGTTTTCTTTGAACTCTTCTTCTTCAACTCCTTCTTCGCCTTCGCCTCTTAATCCCATCGCTAGACCCTCTAACAGTAACCCTTTCTCTCAATCTTCGCCTAGAATCCCTAATAATGGCTTTGACTTGACTAAAAACCCTTCTTCTCCTTCGTCAACGAGTTCATGGTCGCTTTCAGGCATCACTAACAATGTCATTAGCCCCAAATCTAGTCCCCTTCTCTCTTACGACAGTATTCGAGCTGCCCCTTTTTCAATGCCTCCATATATGCAGCACAAAAATGGGTTTGTCGATTCTGAAGTCATTGAGGAGCCTCAAGTTAACGATTACCTTTCGTTTCTCAACGAGTCATCTTCTTCGAGAGGTGAGGATTTGGTGGATCCGAGGATGGAATTAGGGCGTGGTTTGCAGAATTGGACTCAGTCTATGGACAATGCTGAGACCCCTTTTCATAGAAGAAGCTATTCTGCTAGTGATGTTTGTTTTGGCTCTGAAGATGGAGGATTTGGAGTTGGGTATAAGCCTTGTCTTTACTTTGCTAGAGGTTTTTGTAAAAATGGTAGCAATTGCAAGTTCTTGCATGGCGATTTTTCTGATTCAGTTGATCCTTCTGCTGCCATTGTTGGTTCTCCTAGCAAACTAGAGGGCTTGTTCGAGCAGCGTGAGGAGTTGATGAGATATAAGGCTGCTCAGCAGCAGAGGTTGGCCACTGCATCTGAGTTGATGGCTGGAGTGTCACCTTCACAGTATAACAAGTATATCAACTTTCTTCTGCAACAACAGAATGAAACTCATAGAGCTACAGCAGCAGCCCTTATGATGGGAGATGAGTATCACAAGTTTGGCATGTCCAGAAGTGAAAGGAATGATTTTTTGGCTTTGGCTGCTGAGAAGCGAAACTCGGCGTCGAGACAGATTTATTTAACATTCCCAGCTGATAGCACCTTCAAGGATGAAGATGTTTCAGAGTATTTCAGCAAATTTGGGCCTGTGCAAGATGTTAGGATTCCATACCAACAGAAGAGGATGTTTGGATTTGTTACATTTGTCTATCCAGAAACCGTTAAACATATATTGGCAAAGGGAAATCCACATTTCATATGTGAATCACGAGTACTTGTGAAACCCTACAAGGAGAAGGGAAAAGTTCCAGAAAAGAGGCAGCAGCATCAACAACAGCAACTAGAGAGGGGCGACTTTTCTCCTTGTTTGAGCCCCTCTGGACTGGATGCTCGGGATCCTTATGACCTAAACCTTGGAGCAAGAATGATGTATAATACTCAAGGGATGATGTTGCGTAGGAAACTAGAAGAGCAAGTTGAATTGCAGCAAGCCCTTGAACTTCAGGGAAGAAGACTATTGAATCTCCAGCTTCCCGACTTGAAGAACGATCAGCTACACCACCATCACCCACATAATTTACCTATTTGTGCTCCATTGTCCACTGAATCGCATAATCAAATGAACCAGAATATTTATCCTCCTGATTTTATTAATCAAGAACCTTCTGAAGGTCATGAGAATAACCAAGTAACTACCAACAATGCCATAAGCACACAGCAAAATTTCCAGCTGGAAGAGAATCCTTGTTTTATCCAAAGCAACAGCAGTGGGAAAGCCACAGAGGACGGTTACAACTCTGAACTGCTTGAAATCCACAAAAGTGTTGAGCAGGTCCTTCCTGATAGCCCATTTGCTTCTCCTAAAAAATCTGCCTTGGGTCAACATTCTGATTTTTCTTCTGTTAAAGCGGATGGGTGCGGTCCCAATACGTTACCGTCATCTTCTCAGAGCAACTCGTCACTGCCTACTGGTCCTGCTGGTGACATAGCTTCCCCTTAATAACTTTTTACCCCACAGCTGAATGGCAAGGTCCTGTTATTCTCTTCCTTGTGGTAGCAAACTTTCCGTCGTGCTAATTTAAGAAGTCAGTATAATTCAAAGTAAGATACATTACTTTCCTTAGGTTTCTATTCCTTGTGTGAATCTTTTGAAATATAGGCAATAACTACATGAGCATGGCCAGCAAATATCAACAATGTTAGGAAAAATTAGAGAAGCATATAGCAGGCAGAAGAATTATCCCCGGATGTATAGCGAAATTATACCTACTTTGAAGAGTAGATCTATTACTATATAGAGAGGATCTCCACAAGTATCATCTTCATCAATACATACTCCTAACAGAAAATACATATAAATTCATACATTTAGGACAGATGATTTGGTTTATGAGAGTTAGGGTCTTCTGTGTTTATTTTGTGCCCTATTTGGGTGTGTGCTGGACCATGCTGACTAAAGAACTACGGTCGGATTAACTCCGTTTTACATTGTTCATCTACACATAAGTTCTTCTGTTTGTTCTTGGCATTCATAGTTAGGTAGAGTTTGAAGTTTCTGTGAAGCTCACAAGAGCCTCTTGTGTACATAGTAGTAGGGTCCTAAGTAGACAGAAGAAGACTTGAAAAAATTTGTTGTAGCTCACTGATGAAATATCACAAAACTCATTGGGACCAAAGAAAGTTGGGGTTGGTTACCCAAAGAGCTGGGTTTACTTTTCCCTTTTTTTATTTTTTCTCCCTTTTCTTTTCCTCCTCTAGATATATAATAATTTGATGATAGTATTCCTTTTCTTTGATGTGTTGAATTGAAATTGAGTGGATGAGCAGACAGGGTTTTGCAAATTGACAAAACAAGGACAAAATTGGATTTTGATTTGGTTTGTGAAAGTTTTAACTTTAGAGGACTGTTTTGTCTCACACTGTTCCTGTTTAGGCCCACACATGGGGGAAGGACCAAGGGTATCACATGGGGCACTGACATGGTATAAATGGCATCAACCCAACACCTCCCCCTCCCTTTTCTCTGTAGATTATTGTAAATTATTTTTTTATATATATGTTTTTGTTATTGTTTGTGATGTGCATTGTTTTGTGTGCATTGGAGGGAGTGAGGGGGGAGGCCCCAACTTTTGTACTGGCATGAATTTAAATTATATGGTAGCTTTTTTTACAGTTTTTGCTGGTTTGTTCTGGCTTCCATCAGAAGTGGTTGTGGTTGAATATGGTGCACACATGTGAACTGAACTTAGCTGTTCT

Coding sequence (CDS)

ATGGATGCTTATGAAGCAACTACTTTGGTTTATGCCAAGATCAAGAACTTGGAGCCTGAGAATGCTTCGAAAATCATGGGGTTTCTTCTCATTCAAGACCTTGGTGATAAGGAGTTGATACGCTTGGCTTTTGGGCCTGAAACCCTTTTGCATTCACTGATTTTGAAGGCCAAAGCTCATTTAGGGTTTTCTTTGAACTCTTCTTCTTCAACTCCTTCTTCGCCTTCGCCTCTTAATCCCATCGCTAGACCCTCTAACAGTAACCCTTTCTCTCAATCTTCGCCTAGAATCCCTAATAATGGCTTTGACTTGACTAAAAACCCTTCTTCTCCTTCGTCAACGAGTTCATGGTCGCTTTCAGGCATCACTAACAATGTCATTAGCCCCAAATCTAGTCCCCTTCTCTCTTACGACAGTATTCGAGCTGCCCCTTTTTCAATGCCTCCATATATGCAGCACAAAAATGGGTTTGTCGATTCTGAAGTCATTGAGGAGCCTCAAGTTAACGATTACCTTTCGTTTCTCAACGAGTCATCTTCTTCGAGAGGTGAGGATTTGGTGGATCCGAGGATGGAATTAGGGCGTGGTTTGCAGAATTGGACTCAGTCTATGGACAATGCTGAGACCCCTTTTCATAGAAGAAGCTATTCTGCTAGTGATGTTTGTTTTGGCTCTGAAGATGGAGGATTTGGAGTTGGGTATAAGCCTTGTCTTTACTTTGCTAGAGGTTTTTGTAAAAATGGTAGCAATTGCAAGTTCTTGCATGGCGATTTTTCTGATTCAGTTGATCCTTCTGCTGCCATTGTTGGTTCTCCTAGCAAACTAGAGGGCTTGTTCGAGCAGCGTGAGGAGTTGATGAGATATAAGGCTGCTCAGCAGCAGAGGTTGGCCACTGCATCTGAGTTGATGGCTGGAGTGTCACCTTCACAGTATAACAAGTATATCAACTTTCTTCTGCAACAACAGAATGAAACTCATAGAGCTACAGCAGCAGCCCTTATGATGGGAGATGAGTATCACAAGTTTGGCATGTCCAGAAGTGAAAGGAATGATTTTTTGGCTTTGGCTGCTGAGAAGCGAAACTCGGCGTCGAGACAGATTTATTTAACATTCCCAGCTGATAGCACCTTCAAGGATGAAGATGTTTCAGAGTATTTCAGCAAATTTGGGCCTGTGCAAGATGTTAGGATTCCATACCAACAGAAGAGGATGTTTGGATTTGTTACATTTGTCTATCCAGAAACCGTTAAACATATATTGGCAAAGGGAAATCCACATTTCATATGTGAATCACGAGTACTTGTGAAACCCTACAAGGAGAAGGGAAAAGTTCCAGAAAAGAGGCAGCAGCATCAACAACAGCAACTAGAGAGGGGCGACTTTTCTCCTTGTTTGAGCCCCTCTGGACTGGATGCTCGGGATCCTTATGACCTAAACCTTGGAGCAAGAATGATGTATAATACTCAAGGGATGATGTTGCGTAGGAAACTAGAAGAGCAAGTTGAATTGCAGCAAGCCCTTGAACTTCAGGGAAGAAGACTATTGAATCTCCAGCTTCCCGACTTGAAGAACGATCAGCTACACCACCATCACCCACATAATTTACCTATTTGTGCTCCATTGTCCACTGAATCGCATAATCAAATGAACCAGAATATTTATCCTCCTGATTTTATTAATCAAGAACCTTCTGAAGGTCATGAGAATAACCAAGTAACTACCAACAATGCCATAAGCACACAGCAAAATTTCCAGCTGGAAGAGAATCCTTGTTTTATCCAAAGCAACAGCAGTGGGAAAGCCACAGAGGACGGTTACAACTCTGAACTGCTTGAAATCCACAAAAGTGTTGAGCAGGTCCTTCCTGATAGCCCATTTGCTTCTCCTAAAAAATCTGCCTTGGGTCAACATTCTGATTTTTCTTCTGTTAAAGCGGATGGGTGCGGTCCCAATACGTTACCGTCATCTTCTCAGAGCAACTCGTCACTGCCTACTGGTCCTGCTGGTGACATAGCTTCCCCTTAA

Protein sequence

MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAHLGFSLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSSTSSWSLSGITNNVISPKSSPLLSYDSIRAAPFSMPPYMQHKNGFVDSEVIEEPQVNDYLSFLNESSSSRGEDLVDPRMELGRGLQNWTQSMDNAETPFHRRSYSASDVCFGSEDGGFGVGYKPCLYFARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQREELMRYKAAQQQRLATASELMAGVSPSQYNKYINFLLQQQNETHRATAAALMMGDEYHKFGMSRSERNDFLALAAEKRNSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKHILAKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLERGDFSPCLSPSGLDARDPYDLNLGARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAPLSTESHNQMNQNIYPPDFINQEPSEGHENNQVTTNNAISTQQNFQLEENPCFIQSNSSGKATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSDFSSVKADGCGPNTLPSSSQSNSSLPTGPAGDIASP

