Homology
BLAST of Lcy03g008710 vs. ExPASy Swiss-Prot
Match:
Q9LFC5 (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX=3702 GN=At5g01110 PE=2 SV=1)
HSP 1 Score: 840.1 bits (2169), Expect = 1.9e-242
Identity = 405/682 (59.38%), Postives = 526/682 (77.13%), Query Frame = 0
Query: 70 VSNSFLVEKILFSLKQNNVSSLSSSLFRLNPSSLVEILYRCRENLHLGLKFIGLVSSNCP 129
VS+SFLVEKI FSLKQ N +++ + L RLNP ++VE+LYRCR +L LG +F+ + + P
Sbjct: 49 VSDSFLVEKICFSLKQGN-NNVRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFP 108
Query: 130 NFKHSSLSLSAMVHFLVRCRRLSEAQACILRMVRKSGVSRVEVVESLVSTCDNFGSIDLV 189
NFKH+SLSLSAM+H LVR RLS+AQ+C+LRM+R+SGVSR+E+V SL ST N GS D V
Sbjct: 109 NFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSV 168
Query: 190 SDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVKIGWVDLAWEIYGEAV 249
DLL+RTYVQARKLRE EAF +LRSKG +VSI+ACN+L+G LV+IGWV+LAW +Y E
Sbjct: 169 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 228
Query: 250 RGGVELNVYTLNIMVNALCKDRKIESVNLFLSDMEKKGVFPDIVTYNTLISAYCREGLVE 309
R GV +NVYTLNIMVNALCKD K+E V FLS +++KGV+PDIVTYNTLISAY +GL+E
Sbjct: 229 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 288
Query: 310 EAFQLLNSISGKGMKPGLLTYNAIINGLCKIGKYNRAKDILNEMLQLGLRPDPATYNTLL 369
EAF+L+N++ GKG PG+ TYN +INGLCK GKY RAK++ EML+ GL PD TY +LL
Sbjct: 289 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 348
Query: 370 VEICRRDNISEAEEIFDEMSRHGVLPDLVSFSSLIRVLARNRHLDRAFMYFRDMKIIGLV 429
+E C++ ++ E E++F +M V+PDLV FSS++ + R+ +LD+A MYF +K GL+
Sbjct: 349 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 408
Query: 430 PDNVIYAILIDGFCRIGAISDALKMRDEMLAQGCVMDVVVYNTILNGLCKKKLFVDADML 489
PDNVIY ILI G+CR G IS A+ +R+EML QGC MDVV YNTIL+GLCK+K+ +AD L
Sbjct: 409 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 468
Query: 490 FNEMVERGVFPDFYTFTTLIHGYCKDGNMDKALNLFGTMIRTNLKPDIVTYNTLIDGFCK 549
FNEM ER +FPD YT T LI G+CK GN+ A+ LF M ++ D+VTYNTL+DGF K
Sbjct: 469 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 528
Query: 550 VGEMDRAKELWDDMIRKDILPNHISYGIVINGFCNSGLLSEALHLCDQMVERGIKPNLVT 609
VG++D AKE+W DM+ K+ILP ISY I++N C+ G L+EA + D+M+ + IKP ++
Sbjct: 529 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMI 588
Query: 610 YNTLIKGYCRSGDIPSAYECLSKMISNGIIPDGISYNTLIDGYLKEENLEKAFVLINEME 669
N++IKGYCRSG+ L KMIS G +PD ISYNTLI G+++EEN+ KAF L+ +ME
Sbjct: 589 CNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKME 648
Query: 670 KQ--GLQLDVITYNVILNGFCAKGRMQEAEQVLRKMIENGIHPDRTTYSSLINGHVSQDN 729
++ GL DV TYN IL+GFC + +M+EAE VLRKMIE G++PDR+TY+ +ING VSQDN
Sbjct: 649 EEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDN 708
Query: 730 MKDAFRFHDEMLQRGLVPDDRF 750
+ +AFR HDEMLQRG PDD+F
Sbjct: 709 LTEAFRIHDEMLQRGFSPDDKF 729
BLAST of Lcy03g008710 vs. ExPASy Swiss-Prot
Match:
Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)
HSP 1 Score: 370.9 bits (951), Expect = 3.3e-101
Identity = 215/695 (30.94%), Postives = 375/695 (53.96%), Query Frame = 0
Query: 43 SLPKFHSNTALGSLQTYG---------APGP---PNHDPVSNSFLVEKILFSLKQNNVSS 102
+L F + L SLQ+ G P P P V ++ V +I +K
Sbjct: 14 TLSSFRNFIQLFSLQSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEP 73
Query: 103 LSSSL----FRLNPSSLVEILYRCRENLHLGLKFIGLVSSNCPNFKHSSL-SLSAMVHFL 162
L SL + L+ +L + + + L L F S + S+L SL ++H
Sbjct: 74 LRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSR----RDSNLESLCIVIHLA 133
Query: 163 VRCRRLSEAQACILRMVRKSGV----SRVEVVESLVSTCDNFGSIDLVSDLLVRTYVQAR 222
V + L AQ+ I + + S V+ + LV T ++GS V D+ + V
Sbjct: 134 VASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFG 193
Query: 223 KLREGSEAFRILRSKGVSVSINACNSLLGGLVKIGW-VDLAWEIYGEAVRGGVELNVYTL 282
LRE F + + G+ +S+++CN L L K + A ++ E GV NV +
Sbjct: 194 LLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASY 253
Query: 283 NIMVNALCKDRKIESVNLFLSDMEKKGVFPDIVTYNTLISAYCREGLVEEAFQLLNSISG 342
NI+++ +C+ +I+ + L ME KG PD+++Y+T+++ YCR G +++ ++L+ +
Sbjct: 254 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 313
Query: 343 KGMKPGLLTYNAIINGLCKIGKYNRAKDILNEMLQLGLRPDPATYNTLLVEICRRDNISE 402
KG+KP Y +II LC+I K A++ +EM++ G+ PD Y TL+ C+R +I
Sbjct: 314 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 373
Query: 403 AEEIFDEMSRHGVLPDLVSFSSLIRVLARNRHLDRAFMYFRDMKIIGLVPDNVIYAILID 462
A + F EM + PD+++++++I + + A F +M GL PD+V + LI+
Sbjct: 374 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 433
Query: 463 GFCRIGAISDALKMRDEMLAQGCVMDVVVYNTILNGLCKKKLFVDADMLFNEMVERGVFP 522
G+C+ G + DA ++ + M+ GC +VV Y T+++GLCK+ A+ L +EM + G+ P
Sbjct: 434 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 493
Query: 523 DFYTFTTLIHGYCKDGNMDKALNLFGTMIRTNLKPDIVTYNTLIDGFCKVGEMDRAKELW 582
+ +T+ ++++G CK GN+++A+ L G L D VTY TL+D +CK GEMD+A+E+
Sbjct: 494 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 553
Query: 583 DDMIRKDILPNHISYGIVINGFCNSGLLSEALHLCDQMVERGIKPNLVTYNTLIKGYCRS 642
+M+ K + P +++ +++NGFC G+L + L + M+ +GI PN T+N+L+K YC
Sbjct: 554 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 613
Query: 643 GDIPSAYECLSKMISNGIIPDGISYNTLIDGYLKEENLEKAFVLINEMEKQGLQLDVITY 702
++ +A M S G+ PDG +Y L+ G+ K N+++A+ L EM+ +G + V TY
Sbjct: 614 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 673
Query: 703 NVILNGFCAKGRMQEAEQVLRKMIENGIHPDRTTY 716
+V++ GF + + EA +V +M G+ D+ +
Sbjct: 674 SVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
BLAST of Lcy03g008710 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 353.2 bits (905), Expect = 7.2e-96
Identity = 202/679 (29.75%), Postives = 356/679 (52.43%), Query Frame = 0
Query: 71 SNSFLVEKILFSLKQN--NVSSLSSSLFRLNPSSLVEILYRCRENLHLGLKFIGLVSSNC 130
S+S L +K L LK++ + LS++ P + +L + + + L LKF+ +
Sbjct: 20 SDSLLADKALTFLKRHPYQLHHLSAN---FTPEAASNLLLKSQNDQALILKFLNWAN--- 79
Query: 131 PNFKHSSLSLSAMVHFLVRCRRLSEAQACILRMVRKSGVSRVE--VVESLVSTCDNFGSI 190
P+ + +H L + + AQ + K+ V +SL T D S
Sbjct: 80 PHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYST 139
Query: 191 DLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVKIGW-VDLAWEIY 250
V DL+V++Y + + + + ++ G + + N++L ++ + A ++
Sbjct: 140 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 199
Query: 251 GEAVRGGVELNVYTLNIMVNALCKDRKIESVNLFLSDMEKKGVFPDIVTYNTLISAYCRE 310
E + V NV+T NI++ C I+ ME KG P++VTYNTLI YC+
Sbjct: 200 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 259
Query: 311 GLVEEAFQLLNSISGKGMKPGLLTYNAIINGLCKIGKYNRAKDILNEMLQLGLRPDPATY 370
+++ F+LL S++ KG++P L++YN +INGLC+ G+ +L EM + G D TY
Sbjct: 260 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 319
Query: 371 NTLLVEICRRDNISEAEEIFDEMSRHGVLPDLVSFSSLIRVLARNRHLDRAFMYFRDMKI 430
NTL+ C+ N +A + EM RHG+ P +++++SLI + + +++RA + M++
Sbjct: 320 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 379
Query: 431 IGLVPDNVIYAILIDGFCRIGAISDALKMRDEMLAQGCVMDVVVYNTILNGLCKKKLFVD 490
GL P+ Y L+DGF + G +++A ++ EM G VV YN ++NG C D
Sbjct: 380 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 439
Query: 491 ADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDKALNLFGTMIRTNLKPDIVTYNTLID 550
A + +M E+G+ PD +++T++ G+C+ ++D+AL + M+ +KPD +TY++LI
Sbjct: 440 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 499
Query: 551 GFCKVGEMDRAKELWDDMIRKDILPNHISYGIVINGFCNSGLLSEALHLCDQMVERGIKP 610
GFC+ A +L+++M+R + P+ +Y +IN +C G L +AL L ++MVE+G+ P
Sbjct: 500 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 559
Query: 611 NLVTYNTLIKGYCRSGDIPSAYECLSKMISNGIIPDGISYNTLIDGYLKEENLEKAFVLI 670
++VTY+ LI G + A L K+ +P ++Y+TLI+ N+E V+