Homology

[Close]

BLAST of Lcy03g008980 vs. ExPASy Swiss-Prot
Match: Q94CJ8 (Zinc finger CCCH domain-containing protein 55 OS=Arabidopsis thaliana OX=3702 GN=At5g12440 PE=2 SV=3)

HSP 1 Score: 456.8 bits (1174), Expect = 4.1e-127
Identity = 303/660 (45.91%), Postives = 409/660 (61.97%), Query Frame = 0


Query: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
           MD+ +AT+L+  KI++LEP+ A KI+G+LL+ D GD++L+ LA GPE++L S I K K+ 
Sbjct: 1   MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60

Query: 61  LG-FSLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGF-DLTKN-PSSPSSTSSW 120
           LG FS NS SSTP+SPSPLNPI RP  +   S  S     NGF D  +N PSSPSSTS W
Sbjct: 61  LGIFSNNSPSSTPTSPSPLNPICRPPLNGRGSSHS-----NGFMDFRRNSPSSPSSTSPW 120

Query: 121 SLSGITNN------VISPKSSPLLSYDSIRAAPFSMPPYMQHKNGFVDSEVIEEPQVNDY 180
           S +   N        ISPK +P+    S   +      +    +    ++++++ Q+ND 
Sbjct: 121 SFNNCINGNNGNNPHISPKHTPISKPFSSHQSNGLSATHSGSADAAGGADLLDDQQLNDC 180

Query: 181 LSFLNESSSSRGEDLVDPRMELGRGLQNWTQSMDNAETPFHRRSYSASDVCFGSEDGGFG 240
           LSFL++ S S+ EDLVDP + L   +        + ET  HRRS+S  D  F S D GFG
Sbjct: 181 LSFLDD-SCSKTEDLVDPSIPLDYSVDG------DGETHLHRRSFSC-DASFVSGDDGFG 240

Query: 241 VGYKPCLYFARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQREELMRYKAA 300
            G KPC+YF+RG CKNG +CKF+HG + D++D +  +  SP K+E    Q EE+MR K A
Sbjct: 241 GGCKPCVYFSRGLCKNGESCKFIHGGYPDNMDGNGIVADSPRKMENFVRQHEEMMRLKLA 300

Query: 301 -QQQRLATASELMAGVSPSQYNKYINFLLQQQNETHRATAAALMMGDE-YHKFGMSRSER 360
            QQQRL  AS+++       Y K ++FLLQQ    H      L  GDE +      R ER
Sbjct: 301 YQQQRL--ASQILGRAPQLPYEKRMDFLLQQ----HAQRDGGLPFGDERFWSSSPGRLER 360

Query: 361 NDFLALAAEKRNSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVT 420
            +      ++ NSASRQIYLTFPADSTFKDEDV+ YFS FG VQDVRIPYQQKRMFGFV+
Sbjct: 361 MELAMHLGDQSNSASRQIYLTFPADSTFKDEDVATYFSLFGTVQDVRIPYQQKRMFGFVS 420

Query: 421 FVYPETVKHILAKGNPHFICESRVLVKPYKEKGKVPEKRQQH-QQQQLERGDFSPCLSPS 480
           F +PETVK +LA+GNPHFIC+SRVLVKPYKEKGKV +K+QQ   QQQ+ERG++SPC SPS
Sbjct: 421 FAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVLDKKQQQLLQQQIERGNYSPCSSPS 480

Query: 481 GLDARDPYDLNLGARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLH 540
           G+D R+  D +LG++M+Y  + MM RRK+ EQ +L +A+EL+ RR +NLQLP+ KN    
Sbjct: 481 GIDPREQSDFHLGSKMLYERREMM-RRKI-EQADLLRAIELERRRFINLQLPEFKNSVTL 540

Query: 541 HHHPHNLPICAPLSTESHNQMNQNIYPPDFINQEPSEGHENNQVTTNNAISTQQNFQLEE 600
           +HH  +  + +P    S    NQ+   PDF  Q    G +  +VT +   + + +     
Sbjct: 541 NHH-RSFSVGSPGYFSSAG--NQS---PDF--QSELNGADALKVTDD---TLELHPYPVV 600

Query: 601 NPCFIQSNSSGKATEDGYNSELL--EIHKSVEQVLPDSPFASPKKSALGQHSDFSSVKAD 647
           NP  + ++ S  A E+   SELL  +   ++E VLP + F  P  S+   H    S + +
Sbjct: 601 NPMSVNNSYSNGAKEETNKSELLDPDSGSTIELVLPSNLF--PSASSTDDHKTDDSAETN 626

[Close]

BLAST of Lcy03g008980 vs. ExPASy Swiss-Prot
Match: Q0D3J9 (Zinc finger CCCH domain-containing protein 53 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0682400 PE=2 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 6.4e-112
Identity = 318/719 (44.23%), Postives = 409/719 (56.88%), Query Frame = 0


Query: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
           MDAYEAT +V+++I+ L+P++A+KIMGFLLIQD G+KE+IRLAFGPE LLH+++ KA+  
Sbjct: 1   MDAYEATKVVFSRIQALDPDHAAKIMGFLLIQDHGEKEMIRLAFGPEALLHTVMAKARKE 60

Query: 61  LGFSLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSSTSSWSLS 120
           LG    S   TP+S +     A  +  +PF  S       G     +P S SS SSW+  
Sbjct: 61  LGLLPASGPGTPTSVA----AAAAAAHSPFMLSRQNSGRCG--TAPSPLSVSSPSSWAPP 120

Query: 121 GI--TNNVISPKSSPL---LSYDSIRAAPFSMPPYMQHKNGFVDSEVIEEPQVNDYLSFL 180
            +   NN IS  +      L  + I  A    PP       F    +++E Q+ D L+FL
Sbjct: 121 PVFSRNNSISNGAGEEMVGLGDELISPANGGGPP----SPFFGGDPLMDELQLQDQLAFL 180

Query: 181 NESSSSRGEDLVDPRMELGR---------GLQNWTQSMDNAETPFHRRSYSASDVCFGSE 240
           NE     G  +  P  + G          GL ++     N   P HRRS S S++C G  
Sbjct: 181 NEGGVPAGHQM--PMFDGGECRSPGGGDGGLFSYNLGWANG-GPGHRRSASVSELCLGGA 240

Query: 241 DGGFGVGYKPCLYFARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQREELM 300
           D   G+G+KPCLY+ARG+CKNGS C+F+HG   D     AA    PS +E   + ++ L+
Sbjct: 241 D---GLGWKPCLYYARGYCKNGSACRFVHGGLPD----DAAGKMDPSAVEQ--QCQDFLI 300

Query: 301 RYKAAQQQRLATASELMAGV-----SPSQYNKYINFLL---QQQNETHRATAAALMM--G 360
           R K+   QRLA A+   +       SPS   K ++ LL   QQQNE+ RA AAA +M  G
Sbjct: 301 RSKS---QRLAAAAFPYSPTGSLPGSPSAATKCLSLLLQQQQQQNESQRAAAAAALMLGG 360

Query: 361 DEYHKF-GMSRSERNDFLALAAEKRNSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDV 420
           DE HKF G  R ER DF    A   N  SRQIYLTFPADSTF++EDVS YFS +GPV DV
Sbjct: 361 DEAHKFMGRPRLERADF----ASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDV 420

Query: 421 RIPYQQKRMFGFVTFVYPETVKHILAKGNPHFICESRVLVKPYKEKGKVPEK-RQQHQQQ 480
           RIPYQQKRMFGFVTFVYPETVK ILAKGNPHFIC++RVLVKPYKEKGKVP+K R+QHQ  
Sbjct: 421 RIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQHQPG 480

Query: 481 QLERGDFSPCLSPSGLDARDPYDLN-LGARMMYNTQG---MMLRRKLEEQ---VELQQAL 540
             ER DFS C +P+GLDARDP+D++ LGARM+ ++     M+LRRKLEEQ    ELQQA+
Sbjct: 481 --ERVDFSSCTTPTGLDARDPFDMHQLGARMLQHSNSANEMLLRRKLEEQQQAAELQQAI 540

Query: 541 ELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAPLSTESHNQMNQNIYPPDFINQEPSEGH 600
           EL  RRL+ LQL D K+       P   P  A  S  + N   ++  PPD        G 
Sbjct: 541 ELHSRRLMGLQLLDFKSRAAAAPTPIGNPFSA--SQTAANATGES--PPDSGELGKGSGF 600

Query: 601 ENNQVTTNNAISTQQNFQLEENPCFIQSNSSGKATEDGYNSELLEIHKSVEQVLPDSPFA 660
                   N    ++              S+G+++    +S+     +SVE  LPDSPFA
Sbjct: 601 LLAHKKAVNGADKEE--------------STGESSSPNTDSD-----QSVEHNLPDSPFA 660

Query: 661 SPKKSALGQHSDFSSVKAD-------GC-----GPNTLPSSSQSNSSLPTGPAGDIASP 675
           SP KSA      F+  +A+       GC     G N   S+  +N  LP+  A D+ SP
Sbjct: 661 SPTKSAGFARDPFAPTEAEISATASTGCSATYVGINNGASNGGTNHLLPS--ALDMPSP 663

[Close]

BLAST of Lcy03g008980 vs. ExPASy Swiss-Prot
Match: Q10M00 (Zinc finger CCCH domain-containing protein 22 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0328900 PE=2 SV=2)

HSP 1 Score: 397.5 bits (1020), Expect = 3.0e-109
Identity = 300/708 (42.37%), Postives = 398/708 (56.21%), Query Frame = 0


Query: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
           MDAYEAT +V+++I+ L+P++A+KIMG LLIQD GDKE+IRLAFGPE LLHS++ +A+  
Sbjct: 1   MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60

Query: 61  LGFSLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSSTSSWS-- 120
           L  +L      PSS SP  P A     +PF  S       G   + +P S SS SSW+  
Sbjct: 61  L--ALLPPPPPPSSSSPTVPAAH----SPFLLSRQN-SGRGPAPSPSPLSASSPSSWAQA 120

Query: 121 -----LSGITNNVISPKSSPLLSYDSIRAAPFSMPPYMQHKNGFVDSEVIEEPQVNDYLS 180
                 +G  + V+      +   +S   A  + PP+   + G V   ++++ Q+ + L+
Sbjct: 121 QPFSRSNGSVDEVVGAGEELISPANSGGGAAANAPPFFP-RGGDV---LLDDFQLQEQLA 180

Query: 181 FLNESSSS--------RGEDLVDPRMELGRGLQNWTQSMDNAETPFHRRSYSASDVCFGS 240
           FLNE   +         G +   P    G G+  +     N   P HRRS S +++C G 
Sbjct: 181 FLNEGGVNPSHPLQGFDGAECRSPGPGEGGGMFPYGLGWANG-GPGHRRSASVNELCLGG 240

Query: 241 EDGGFGVGYKPCLYFARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQ--RE 300
                G G+KPCLY+ARGFCKNGS+C+F+HG      D +AA+ G+        +Q  ++
Sbjct: 241 GSSD-GFGWKPCLYYARGFCKNGSSCRFVHG------DDAAALTGAAMDAATAEQQQCQD 300

Query: 301 ELMRYKAAQQQRLATASELMAGV-----SPSQYNKYINFLLQQQ-NETHRATAAALMM-- 360
            L+R K+   QRL  A+   +       SPS   K ++ LLQQQ N+  RA AAA +M  
Sbjct: 301 FLLRSKS---QRLGPAAFPYSPTGSLPGSPSAATKCLSLLLQQQHNDNQRAAAAAALMLG 360

Query: 361 -GDEYHKF-GMSRSERNDFLALAAEKRNSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQ 420
             DE HKF G  R +R DF    A   N  SRQIYLTFPADSTF++EDVS YFS +GPV 
Sbjct: 361 GSDEAHKFMGRPRLDRVDF----ASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVH 420

Query: 421 DVRIPYQQKRMFGFVTFVYPETVKHILAKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQ 480
           DVRIPYQQKRMFGFVTFVYPETVK ILAKGNPHFIC++RVLVKPYKEKGKVP+K ++HQ 
Sbjct: 421 DVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKHQ- 480

Query: 481 QQLERGDFSPCLSPSGLDARDPYDLN-LGARMMY---NTQGMMLRRKLEEQ---VELQQA 540
                GDFS C +P+GLD RDP+DL+ LGARM+    +T  MMLRRKLEEQ    ELQQA
Sbjct: 481 -----GDFSGCTTPTGLDGRDPFDLHQLGARMLQHSNSTNEMMLRRKLEEQQQAAELQQA 540

Query: 541 LELQGRRLLNLQLPDLKN---DQLHHHHPHNLPICAPLSTESHNQMNQNIYPPDFINQEP 600
           +EL  RRL++LQL DLKN     +       +P      +           PPD   Q  
Sbjct: 541 IELHSRRLMDLQLLDLKNRAAAAVTTAMAMTIPTANAFGSSQPLATTMVESPPDSGEQLK 600

Query: 601 SEGHENNQVTTNNAISTQQNFQLEENPCFIQSNSSGKATEDGYNSELLEIHKSVEQVLPD 660
             G+   +    N    ++              S+G+A+ +       +  +S+E  LPD
Sbjct: 601 GTGYFTEERKMVNGGGDKE-------------ESAGEASLNA------DSDQSLEHNLPD 656

Query: 661 SPFASPKKSALGQHSDFSSVKADGCGPNTLPSSSQSNSSLPTGPAGDI 672
           SPFASP KS++  H  F++    G    +  S+S    S  T   G I
Sbjct: 661 SPFASPTKSSVSAHQSFTTTDT-GVVATSSCSASHVGISAGTNAGGGI 656

[Close]

BLAST of Lcy03g008980 vs. ExPASy Swiss-Prot
Match: Q10LZ9 (Zinc finger CCCH domain-containing protein 23 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0329200 PE=2 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.6e-102
Identity = 290/715 (40.56%), Postives = 394/715 (55.10%), Query Frame = 0


Query: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
           MDAYEAT +V+++I+ L+P++A+KIMG LLIQD GDKE+IRLAFGPE LLHS++ +A+  
Sbjct: 1   MDAYEATKVVFSRIQALDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLHSVMAQARKE 60

Query: 61  LGF--SLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSSTSSWS 120
           L       ++SS+P+ P+  +P           Q+S R P             S ++S  
Sbjct: 61  LALLPPPQAASSSPTVPAAHSPFLLS------RQNSGRCPAPSPSSWAQAQPFSRSNSMG 120

Query: 121 LSGITNNVISPKSSPLLSYDSIRAAPFSMPPYMQHKNGFVDSEVIEEPQVNDYLSFLNES 180
             G  + ++      +   +    A  + PP+           ++++ ++ + L+FL++ 
Sbjct: 121 NGGAADEMVGAGEELMSPLNGGGGAAANAPPFFPRGG----DALLDDFELQEQLAFLHDG 180

Query: 181 SSS----------RGEDLVDPRMELGRGLQNWTQSMDNAETPFHRRSYSASDVCFGSEDG 240
           +             G +   P      G+  +  +  N   P HRRS S +++C     G
Sbjct: 181 AGGVNPGHALQAFDGAECRSPGPGESGGMLPYGLAWANG-GPGHRRSASVNELCL----G 240

Query: 241 GFGVGYKPCLYFARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQREELMRY 300
           G G G+KPCLY+ARGFCKNGS C+F+HG  SD     AA+  + ++ +   + ++ L+R 
Sbjct: 241 GDGFGWKPCLYYARGFCKNGSTCRFVHGGLSD----DAAMDATTAEQQ---QCQDFLLRS 300

Query: 301 KAAQQQRLATASELMA-----GVSPSQYNKYINFLLQQQ---NETHRATAAALMM--GDE 360
           K+   QRL  A+           SPS  +K ++ LLQQQ   N+  RA AAALM+  GDE
Sbjct: 301 KS---QRLGPAAFPFTPTGSLPASPSATSKCLSLLLQQQQQHNDNQRAAAAALMLAGGDE 360

Query: 361 YHKF-GMSRSERNDFLALAAEKRNSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRI 420
            HKF G  R +R DF    A   N  SRQIYLTFPADSTF++EDVS YFS +GPV DVRI
Sbjct: 361 AHKFMGRPRLDRVDF----ASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRI 420

Query: 421 PYQQKRMFGFVTFVYPETVKHILAKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLE 480
           PYQQKRMFGFVTFVYPETVK ILAKGNPHFIC++RVLVKPYKEKGKVP+K ++ QQ    
Sbjct: 421 PYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQQQ---- 480

Query: 481 RGDFSPCLSPSGLDARDPYDLN-LGARMMYNTQG---MMLRRKLEEQ---VELQQALELQ 540
            GDF  C+SP+GLDARDP+D + LGARM+ ++     +MLRRKLEEQ    ELQQA++L 
Sbjct: 481 -GDFC-CMSPTGLDARDPFDFHQLGARMLQHSNSANELMLRRKLEEQQQAAELQQAIDLH 540

Query: 541 GRRLLNLQLPDLKNDQLHHHHPHNLPICAPLSTESHNQMNQNIYPPDFINQEPSEGHENN 600
            RRL+ LQL DLK+    H         A  +T S         P    N   S      
Sbjct: 541 SRRLIGLQLLDLKSSAAVH--------AAETTTMS--------LPTPITNAFTSGQPGAT 600

Query: 601 QVTTNNAISTQQNFQLEENPCFIQ-SNSSGKATEDGYNSELLEIHKSVEQVLPDSPFASP 660
            +  +   ST Q      +P   +  N   KA   G  +   +  +S E  LPDSPFAS 
Sbjct: 601 TIVESPPSSTGQLMASCGSPSEGKVVNGGNKADSAGEVTRNADSDQSGEHNLPDSPFASS 659

Query: 661 KKS----------ALGQHSDFSSVKADGCGPNTLPSSSQSNSSLPTGPAGDIASP 675
            KS          A+G   DF++  +   G + + S   +N   P  P  DI SP
Sbjct: 661 TKSTAFFTATAATAIGSEGDFTTGSSCNIGGSAVGS---ANPLRP--PTLDIPSP 659

[Close]

BLAST of Lcy03g008980 vs. ExPASy Swiss-Prot
Match: Q9SV09 (Zinc finger CCCH domain-containing protein 46 OS=Arabidopsis thaliana OX=3702 GN=At3g51950 PE=1 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.5e-89
Identity = 273/685 (39.85%), Postives = 351/685 (51.24%), Query Frame = 0


Query: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
           MD YEAT +V ++I++L+PENASKIMG LL+QD G+KE+IRLAFGPETL+HS+I+KAK  
Sbjct: 1   MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60

Query: 61  LGFSLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSSTSSWSLS 120
           LG  +N S S                  P+S                             
Sbjct: 61  LGL-MNCSRS------------------PWSHQ--------------------------- 120

Query: 121 GITNNVISPKSSPLLSYDSIRAAPFSMPPYMQHKNGFVDSEVIEEPQVNDYLSFLNESSS 180
              + +ISPK++   S +     P S+P Y    NG   S  +     ND+   L +  +
Sbjct: 121 ---DELISPKNNRGSSLN-----PASLPFY---ANGGRSSRDL----TNDF--ELMDDMN 180

Query: 181 SRGEDLVDPRMELGRGLQNWTQSMDNAETPFHRRSYSA--SDVCFGSEDGGFGVGYKPCL 240
           SR  D +                        H RS S     + +G  D   G G  PC 
Sbjct: 181 SRSTDFLG---------------------SVHARSGSCVLDGLGYGG-DSDLGFGGVPCS 240

Query: 241 YFARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQREELMRYKAAQQQRLAT 300
           YFARGFCKNG++C+F+H       D  A +VGSPS++E L   R   +  + A      T
Sbjct: 241 YFARGFCKNGASCRFVHS------DGGADLVGSPSRIELL---RSNSVPPRLA--HHFMT 300

Query: 301 ASELMAGVSPSQYNKYINFLLQQQNETHRATAAALMMGDEYHKFGMSRSERNDFLALAAE 360
            S L     PS   K +N    QQN+  RA AAALM+GDE  K G  R ER D  A+A  
Sbjct: 301 RSSL-----PSFSTKGVNL---QQNDVQRA-AAALMIGDELQKLGRWRPERIDLSAMAC- 360

Query: 361 KRNSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKH 420
               ASRQIYLTFPADS F++EDVS YFS FGPVQDVRIPYQQKRMFGFVTFVYPETVK 
Sbjct: 361 ---PASRQIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVKS 420

Query: 421 ILAKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLERGDFSPCLSPSGLDARDPYDL 480
           ILAKGNPHF+C+SRVLVKPYKEKGKVP+K + +Q  + E       LSP+GLD+  P D+
Sbjct: 421 ILAKGNPHFVCDSRVLVKPYKEKGKVPDKYRTNQTTERE-------LSPTGLDS-SPRDV 480

Query: 481 NLGARMMY-NTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPI 540
            LG R  Y NTQ ++ R K EE++     LELQ RRL+NLQL D+K          +  +
Sbjct: 481 -LGGRGFYNNTQDVLWRSKFEEEI-----LELQSRRLMNLQLLDVKK---------HFQL 524

Query: 541 CAPLSTESHNQMNQNIYPP---DFINQEPSEGHENNQVTTNNAISTQQNFQLEENPCFIQ 600
            +P +  S N  +Q++  P     I +E   G +                          
Sbjct: 541 NSPTNIHSPNPFSQSLISPRPLSVIKREYDGGEKGK------------------------ 524

Query: 601 SNSSGKATEDGYNSELLEIHKSVEQVLPDSPFASP-------KKSALGQHSDF---SSVK 660
                 ++++G + + + + + +E  LPDSPFASP         SA    SD    SS  
Sbjct: 601 -----GSSKEGSDDDTMNLPERLEDSLPDSPFASPAHHLLLFADSADNNGSDLWSPSSDN 524

Query: 661 ADGCGPNTLPSSSQS-NSSLPTGPA 669
            D   P+TL  S  S N  +P  PA
Sbjct: 661 DDNSTPSTLSDSFNSFNYQMPRLPA 524

[Close]

BLAST of Lcy03g008980 vs. ExPASy TrEMBL
Match: A0A5D3D5S8 (Zinc finger CCCH domain-containing protein 46-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G001370 PE=4 SV=1)

HSP 1 Score: 1293.5 bits (3346), Expect = 0.0e+00
Identity = 656/677 (96.90%), Postives = 665/677 (98.23%), Query Frame = 0


Query: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
           MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH
Sbjct: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60

Query: 61  LGFSLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSSTSSWSLS 120
           LGF LNSSSSTPSSPSPLNPIARP NSNPFSQSSPRIPNNGFDLTKNPSSPS+TSSWSLS
Sbjct: 61  LGFPLNSSSSTPSSPSPLNPIARPLNSNPFSQSSPRIPNNGFDLTKNPSSPSTTSSWSLS 120