Sbjct: 560 DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC---SNIEFKSVV- 619
Query: 671 NEMEKQGLQLDVITYNVILNGFCAKGRMQEAEQVLRKMIENGIHPDRTTYSSLINGHVSQ 730
++ GFC KG M EA+QV M+ PD T Y+ +I+GH
Sbjct: 620 ----------------SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRA 672
Query: 731 DNMKDAFRFHDEMLQRGLV 745
+++ A+ + EM++ G +
Sbjct: 680 GDIRKAYTLYKEMVKSGFL 672
BLAST of Lcy03g008710 vs. ExPASy Swiss-Prot
Match:
Q9FJE6 (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana OX=3702 GN=At5g59900 PE=3 SV=1)
HSP 1 Score: 343.2 bits (879), Expect = 7.4e-93
Identity = 204/665 (30.68%), Postives = 350/665 (52.63%), Query Frame = 0
Query: 90 SLSSSLF--RLNPSSLVEILYRCRENLHLGLKFIGLVSSNCPNFKHSSLSLSAMVHFLVR 149
+LSS L RL + EIL ++ LGL+F + + F HS+ S ++H LV+
Sbjct: 58 ALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLH-RGFDHSTASFCILIHALVK 117
Query: 150 CRRL----SEAQACILRMVRKSGVSRVEVVESLVSTCDNFGSIDLVSDLLVRTYVQARKL 209
S Q +LR ++ S V V+ S C S DLL++ YV++R++
Sbjct: 118 ANLFWPASSLLQTLLLRALKPSDV--FNVLFSCYEKCKLSSSSSF--DLLIQHYVRSRRV 177
Query: 210 REGSEAFRILRSK-GVSVSINACNSLLGGLVKIGWVDLAWEIYGEAVRGGVELNVYTLNI 269
+G F+++ +K + + ++LL GLVK LA E++ + V G+ +VY
Sbjct: 178 LDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTG 237
Query: 270 MVNALCKDRKIESVNLFLSDMEKKGVFPDIVTYNTLISAYCREGLVEEAFQLLNSISGKG 329
++ +LC+ + + ++ ME G +IV YN LI C++ V EA + ++GK
Sbjct: 238 VIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKD 297
Query: 330 MKPGLLTYNAIINGLCKIGKYNRAKDILNEMLQLGLRPDPATYNTLLVEICRRDNISEAE 389
+KP ++TY ++ GLCK+ ++ ++++EML L P A ++L+ + +R I EA
Sbjct: 298 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 357
Query: 390 EIFDEMSRHGVLPDLVSFSSLIRVLARNRHLDRAFMYFRDMKIIGLVPDNVIYAILIDGF 449
+ + GV P+L +++LI L + R A + F M IGL P++V Y+ILID F
Sbjct: 358 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 417
Query: 450 CRIGAISDALKMRDEMLAQGCVMDVVVYNTILNGLCKKKLFVDADMLFNEMVERGVFPDF 509
CR G + AL EM+ G + V YN+++NG CK A+ EM+ + + P
Sbjct: 418 CRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTV 477
Query: 510 YTFTTLIHGYCKDGNMDKALNLFGTMIRTNLKPDIVTYNTLIDGFCKVGEMDRAKELWDD 569
T+T+L+ GYC G ++KAL L+ M + P I T+ TL+ G + G + A +L+++
Sbjct: 478 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE 537
Query: 570 MIRKDILPNHISYGIVINGFCNSGLLSEALHLCDQMVERGIKPNLVTYNTLIKGYCRSGD 629
M ++ PN ++Y ++I G+C G +S+A +M E+GI P+ +Y LI G C +G
Sbjct: 538 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ 597
Query: 630 IPSAYECLSKMISNGIIPDGISYNTLIDGYLKEENLEKAFVLINEMEKQGLQLDVITYNV 689
A + + + I Y L+ G+ +E LE+A + EM ++G+ LD++ Y V
Sbjct: 598 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 657
Query: 690 ILNGFCAKGRMQEAEQVLRKMIENGIHPDRTTYSSLINGHVSQDNMKDAFRFHDEMLQRG 748
+++G + +L++M + G+ PD Y+S+I+ + K+AF D M+ G
Sbjct: 658 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 717
BLAST of Lcy03g008710 vs. ExPASy Swiss-Prot
Match:
Q9CA58 (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1)
HSP 1 Score: 341.7 bits (875), Expect = 2.2e-92
Identity = 174/535 (32.52%), Postives = 289/535 (54.02%), Query Frame = 0
Query: 213 LRSKGVSVSINACNSLLGGLVKIGWVDLAWEIYGEAVRGGVELNVYTLNIMVNALCKDRK 272
+ S+G +++ A +++GG + + +E++G+ + GV L + T N ++ LCK
Sbjct: 172 MSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGD 231
Query: 273 IESVNLFLSDMEKKGVFPDIVTYNTLISAYCREGLVEEAFQLLNSISGKGMKPGLLTYNA 332
++ L + K+GV P++ TYN I C+ G ++ A +++ + +G KP ++TYN
Sbjct: 232 VKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNN 291
Query: 333 IINGLCKIGKYNRAKDILNEMLQLGLRPDPATYNTLLVEICRRDNISEAEEIFDEMSRHG 392
+I GLCK K+ A+ L +M+ GL PD TYNTL+ C+ + AE I + +G
Sbjct: 292 LIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNG 351
Query: 393 VLPDLVSFSSLIRVLARNRHLDRAFMYFRDMKIIGLVPDNVIYAILIDGFCRIGAISDAL 452
+PD ++ SLI L +RA F + G+ P+ ++Y LI G G I +A
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 453 KMRDEMLAQGCVMDVVVYNTILNGLCKKKLFVDADMLFNEMVERGVFPDFYTFTTLIHGY 512
++ +EM +G + +V +N ++NGLCK DAD L M+ +G FPD +TF LIHGY
Sbjct: 412 QLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471
Query: 513 CKDGNMDKALNLFGTMIRTNLKPDIVTYNTLIDGFCKVGEMDRAKELWDDMIRKDILPNH 572
M+ AL + M+ + PD+ TYN+L++G CK + + E + M+ K PN
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNL 531
Query: 573 ISYGIVINGFCNSGLLSEALHLCDQMVERGIKPNLVTYNTLIKGYCRSGDIPSAYECLSK 632
++ I++ C L EAL L ++M + + P+ VT+ TLI G+C++GD+ AY K
Sbjct: 532 FTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRK 591
Query: 633 MISNGIIPDGI-SYNTLIDGYLKEENLEKAFVLINEMEKQGLQLDVITYNVILNGFCAKG 692
M + +YN +I + ++ N+ A L EM + L D TY ++++GFC G
Sbjct: 592 MEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTG 651
Query: 693 RMQEAEQVLRKMIENGIHPDRTTYSSLINGHVSQDNMKDAFRFHDEMLQRGLVPD 747
+ + L +M+ENG P TT +IN +D + +A M+Q+GLVP+
Sbjct: 652 NVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
BLAST of Lcy03g008710 vs. ExPASy TrEMBL
Match:
A0A6J1I8K2 (pentatricopeptide repeat-containing protein At5g01110 OS=Cucurbita maxima OX=3661 GN=LOC111472364 PE=4 SV=1)
HSP 1 Score: 1300.0 bits (3363), Expect = 0.0e+00
Identity = 655/755 (86.75%), Postives = 690/755 (91.39%), Query Frame = 0
Query: 1 MAAHPLPLPKSTFRTRILASTFTCAAPFLRTNSNSFRPHYIYSLPKFHSNTALGSLQTYG 60
MAAH LPLPK TFRTRILASTFT A P LR NS SF H IYSLPKFHS
Sbjct: 9 MAAHRLPLPKPTFRTRILASTFTYATPLLRANSISFTFHLIYSLPKFHSIHD-------E 68
Query: 61 APGPPNHDPV------SNSFLVEKILFSLKQNNVSSLSSSLFRLNPSSLVEILYRCRENL 120
A G NHDPV SNSFLVEKILFSLKQNNVSSLS+SLFRLNPS+LVE+LY CRENL
Sbjct: 69 ASGSSNHDPVSSSVSASNSFLVEKILFSLKQNNVSSLSNSLFRLNPSALVEVLYGCRENL 128
Query: 121 HLGLKFIGLVSSNCPNFKHSSLSLSAMVHFLVRCRRLSEAQACILRMVRKSGVSRVEVVE 180
HLGLKFI LVSS+CPN KHSS+SLSAMVHFLVR RRLSEAQACILRMVRKSGVSRVEVVE
Sbjct: 129 HLGLKFIDLVSSSCPNLKHSSISLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVEVVE 188
Query: 181 SLVSTCDNFGSIDLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVK 240
S+VSTC NFGSI LVSDLLVRTYVQARKLREGSEAFRIL+SKGVSVSINACNSLLGGLVK
Sbjct: 189 SIVSTCGNFGSIGLVSDLLVRTYVQARKLREGSEAFRILKSKGVSVSINACNSLLGGLVK 248
Query: 241 IGWVDLAWEIYGEAVRGGVELNVYTLNIMVNALCKDRKIESVNLFLSDMEKKGVFPDIVT 300
IGWVDLAWEI+GE VRGG ELNVYTLNIMVNALCKD +I +VNLFLSDMEKKGVFPDIVT
Sbjct: 249 IGWVDLAWEIFGEVVRGGTELNVYTLNIMVNALCKDGRIANVNLFLSDMEKKGVFPDIVT 308
Query: 301 YNTLISAYCREGLVEEAFQLLNSISGKGMKPGLLTYNAIINGLCKIGKYNRAKDILNEML 360
YNTLISAYCREG VEEAF+LLNSIS KGM+PGLLTYNAIINGLCKI KYNRAKD+LN+M
Sbjct: 309 YNTLISAYCREGFVEEAFELLNSISSKGMEPGLLTYNAIINGLCKIRKYNRAKDVLNQMS 368
Query: 361 QLGLRPDPATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDLVSFSSLIRVLARNRHLD 420
QLGL+PD ATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDL+SFSSLI VLARN +LD
Sbjct: 369 QLGLKPDAATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDLISFSSLISVLARNGNLD 428
Query: 421 RAFMYFRDMKIIGLVPDNVIYAILIDGFCRIGAISDALKMRDEMLAQGCVMDVVVYNTIL 480
A YFRDMK IGLVPDNVIY ILIDGFCR GAISDALKMRDEMLAQGCV+DVV YNTIL
Sbjct: 429 LALTYFRDMKNIGLVPDNVIYTILIDGFCRNGAISDALKMRDEMLAQGCVVDVVAYNTIL 488
Query: 481 NGLCKKKLFVDADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDKALNLFGTMIRTNLK 540
NGLCKKK+ VDADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMD+ALNLFGTM+RTNLK
Sbjct: 489 NGLCKKKMLVDADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDRALNLFGTMVRTNLK 548
Query: 541 PDIVTYNTLIDGFCKVGEMDRAKELWDDMIRKDILPNHISYGIVINGFCNSGLLSEALHL 600
PDIVTYNTLIDGFCKVG+M RAK+LWDDMIRKDI+PNH+SYG VINGFC+SG LSEALHL