Query: 121 GITNNVISPKSSPLLSYDSIRAAPFSMPPYMQHKNGFVDSEVIEEPQVNDYLSFLNESSS 180
           GITNNVISPKSSPLLSYDSIRAAPFSMPP+MQHKNGFVDSEVIEEPQVNDYLSFLNESSS
Sbjct: 121 GITNNVISPKSSPLLSYDSIRAAPFSMPPFMQHKNGFVDSEVIEEPQVNDYLSFLNESSS 180

Query: 181 SRGEDLVDPRMELGRGLQNWTQSMDNAETPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF 240
           SRGEDLVDPRMELGRGLQNWTQSMDNA+TPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF
Sbjct: 181 SRGEDLVDPRMELGRGLQNWTQSMDNADTPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF 240

Query: 241 ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQREELMRYKAAQQQRLATAS 300
           ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLF+QREE MRYKAAQQQRLATAS
Sbjct: 241 ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFDQREEFMRYKAAQQQRLATAS 300

Query: 301 ELMAGVSPSQYNKYINFLLQQQNETHRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR 360
           ELMAGVSPSQYNKYINFLLQQQNE HRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR
Sbjct: 301 ELMAGVSPSQYNKYINFLLQQQNENHRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR 360

Query: 361 NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKHIL 420
           NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVK+IL
Sbjct: 361 NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKNIL 420

Query: 421 AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLERGDFSPCLSPSGLDARDPYDLNL 480
           AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQL+RGDFSPCLSPSGLDARDPYDLNL
Sbjct: 421 AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLDRGDFSPCLSPSGLDARDPYDLNL 480

Query: 481 GARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAP 540
           GARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAP
Sbjct: 481 GARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAP 540

Query: 541 LSTESHNQMNQNIYPPDFINQEPSE---GHENNQVTTNNAISTQQNFQLEENPCFIQSNS 600
           LS ESHNQMNQNI+PPDFINQE SE   GHENNQ+ TNNAISTQQNFQLEENPCF+QSNS
Sbjct: 541 LSIESHNQMNQNIFPPDFINQEASEVISGHENNQLATNNAISTQQNFQLEENPCFVQSNS 600

Query: 601 SGKATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSDFSSVKADGCGPNTLPSSS 660
            GKATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSD SSVKADGCGPNTLPSSS
Sbjct: 601 GGKATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSDISSVKADGCGPNTLPSSS 660

Query: 661 QSNSSLPTGPAGDIASP 675
           QSNSSLPTGPAGDIASP
Sbjct: 661 QSNSSLPTGPAGDIASP 677

[Close]

BLAST of Lcy03g008980 vs. ExPASy TrEMBL
Match: A0A0A0M077 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G616250 PE=4 SV=1)

HSP 1 Score: 1284.2 bits (3322), Expect = 0.0e+00
Identity = 652/675 (96.59%), Postives = 661/675 (97.93%), Query Frame = 0


Query: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
           MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH
Sbjct: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60

Query: 61  LGFSLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSSTSSWSLS 120
           LGF LNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPS+T SWSLS
Sbjct: 61  LGFPLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSTTGSWSLS 120

Query: 121 GITNNVISPKSSPLLSYDSIRAAPFSMPPYMQHKNGFVDSEVIEEPQVNDYLSFLNESSS 180
           GITNNVISPKSSPLLSYDSIRAAPFSMPP+MQHKNGFVDSEVIEEPQVN+YLSFLNESSS
Sbjct: 121 GITNNVISPKSSPLLSYDSIRAAPFSMPPFMQHKNGFVDSEVIEEPQVNEYLSFLNESSS 180

Query: 181 SRGEDLVDPRMELGRGLQNWTQSMDNAETPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF 240
           SRGEDLVDPRMELGRGLQNWTQSMDNA+TPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF
Sbjct: 181 SRGEDLVDPRMELGRGLQNWTQSMDNADTPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF 240

Query: 241 ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQREELMRYKAAQQQRLATAS 300
           ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLF+QREE MRYKAAQQQRLATAS
Sbjct: 241 ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFDQREEFMRYKAAQQQRLATAS 300

Query: 301 ELMAGVSPSQYNKYINFLLQQQNETHRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR 360
           ELMAGVSPSQYNKYINFLLQQQNE HRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR
Sbjct: 301 ELMAGVSPSQYNKYINFLLQQQNENHRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR 360

Query: 361 NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKHIL 420
           NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVK+IL
Sbjct: 361 NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKNIL 420

Query: 421 AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLERGDFSPCLSPSGLDARDPYDLNL 480
           AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQL+RGDFSPCLSPSGLDARDPYDLNL
Sbjct: 421 AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLDRGDFSPCLSPSGLDARDPYDLNL 480

Query: 481 GARMMY-NTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICA 540
           GARMMY NTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICA
Sbjct: 481 GARMMYNNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICA 540

Query: 541 PLSTESHNQMNQNIYPPDFINQEPSEGHENNQVTTNNAISTQQNFQLEENPCFIQSNSSG 600
           PLS ESHNQMNQNI+PPDFIN E SEGHENNQ+ TNNAISTQQNFQLEEN CFIQSNS G
Sbjct: 541 PLSIESHNQMNQNIFPPDFINPEASEGHENNQLATNNAISTQQNFQLEENLCFIQSNSGG 600

Query: 601 KATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSDFSSVKADGCGPNTLPSSSQS 660
           KATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSD SSVK DGCGPNTLPSSSQS
Sbjct: 601 KATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSDISSVKGDGCGPNTLPSSSQS 660

Query: 661 NSSLPTGPAGDIASP 675
           N SLPTGPAGDIASP
Sbjct: 661 NPSLPTGPAGDIASP 675

[Close]

BLAST of Lcy03g008980 vs. ExPASy TrEMBL
Match: A0A5A7VNB1 (Zinc finger CCCH domain-containing protein 46-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G00200 PE=4 SV=1)

HSP 1 Score: 1268.8 bits (3282), Expect = 0.0e+00
Identity = 639/657 (97.26%), Postives = 648/657 (98.63%), Query Frame = 0


Query: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
           MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH
Sbjct: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60

Query: 61  LGFSLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSSTSSWSLS 120
           LGF LNSSSSTPSSPSPLNPIARP NSNPFSQSSPRIPNNGFDLTKNPSSPS+TSSWSLS
Sbjct: 61  LGFPLNSSSSTPSSPSPLNPIARPLNSNPFSQSSPRIPNNGFDLTKNPSSPSTTSSWSLS 120

Query: 121 GITNNVISPKSSPLLSYDSIRAAPFSMPPYMQHKNGFVDSEVIEEPQVNDYLSFLNESSS 180
           GITNNVISPKSSPLLSYDSIRAAPFSMPP+MQHKNGFVDSEVIEEPQVNDYLSFLNESSS
Sbjct: 121 GITNNVISPKSSPLLSYDSIRAAPFSMPPFMQHKNGFVDSEVIEEPQVNDYLSFLNESSS 180

Query: 181 SRGEDLVDPRMELGRGLQNWTQSMDNAETPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF 240
           SRGEDLVDPRMELGRGLQNWTQSMDNA+TPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF
Sbjct: 181 SRGEDLVDPRMELGRGLQNWTQSMDNADTPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF 240

Query: 241 ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQREELMRYKAAQQQRLATAS 300
           ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLF+QREE MRYKAAQQQRLATAS
Sbjct: 241 ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFDQREEFMRYKAAQQQRLATAS 300

Query: 301 ELMAGVSPSQYNKYINFLLQQQNETHRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR 360
           ELMAGVSPSQYNKYINFLLQQQNE HRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR
Sbjct: 301 ELMAGVSPSQYNKYINFLLQQQNENHRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR 360

Query: 361 NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKHIL 420
           NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVK+IL
Sbjct: 361 NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKNIL 420

Query: 421 AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLERGDFSPCLSPSGLDARDPYDLNL 480
           AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQL+RGDFSPCLSPSGLDARDPYDLNL
Sbjct: 421 AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLDRGDFSPCLSPSGLDARDPYDLNL 480

Query: 481 GARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAP 540
           GARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAP
Sbjct: 481 GARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAP 540

Query: 541 LSTESHNQMNQNIYPPDFINQEPSEGHENNQVTTNNAISTQQNFQLEENPCFIQSNSSGK 600
           LS ESHNQMNQNI+PPDFINQE SEGHENNQ+ TNNAISTQQNFQLEENPCF+QSNS GK
Sbjct: 541 LSIESHNQMNQNIFPPDFINQEASEGHENNQLATNNAISTQQNFQLEENPCFVQSNSGGK 600

Query: 601 ATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSDFSSVKADGCGPNTLPSSS 658
           ATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSD SSVKADGCGPNTLPSSS
Sbjct: 601 ATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSDISSVKADGCGPNTLPSSS 657

[Close]

BLAST of Lcy03g008980 vs. ExPASy TrEMBL
Match: A0A1S4DYU9 (zinc finger CCCH domain-containing protein 46-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492010 PE=4 SV=1)

HSP 1 Score: 1266.5 bits (3276), Expect = 0.0e+00
Identity = 638/657 (97.11%), Postives = 647/657 (98.48%), Query Frame = 0


Query: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
           MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH
Sbjct: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60

Query: 61  LGFSLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSSTSSWSLS 120
           LGF LNSSSSTPSSPSPLNPIARP NSNPFSQSSPRIPNNGFDLTKNPSSPS+TSSWSLS
Sbjct: 61  LGFPLNSSSSTPSSPSPLNPIARPLNSNPFSQSSPRIPNNGFDLTKNPSSPSTTSSWSLS 120

Query: 121 GITNNVISPKSSPLLSYDSIRAAPFSMPPYMQHKNGFVDSEVIEEPQVNDYLSFLNESSS 180
           GITNNVISPKSSPLLSYDSIRAAPFSMPP+MQHKNGFVDSEVIEEPQVNDYLSFLNESSS
Sbjct: 121 GITNNVISPKSSPLLSYDSIRAAPFSMPPFMQHKNGFVDSEVIEEPQVNDYLSFLNESSS 180

Query: 181 SRGEDLVDPRMELGRGLQNWTQSMDNAETPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF 240
           SRGEDLVDPR ELGRGLQNWTQSMDNA+TPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF
Sbjct: 181 SRGEDLVDPRTELGRGLQNWTQSMDNADTPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF 240

Query: 241 ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQREELMRYKAAQQQRLATAS 300
           ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLF+QREE MRYKAAQQQRLATAS
Sbjct: 241 ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFDQREEFMRYKAAQQQRLATAS 300

Query: 301 ELMAGVSPSQYNKYINFLLQQQNETHRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR 360
           ELMAGVSPSQYNKYINFLLQQQNE HRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR
Sbjct: 301 ELMAGVSPSQYNKYINFLLQQQNENHRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR 360

Query: 361 NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKHIL 420
           NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVK+IL
Sbjct: 361 NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKNIL 420

Query: 421 AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLERGDFSPCLSPSGLDARDPYDLNL 480
           AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQL+RGDFSPCLSPSGLDARDPYDLNL
Sbjct: 421 AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLDRGDFSPCLSPSGLDARDPYDLNL 480

Query: 481 GARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAP 540
           GARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAP
Sbjct: 481 GARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAP 540

Query: 541 LSTESHNQMNQNIYPPDFINQEPSEGHENNQVTTNNAISTQQNFQLEENPCFIQSNSSGK 600
           LS ESHNQMNQNI+PPDFINQE SEGHENNQ+ TNNAISTQQNFQLEENPCF+QSNS GK
Sbjct: 541 LSIESHNQMNQNIFPPDFINQEASEGHENNQLATNNAISTQQNFQLEENPCFVQSNSGGK 600

Query: 601 ATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSDFSSVKADGCGPNTLPSSS 658
           ATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSD SSVKADGCGPNTLPSSS
Sbjct: 601 ATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSDISSVKADGCGPNTLPSSS 657

[Close]

BLAST of Lcy03g008980 vs. ExPASy TrEMBL
Match: A0A6J1DLR7 (zinc finger CCCH domain-containing protein 55-like OS=Momordica charantia OX=3673 GN=LOC111021619 PE=4 SV=1)

HSP 1 Score: 1258.8 bits (3256), Expect = 0.0e+00
Identity = 640/677 (94.53%), Postives = 661/677 (97.64%), Query Frame = 0


Query: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
           MD YEATTLVYAKIKNLEPENASKIMGFLLIQDLG+K+LIRLAFGPETLLHSLILKAKAH
Sbjct: 1   MDTYEATTLVYAKIKNLEPENASKIMGFLLIQDLGEKDLIRLAFGPETLLHSLILKAKAH 60

Query: 61  LGFSLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSSTSSWSLS 120
           LGFSLNSSSSTPSSPSPLNPIARP++SNPFSQSSPRIPNNGFDL+KNPSSPSSTSSWSLS
Sbjct: 61  LGFSLNSSSSTPSSPSPLNPIARPTSSNPFSQSSPRIPNNGFDLSKNPSSPSSTSSWSLS 120

Query: 121 GITNNVISPKSSPLLSYDSIRAAPFSMPPYMQHKNGFVDSE-VIEEPQVNDYLSFLNESS 180
           GI NN ISPKSSPLLSYDSIRAAPFS+PP++QHKNG+VDSE VIEEPQVN+YLSFLNESS
Sbjct: 121 GIANNAISPKSSPLLSYDSIRAAPFSVPPFLQHKNGYVDSEVVIEEPQVNEYLSFLNESS 180

Query: 181 SSRGEDLVDPRMELGRGLQNWTQSMDNAETPFHRRSYSASDVCFGSEDGGFGVGYKPCLY 240
           SSR EDLVDPRMELGRGLQNWTQSMDNA+TPFHRRSYSASDVCFGSEDGGFGVGYKPCLY
Sbjct: 181 SSRNEDLVDPRMELGRGLQNWTQSMDNADTPFHRRSYSASDVCFGSEDGGFGVGYKPCLY 240

Query: 241 FARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQREELMRYKAAQQQRLATA 300
           FARGFCKNGSNCKFLHGDFSDSVD SAA+VGSPSKLEGLFEQREELMRYKAAQQQRLA A
Sbjct: 241 FARGFCKNGSNCKFLHGDFSDSVDGSAAVVGSPSKLEGLFEQREELMRYKAAQQQRLAAA 300

Query: 301 SELMAGVSPSQYNKYINFLLQQQNETHRATAAALMMGDEYHKFGMSRSERNDFLALAAEK 360
           SE MAGVSPSQYNKY+NFLLQQQNETHRATAAALMMG+EYHKFG+ R ERNDFLALAAEK
Sbjct: 301 SEFMAGVSPSQYNKYLNFLLQQQNETHRATAAALMMGEEYHKFGLCRGERNDFLALAAEK 360

Query: 361 RNSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKHI 420
           RNSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKHI
Sbjct: 361 RNSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKHI 420

Query: 421 LAKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLERGDFSPCLSPSGLDARDPYDLN 480
           LAKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLERGDFSPCLSPSGLDARDPYDLN
Sbjct: 421 LAKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLERGDFSPCLSPSGLDARDPYDLN 480

Query: 481 LGARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICA 540
           LGARMMYN QGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPIC+
Sbjct: 481 LGARMMYNAQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICS 540

Query: 541 PLSTESHNQMNQN-IYPPDFINQEPSEGHENNQVTTNNAISTQQNFQLEENPCFIQSNSS 600
           PLSTESHNQMNQN I PPDFINQE SEGHEN+QVTTNNAI+TQQNFQLEENPCFIQSNSS
Sbjct: 541 PLSTESHNQMNQNVIIPPDFINQEASEGHENSQVTTNNAITTQQNFQLEENPCFIQSNSS 600

Query: 601 GKATEDGYNSELLEIHKSVEQVLPDSPFASPKKS-ALGQHSDFSSVKADGCGPNTLPSSS 660
           GKATED YNSELLEIHKS+EQVLPDSPFASPKKS ALGQ+SDFSSVKADGCGPN+LPSSS
Sbjct: 601 GKATEDRYNSELLEIHKSIEQVLPDSPFASPKKSAALGQNSDFSSVKADGCGPNSLPSSS 660

Query: 661 QSNSSLPTGPAGDIASP 675
           QSNSSLPTGPAGDIASP
Sbjct: 661 QSNSSLPTGPAGDIASP 677

[Close]

BLAST of Lcy03g008980 vs. NCBI nr
Match: XP_038879075.1 (zinc finger CCCH domain-containing protein 55-like isoform X1 [Benincasa hispida])

HSP 1 Score: 1297.7 bits (3357), Expect = 0.0e+00
Identity = 658/674 (97.63%), Postives = 666/674 (98.81%), Query Frame = 0


Query: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
           MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH
Sbjct: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60

Query: 61  LGFSLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSSTSSWSLS 120
           LGF LNSSSSTPSSPSPLNPIARP NSNPFSQSSPRIPNNGFDL+KNPSSPS+TSSWSLS
Sbjct: 61  LGFPLNSSSSTPSSPSPLNPIARPLNSNPFSQSSPRIPNNGFDLSKNPSSPSTTSSWSLS 120

Query: 121 GITNNVISPKSSPLLSYDSIRAAPFSMPPYMQHKNGFVDSEVIEEPQVNDYLSFLNESSS 180
           GI+NNVISPKSSPLLSYDSIRAAPFSMPP++QHKNGFVDSEVIEEPQVNDYLSFLNESSS
Sbjct: 121 GISNNVISPKSSPLLSYDSIRAAPFSMPPFLQHKNGFVDSEVIEEPQVNDYLSFLNESSS 180

Query: 181 SRGEDLVDPRMELGRGLQNWTQSMDNAETPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF 240
           SRGEDLVDPRMELGRGLQNWTQSMDNA+TPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF
Sbjct: 181 SRGEDLVDPRMELGRGLQNWTQSMDNADTPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF 240

Query: 241 ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQREELMRYKAAQQQRLATAS 300
           ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQREELMRYKAAQQQRLATAS
Sbjct: 241 ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQREELMRYKAAQQQRLATAS 300

Query: 301 ELMAGVSPSQYNKYINFLLQQQNETHRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR 360
           ELMAGVSPSQYNKYINFLLQQQNETHRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR
Sbjct: 301 ELMAGVSPSQYNKYINFLLQQQNETHRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR 360

Query: 361 NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKHIL 420
           NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVK+IL
Sbjct: 361 NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKNIL 420

Query: 421 AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLERGDFSPCLSPSGLDARDPYDLNL 480
           AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLERGDFSPCLSPSGLD RDPYDLNL
Sbjct: 421 AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLERGDFSPCLSPSGLDPRDPYDLNL 480

Query: 481 GARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAP 540
           GARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAP
Sbjct: 481 GARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAP 540

Query: 541 LSTESHNQMNQNIYPPDFINQEPSEGHENNQVTTNNAISTQQNFQLEENPCFIQSNSSGK 600
           LSTESHNQMNQNIYPPDFINQE SEG ENNQV TN AIS QQNFQLE+NPCFIQSNSSGK
Sbjct: 541 LSTESHNQMNQNIYPPDFINQEASEGLENNQVATNTAISMQQNFQLEDNPCFIQSNSSGK 600

Query: 601 ATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSDFSSVKADGCGPNTLPSSSQSN 660
           ATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSDFSSVKADGCGPNTLPSSSQSN
Sbjct: 601 ATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSDFSSVKADGCGPNTLPSSSQSN 660

Query: 661 SSLPTGPAGDIASP 675
           SSLPTGPAGDIASP
Sbjct: 661 SSLPTGPAGDIASP 674

[Close]

BLAST of Lcy03g008980 vs. NCBI nr
Match: TYK18918.1 (zinc finger CCCH domain-containing protein 46-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1293.5 bits (3346), Expect = 0.0e+00
Identity = 656/677 (96.90%), Postives = 665/677 (98.23%), Query Frame = 0


Query: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
           MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH
Sbjct: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60

Query: 61  LGFSLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSSTSSWSLS 120
           LGF LNSSSSTPSSPSPLNPIARP NSNPFSQSSPRIPNNGFDLTKNPSSPS+TSSWSLS
Sbjct: 61  LGFPLNSSSSTPSSPSPLNPIARPLNSNPFSQSSPRIPNNGFDLTKNPSSPSTTSSWSLS 120

Query: 121 GITNNVISPKSSPLLSYDSIRAAPFSMPPYMQHKNGFVDSEVIEEPQVNDYLSFLNESSS 180
           GITNNVISPKSSPLLSYDSIRAAPFSMPP+MQHKNGFVDSEVIEEPQVNDYLSFLNESSS
Sbjct: 121 GITNNVISPKSSPLLSYDSIRAAPFSMPPFMQHKNGFVDSEVIEEPQVNDYLSFLNESSS 180

Query: 181 SRGEDLVDPRMELGRGLQNWTQSMDNAETPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF 240
           SRGEDLVDPRMELGRGLQNWTQSMDNA+TPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF
Sbjct: 181 SRGEDLVDPRMELGRGLQNWTQSMDNADTPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF 240

Query: 241 ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQREELMRYKAAQQQRLATAS 300
           ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLF+QREE MRYKAAQQQRLATAS
Sbjct: 241 ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFDQREEFMRYKAAQQQRLATAS 300

Query: 301 ELMAGVSPSQYNKYINFLLQQQNETHRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR 360
           ELMAGVSPSQYNKYINFLLQQQNE HRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR
Sbjct: 301 ELMAGVSPSQYNKYINFLLQQQNENHRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR 360

Query: 361 NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKHIL 420
           NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVK+IL
Sbjct: 361 NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKNIL 420

Query: 421 AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLERGDFSPCLSPSGLDARDPYDLNL 480
           AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQL+RGDFSPCLSPSGLDARDPYDLNL
Sbjct: 421 AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLDRGDFSPCLSPSGLDARDPYDLNL 480

Query: 481 GARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAP 540
           GARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAP
Sbjct: 481 GARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAP 540

Query: 541 LSTESHNQMNQNIYPPDFINQEPSE---GHENNQVTTNNAISTQQNFQLEENPCFIQSNS 600
           LS ESHNQMNQNI+PPDFINQE SE   GHENNQ+ TNNAISTQQNFQLEENPCF+QSNS
Sbjct: 541 LSIESHNQMNQNIFPPDFINQEASEVISGHENNQLATNNAISTQQNFQLEENPCFVQSNS 600

Query: 601 SGKATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSDFSSVKADGCGPNTLPSSS 660
            GKATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSD SSVKADGCGPNTLPSSS
Sbjct: 601 GGKATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSDISSVKADGCGPNTLPSSS 660

Query: 661 QSNSSLPTGPAGDIASP 675
           QSNSSLPTGPAGDIASP
Sbjct: 661 QSNSSLPTGPAGDIASP 677

[Close]

BLAST of Lcy03g008980 vs. NCBI nr
Match: XP_031740548.1 (zinc finger CCCH domain-containing protein 46 isoform X1 [Cucumis sativus] >XP_031740549.1 zinc finger CCCH domain-containing protein 46 isoform X1 [Cucumis sativus] >KGN66507.1 hypothetical protein Csa_007103 [Cucumis sativus])

HSP 1 Score: 1284.2 bits (3322), Expect = 0.0e+00
Identity = 652/675 (96.59%), Postives = 661/675 (97.93%), Query Frame = 0


Query: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
           MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH
Sbjct: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60

Query: 61  LGFSLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSSTSSWSLS 120
           LGF LNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPS+T SWSLS
Sbjct: 61  LGFPLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSTTGSWSLS 120