Sbjct: 549 PDIVTYNTLIDGFCKVGDMKRAKDLWDDMIRKDIVPNHVSYGTVINGFCSSGYLSEALHL 608
Query: 601 CDQMVERGIKPNLVTYNTLIKGYCRSGDIPSAYECLSKMISNGIIPDGISYNTLIDGYLK 660
CDQMVERGIKPNLVTYNTLIKGYCRS D+ A+ECLSKMISNGIIPD ISYNTLIDGYLK
Sbjct: 609 CDQMVERGIKPNLVTYNTLIKGYCRSADMLKAHECLSKMISNGIIPDRISYNTLIDGYLK 668
Query: 661 EENLEKAFVLINEMEKQGLQLDVITYNVILNGFCAKGRMQEAEQVLRKMIENGIHPDRTT 720
+ENL KAFV+INEMEKQGL+LDVITYN+ILNG+CAKGRM EAEQVLRKMIENG++PDR T
Sbjct: 669 DENLGKAFVMINEMEKQGLKLDVITYNLILNGYCAKGRMLEAEQVLRKMIENGVNPDRAT 728
Query: 721 YSSLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF 750
YSSLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF
Sbjct: 729 YSSLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF 756
BLAST of Lcy03g008710 vs. ExPASy TrEMBL
Match:
A0A6J1F5T7 (pentatricopeptide repeat-containing protein At5g01110 OS=Cucurbita moschata OX=3662 GN=LOC111441098 PE=4 SV=1)
HSP 1 Score: 1288.9 bits (3334), Expect = 0.0e+00
Identity = 650/755 (86.09%), Postives = 687/755 (90.99%), Query Frame = 0
Query: 1 MAAHPLPLPKSTFRTRILASTFTCAAPFLRTNSNSFRPHYIYSLPKFHSNTALGSLQTYG 60
MAAH LPLPK TFRTRI+AST T A P LR+NS SF H YSLPKFHS
Sbjct: 8 MAAHRLPLPKPTFRTRIIASTVTYATPLLRSNSISFTFHLFYSLPKFHSIHD-------E 67
Query: 61 APGPPNHDPV------SNSFLVEKILFSLKQNNVSSLSSSLFRLNPSSLVEILYRCRENL 120
A G NH PV SNSFLVEKILFSLKQNNVSSLS+SLFRLNPS+LVE+LY CRENL
Sbjct: 68 AAGSSNHGPVSSSVSASNSFLVEKILFSLKQNNVSSLSNSLFRLNPSALVEVLYGCRENL 127
Query: 121 HLGLKFIGLVSSNCPNFKHSSLSLSAMVHFLVRCRRLSEAQACILRMVRKSGVSRVEVVE 180
HLGLKFI LVSS+CPN KHSS+SLSAMVHFLVR RRLSEAQACILRMVRKSGVSRVEVV+
Sbjct: 128 HLGLKFIDLVSSSCPNLKHSSISLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVEVVQ 187
Query: 181 SLVSTCDNFGSIDLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVK 240
SLVSTC NFGSI LVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVK
Sbjct: 188 SLVSTCGNFGSIGLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVK 247
Query: 241 IGWVDLAWEIYGEAVRGGVELNVYTLNIMVNALCKDRKIESVNLFLSDMEKKGVFPDIVT 300
IGWVDLAWEI+GE VRGG ELNVYTLNIMVNALCKD +I +VNLFLSDMEKKGVFPDIVT
Sbjct: 248 IGWVDLAWEIFGEVVRGGTELNVYTLNIMVNALCKDGRIANVNLFLSDMEKKGVFPDIVT 307
Query: 301 YNTLISAYCREGLVEEAFQLLNSISGKGMKPGLLTYNAIINGLCKIGKYNRAKDILNEML 360
YNTLISAYCREGLVEEAF+LLNSIS KGM+PGLLTYNAIINGLCKIGKYNRAKD+LN+M
Sbjct: 308 YNTLISAYCREGLVEEAFELLNSISSKGMEPGLLTYNAIINGLCKIGKYNRAKDVLNKMS 367
Query: 361 QLGLRPDPATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDLVSFSSLIRVLARNRHLD 420
QLGL+PD ATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDL+SFSSLI VLARN LD
Sbjct: 368 QLGLKPDAATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDLISFSSLISVLARNGDLD 427
Query: 421 RAFMYFRDMKIIGLVPDNVIYAILIDGFCRIGAISDALKMRDEMLAQGCVMDVVVYNTIL 480
A YFR+MK IGLVPDNVIY ILIDGFCR GAISDALKMRDEMLAQGCV+DVV YNTIL
Sbjct: 428 LALTYFRNMKSIGLVPDNVIYTILIDGFCRNGAISDALKMRDEMLAQGCVVDVVAYNTIL 487
Query: 481 NGLCKKKLFVDADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDKALNLFGTMIRTNLK 540
NGLCKKK+ VDADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMD+ALNLFG M+RTNLK
Sbjct: 488 NGLCKKKMLVDADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDRALNLFGRMVRTNLK 547
Query: 541 PDIVTYNTLIDGFCKVGEMDRAKELWDDMIRKDILPNHISYGIVINGFCNSGLLSEALHL 600
PDIVTYNTLIDGFCKVG+M +AK+LWDDMIRKDI+PNH+SYG VINGFC+SG LSEALHL
Sbjct: 548 PDIVTYNTLIDGFCKVGDMKKAKDLWDDMIRKDIVPNHVSYGTVINGFCSSGYLSEALHL 607
Query: 601 CDQMVERGIKPNLVTYNTLIKGYCRSGDIPSAYECLSKMISNGIIPDGISYNTLIDGYLK 660
CDQMVERGIKPNLVTYNTLIKGYCRS D+ A+ECLSKMISNGIIPD ISYNTLIDGYLK
Sbjct: 608 CDQMVERGIKPNLVTYNTLIKGYCRSADMLKAHECLSKMISNGIIPDRISYNTLIDGYLK 667
Query: 661 EENLEKAFVLINEMEKQGLQLDVITYNVILNGFCAKGRMQEAEQVLRKMIENGIHPDRTT 720
+ENL KAFV+INEMEKQ L+LDVITYN+ILNG+CAKGRM EAEQVLRKMIENG++PDR T
Sbjct: 668 DENLGKAFVMINEMEKQRLKLDVITYNLILNGYCAKGRMLEAEQVLRKMIENGVNPDRAT 727
Query: 721 YSSLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF 750
YSSLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF
Sbjct: 728 YSSLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF 755
BLAST of Lcy03g008710 vs. ExPASy TrEMBL
Match:
A0A6J1DJZ9 (pentatricopeptide repeat-containing protein At5g01110 OS=Momordica charantia OX=3673 GN=LOC111020766 PE=4 SV=1)
HSP 1 Score: 1225.7 bits (3170), Expect = 0.0e+00
Identity = 619/753 (82.20%), Postives = 668/753 (88.71%), Query Frame = 0
Query: 1 MAAHPLPLPKSTFRTRILASTFTCAAPFLRTNS--NSFRPHYIYSLPKFHSNTALGSLQT 60
MAA+ LP TFR R LA TFT P LR + NS R H I+SL K H++
Sbjct: 6 MAANRLPHLNFTFRARTLALTFTDVEPLLRVRAYFNSLRLHSIFSLSKLHTD-------- 65
Query: 61 YGAPGPPNHDPV--SNSFLVEKILFSLKQNNVSSLSSSLFRLNPSSLVEILYRCRENLHL 120
PGP +H PV SNSFLVEKILF LKQNNVSSLS+SLF LN S LVE+L+ CREN+ L
Sbjct: 66 ---PGPSDHQPVSSSNSFLVEKILFGLKQNNVSSLSTSLFHLNASQLVEVLFSCRENVQL 125
Query: 121 GLKFIGLVSSNCPNFKHSSLSLSAMVHFLVRCRRLSEAQACILRMVRKSGVSRVEVVESL 180
G++FIGLVSSNCPNFKHSSLSLS M+HFLVR RLSEAQA ILRMVRKSGVSRVEVVESL
Sbjct: 126 GIRFIGLVSSNCPNFKHSSLSLSVMIHFLVRGGRLSEAQALILRMVRKSGVSRVEVVESL 185
Query: 181 VSTCDNFGSIDLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVKIG 240
VSTC++FGSI LV DLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVKIG
Sbjct: 186 VSTCNSFGSIPLVFDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVKIG 245
Query: 241 WVDLAWEIYGEAVRGGVELNVYTLNIMVNALCKDRKIESVNLFLSDMEKKGVFPDIVTYN 300
WVDLAWEIYGE VRGG++LN YTLNIMVNALCKDRKIE+VNLFLSDMEKKGVFPDIVTYN
Sbjct: 246 WVDLAWEIYGEVVRGGIKLNAYTLNIMVNALCKDRKIENVNLFLSDMEKKGVFPDIVTYN 305
Query: 301 TLISAYCREGLVEEAFQLLNSISGKGMKPGLLTYNAIINGLCKIGKYNRAKDILNEMLQL 360
TLISAYCREGLVEEAF+LLN +S KGM+PG+LTYNAIINGLCK GKY+ AK +LNEMLQL
Sbjct: 306 TLISAYCREGLVEEAFELLNLVSSKGMEPGILTYNAIINGLCKTGKYSSAKHVLNEMLQL 365
Query: 361 GLRPDPATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDLVSFSSLIRVLARNRHLDRA 420
GLRPD TYNTLLVE CRRD+I EA EIFDEMSRHGV DL+SFSS+I VL+RN HLDRA
Sbjct: 366 GLRPDTTTYNTLLVESCRRDDILEAREIFDEMSRHGVRHDLISFSSMIGVLSRNGHLDRA 425
Query: 421 FMYFRDMKIIGLVPDNVIYAILIDGFCRIGAISDALKMRDEMLAQGCVMDVVVYNTILNG 480
+ FRDMK +GLVPDNVIY ILIDGFCR GAISDALKMRDEMLAQGCVMDVV YNTILNG
Sbjct: 426 CLCFRDMKSVGLVPDNVIYTILIDGFCRNGAISDALKMRDEMLAQGCVMDVVAYNTILNG 485
Query: 481 LCKKKLFVDADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDKALNLFGTMIRTNLKPD 540
LCKKK++VDA+MLFNEMVERGVFPDFYTFTTLI+GYCKDGNMDKALNLFGTMI TNLKPD
Sbjct: 486 LCKKKMYVDAEMLFNEMVERGVFPDFYTFTTLINGYCKDGNMDKALNLFGTMIHTNLKPD 545
Query: 541 IVTYNTLIDGFCKVGEMDRAKELWDDMIRKDILPNHISYGIVINGFCNSGLLSEALHLCD 600
IVTYNTLIDGFCKVGE++RAKELWDDM RKDILPNHISYGIVINGFCNSG LSEAL LC+
Sbjct: 546 IVTYNTLIDGFCKVGEVERAKELWDDMTRKDILPNHISYGIVINGFCNSGHLSEALRLCE 605
Query: 601 QMVERGIKPNLVTYNTLIKGYCRSGDIPSAYECLSKMISNGIIPDGISYNTLIDGYLKEE 660
QMVE+GIK NL+T NTLIKG+CRSGD+ AY CLSKMISNGI PD ISYNTLIDGY+KE
Sbjct: 606 QMVEQGIKLNLITCNTLIKGHCRSGDMSKAYACLSKMISNGITPDSISYNTLIDGYVKEG 665
Query: 661 NLEKAFVLINEMEKQGLQLDVITYNVILNGFCAKGRMQEAEQVLRKMIENGIHPDRTTYS 720
N+EKA VL+NEMEKQG+QLDVITYN ILNGFCA+GRM+EAEQVLRKMIENGI+PDR T+S
Sbjct: 666 NVEKALVLVNEMEKQGIQLDVITYNEILNGFCAQGRMKEAEQVLRKMIENGINPDRATFS 725
Query: 721 SLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF 750
SLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF
Sbjct: 726 SLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF 747
BLAST of Lcy03g008710 vs. ExPASy TrEMBL
Match:
A0A1S3BNF5 (pentatricopeptide repeat-containing protein At5g01110 OS=Cucumis melo OX=3656 GN=LOC103491986 PE=4 SV=1)
HSP 1 Score: 1211.4 bits (3133), Expect = 0.0e+00