Query: 121 GITNNVISPKSSPLLSYDSIRAAPFSMPPYMQHKNGFVDSEVIEEPQVNDYLSFLNESSS 180
           GITNNVISPKSSPLLSYDSIRAAPFSMPP+MQHKNGFVDSEVIEEPQVN+YLSFLNESSS
Sbjct: 121 GITNNVISPKSSPLLSYDSIRAAPFSMPPFMQHKNGFVDSEVIEEPQVNEYLSFLNESSS 180

Query: 181 SRGEDLVDPRMELGRGLQNWTQSMDNAETPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF 240
           SRGEDLVDPRMELGRGLQNWTQSMDNA+TPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF
Sbjct: 181 SRGEDLVDPRMELGRGLQNWTQSMDNADTPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF 240

Query: 241 ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQREELMRYKAAQQQRLATAS 300
           ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLF+QREE MRYKAAQQQRLATAS
Sbjct: 241 ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFDQREEFMRYKAAQQQRLATAS 300

Query: 301 ELMAGVSPSQYNKYINFLLQQQNETHRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR 360
           ELMAGVSPSQYNKYINFLLQQQNE HRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR
Sbjct: 301 ELMAGVSPSQYNKYINFLLQQQNENHRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR 360

Query: 361 NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKHIL 420
           NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVK+IL
Sbjct: 361 NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKNIL 420

Query: 421 AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLERGDFSPCLSPSGLDARDPYDLNL 480
           AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQL+RGDFSPCLSPSGLDARDPYDLNL
Sbjct: 421 AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLDRGDFSPCLSPSGLDARDPYDLNL 480

Query: 481 GARMMY-NTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICA 540
           GARMMY NTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICA
Sbjct: 481 GARMMYNNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICA 540

Query: 541 PLSTESHNQMNQNIYPPDFINQEPSEGHENNQVTTNNAISTQQNFQLEENPCFIQSNSSG 600
           PLS ESHNQMNQNI+PPDFIN E SEGHENNQ+ TNNAISTQQNFQLEEN CFIQSNS G
Sbjct: 541 PLSIESHNQMNQNIFPPDFINPEASEGHENNQLATNNAISTQQNFQLEENLCFIQSNSGG 600

Query: 601 KATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSDFSSVKADGCGPNTLPSSSQS 660
           KATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSD SSVK DGCGPNTLPSSSQS
Sbjct: 601 KATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSDISSVKGDGCGPNTLPSSSQS 660

Query: 661 NSSLPTGPAGDIASP 675
           N SLPTGPAGDIASP
Sbjct: 661 NPSLPTGPAGDIASP 675

[Close]

BLAST of Lcy03g008980 vs. NCBI nr
Match: KAA0067215.1 (zinc finger CCCH domain-containing protein 46-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 1268.8 bits (3282), Expect = 0.0e+00
Identity = 639/657 (97.26%), Postives = 648/657 (98.63%), Query Frame = 0


Query: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
           MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH
Sbjct: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60

Query: 61  LGFSLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSSTSSWSLS 120
           LGF LNSSSSTPSSPSPLNPIARP NSNPFSQSSPRIPNNGFDLTKNPSSPS+TSSWSLS
Sbjct: 61  LGFPLNSSSSTPSSPSPLNPIARPLNSNPFSQSSPRIPNNGFDLTKNPSSPSTTSSWSLS 120

Query: 121 GITNNVISPKSSPLLSYDSIRAAPFSMPPYMQHKNGFVDSEVIEEPQVNDYLSFLNESSS 180
           GITNNVISPKSSPLLSYDSIRAAPFSMPP+MQHKNGFVDSEVIEEPQVNDYLSFLNESSS
Sbjct: 121 GITNNVISPKSSPLLSYDSIRAAPFSMPPFMQHKNGFVDSEVIEEPQVNDYLSFLNESSS 180

Query: 181 SRGEDLVDPRMELGRGLQNWTQSMDNAETPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF 240
           SRGEDLVDPRMELGRGLQNWTQSMDNA+TPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF
Sbjct: 181 SRGEDLVDPRMELGRGLQNWTQSMDNADTPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF 240

Query: 241 ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQREELMRYKAAQQQRLATAS 300
           ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLF+QREE MRYKAAQQQRLATAS
Sbjct: 241 ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFDQREEFMRYKAAQQQRLATAS 300

Query: 301 ELMAGVSPSQYNKYINFLLQQQNETHRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR 360
           ELMAGVSPSQYNKYINFLLQQQNE HRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR
Sbjct: 301 ELMAGVSPSQYNKYINFLLQQQNENHRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR 360

Query: 361 NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKHIL 420
           NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVK+IL
Sbjct: 361 NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKNIL 420

Query: 421 AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLERGDFSPCLSPSGLDARDPYDLNL 480
           AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQL+RGDFSPCLSPSGLDARDPYDLNL
Sbjct: 421 AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLDRGDFSPCLSPSGLDARDPYDLNL 480

Query: 481 GARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAP 540
           GARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAP
Sbjct: 481 GARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAP 540

Query: 541 LSTESHNQMNQNIYPPDFINQEPSEGHENNQVTTNNAISTQQNFQLEENPCFIQSNSSGK 600
           LS ESHNQMNQNI+PPDFINQE SEGHENNQ+ TNNAISTQQNFQLEENPCF+QSNS GK
Sbjct: 541 LSIESHNQMNQNIFPPDFINQEASEGHENNQLATNNAISTQQNFQLEENPCFVQSNSGGK 600

Query: 601 ATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSDFSSVKADGCGPNTLPSSS 658
           ATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSD SSVKADGCGPNTLPSSS
Sbjct: 601 ATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSDISSVKADGCGPNTLPSSS 657

[Close]

BLAST of Lcy03g008980 vs. NCBI nr
Match: XP_016900900.1 (PREDICTED: zinc finger CCCH domain-containing protein 46-like isoform X1 [Cucumis melo])

HSP 1 Score: 1266.5 bits (3276), Expect = 0.0e+00
Identity = 638/657 (97.11%), Postives = 647/657 (98.48%), Query Frame = 0


Query: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
           MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH
Sbjct: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60

Query: 61  LGFSLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSSTSSWSLS 120
           LGF LNSSSSTPSSPSPLNPIARP NSNPFSQSSPRIPNNGFDLTKNPSSPS+TSSWSLS
Sbjct: 61  LGFPLNSSSSTPSSPSPLNPIARPLNSNPFSQSSPRIPNNGFDLTKNPSSPSTTSSWSLS 120

Query: 121 GITNNVISPKSSPLLSYDSIRAAPFSMPPYMQHKNGFVDSEVIEEPQVNDYLSFLNESSS 180
           GITNNVISPKSSPLLSYDSIRAAPFSMPP+MQHKNGFVDSEVIEEPQVNDYLSFLNESSS
Sbjct: 121 GITNNVISPKSSPLLSYDSIRAAPFSMPPFMQHKNGFVDSEVIEEPQVNDYLSFLNESSS 180

Query: 181 SRGEDLVDPRMELGRGLQNWTQSMDNAETPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF 240
           SRGEDLVDPR ELGRGLQNWTQSMDNA+TPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF
Sbjct: 181 SRGEDLVDPRTELGRGLQNWTQSMDNADTPFHRRSYSASDVCFGSEDGGFGVGYKPCLYF 240

Query: 241 ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQREELMRYKAAQQQRLATAS 300
           ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLF+QREE MRYKAAQQQRLATAS
Sbjct: 241 ARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFDQREEFMRYKAAQQQRLATAS 300

Query: 301 ELMAGVSPSQYNKYINFLLQQQNETHRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR 360
           ELMAGVSPSQYNKYINFLLQQQNE HRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR
Sbjct: 301 ELMAGVSPSQYNKYINFLLQQQNENHRATAAALMMGDEYHKFGMSRSERNDFLALAAEKR 360

Query: 361 NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKHIL 420
           NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVK+IL
Sbjct: 361 NSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKNIL 420

Query: 421 AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLERGDFSPCLSPSGLDARDPYDLNL 480
           AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQL+RGDFSPCLSPSGLDARDPYDLNL
Sbjct: 421 AKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLDRGDFSPCLSPSGLDARDPYDLNL 480

Query: 481 GARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAP 540
           GARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAP
Sbjct: 481 GARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPICAP 540

Query: 541 LSTESHNQMNQNIYPPDFINQEPSEGHENNQVTTNNAISTQQNFQLEENPCFIQSNSSGK 600
           LS ESHNQMNQNI+PPDFINQE SEGHENNQ+ TNNAISTQQNFQLEENPCF+QSNS GK
Sbjct: 541 LSIESHNQMNQNIFPPDFINQEASEGHENNQLATNNAISTQQNFQLEENPCFVQSNSGGK 600

Query: 601 ATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSDFSSVKADGCGPNTLPSSS 658
           ATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSD SSVKADGCGPNTLPSSS
Sbjct: 601 ATEDGYNSELLEIHKSVEQVLPDSPFASPKKSALGQHSDISSVKADGCGPNTLPSSS 657

[Close]

BLAST of Lcy03g008980 vs. TAIR 10
Match: AT5G12440.1 (CCCH-type zinc fingerfamily protein with RNA-binding domain )

HSP 1 Score: 456.8 bits (1174), Expect = 2.9e-128
Identity = 303/660 (45.91%), Postives = 409/660 (61.97%), Query Frame = 0


Query: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
           MD+ +AT+L+  KI++LEP+ A KI+G+LL+ D GD++L+ LA GPE++L S I K K+ 
Sbjct: 1   MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60

Query: 61  LG-FSLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGF-DLTKN-PSSPSSTSSW 120
           LG FS NS SSTP+SPSPLNPI RP  +   S  S     NGF D  +N PSSPSSTS W
Sbjct: 61  LGIFSNNSPSSTPTSPSPLNPICRPPLNGRGSSHS-----NGFMDFRRNSPSSPSSTSPW 120

Query: 121 SLSGITNN------VISPKSSPLLSYDSIRAAPFSMPPYMQHKNGFVDSEVIEEPQVNDY 180
           S +   N        ISPK +P+    S   +      +    +    ++++++ Q+ND 
Sbjct: 121 SFNNCINGNNGNNPHISPKHTPISKPFSSHQSNGLSATHSGSADAAGGADLLDDQQLNDC 180

Query: 181 LSFLNESSSSRGEDLVDPRMELGRGLQNWTQSMDNAETPFHRRSYSASDVCFGSEDGGFG 240
           LSFL++ S S+ EDLVDP + L   +        + ET  HRRS+S  D  F S D GFG
Sbjct: 181 LSFLDD-SCSKTEDLVDPSIPLDYSVDG------DGETHLHRRSFSC-DASFVSGDDGFG 240

Query: 241 VGYKPCLYFARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQREELMRYKAA 300
            G KPC+YF+RG CKNG +CKF+HG + D++D +  +  SP K+E    Q EE+MR K A
Sbjct: 241 GGCKPCVYFSRGLCKNGESCKFIHGGYPDNMDGNGIVADSPRKMENFVRQHEEMMRLKLA 300

Query: 301 -QQQRLATASELMAGVSPSQYNKYINFLLQQQNETHRATAAALMMGDE-YHKFGMSRSER 360
            QQQRL  AS+++       Y K ++FLLQQ    H      L  GDE +      R ER
Sbjct: 301 YQQQRL--ASQILGRAPQLPYEKRMDFLLQQ----HAQRDGGLPFGDERFWSSSPGRLER 360

Query: 361 NDFLALAAEKRNSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVT 420
            +      ++ NSASRQIYLTFPADSTFKDEDV+ YFS FG VQDVRIPYQQKRMFGFV+
Sbjct: 361 MELAMHLGDQSNSASRQIYLTFPADSTFKDEDVATYFSLFGTVQDVRIPYQQKRMFGFVS 420