Identity = 615/755 (81.46%), Postives = 665/755 (88.08%), Query Frame = 0
Query: 1 MAAHPLPLPKSTFRTRILASTFTCAAPFLRTNSNSFRPHYIYSLPKFHSNTALGSLQTYG 60
MA H LPLPKSTFR+ IL+S FT + P L TN NSF+ H IYS SNTAL LQT
Sbjct: 1 MAVHRLPLPKSTFRSGILSSKFTSSTPLLPTNFNSFKLHTIYS----PSNTALRFLQTQS 60
Query: 61 APGPPNHDPV------SNSFLVEKILFSLKQNNVSSLSSSLFRLNPSSLVEILYRCRENL 120
PG P +DPV S+SFL+EKILFSLKQNNVS L SL RL+PS L+++L+RCRE+L
Sbjct: 61 TPG-PLYDPVSSSVSPSDSFLLEKILFSLKQNNVSYLRDSLLRLSPSLLLQVLFRCREDL 120
Query: 121 HLGLKFIGLVSSNCPNFKHSSLSLSAMVHFLVRCRRLSEAQACILRMVRKSGVSRVEVVE 180
HLGLKFIGLVS PNFKHSSLSLSAMVHFLVR RRLSEAQACILRMVRK GVSRV+VVE
Sbjct: 121 HLGLKFIGLVSYYFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKRGVSRVKVVE 180
Query: 181 SLVSTCDNFGSIDLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVK 240
SL+STC NFGSI LV DLLVRTYVQA+KLREGSEAF+ILR KGVSVSINACN LLGGLV+
Sbjct: 181 SLISTCFNFGSIGLVYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVR 240
Query: 241 IGWVDLAWEIYGEAVRGGVELNVYTLNIMVNALCKDRKIESVNLFLSDMEKKGVFPDIVT 300
GWVDLAWEIYGE VRGG+ELNVYTLNIMVNALCKDRK E+V FLSDME+KGVF DIVT
Sbjct: 241 TGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEEKGVFADIVT 300
Query: 301 YNTLISAYCREGLVEEAFQLLNSISGKGMKPGLLTYNAIINGLCKIGKYNRAKDILNEML 360
YNTLI AYCREGLVEEAFQLLNS S +GM+PG+LTYNAI+ GLCK+GKY+RAK +L EML
Sbjct: 301 YNTLIRAYCREGLVEEAFQLLNSFSSRGMEPGVLTYNAILVGLCKVGKYDRAKGVLIEML 360
Query: 361 QLGLRPDPATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDLVSFSSLIRVLARNRHLD 420
QLGL P+ ATYN LLVEICRRDNI EA+EIFDEMSRHGVLPDLVSFSSLI VLARN HL
Sbjct: 361 QLGLTPNAATYNILLVEICRRDNILEAQEIFDEMSRHGVLPDLVSFSSLIGVLARNGHLS 420
Query: 421 RAFMYFRDMKIIGLVPDNVIYAILIDGFCRIGAISDALKMRDEMLAQGCVMDVVVYNTIL 480
+A MYFR+M+ GLVPDNVIY ILIDGFCR GA+SDALKMRDEMLA+G MDVV YNT L
Sbjct: 421 QALMYFREMERSGLVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGFFMDVVTYNTFL 480
Query: 481 NGLCKKKLFVDADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDKALNLFGTMIRTNLK 540
NG CKKK+ DADMLF EMVERG+ PDFYTFTTLI GYCKDGNMDKALNLF TM+R+NLK
Sbjct: 481 NGFCKKKMLADADMLFKEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFETMVRSNLK 540
Query: 541 PDIVTYNTLIDGFCKVGEMDRAKELWDDMIRKDILPNHISYGIVINGFCNSGLLSEALHL 600
PDIVTYNTLIDGFCK GEM+RAKELWDDMIRKDILPNHISYGIVINGFC+SGLL +ALHL
Sbjct: 541 PDIVTYNTLIDGFCKAGEMERAKELWDDMIRKDILPNHISYGIVINGFCSSGLLPQALHL 600
Query: 601 CDQMVERGIKPNLVTYNTLIKGYCRSGDIPSAYECLSKMISNGIIPDGISYNTLIDGYLK 660
CDQMVE+GI+PNLVT NTLIKGYCRSGD+P AYE LSKMISNGIIPD ISYNTLIDGYLK
Sbjct: 601 CDQMVEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSISYNTLIDGYLK 660
Query: 661 EENLEKAFVLINEMEKQGLQLDVITYNVILNGFCAKGRMQEAEQVLRKMIENGIHPDRTT 720
EENLEKAFVLINEMEK+GLQL+VITYN ILNGFCA+GRMQEAE VLRKMIE GI+PDR T
Sbjct: 661 EENLEKAFVLINEMEKRGLQLNVITYNSILNGFCAEGRMQEAEHVLRKMIEIGINPDRAT 720
Query: 721 YSSLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF 750
YS LINGHVSQDNMK+AFRFHDEMLQRGLVPDDRF
Sbjct: 721 YSFLINGHVSQDNMKEAFRFHDEMLQRGLVPDDRF 750
BLAST of Lcy03g008710 vs. ExPASy TrEMBL
Match:
A0A660KP76 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_009846 PE=4 SV=1)
HSP 1 Score: 1038.9 bits (2685), Expect = 1.0e-299
Identity = 522/749 (69.69%), Postives = 611/749 (81.58%), Query Frame = 0
Query: 1 MAAHPLPLPKSTFRTRILASTFTCAAPFLRTNSNSFRPHYIYSLPKFHSNTALGSLQTYG 60
MA L PK T RT T P + S RPH + SLP N L +LQT G
Sbjct: 1 MATQRLLSPKPTLRT-----LTTITKPSFHDQACSHRPHSLSSLPNPDLNHGLRTLQT-G 60
Query: 61 APGPPNHDPVSNSFLVEKILFSLKQNNVSSLSSSLFRLNPSSLVEILYRCRENLHLGLKF 120
+ P+S+SFL+EKI+FSLKQ N + L + LFRLNP + E+L R RENL LG +F
Sbjct: 61 EEPASSTPPLSDSFLLEKIVFSLKQGNPNLLRNHLFRLNPLLVFEVLNRFRENLQLGQRF 120
Query: 121 IGLVSSNCPNFKHSSLSLSAMVHFLVRCRRLSEAQACILRMVRKSGVSRVEVVESLVSTC 180
I L+ NCPNFKHSS SLSA+VH LVR RR S+AQ+ ILRM+RKSGVSRVE+VESL S
Sbjct: 121 IDLIVLNCPNFKHSSQSLSAIVHVLVRSRRQSDAQSFILRMIRKSGVSRVEIVESLTSVG 180
Query: 181 DNFGSIDLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVKIGWVDL 240
DNFGS LV DLL+RTYVQARKLREGSEAFR LRSKG VSINACNSLLGGLVK+GWVDL
Sbjct: 181 DNFGSNSLVFDLLIRTYVQARKLREGSEAFRALRSKGFCVSINACNSLLGGLVKVGWVDL 240
Query: 241 AWEIYGEAVRGGVELNVYTLNIMVNALCKDRKIESVNLFLSDMEKKGVFPDIVTYNTLIS 300
AWE+YGE VR G++LNVYTLNIMVNALCKDRKI++V +FLSDME+KGVFPDIVTYNTLIS
Sbjct: 241 AWEVYGEVVRSGIDLNVYTLNIMVNALCKDRKIDNVRMFLSDMEEKGVFPDIVTYNTLIS 300
Query: 301 AYCREGLVEEAFQLLNSISGKGMKPGLLTYNAIINGLCKIGKYNRAKDILNEMLQLGLRP 360
YCREGL++EAF++LNS+SGKG+KPGL TYNAIINGLCK GKY RAK++L+EML G+ P
Sbjct: 301 GYCREGLLDEAFEILNSMSGKGLKPGLFTYNAIINGLCKKGKYGRAKEVLDEMLDNGVSP 360
Query: 361 DPATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDLVSFSSLIRVLARNRHLDRAFMYF 420
D ATYNTLLVE R DNI EAEEIF+EMS GV+PDLVSFSSLI V RN HLD+A ++F
Sbjct: 361 DTATYNTLLVESGRNDNILEAEEIFNEMSHRGVVPDLVSFSSLIGVFTRNGHLDQALVHF 420
Query: 421 RDMKIIGLVPDNVIYAILIDGFCRIGAISDALKMRDEMLAQGCVMDVVVYNTILNGLCKK 480
R+MK GLVPDNVIY ILIDG+CR G +S ALKMRDEML GC MDVV YNTILNGLC+
Sbjct: 421 RNMKKTGLVPDNVIYTILIDGYCRNGIMSGALKMRDEMLQHGCAMDVVTYNTILNGLCRG 480
Query: 481 KLFVDADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDKALNLFGTMIRTNLKPDIVTY 540
K+ DAD LFNEMVE+GVFPDF TFTTLI+GYCKD NM+KAL+LF TM + NLKPDIVTY
Sbjct: 481 KMLADADELFNEMVEKGVFPDFCTFTTLINGYCKDWNMNKALSLFETMTQRNLKPDIVTY 540
Query: 541 NTLIDGFCKVGEMDRAKELWDDMIRKDILPNHISYGIVINGFCNSGLLSEALHLCDQMVE 600
NTLIDGFCKVGEM++A+ELW DMI + I PNHISYGI+INGFC G LS+A L D+MVE
Sbjct: 541 NTLIDGFCKVGEMEKAEELWGDMISRGISPNHISYGILINGFCIMGYLSDAFRLWDEMVE 600
Query: 601 RGIKPNLVTYNTLIKGYCRSGDIPSAYECLSKMISNGIIPDGISYNTLIDGYLKEENLEK 660
+GI+P+LVT NT+IKGYCRSG++ A + LSKM+ G++PD I++NTLI+GY+KEE ++K
Sbjct: 601 KGIRPSLVTCNTIIKGYCRSGNVLEADDFLSKMMLKGVVPDSITFNTLINGYVKEEIMDK 660
Query: 661 AFVLINEMEKQGLQLDVITYNVILNGFCAKGRMQEAEQVLRKMIENGIHPDRTTYSSLIN 720
AFV IN+MEKQGL DVITYNV+LNGFC +GRM++AE +L+KMIE G++PDR TY+SLIN
Sbjct: 661 AFVSINKMEKQGLLPDVITYNVVLNGFCKQGRMKDAELLLQKMIEKGVNPDRFTYTSLIN 720
Query: 721 GHVSQDNMKDAFRFHDEMLQRGLVPDDRF 750
GHVSQDN+K+AFRFHDEMLQRG VPDD+F
Sbjct: 721 GHVSQDNLKEAFRFHDEMLQRGFVPDDKF 743
BLAST of Lcy03g008710 vs. NCBI nr
Match:
XP_038879208.1 (pentatricopeptide repeat-containing protein At5g01110 [Benincasa hispida] >XP_038879209.1 pentatricopeptide repeat-containing protein At5g01110 [Benincasa hispida])
HSP 1 Score: 1312.0 bits (3394), Expect = 0.0e+00
Identity = 662/755 (87.68%), Postives = 696/755 (92.19%), Query Frame = 0
Query: 1 MAAHPLPLPKSTFRTRILASTFTCAAPFLRTNSNSFRPHYIYSLPKFHSNTALGSLQTYG 60
MA H LPLPKSTFR+ +LASTF A P + H IYSLPKF SNT L SLQT+
Sbjct: 8 MAVHRLPLPKSTFRSGVLASTFASATPSV--------THTIYSLPKFRSNTPLRSLQTHI 67
Query: 61 APGPPNHDPV------SNSFLVEKILFSLKQNNVSSLSSSLFRLNPSSLVEILYRCRENL 120
P P+HDPV S+SFLV+KILF+LKQNNVS LS+SLFRLNPS L+E+L RCRENL
Sbjct: 68 TPELPHHDPVCSSFSPSDSFLVDKILFNLKQNNVSYLSNSLFRLNPSLLLEVLCRCRENL 127
Query: 121 HLGLKFIGLVSSNCPNFKHSSLSLSAMVHFLVRCRRLSEAQACILRMVRKSGVSRVEVVE 180
HLGLKFI LVSSNCPNFKHSSLSLSAMVHFLVR RRLSEAQACILRMVRKSGVSRVEVVE
Sbjct: 128 HLGLKFIDLVSSNCPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVEVVE 187
Query: 181 SLVSTCDNFGSIDLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVK 240
SL+ST NFGSI LVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVK
Sbjct: 188 SLISTSVNFGSIGLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVK 247
Query: 241 IGWVDLAWEIYGEAVRGGVELNVYTLNIMVNALCKDRKIESVNLFLSDMEKKGVFPDIVT 300
IGWVDLAWEIYGE VRGG+ELNVYTLNIMVNALCKDRKIE+VNLFLSDME+KGVFPDIVT
Sbjct: 248 IGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKIENVNLFLSDMEEKGVFPDIVT 307
Query: 301 YNTLISAYCREGLVEEAFQLLNSISGKGMKPGLLTYNAIINGLCKIGKYNRAKDILNEML 360
YNTLI+AYCREGLVEEAFQLLNSIS KGM+PGLLTYNAIINGLCKIGKY RAKD+LNEM+
Sbjct: 308 YNTLINAYCREGLVEEAFQLLNSISSKGMEPGLLTYNAIINGLCKIGKYERAKDVLNEMV 367
Query: 361 QLGLRPDPATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDLVSFSSLIRVLARNRHLD 420
QLGLRPD ATYNTLLVEICRRDNI EA+EIFD+MSRHGVLPDLVSFSSL+ VLARN HLD
Sbjct: 368 QLGLRPDAATYNTLLVEICRRDNILEAQEIFDKMSRHGVLPDLVSFSSLLGVLARNGHLD 427
Query: 421 RAFMYFRDMKIIGLVPDNVIYAILIDGFCRIGAISDALKMRDEMLAQGCVMDVVVYNTIL 480
+AFM+FR+MK IGLVPDNVIY ILIDGFCR GAISDALKMRDEMLAQGC MDVV YNTIL
Sbjct: 428 QAFMHFREMKSIGLVPDNVIYTILIDGFCRNGAISDALKMRDEMLAQGCFMDVVAYNTIL 487
Query: 481 NGLCKKKLFVDADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDKALNLFGTMIRTNLK 540
NGLCKKK+F DADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDKALNLFGTM+RTNLK
Sbjct: 488 NGLCKKKMFADADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDKALNLFGTMVRTNLK 547
Query: 541 PDIVTYNTLIDGFCKVGEMDRAKELWDDMIRKDILPNHISYGIVINGFCNSGLLSEALHL 600
PDIVTYNTLIDGFCKVG M+RAKELWDDMIRKDILPNHISYGIVINGFC+SG LSEA HL
Sbjct: 548 PDIVTYNTLIDGFCKVGGMERAKELWDDMIRKDILPNHISYGIVINGFCSSGHLSEAWHL 607
Query: 601 CDQMVERGIKPNLVTYNTLIKGYCRSGDIPSAYECLSKMISNGIIPDGISYNTLIDGYLK 660
CDQMVERGIKPNLVT NTLIKGYCRSGD+P AYE LS+MISNGIIPD ISYNTLIDGYLK
Sbjct: 608 CDQMVERGIKPNLVTCNTLIKGYCRSGDMPKAYEYLSQMISNGIIPDSISYNTLIDGYLK 667
Query: 661 EENLEKAFVLINEMEKQGLQLDVITYNVILNGFCAKGRMQEAEQVLRKMIENGIHPDRTT 720
E+NLEKAFVLINEMEKQGLQLDVITYNVILNGFCAKGRMQEAEQVL+KMIENGI+PDR T
Sbjct: 668 EDNLEKAFVLINEMEKQGLQLDVITYNVILNGFCAKGRMQEAEQVLKKMIENGINPDRAT 727
Query: 721 YSSLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF 750
YSSLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF
Sbjct: 728 YSSLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF 754
BLAST of Lcy03g008710 vs. NCBI nr
Match:
XP_022973817.1 (pentatricopeptide repeat-containing protein At5g01110 [Cucurbita maxima] >XP_022973822.1 pentatricopeptide repeat-containing protein At5g01110 [Cucurbita maxima])
HSP 1 Score: 1300.0 bits (3363), Expect = 0.0e+00
Identity = 655/755 (86.75%), Postives = 690/755 (91.39%), Query Frame = 0
Query: 1 MAAHPLPLPKSTFRTRILASTFTCAAPFLRTNSNSFRPHYIYSLPKFHSNTALGSLQTYG 60
MAAH LPLPK TFRTRILASTFT A P LR NS SF H IYSLPKFHS
Sbjct: 9 MAAHRLPLPKPTFRTRILASTFTYATPLLRANSISFTFHLIYSLPKFHSIHD-------E 68
Query: 61 APGPPNHDPV------SNSFLVEKILFSLKQNNVSSLSSSLFRLNPSSLVEILYRCRENL 120
A G NHDPV SNSFLVEKILFSLKQNNVSSLS+SLFRLNPS+LVE+LY CRENL
Sbjct: 69 ASGSSNHDPVSSSVSASNSFLVEKILFSLKQNNVSSLSNSLFRLNPSALVEVLYGCRENL 128
Query: 121 HLGLKFIGLVSSNCPNFKHSSLSLSAMVHFLVRCRRLSEAQACILRMVRKSGVSRVEVVE 180
HLGLKFI LVSS+CPN KHSS+SLSAMVHFLVR RRLSEAQACILRMVRKSGVSRVEVVE
Sbjct: 129 HLGLKFIDLVSSSCPNLKHSSISLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVEVVE 188
Query: 181 SLVSTCDNFGSIDLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVK 240
S+VSTC NFGSI LVSDLLVRTYVQARKLREGSEAFRIL+SKGVSVSINACNSLLGGLVK
Sbjct: 189 SIVSTCGNFGSIGLVSDLLVRTYVQARKLREGSEAFRILKSKGVSVSINACNSLLGGLVK 248
Query: 241 IGWVDLAWEIYGEAVRGGVELNVYTLNIMVNALCKDRKIESVNLFLSDMEKKGVFPDIVT 300
IGWVDLAWEI+GE VRGG ELNVYTLNIMVNALCKD +I +VNLFLSDMEKKGVFPDIVT
Sbjct: 249 IGWVDLAWEIFGEVVRGGTELNVYTLNIMVNALCKDGRIANVNLFLSDMEKKGVFPDIVT 308
Query: 301 YNTLISAYCREGLVEEAFQLLNSISGKGMKPGLLTYNAIINGLCKIGKYNRAKDILNEML 360
YNTLISAYCREG VEEAF+LLNSIS KGM+PGLLTYNAIINGLCKI KYNRAKD+LN+M
Sbjct: 309 YNTLISAYCREGFVEEAFELLNSISSKGMEPGLLTYNAIINGLCKIRKYNRAKDVLNQMS 368
Query: 361 QLGLRPDPATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDLVSFSSLIRVLARNRHLD 420
QLGL+PD ATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDL+SFSSLI VLARN +LD
Sbjct: 369 QLGLKPDAATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDLISFSSLISVLARNGNLD 428
Query: 421 RAFMYFRDMKIIGLVPDNVIYAILIDGFCRIGAISDALKMRDEMLAQGCVMDVVVYNTIL 480
A YFRDMK IGLVPDNVIY ILIDGFCR GAISDALKMRDEMLAQGCV+DVV YNTIL
Sbjct: 429 LALTYFRDMKNIGLVPDNVIYTILIDGFCRNGAISDALKMRDEMLAQGCVVDVVAYNTIL 488
Query: 481 NGLCKKKLFVDADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDKALNLFGTMIRTNLK 540
NGLCKKK+ VDADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMD+ALNLFGTM+RTNLK
Sbjct: 489 NGLCKKKMLVDADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDRALNLFGTMVRTNLK 548
Query: 541 PDIVTYNTLIDGFCKVGEMDRAKELWDDMIRKDILPNHISYGIVINGFCNSGLLSEALHL 600
PDIVTYNTLIDGFCKVG+M RAK+LWDDMIRKDI+PNH+SYG VINGFC+SG LSEALHL
Sbjct: 549 PDIVTYNTLIDGFCKVGDMKRAKDLWDDMIRKDIVPNHVSYGTVINGFCSSGYLSEALHL 608
Query: 601 CDQMVERGIKPNLVTYNTLIKGYCRSGDIPSAYECLSKMISNGIIPDGISYNTLIDGYLK 660
CDQMVERGIKPNLVTYNTLIKGYCRS D+ A+ECLSKMISNGIIPD ISYNTLIDGYLK
Sbjct: 609 CDQMVERGIKPNLVTYNTLIKGYCRSADMLKAHECLSKMISNGIIPDRISYNTLIDGYLK 668
Query: 661 EENLEKAFVLINEMEKQGLQLDVITYNVILNGFCAKGRMQEAEQVLRKMIENGIHPDRTT 720
+ENL KAFV+INEMEKQGL+LDVITYN+ILNG+CAKGRM EAEQVLRKMIENG++PDR T
Sbjct: 669 DENLGKAFVMINEMEKQGLKLDVITYNLILNGYCAKGRMLEAEQVLRKMIENGVNPDRAT 728
Query: 721 YSSLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF 750
YSSLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF
Sbjct: 729 YSSLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF 756
BLAST of Lcy03g008710 vs. NCBI nr
Match:
XP_023530884.1 (pentatricopeptide repeat-containing protein At5g01110 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1289.2 bits (3335), Expect = 0.0e+00
Identity = 647/755 (85.70%), Postives = 686/755 (90.86%), Query Frame = 0
Query: 1 MAAHPLPLPKSTFRTRILASTFTCAAPFLRTNSNSFRPHYIYSLPKFHSNTALGSLQTYG 60
MAAH LPLPK TFRTRILA TFT A P LR N SF H YSLPKFHS
Sbjct: 8 MAAHRLPLPKPTFRTRILAPTFTYATPLLRANFISFTFHLFYSLPKFHSIHD-------E 67
Query: 61 APGPPNHDPV------SNSFLVEKILFSLKQNNVSSLSSSLFRLNPSSLVEILYRCRENL 120
A G NHDPV SNSFLVEKILFSLKQNNVSSLS+SLFRLNPS+LVE+LY CRENL
Sbjct: 68 AAGSSNHDPVSSSVSASNSFLVEKILFSLKQNNVSSLSNSLFRLNPSALVEVLYGCRENL 127
Query: 121 HLGLKFIGLVSSNCPNFKHSSLSLSAMVHFLVRCRRLSEAQACILRMVRKSGVSRVEVVE 180
HLGLKFI L+SS+CPN KHSS+SLSAMVHFLVR RRLSEAQ CILRMVRKSGVSRVEVVE
Sbjct: 128 HLGLKFIDLISSSCPNLKHSSISLSAMVHFLVRGRRLSEAQVCILRMVRKSGVSRVEVVE 187
Query: 181 SLVSTCDNFGSIDLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVK 240
S+VSTC NFGSI LVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVK
Sbjct: 188 SIVSTCGNFGSIGLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVK 247
Query: 241 IGWVDLAWEIYGEAVRGGVELNVYTLNIMVNALCKDRKIESVNLFLSDMEKKGVFPDIVT 300
IGWVDLAWEI+GE VRGG ELNVYTLNIMVNALCKD +I +VNLFLSDMEKKGVFPDIVT
Sbjct: 248 IGWVDLAWEIFGEVVRGGTELNVYTLNIMVNALCKDGRIANVNLFLSDMEKKGVFPDIVT 307
Query: 301 YNTLISAYCREGLVEEAFQLLNSISGKGMKPGLLTYNAIINGLCKIGKYNRAKDILNEML 360
YNTLISAYCREGLVEEAF+LLNSIS KGM+PGLLTYNAIINGLCKIGKYNRAKD+LN+M
Sbjct: 308 YNTLISAYCREGLVEEAFELLNSISSKGMEPGLLTYNAIINGLCKIGKYNRAKDVLNQMS 367
Query: 361 QLGLRPDPATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDLVSFSSLIRVLARNRHLD 420
QLGL+PD ATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDL+SFSSLI VLARN LD
Sbjct: 368 QLGLKPDAATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDLISFSSLISVLARNGDLD 427
Query: 421 RAFMYFRDMKIIGLVPDNVIYAILIDGFCRIGAISDALKMRDEMLAQGCVMDVVVYNTIL 480
A YFR+MK IGLVPDNVIY ILIDGFCR GAISDALKMRDEMLAQGC++DVV YNTIL
Sbjct: 428 LALTYFRNMKSIGLVPDNVIYTILIDGFCRNGAISDALKMRDEMLAQGCLVDVVAYNTIL 487
Query: 481 NGLCKKKLFVDADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDKALNLFGTMIRTNLK 540
NGLCKKK+ VDADMLFNEM+ERGVFPDFYTFTTLIHGYCKDGNMD+ALNLFG M+RTNLK
Sbjct: 488 NGLCKKKMLVDADMLFNEMIERGVFPDFYTFTTLIHGYCKDGNMDRALNLFGRMVRTNLK 547
Query: 541 PDIVTYNTLIDGFCKVGEMDRAKELWDDMIRKDILPNHISYGIVINGFCNSGLLSEALHL 600
PDIVTYNTLIDGFCKVG+M +AK+LWDDMIRKDI+PNH+SYG VINGFC+SG LSEALHL
Sbjct: 548 PDIVTYNTLIDGFCKVGDMKKAKDLWDDMIRKDIVPNHVSYGTVINGFCSSGYLSEALHL 607
Query: 601 CDQMVERGIKPNLVTYNTLIKGYCRSGDIPSAYECLSKMISNGIIPDGISYNTLIDGYLK 660
CDQMVERGIKPNLVTYNTLIKGYCRS D+ A+ECLSKMISNGIIPD ISYNTLIDGYLK
Sbjct: 608 CDQMVERGIKPNLVTYNTLIKGYCRSADMLKAHECLSKMISNGIIPDRISYNTLIDGYLK 667
Query: 661 EENLEKAFVLINEMEKQGLQLDVITYNVILNGFCAKGRMQEAEQVLRKMIENGIHPDRTT 720
+ENL KAFV+INEMEKQGL+LDVITYN+ILNG+CA+GRM EAEQVLRKMIENG++PDR T
Sbjct: 668 DENLGKAFVMINEMEKQGLKLDVITYNLILNGYCAEGRMLEAEQVLRKMIENGVNPDRAT 727
Query: 721 YSSLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF 750
YSSLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF
Sbjct: 728 YSSLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF 755
BLAST of Lcy03g008710 vs. NCBI nr
Match:
XP_022933790.1 (pentatricopeptide repeat-containing protein At5g01110 [Cucurbita moschata])
HSP 1 Score: 1288.9 bits (3334), Expect = 0.0e+00
Identity = 650/755 (86.09%), Postives = 687/755 (90.99%), Query Frame = 0
Query: 1 MAAHPLPLPKSTFRTRILASTFTCAAPFLRTNSNSFRPHYIYSLPKFHSNTALGSLQTYG 60
MAAH LPLPK TFRTRI+AST T A P LR+NS SF H YSLPKFHS
Sbjct: 8 MAAHRLPLPKPTFRTRIIASTVTYATPLLRSNSISFTFHLFYSLPKFHSIHD-------E 67
Query: 61 APGPPNHDPV------SNSFLVEKILFSLKQNNVSSLSSSLFRLNPSSLVEILYRCRENL 120
A G NH PV SNSFLVEKILFSLKQNNVSSLS+SLFRLNPS+LVE+LY CRENL
Sbjct: 68 AAGSSNHGPVSSSVSASNSFLVEKILFSLKQNNVSSLSNSLFRLNPSALVEVLYGCRENL 127
Query: 121 HLGLKFIGLVSSNCPNFKHSSLSLSAMVHFLVRCRRLSEAQACILRMVRKSGVSRVEVVE 180
HLGLKFI LVSS+CPN KHSS+SLSAMVHFLVR RRLSEAQACILRMVRKSGVSRVEVV+
Sbjct: 128 HLGLKFIDLVSSSCPNLKHSSISLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVEVVQ 187
Query: 181 SLVSTCDNFGSIDLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVK 240
SLVSTC NFGSI LVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVK
Sbjct: 188 SLVSTCGNFGSIGLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVK 247
Query: 241 IGWVDLAWEIYGEAVRGGVELNVYTLNIMVNALCKDRKIESVNLFLSDMEKKGVFPDIVT 300
IGWVDLAWEI+GE VRGG ELNVYTLNIMVNALCKD +I +VNLFLSDMEKKGVFPDIVT
Sbjct: 248 IGWVDLAWEIFGEVVRGGTELNVYTLNIMVNALCKDGRIANVNLFLSDMEKKGVFPDIVT 307
Query: 301 YNTLISAYCREGLVEEAFQLLNSISGKGMKPGLLTYNAIINGLCKIGKYNRAKDILNEML 360
YNTLISAYCREGLVEEAF+LLNSIS KGM+PGLLTYNAIINGLCKIGKYNRAKD+LN+M
Sbjct: 308 YNTLISAYCREGLVEEAFELLNSISSKGMEPGLLTYNAIINGLCKIGKYNRAKDVLNKMS 367
Query: 361 QLGLRPDPATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDLVSFSSLIRVLARNRHLD 420
QLGL+PD ATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDL+SFSSLI VLARN LD
Sbjct: 368 QLGLKPDAATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDLISFSSLISVLARNGDLD 427
Query: 421 RAFMYFRDMKIIGLVPDNVIYAILIDGFCRIGAISDALKMRDEMLAQGCVMDVVVYNTIL 480
A YFR+MK IGLVPDNVIY ILIDGFCR GAISDALKMRDEMLAQGCV+DVV YNTIL
Sbjct: 428 LALTYFRNMKSIGLVPDNVIYTILIDGFCRNGAISDALKMRDEMLAQGCVVDVVAYNTIL 487
Query: 481 NGLCKKKLFVDADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDKALNLFGTMIRTNLK 540
NGLCKKK+ VDADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMD+ALNLFG M+RTNLK
Sbjct: 488 NGLCKKKMLVDADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDRALNLFGRMVRTNLK 547
Query: 541 PDIVTYNTLIDGFCKVGEMDRAKELWDDMIRKDILPNHISYGIVINGFCNSGLLSEALHL 600
PDIVTYNTLIDGFCKVG+M +AK+LWDDMIRKDI+PNH+SYG VINGFC+SG LSEALHL
Sbjct: 548 PDIVTYNTLIDGFCKVGDMKKAKDLWDDMIRKDIVPNHVSYGTVINGFCSSGYLSEALHL 607
Query: 601 CDQMVERGIKPNLVTYNTLIKGYCRSGDIPSAYECLSKMISNGIIPDGISYNTLIDGYLK 660
CDQMVERGIKPNLVTYNTLIKGYCRS D+ A+ECLSKMISNGIIPD ISYNTLIDGYLK
Sbjct: 608 CDQMVERGIKPNLVTYNTLIKGYCRSADMLKAHECLSKMISNGIIPDRISYNTLIDGYLK 667
Query: 661 EENLEKAFVLINEMEKQGLQLDVITYNVILNGFCAKGRMQEAEQVLRKMIENGIHPDRTT 720
+ENL KAFV+INEMEKQ L+LDVITYN+ILNG+CAKGRM EAEQVLRKMIENG++PDR T
Sbjct: 668 DENLGKAFVMINEMEKQRLKLDVITYNLILNGYCAKGRMLEAEQVLRKMIENGVNPDRAT 727
Query: 721 YSSLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF 750
YSSLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF
Sbjct: 728 YSSLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF 755
BLAST of Lcy03g008710 vs. NCBI nr
Match:
KAG6588214.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1286.6 bits (3328), Expect = 0.0e+00
Identity = 648/755 (85.83%), Postives = 686/755 (90.86%), Query Frame = 0
Query: 1 MAAHPLPLPKSTFRTRILASTFTCAAPFLRTNSNSFRPHYIYSLPKFHSNTALGSLQTYG 60
MAAH LPLPK TFRTRILASTF+ A P LR NS SF H YSLPKFHS
Sbjct: 8 MAAHRLPLPKPTFRTRILASTFSYATPLLRANSISFTFHLFYSLPKFHSIHD-------E 67
Query: 61 APGPPNHDPV------SNSFLVEKILFSLKQNNVSSLSSSLFRLNPSSLVEILYRCRENL 120
A G NH PV SNSFLVEKILFSLKQNNVSSLS+SLFRLNPS+LVE+LY CRENL
Sbjct: 68 AAGSSNHGPVSSSVSASNSFLVEKILFSLKQNNVSSLSNSLFRLNPSALVEVLYGCRENL 127
Query: 121 HLGLKFIGLVSSNCPNFKHSSLSLSAMVHFLVRCRRLSEAQACILRMVRKSGVSRVEVVE 180
HLGLKFI LVSS+CPN KHSS+SLSAMVHFLVR RRLSEAQACILRMVRKSGVSRVEVV+
Sbjct: 128 HLGLKFIDLVSSSCPNLKHSSISLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVEVVQ 187
Query: 181 SLVSTCDNFGSIDLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVK 240
SLVSTC NFGSI LVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVK
Sbjct: 188 SLVSTCGNFGSIGLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVK 247
Query: 241 IGWVDLAWEIYGEAVRGGVELNVYTLNIMVNALCKDRKIESVNLFLSDMEKKGVFPDIVT 300
IGWVDLAWEI+GE VRGG ELNVYTLNIMVNALCKD +I +VNLFLSDMEKKGVFPDIVT
Sbjct: 248 IGWVDLAWEIFGEVVRGGTELNVYTLNIMVNALCKDGRIANVNLFLSDMEKKGVFPDIVT 307
Query: 301 YNTLISAYCREGLVEEAFQLLNSISGKGMKPGLLTYNAIINGLCKIGKYNRAKDILNEML 360
YNTLIS YCREGLVEEAF+LLNSIS KGM+PGLLTYNAIINGLCKIGKYNRAKD+LN+M
Sbjct: 308 YNTLISTYCREGLVEEAFELLNSISSKGMEPGLLTYNAIINGLCKIGKYNRAKDVLNKMS 367
Query: 361 QLGLRPDPATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDLVSFSSLIRVLARNRHLD 420
QLGL+PD ATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDL+SFSSLI VLARN LD
Sbjct: 368 QLGLKPDAATYNTLLVEICRRDNISEAEEIFDEMSRHGVLPDLISFSSLISVLARNGDLD 427
Query: 421 RAFMYFRDMKIIGLVPDNVIYAILIDGFCRIGAISDALKMRDEMLAQGCVMDVVVYNTIL 480
A YFR+MK IGLVPDNVIY ILIDGFCR GAISDALKMRDEMLAQGCV+DVV YNTIL
Sbjct: 428 LALTYFRNMKSIGLVPDNVIYTILIDGFCRNGAISDALKMRDEMLAQGCVVDVVAYNTIL 487
Query: 481 NGLCKKKLFVDADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDKALNLFGTMIRTNLK 540
NGLCKKK+ VDADMLFNEMVERG+FPDFYTFTTLIHGYCKDGNMD+ALNLF TM+RTNLK
Sbjct: 488 NGLCKKKMLVDADMLFNEMVERGMFPDFYTFTTLIHGYCKDGNMDRALNLFRTMVRTNLK 547
Query: 541 PDIVTYNTLIDGFCKVGEMDRAKELWDDMIRKDILPNHISYGIVINGFCNSGLLSEALHL 600
PDIVTYNTLIDGFCKVG+M +AK+LWDDMIRKDI+PNH++YG VINGFC+SG L EALHL
Sbjct: 548 PDIVTYNTLIDGFCKVGDMKKAKDLWDDMIRKDIVPNHVTYGTVINGFCSSGYLFEALHL 607
Query: 601 CDQMVERGIKPNLVTYNTLIKGYCRSGDIPSAYECLSKMISNGIIPDGISYNTLIDGYLK 660
CDQMVERGIKPNLVTYNTLIKGYCRS D+ A+ECLSKMISNGIIPD ISYNTLIDGYLK
Sbjct: 608 CDQMVERGIKPNLVTYNTLIKGYCRSADMLKAHECLSKMISNGIIPDRISYNTLIDGYLK 667
Query: 661 EENLEKAFVLINEMEKQGLQLDVITYNVILNGFCAKGRMQEAEQVLRKMIENGIHPDRTT 720
+ENL KAFV+INEMEKQGL+LDVITYN+ILNG+CAKGRM EAEQVLRKMIENG++PDR T
Sbjct: 668 DENLGKAFVMINEMEKQGLKLDVITYNLILNGYCAKGRMLEAEQVLRKMIENGVNPDRAT 727
Query: 721 YSSLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF 750
YSSLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF
Sbjct: 728 YSSLINGHVSQDNMKDAFRFHDEMLQRGLVPDDRF 755
BLAST of Lcy03g008710 vs. TAIR 10
Match:
AT5G01110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 840.1 bits (2169), Expect = 1.4e-243
Identity = 405/682 (59.38%), Postives = 526/682 (77.13%), Query Frame = 0
Query: 70 VSNSFLVEKILFSLKQNNVSSLSSSLFRLNPSSLVEILYRCRENLHLGLKFIGLVSSNCP 129
VS+SFLVEKI FSLKQ N +++ + L RLNP ++VE+LYRCR +L LG +F+ + + P
Sbjct: 49 VSDSFLVEKICFSLKQGN-NNVRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFP 108
Query: 130 NFKHSSLSLSAMVHFLVRCRRLSEAQACILRMVRKSGVSRVEVVESLVSTCDNFGSIDLV 189
NFKH+SLSLSAM+H LVR RLS+AQ+C+LRM+R+SGVSR+E+V SL ST N GS D V
Sbjct: 109 NFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSV 168
Query: 190 SDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVKIGWVDLAWEIYGEAV 249
DLL+RTYVQARKLRE EAF +LRSKG +VSI+ACN+L+G LV+IGWV+LAW +Y E
Sbjct: 169 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 228
Query: 250 RGGVELNVYTLNIMVNALCKDRKIESVNLFLSDMEKKGVFPDIVTYNTLISAYCREGLVE 309
R GV +NVYTLNIMVNALCKD K+E V FLS +++KGV+PDIVTYNTLISAY +GL+E
Sbjct: 229 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 288
Query: 310 EAFQLLNSISGKGMKPGLLTYNAIINGLCKIGKYNRAKDILNEMLQLGLRPDPATYNTLL 369
EAF+L+N++ GKG PG+ TYN +INGLCK GKY RAK++ EML+ GL PD TY +LL
Sbjct: 289 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 348
Query: 370 VEICRRDNISEAEEIFDEMSRHGVLPDLVSFSSLIRVLARNRHLDRAFMYFRDMKIIGLV 429
+E C++ ++ E E++F +M V+PDLV FSS++ + R+ +LD+A MYF +K GL+
Sbjct: 349 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 408
Query: 430 PDNVIYAILIDGFCRIGAISDALKMRDEMLAQGCVMDVVVYNTILNGLCKKKLFVDADML 489
PDNVIY ILI G+CR G IS A+ +R+EML QGC MDVV YNTIL+GLCK+K+ +AD L
Sbjct: 409 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL 468
Query: 490 FNEMVERGVFPDFYTFTTLIHGYCKDGNMDKALNLFGTMIRTNLKPDIVTYNTLIDGFCK 549
FNEM ER +FPD YT T LI G+CK GN+ A+ LF M ++ D+VTYNTL+DGF K
Sbjct: 469 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 528
Query: 550 VGEMDRAKELWDDMIRKDILPNHISYGIVINGFCNSGLLSEALHLCDQMVERGIKPNLVT 609
VG++D AKE+W DM+ K+ILP ISY I++N C+ G L+EA + D+M+ + IKP ++
Sbjct: 529 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMI 588
Query: 610 YNTLIKGYCRSGDIPSAYECLSKMISNGIIPDGISYNTLIDGYLKEENLEKAFVLINEME 669
N++IKGYCRSG+ L KMIS G +PD ISYNTLI G+++EEN+ KAF L+ +ME
Sbjct: 589 CNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKME 648
Query: 670 KQ--GLQLDVITYNVILNGFCAKGRMQEAEQVLRKMIENGIHPDRTTYSSLINGHVSQDN 729
++ GL DV TYN IL+GFC + +M+EAE VLRKMIE G++PDR+TY+ +ING VSQDN
Sbjct: 649 EEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDN 708
Query: 730 MKDAFRFHDEMLQRGLVPDDRF 750
+ +AFR HDEMLQRG PDD+F
Sbjct: 709 LTEAFRIHDEMLQRGFSPDDKF 729
BLAST of Lcy03g008710 vs. TAIR 10
Match:
AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 370.9 bits (951), Expect = 2.4e-102
Identity = 215/695 (30.94%), Postives = 375/695 (53.96%), Query Frame = 0
Query: 43 SLPKFHSNTALGSLQTYG---------APGP---PNHDPVSNSFLVEKILFSLKQNNVSS 102
+L F + L SLQ+ G P P P V ++ V +I +K
Sbjct: 14 TLSSFRNFIQLFSLQSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEP 73
Query: 103 LSSSL----FRLNPSSLVEILYRCRENLHLGLKFIGLVSSNCPNFKHSSL-SLSAMVHFL 162
L SL + L+ +L + + + L L F S + S+L SL ++H
Sbjct: 74 LRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSR----RDSNLESLCIVIHLA 133
Query: 163 VRCRRLSEAQACILRMVRKSGV----SRVEVVESLVSTCDNFGSIDLVSDLLVRTYVQAR 222
V + L AQ+ I + + S V+ + LV T ++GS V D+ + V
Sbjct: 134 VASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFG 193
Query: 223 KLREGSEAFRILRSKGVSVSINACNSLLGGLVKIGW-VDLAWEIYGEAVRGGVELNVYTL 282
LRE F + + G+ +S+++CN L L K + A ++ E GV NV +
Sbjct: 194 LLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASY 253
Query: 283 NIMVNALCKDRKIESVNLFLSDMEKKGVFPDIVTYNTLISAYCREGLVEEAFQLLNSISG 342
NI+++ +C+ +I+ + L ME KG PD+++Y+T+++ YCR G +++ ++L+ +
Sbjct: 254 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 313
Query: 343 KGMKPGLLTYNAIINGLCKIGKYNRAKDILNEMLQLGLRPDPATYNTLLVEICRRDNISE 402
KG+KP Y +II LC+I K A++ +EM++ G+ PD Y TL+ C+R +I
Sbjct: 314 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 373
Query: 403 AEEIFDEMSRHGVLPDLVSFSSLIRVLARNRHLDRAFMYFRDMKIIGLVPDNVIYAILID 462
A + F EM + PD+++++++I + + A F +M GL PD+V + LI+
Sbjct: 374 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 433
Query: 463 GFCRIGAISDALKMRDEMLAQGCVMDVVVYNTILNGLCKKKLFVDADMLFNEMVERGVFP 522
G+C+ G + DA ++ + M+ GC +VV Y T+++GLCK+ A+ L +EM + G+ P
Sbjct: 434 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 493
Query: 523 DFYTFTTLIHGYCKDGNMDKALNLFGTMIRTNLKPDIVTYNTLIDGFCKVGEMDRAKELW 582
+ +T+ ++++G CK GN+++A+ L G L D VTY TL+D +CK GEMD+A+E+
Sbjct: 494 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 553
Query: 583 DDMIRKDILPNHISYGIVINGFCNSGLLSEALHLCDQMVERGIKPNLVTYNTLIKGYCRS 642
+M+ K + P +++ +++NGFC G+L + L + M+ +GI PN T+N+L+K YC
Sbjct: 554 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 613
Query: 643 GDIPSAYECLSKMISNGIIPDGISYNTLIDGYLKEENLEKAFVLINEMEKQGLQLDVITY 702
++ +A M S G+ PDG +Y L+ G+ K N+++A+ L EM+ +G + V TY
Sbjct: 614 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 673
Query: 703 NVILNGFCAKGRMQEAEQVLRKMIENGIHPDRTTY 716
+V++ GF + + EA +V +M G+ D+ +
Sbjct: 674 SVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
BLAST of Lcy03g008710 vs. TAIR 10
Match:
AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 370.9 bits (951), Expect = 2.4e-102
Identity = 215/695 (30.94%), Postives = 375/695 (53.96%), Query Frame = 0
Query: 43 SLPKFHSNTALGSLQTYG---------APGP---PNHDPVSNSFLVEKILFSLKQNNVSS 102
+L F + L SLQ+ G P P P V ++ V +I +K
Sbjct: 14 TLSSFRNFIQLFSLQSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEP 73
Query: 103 LSSSL----FRLNPSSLVEILYRCRENLHLGLKFIGLVSSNCPNFKHSSL-SLSAMVHFL 162
L SL + L+ +L + + + L L F S + S+L SL ++H
Sbjct: 74 LRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSR----RDSNLESLCIVIHLA 133
Query: 163 VRCRRLSEAQACILRMVRKSGV----SRVEVVESLVSTCDNFGSIDLVSDLLVRTYVQAR 222
V + L AQ+ I + + S V+ + LV T ++GS V D+ + V
Sbjct: 134 VASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFG 193
Query: 223 KLREGSEAFRILRSKGVSVSINACNSLLGGLVKIGW-VDLAWEIYGEAVRGGVELNVYTL 282
LRE F + + G+ +S+++CN L L K + A ++ E GV NV +
Sbjct: 194 LLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASY 253
Query: 283 NIMVNALCKDRKIESVNLFLSDMEKKGVFPDIVTYNTLISAYCREGLVEEAFQLLNSISG 342
NI+++ +C+ +I+ + L ME KG PD+++Y+T+++ YCR G +++ ++L+ +
Sbjct: 254 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 313
Query: 343 KGMKPGLLTYNAIINGLCKIGKYNRAKDILNEMLQLGLRPDPATYNTLLVEICRRDNISE 402
KG+KP Y +II LC+I K A++ +EM++ G+ PD Y TL+ C+R +I
Sbjct: 314 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 373
Query: 403 AEEIFDEMSRHGVLPDLVSFSSLIRVLARNRHLDRAFMYFRDMKIIGLVPDNVIYAILID 462
A + F EM + PD+++++++I + + A F +M GL PD+V + LI+
Sbjct: 374 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 433
Query: 463 GFCRIGAISDALKMRDEMLAQGCVMDVVVYNTILNGLCKKKLFVDADMLFNEMVERGVFP 522
G+C+ G + DA ++ + M+ GC +VV Y T+++GLCK+ A+ L +EM + G+ P
Sbjct: 434 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 493
Query: 523 DFYTFTTLIHGYCKDGNMDKALNLFGTMIRTNLKPDIVTYNTLIDGFCKVGEMDRAKELW 582
+ +T+ ++++G CK GN+++A+ L G L D VTY TL+D +CK GEMD+A+E+
Sbjct: 494 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 553
Query: 583 DDMIRKDILPNHISYGIVINGFCNSGLLSEALHLCDQMVERGIKPNLVTYNTLIKGYCRS 642
+M+ K + P +++ +++NGFC G+L + L + M+ +GI PN T+N+L+K YC
Sbjct: 554 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 613
Query: 643 GDIPSAYECLSKMISNGIIPDGISYNTLIDGYLKEENLEKAFVLINEMEKQGLQLDVITY 702
++ +A M S G+ PDG +Y L+ G+ K N+++A+ L EM+ +G + V TY
Sbjct: 614 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 673
Query: 703 NVILNGFCAKGRMQEAEQVLRKMIENGIHPDRTTY 716
+V++ GF + + EA +V +M G+ D+ +
Sbjct: 674 SVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
BLAST of Lcy03g008710 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 353.2 bits (905), Expect = 5.1e-97
Identity = 202/679 (29.75%), Postives = 356/679 (52.43%), Query Frame = 0
Query: 71 SNSFLVEKILFSLKQN--NVSSLSSSLFRLNPSSLVEILYRCRENLHLGLKFIGLVSSNC 130
S+S L +K L LK++ + LS++ P + +L + + + L LKF+ +
Sbjct: 20 SDSLLADKALTFLKRHPYQLHHLSAN---FTPEAASNLLLKSQNDQALILKFLNWAN--- 79
Query: 131 PNFKHSSLSLSAMVHFLVRCRRLSEAQACILRMVRKSGVSRVE--VVESLVSTCDNFGSI 190
P+ + +H L + + AQ + K+ V +SL T D S
Sbjct: 80 PHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYST 139
Query: 191 DLVSDLLVRTYVQARKLREGSEAFRILRSKGVSVSINACNSLLGGLVKIGW-VDLAWEIY 250
V DL+V++Y + + + + ++ G + + N++L ++ + A ++
Sbjct: 140 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 199
Query: 251 GEAVRGGVELNVYTLNIMVNALCKDRKIESVNLFLSDMEKKGVFPDIVTYNTLISAYCRE 310
E + V NV+T NI++ C I+ ME KG P++VTYNTLI YC+
Sbjct: 200 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 259
Query: 311 GLVEEAFQLLNSISGKGMKPGLLTYNAIINGLCKIGKYNRAKDILNEMLQLGLRPDPATY 370
+++ F+LL S++ KG++P L++YN +INGLC+ G+ +L EM + G D TY
Sbjct: 260 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 319
Query: 371 NTLLVEICRRDNISEAEEIFDEMSRHGVLPDLVSFSSLIRVLARNRHLDRAFMYFRDMKI 430
NTL+ C+ N +A + EM RHG+ P +++++SLI + + +++RA + M++
Sbjct: 320 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 379
Query: 431 IGLVPDNVIYAILIDGFCRIGAISDALKMRDEMLAQGCVMDVVVYNTILNGLCKKKLFVD 490
GL P+ Y L+DGF + G +++A ++ EM G VV YN ++NG C D
Sbjct: 380 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 439
Query: 491 ADMLFNEMVERGVFPDFYTFTTLIHGYCKDGNMDKALNLFGTMIRTNLKPDIVTYNTLID 550
A + +M E+G+ PD +++T++ G+C+ ++D+AL + M+ +KPD +TY++LI
Sbjct: 440 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 499
Query: 551 GFCKVGEMDRAKELWDDMIRKDILPNHISYGIVINGFCNSGLLSEALHLCDQMVERGIKP 610
GFC+ A +L+++M+R + P+ +Y +IN +C G L +AL L ++MVE+G+ P
Sbjct: 500 GFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLP 559
Query: 611 NLVTYNTLIKGYCRSGDIPSAYECLSKMISNGIIPDGISYNTLIDGYLKEENLEKAFVLI 670
++VTY+ LI G + A L K+ +P ++Y+TLI+ N+E V+
Sbjct: 560 DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC---SNIEFKSVV- 619
Query: 671 NEMEKQGLQLDVITYNVILNGFCAKGRMQEAEQVLRKMIENGIHPDRTTYSSLINGHVSQ 730
++ GFC KG M EA+QV M+ PD T Y+ +I+GH
Sbjct: 620 ----------------SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRA 672
Query: 731 DNMKDAFRFHDEMLQRGLV 745
+++ A+ + EM++ G +
Sbjct: 680 GDIRKAYTLYKEMVKSGFL 672
BLAST of Lcy03g008710 vs. TAIR 10
Match:
AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 343.2 bits (879), Expect = 5.3e-94
Identity = 204/665 (30.68%), Postives = 350/665 (52.63%), Query Frame = 0
Query: 90 SLSSSLF--RLNPSSLVEILYRCRENLHLGLKFIGLVSSNCPNFKHSSLSLSAMVHFLVR 149
+LSS L RL + EIL ++ LGL+F + + F HS+ S ++H LV+
Sbjct: 58 ALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLH-RGFDHSTASFCILIHALVK 117
Query: 150 CRRL----SEAQACILRMVRKSGVSRVEVVESLVSTCDNFGSIDLVSDLLVRTYVQARKL 209
S Q +LR ++ S V V+ S C S DLL++ YV++R++
Sbjct: 118 ANLFWPASSLLQTLLLRALKPSDV--FNVLFSCYEKCKLSSSSSF--DLLIQHYVRSRRV 177
Query: 210 REGSEAFRILRSK-GVSVSINACNSLLGGLVKIGWVDLAWEIYGEAVRGGVELNVYTLNI 269
+G F+++ +K + + ++LL GLVK LA E++ + V G+ +VY
Sbjct: 178 LDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTG 237
Query: 270 MVNALCKDRKIESVNLFLSDMEKKGVFPDIVTYNTLISAYCREGLVEEAFQLLNSISGKG 329
++ +LC+ + + ++ ME G +IV YN LI C++ V EA + ++GK
Sbjct: 238 VIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKD 297
Query: 330 MKPGLLTYNAIINGLCKIGKYNRAKDILNEMLQLGLRPDPATYNTLLVEICRRDNISEAE 389
+KP ++TY ++ GLCK+ ++ ++++EML L P A ++L+ + +R I EA
Sbjct: 298 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 357
Query: 390 EIFDEMSRHGVLPDLVSFSSLIRVLARNRHLDRAFMYFRDMKIIGLVPDNVIYAILIDGF 449
+ + GV P+L +++LI L + R A + F M IGL P++V Y+ILID F
Sbjct: 358 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 417
Query: 450 CRIGAISDALKMRDEMLAQGCVMDVVVYNTILNGLCKKKLFVDADMLFNEMVERGVFPDF 509
CR G + AL EM+ G + V YN+++NG CK A+ EM+ + + P
Sbjct: 418 CRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTV 477
Query: 510 YTFTTLIHGYCKDGNMDKALNLFGTMIRTNLKPDIVTYNTLIDGFCKVGEMDRAKELWDD 569
T+T+L+ GYC G ++KAL L+ M + P I T+ TL+ G + G + A +L+++
Sbjct: 478 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE 537
Query: 570 MIRKDILPNHISYGIVINGFCNSGLLSEALHLCDQMVERGIKPNLVTYNTLIKGYCRSGD 629
M ++ PN ++Y ++I G+C G +S+A +M E+GI P+ +Y LI G C +G
Sbjct: 538 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ 597
Query: 630 IPSAYECLSKMISNGIIPDGISYNTLIDGYLKEENLEKAFVLINEMEKQGLQLDVITYNV 689
A + + + I Y L+ G+ +E LE+A + EM ++G+ LD++ Y V
Sbjct: 598 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 657
Query: 690 ILNGFCAKGRMQEAEQVLRKMIENGIHPDRTTYSSLINGHVSQDNMKDAFRFHDEMLQRG 748
+++G + +L++M + G+ PD Y+S+I+ + K+AF D M+ G
Sbjct: 658 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 717
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9LFC5 | 1.9e-242 | 59.38 | Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX... | [more] |
| Q0WVK7 | 3.3e-101 | 30.94 | Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... | [more] |
| Q9FIX3 | 7.2e-96 | 29.75 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
| Q9FJE6 | 7.4e-93 | 30.68 | Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th... | [more] |
| Q9CA58 | 2.2e-92 | 32.52 | Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1I8K2 | 0.0e+00 | 86.75 | pentatricopeptide repeat-containing protein At5g01110 OS=Cucurbita maxima OX=366... | [more] |
| A0A6J1F5T7 | 0.0e+00 | 86.09 | pentatricopeptide repeat-containing protein At5g01110 OS=Cucurbita moschata OX=3... | [more] |
| A0A6J1DJZ9 | 0.0e+00 | 82.20 | pentatricopeptide repeat-containing protein At5g01110 OS=Momordica charantia OX=... | [more] |
| A0A1S3BNF5 | 0.0e+00 | 81.46 | pentatricopeptide repeat-containing protein At5g01110 OS=Cucumis melo OX=3656 GN... | [more] |
| A0A660KP76 | 1.0e-299 | 69.69 | Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_009846 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_038879208.1 | 0.0e+00 | 87.68 | pentatricopeptide repeat-containing protein At5g01110 [Benincasa hispida] >XP_03... | [more] |
| XP_022973817.1 | 0.0e+00 | 86.75 | pentatricopeptide repeat-containing protein At5g01110 [Cucurbita maxima] >XP_022... | [more] |
| XP_023530884.1 | 0.0e+00 | 85.70 | pentatricopeptide repeat-containing protein At5g01110 [Cucurbita pepo subsp. pep... | [more] |
| XP_022933790.1 | 0.0e+00 | 86.09 | pentatricopeptide repeat-containing protein At5g01110 [Cucurbita moschata] | [more] |
| KAG6588214.1 | 0.0e+00 | 85.83 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G01110.1 | 1.4e-243 | 59.38 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G05670.1 | 2.4e-102 | 30.94 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
| AT1G05670.2 | 2.4e-102 | 30.94 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
| AT5G39710.1 | 5.1e-97 | 29.75 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT5G59900.1 | 5.3e-94 | 30.68 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