Query: 421 FVYPETVKHILAKGNPHFICESRVLVKPYKEKGKVPEKRQQH-QQQQLERGDFSPCLSPS 480
           F +PETVK +LA+GNPHFIC+SRVLVKPYKEKGKV +K+QQ   QQQ+ERG++SPC SPS
Sbjct: 421 FAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVLDKKQQQLLQQQIERGNYSPCSSPS 480

Query: 481 GLDARDPYDLNLGARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLH 540
           G+D R+  D +LG++M+Y  + MM RRK+ EQ +L +A+EL+ RR +NLQLP+ KN    
Sbjct: 481 GIDPREQSDFHLGSKMLYERREMM-RRKI-EQADLLRAIELERRRFINLQLPEFKNSVTL 540

Query: 541 HHHPHNLPICAPLSTESHNQMNQNIYPPDFINQEPSEGHENNQVTTNNAISTQQNFQLEE 600
           +HH  +  + +P    S    NQ+   PDF  Q    G +  +VT +   + + +     
Sbjct: 541 NHH-RSFSVGSPGYFSSAG--NQS---PDF--QSELNGADALKVTDD---TLELHPYPVV 600

Query: 601 NPCFIQSNSSGKATEDGYNSELL--EIHKSVEQVLPDSPFASPKKSALGQHSDFSSVKAD 647
           NP  + ++ S  A E+   SELL  +   ++E VLP + F  P  S+   H    S + +
Sbjct: 601 NPMSVNNSYSNGAKEETNKSELLDPDSGSTIELVLPSNLF--PSASSTDDHKTDDSAETN 626

[Close]

BLAST of Lcy03g008980 vs. TAIR 10
Match: AT5G12440.2 (CCCH-type zinc fingerfamily protein with RNA-binding domain )

HSP 1 Score: 456.8 bits (1174), Expect = 2.9e-128
Identity = 303/660 (45.91%), Postives = 409/660 (61.97%), Query Frame = 0


Query: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
           MD+ +AT+L+  KI++LEP+ A KI+G+LL+ D GD++L+ LA GPE++L S I K K+ 
Sbjct: 1   MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60

Query: 61  LG-FSLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGF-DLTKN-PSSPSSTSSW 120
           LG FS NS SSTP+SPSPLNPI RP  +   S  S     NGF D  +N PSSPSSTS W
Sbjct: 61  LGIFSNNSPSSTPTSPSPLNPICRPPLNGRGSSHS-----NGFMDFRRNSPSSPSSTSPW 120

Query: 121 SLSGITNN------VISPKSSPLLSYDSIRAAPFSMPPYMQHKNGFVDSEVIEEPQVNDY 180
           S +   N        ISPK +P+    S   +      +    +    ++++++ Q+ND 
Sbjct: 121 SFNNCINGNNGNNPHISPKHTPISKPFSSHQSNGLSATHSGSADAAGGADLLDDQQLNDC 180

Query: 181 LSFLNESSSSRGEDLVDPRMELGRGLQNWTQSMDNAETPFHRRSYSASDVCFGSEDGGFG 240
           LSFL++ S S+ EDLVDP + L   +        + ET  HRRS+S  D  F S D GFG
Sbjct: 181 LSFLDD-SCSKTEDLVDPSIPLDYSVDG------DGETHLHRRSFSC-DASFVSGDDGFG 240

Query: 241 VGYKPCLYFARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQREELMRYKAA 300
            G KPC+YF+RG CKNG +CKF+HG + D++D +  +  SP K+E    Q EE+MR K A
Sbjct: 241 GGCKPCVYFSRGLCKNGESCKFIHGGYPDNMDGNGIVADSPRKMENFVRQHEEMMRLKLA 300

Query: 301 -QQQRLATASELMAGVSPSQYNKYINFLLQQQNETHRATAAALMMGDE-YHKFGMSRSER 360
            QQQRL  AS+++       Y K ++FLLQQ    H      L  GDE +      R ER
Sbjct: 301 YQQQRL--ASQILGRAPQLPYEKRMDFLLQQ----HAQRDGGLPFGDERFWSSSPGRLER 360

Query: 361 NDFLALAAEKRNSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVT 420
            +      ++ NSASRQIYLTFPADSTFKDEDV+ YFS FG VQDVRIPYQQKRMFGFV+
Sbjct: 361 MELAMHLGDQSNSASRQIYLTFPADSTFKDEDVATYFSLFGTVQDVRIPYQQKRMFGFVS 420

Query: 421 FVYPETVKHILAKGNPHFICESRVLVKPYKEKGKVPEKRQQH-QQQQLERGDFSPCLSPS 480
           F +PETVK +LA+GNPHFIC+SRVLVKPYKEKGKV +K+QQ   QQQ+ERG++SPC SPS
Sbjct: 421 FAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVLDKKQQQLLQQQIERGNYSPCSSPS 480

Query: 481 GLDARDPYDLNLGARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLH 540
           G+D R+  D +LG++M+Y  + MM RRK+ EQ +L +A+EL+ RR +NLQLP+ KN    
Sbjct: 481 GIDPREQSDFHLGSKMLYERREMM-RRKI-EQADLLRAIELERRRFINLQLPEFKNSVTL 540

Query: 541 HHHPHNLPICAPLSTESHNQMNQNIYPPDFINQEPSEGHENNQVTTNNAISTQQNFQLEE 600
           +HH  +  + +P    S    NQ+   PDF  Q    G +  +VT +   + + +     
Sbjct: 541 NHH-RSFSVGSPGYFSSAG--NQS---PDF--QSELNGADALKVTDD---TLELHPYPVV 600

Query: 601 NPCFIQSNSSGKATEDGYNSELL--EIHKSVEQVLPDSPFASPKKSALGQHSDFSSVKAD 647
           NP  + ++ S  A E+   SELL  +   ++E VLP + F  P  S+   H    S + +
Sbjct: 601 NPMSVNNSYSNGAKEETNKSELLDPDSGSTIELVLPSNLF--PSASSTDDHKTDDSAETN 626

[Close]

BLAST of Lcy03g008980 vs. TAIR 10
Match: AT5G12440.3 (CCCH-type zinc fingerfamily protein with RNA-binding domain )

HSP 1 Score: 456.8 bits (1174), Expect = 2.9e-128
Identity = 303/660 (45.91%), Postives = 409/660 (61.97%), Query Frame = 0


Query: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
           MD+ +AT+L+  KI++LEP+ A KI+G+LL+ D GD++L+ LA GPE++L S I K K+ 
Sbjct: 1   MDSGDATSLLLTKIRSLEPDYAPKIIGYLLLHDFGDRDLMHLARGPESILQSTISKVKSL 60

Query: 61  LG-FSLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGF-DLTKN-PSSPSSTSSW 120
           LG FS NS SSTP+SPSPLNPI RP  +   S  S     NGF D  +N PSSPSSTS W
Sbjct: 61  LGIFSNNSPSSTPTSPSPLNPICRPPLNGRGSSHS-----NGFMDFRRNSPSSPSSTSPW 120

Query: 121 SLSGITNN------VISPKSSPLLSYDSIRAAPFSMPPYMQHKNGFVDSEVIEEPQVNDY 180
           S +   N        ISPK +P+    S   +      +    +    ++++++ Q+ND 
Sbjct: 121 SFNNCINGNNGNNPHISPKHTPISKPFSSHQSNGLSATHSGSADAAGGADLLDDQQLNDC 180

Query: 181 LSFLNESSSSRGEDLVDPRMELGRGLQNWTQSMDNAETPFHRRSYSASDVCFGSEDGGFG 240
           LSFL++ S S+ EDLVDP + L   +        + ET  HRRS+S  D  F S D GFG
Sbjct: 181 LSFLDD-SCSKTEDLVDPSIPLDYSVDG------DGETHLHRRSFSC-DASFVSGDDGFG 240

Query: 241 VGYKPCLYFARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQREELMRYKAA 300
            G KPC+YF+RG CKNG +CKF+HG + D++D +  +  SP K+E    Q EE+MR K A
Sbjct: 241 GGCKPCVYFSRGLCKNGESCKFIHGGYPDNMDGNGIVADSPRKMENFVRQHEEMMRLKLA 300

Query: 301 -QQQRLATASELMAGVSPSQYNKYINFLLQQQNETHRATAAALMMGDE-YHKFGMSRSER 360
            QQQRL  AS+++       Y K ++FLLQQ    H      L  GDE +      R ER
Sbjct: 301 YQQQRL--ASQILGRAPQLPYEKRMDFLLQQ----HAQRDGGLPFGDERFWSSSPGRLER 360

Query: 361 NDFLALAAEKRNSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVT 420
            +      ++ NSASRQIYLTFPADSTFKDEDV+ YFS FG VQDVRIPYQQKRMFGFV+
Sbjct: 361 MELAMHLGDQSNSASRQIYLTFPADSTFKDEDVATYFSLFGTVQDVRIPYQQKRMFGFVS 420

Query: 421 FVYPETVKHILAKGNPHFICESRVLVKPYKEKGKVPEKRQQH-QQQQLERGDFSPCLSPS 480
           F +PETVK +LA+GNPHFIC+SRVLVKPYKEKGKV +K+QQ   QQQ+ERG++SPC SPS
Sbjct: 421 FAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVLDKKQQQLLQQQIERGNYSPCSSPS 480

Query: 481 GLDARDPYDLNLGARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLH 540
           G+D R+  D +LG++M+Y  + MM RRK+ EQ +L +A+EL+ RR +NLQLP+ KN    
Sbjct: 481 GIDPREQSDFHLGSKMLYERREMM-RRKI-EQADLLRAIELERRRFINLQLPEFKNSVTL 540

Query: 541 HHHPHNLPICAPLSTESHNQMNQNIYPPDFINQEPSEGHENNQVTTNNAISTQQNFQLEE 600
           +HH  +  + +P    S    NQ+   PDF  Q    G +  +VT +   + + +     
Sbjct: 541 NHH-RSFSVGSPGYFSSAG--NQS---PDF--QSELNGADALKVTDD---TLELHPYPVV 600

Query: 601 NPCFIQSNSSGKATEDGYNSELL--EIHKSVEQVLPDSPFASPKKSALGQHSDFSSVKAD 647
           NP  + ++ S  A E+   SELL  +   ++E VLP + F  P  S+   H    S + +
Sbjct: 601 NPMSVNNSYSNGAKEETNKSELLDPDSGSTIELVLPSNLF--PSASSTDDHKTDDSAETN 626

[Close]

BLAST of Lcy03g008980 vs. TAIR 10
Match: AT3G21100.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 448.0 bits (1151), Expect = 1.4e-125
Identity = 304/669 (45.44%), Postives = 408/669 (60.99%), Query Frame = 0


Query: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
           MD  + T++++ KI+ LEP+ ASKI+G+LL+QDLG  +L+RLA GPETLL S+ LKAK+ 
Sbjct: 1   MDPGDPTSILFTKIRTLEPDFASKIIGYLLLQDLGKTDLMRLALGPETLLQSVCLKAKSA 60

Query: 61  LGFSLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSSTSSWSLS 120
           LG S N SS   S+ SPLNPI+RP N +  S S    P NGF  ++NP SPS  +  SL 
Sbjct: 61  LGLSSNGSS---SASSPLNPISRPINIHRHSLSHSS-PGNGF--SRNPLSPSFATPGSLG 120

Query: 121 GITNNVISP--KSSPLLSYDSIRAAPFSMPPYMQHKNGFVDSEVIEEPQVNDYLSFLNES 180
              N + SP   SS L + D   A            +   + + ++E Q+ +YLSFLNES
Sbjct: 121 SNPNMISSPFQASSSLFASDGAAAG-----------DSTGNGDFLDEQQLGNYLSFLNES 180

Query: 181 SSSRGEDLVDPRMELGRGLQNWTQSMDNAETPFHRRSYSASDVCFGSEDGGFGVGYKPCL 240
           SS   ++ +DP          +  S DN +   H+RS+SASD CFGSE+ GFG G     
Sbjct: 181 SSKNNDESLDP----------FGFSADNGDAHLHKRSFSASDACFGSEEPGFGGG----- 240

Query: 241 YFARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQREELMRYKAAQQQRLAT 300
                    G N +FLHG   D  D S    GSP  +     Q+EE++R K AQ+QR+A 
Sbjct: 241 ---------GYN-RFLHGGLGDDFD-SPGGFGSPDYVS---RQQEEIVRMKMAQRQRMAA 300

Query: 301 ASELMAGVSPSQYNKYINFLLQQQNETHRATAAALMMGDEYHKFGM-SRSERNDFLALAA 360
           A  L A  SP  Y K +NFLL Q+N  HR+ A     G+E + FG   R ER++F+ +  
Sbjct: 301 AQYLAATGSPMSYEKGLNFLLHQRN-AHRSGAG--QFGEEGYWFGSPGRHERDEFMGM-G 360

Query: 361 EKRNSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVK 420
           +K NSAS+QIYLTFPADS+F DEDVS YF  FGPVQDVRIPYQQKRMFGFVTF++ ETV+
Sbjct: 361 DKSNSASKQIYLTFPADSSFTDEDVSNYFGNFGPVQDVRIPYQQKRMFGFVTFLHSETVR 420

Query: 421 HILAKGNPHFICESRVLVKPYKEKGKVPEKRQQHQ-QQQLERGDFSPCLSPSGLDARDPY 480
            ILA+GNPHFIC+SRVLVKPYKEKG++ EKRQQ Q  QQ+ERG+FSP  SPSG+D+RD +
Sbjct: 421 IILARGNPHFICDSRVLVKPYKEKGRILEKRQQQQLLQQMERGNFSPGSSPSGMDSRDLF 480

Query: 481 DLNLGARMMYNTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLP 540
           D +L  RM  NTQ MM  R+  EQ +LQQA+E Q RR L+LQLPD+ ++   HH   +L 
Sbjct: 481 DSHLAPRMFSNTQEMM--RRKAEQADLQQAIEFQRRRFLSLQLPDMDSESFLHHQ-RSLS 540

Query: 541 ICAPLSTESHNQMNQN-IYPPDFINQEPSEGHENNQVTTNNAISTQQNFQLEENPCFIQS 600
           I +P+      ++NQ+ ++  +  + E  EG+ ++              Q E    F+  
Sbjct: 541 IGSPVHFSP--RVNQSMLFRSESTSDEVFEGNGDS------------GHQSEATRAFLSD 599

Query: 601 NSSGKATEDGYNSELLEIHK-SVEQVLPDSPFASPKKSALGQHSDFSSVKADGCGPNTLP 660
                + E GYNS L +  + S+E  LPDS FASP K+   QH +F   + + C   ++ 
Sbjct: 601 TGHNISQERGYNSHLNKGQETSLENTLPDSFFASPSKTGETQHPEF---EKENCATISVT 599

Query: 661 SSSQSNSSL 664
           + +++ SSL
Sbjct: 661 TENKAASSL 599

[Close]

BLAST of Lcy03g008980 vs. TAIR 10
Match: AT3G51950.1 (Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 330.5 bits (846), Expect = 3.2e-90
Identity = 273/685 (39.85%), Postives = 351/685 (51.24%), Query Frame = 0


Query: 1   MDAYEATTLVYAKIKNLEPENASKIMGFLLIQDLGDKELIRLAFGPETLLHSLILKAKAH 60
           MD YEAT +V ++I++L+PENASKIMG LL+QD G+KE+IRLAFGPETL+HS+I+KAK  
Sbjct: 1   MDGYEATRIVLSRIQSLDPENASKIMGLLLLQDHGEKEMIRLAFGPETLVHSVIVKAKKE 60

Query: 61  LGFSLNSSSSTPSSPSPLNPIARPSNSNPFSQSSPRIPNNGFDLTKNPSSPSSTSSWSLS 120
           LG  +N S S                  P+S                             
Sbjct: 61  LGL-MNCSRS------------------PWSHQ--------------------------- 120

Query: 121 GITNNVISPKSSPLLSYDSIRAAPFSMPPYMQHKNGFVDSEVIEEPQVNDYLSFLNESSS 180
              + +ISPK++   S +     P S+P Y    NG   S  +     ND+   L +  +
Sbjct: 121 ---DELISPKNNRGSSLN-----PASLPFY---ANGGRSSRDL----TNDF--ELMDDMN 180

Query: 181 SRGEDLVDPRMELGRGLQNWTQSMDNAETPFHRRSYSA--SDVCFGSEDGGFGVGYKPCL 240
           SR  D +                        H RS S     + +G  D   G G  PC 
Sbjct: 181 SRSTDFLG---------------------SVHARSGSCVLDGLGYGG-DSDLGFGGVPCS 240

Query: 241 YFARGFCKNGSNCKFLHGDFSDSVDPSAAIVGSPSKLEGLFEQREELMRYKAAQQQRLAT 300
           YFARGFCKNG++C+F+H       D  A +VGSPS++E L   R   +  + A      T
Sbjct: 241 YFARGFCKNGASCRFVHS------DGGADLVGSPSRIELL---RSNSVPPRLA--HHFMT 300

Query: 301 ASELMAGVSPSQYNKYINFLLQQQNETHRATAAALMMGDEYHKFGMSRSERNDFLALAAE 360
            S L     PS   K +N    QQN+  RA AAALM+GDE  K G  R ER D  A+A  
Sbjct: 301 RSSL-----PSFSTKGVNL---QQNDVQRA-AAALMIGDELQKLGRWRPERIDLSAMAC- 360

Query: 361 KRNSASRQIYLTFPADSTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVKH 420
               ASRQIYLTFPADS F++EDVS YFS FGPVQDVRIPYQQKRMFGFVTFVYPETVK 
Sbjct: 361 ---PASRQIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVKS 420

Query: 421 ILAKGNPHFICESRVLVKPYKEKGKVPEKRQQHQQQQLERGDFSPCLSPSGLDARDPYDL 480
           ILAKGNPHF+C+SRVLVKPYKEKGKVP+K + +Q  + E       LSP+GLD+  P D+
Sbjct: 421 ILAKGNPHFVCDSRVLVKPYKEKGKVPDKYRTNQTTERE-------LSPTGLDS-SPRDV 480

Query: 481 NLGARMMY-NTQGMMLRRKLEEQVELQQALELQGRRLLNLQLPDLKNDQLHHHHPHNLPI 540
            LG R  Y NTQ ++ R K EE++     LELQ RRL+NLQL D+K          +  +
Sbjct: 481 -LGGRGFYNNTQDVLWRSKFEEEI-----LELQSRRLMNLQLLDVKK---------HFQL 524

Query: 541 CAPLSTESHNQMNQNIYPP---DFINQEPSEGHENNQVTTNNAISTQQNFQLEENPCFIQ 600
            +P +  S N  +Q++  P     I +E   G +                          
Sbjct: 541 NSPTNIHSPNPFSQSLISPRPLSVIKREYDGGEKGK------------------------ 524

Query: 601 SNSSGKATEDGYNSELLEIHKSVEQVLPDSPFASP-------KKSALGQHSDF---SSVK 660
                 ++++G + + + + + +E  LPDSPFASP         SA    SD    SS  
Sbjct: 601 -----GSSKEGSDDDTMNLPERLEDSLPDSPFASPAHHLLLFADSADNNGSDLWSPSSDN 524

Query: 661 ADGCGPNTLPSSSQS-NSSLPTGPA 669
            D   P+TL  S  S N  +P  PA
Sbjct: 661 DDNSTPSTLSDSFNSFNYQMPRLPA 524

The following BLAST results are available for this feature:

BLAST of Lcy03g008980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94CJ8	4.1e-127	45.91	Zinc finger CCCH domain-containing protein 55 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q0D3J9	6.4e-112	44.23	Zinc finger CCCH domain-containing protein 53 OS=Oryza sativa subsp. japonica OX...	[more]
Q10M00	3.0e-109	42.37	Zinc finger CCCH domain-containing protein 22 OS=Oryza sativa subsp. japonica OX...	[more]
Q10LZ9	1.6e-102	40.56	Zinc finger CCCH domain-containing protein 23 OS=Oryza sativa subsp. japonica OX...	[more]
Q9SV09	4.5e-89	39.85	Zinc finger CCCH domain-containing protein 46 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Lcy03g008980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D5S8	0.0e+00	96.90	Zinc finger CCCH domain-containing protein 46-like isoform X1 OS=Cucumis melo va...	[more]
A0A0A0M077	0.0e+00	96.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G616250 PE=4 SV=1	[more]
A0A5A7VNB1	0.0e+00	97.26	Zinc finger CCCH domain-containing protein 46-like isoform X1 OS=Cucumis melo va...	[more]
A0A1S4DYU9	0.0e+00	97.11	zinc finger CCCH domain-containing protein 46-like isoform X1 OS=Cucumis melo OX...	[more]
A0A6J1DLR7	0.0e+00	94.53	zinc finger CCCH domain-containing protein 55-like OS=Momordica charantia OX=367...	[more]

BLAST of Lcy03g008980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879075.1	0.0e+00	97.63	zinc finger CCCH domain-containing protein 55-like isoform X1 [Benincasa hispida...	[more]
TYK18918.1	0.0e+00	96.90	zinc finger CCCH domain-containing protein 46-like isoform X1 [Cucumis melo var....	[more]
XP_031740548.1	0.0e+00	96.59	zinc finger CCCH domain-containing protein 46 isoform X1 [Cucumis sativus] >XP_0...	[more]
KAA0067215.1	0.0e+00	97.26	zinc finger CCCH domain-containing protein 46-like isoform X1 [Cucumis melo var....	[more]
XP_016900900.1	0.0e+00	97.11	PREDICTED: zinc finger CCCH domain-containing protein 46-like isoform X1 [Cucumi...	[more]

BLAST of Lcy03g008980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12440.1	2.9e-128	45.91	CCCH-type zinc fingerfamily protein with RNA-binding domain	[more]
AT5G12440.2	2.9e-128	45.91	CCCH-type zinc fingerfamily protein with RNA-binding domain	[more]
AT5G12440.3	2.9e-128	45.91	CCCH-type zinc fingerfamily protein with RNA-binding domain	[more]
AT3G21100.2	1.4e-125	45.44	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G51950.1	3.2e-90	39.85	Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing ...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 366..436 e-value: 6.1E-10 score: 49.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 377..424 e-value: 1.9E-7 score: 30.8
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 365..441 score: 10.326077
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 233..257 e-value: 6.8E-5 score: 32.3
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 234..256 e-value: 3.1E-6 score: 27.0
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 231..258 score: 14.276691
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 357..462 e-value: 1.1E-12 score: 50.1
None	No IPR available	GENE3D	1.20.120.1350		coord: 232..306 e-value: 4.1E-6 score: 28.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 648..668
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 439..454
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 439..464
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 622..674
None	No IPR available	PANTHER	PTHR24009	RNA-BINDING (RRM/RBD/RNP MOTIFS)	coord: 1..659
None	No IPR available	PANTHER	PTHR24009:SF20	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 55	coord: 1..659
IPR034365	AtC3H46-like, RNA recognition motif	CDD	cd12458	RRM_AtC3H46_like	coord: 367..436 e-value: 2.25415E-40 score: 139.895
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 377..459
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 234..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g008980.1	Lcy03g008980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding