Lcy03g008690 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g008690
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr03: 41111548 .. 41114825 (+)
RNA-Seq Expression	Lcy03g008690
Synteny	Lcy03g008690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTGCTGTGGTCGGCAATCCGACACGAGCACGCGAGGGGGAGAAGAAAATAGAATCACGATTCACGACGACGACGCGACGGAGGTTTGGCTGTTGTTCACTGGTGGTGCGACGGAAAGGGCGACAGCCGGCACGACAGAGAGATGGGCGGAACGGCAGAGAGGGGCGGCGACTGACTCGCTAGTCTTGTGAGGGAGAAAGAAAGTCGAGGGTGAGATGAGAGGGGAGAAGAAAACGGGATGGGCTGGGGAGAATAAAAAATGAAATGGGCTAGGAGAATAAAAGATGAAAAATGAAATGGGCTGGGCTCATGCCTCACGCAACAGAAACTTTTTTTTTTTAATTACATTAGTCGGTCGGTTCAGTCGGTTCTCGACACTGTGAGAGAACCGACCGACCGACCAGTCAAGCAAAACCGACACCGACCGACTATATTAAAAAACCGACCGTCCAACGTCGGTTCGGTCGGTTTTGGTCGGTCGGATCGGTTTTTCGGTGTTTTTTGCTCATCCCTAGGCAATACTTTTGTCAACGGTAATAATTACTGTAAGCAATTCTCCCTTTTGCCAACTATTTTTTTAACGTCATCAAAAGTACTGTGTATAGTGAATGGGATGTTTGGATATTGTTTTCAAAATGTTTTCCAACTACAACAAAATTAAACCAATAATTAGTTTGACTTCAAGAATTTTAAGAAAATTAGTTTTTATTTATAACTAGTTTGTATCACTAGACCGTTTGCGTCTAATTATTTAAATAAATAAATAAATAATCAACTTGAACATAACCGCTTGTCCTCCTATGTTTTTTAAAGCAAAAATTATCTAAAATCATTTATTTCGATAATATTTTTATTAAACTTTTTCCTTTTCTTTTAGTATGCTTTTTTTTTTTTTTAGTACTTTTAGAAAATGTAAGTACACAAGTGATTCAAATCACAATTTTCCAAAACAAAAACAAAAACAGGAATTTTTCAAACATCCCTAAAATTAAAAACACTTTGTATAAAGATATTAGGTTTAGAATATTGAGATGCATGGAAAATTTTGAGTTATTTGAGGCAAATTGCCTGTCAAAAAGGGAATGGAGAGCTGAAGCTTTCAACCAAATTATAGAATATAAACCACTCAACCTTGAACAAGTTTTTCCCTTGTTAATTCATTAATTATAATAAGTATTAAGACTTAAGCCCAATGAGAAAGAACCAAGATGGATTTAGCTATTTCAATAACTTTTTTTTTTAATTTTTGAGAAGATCCTTAAATTAGTTCAAGTAGGCCTTAGTTTATAATATTTTGGTGTTTTGTTCTTCTCTTTCTAGAAAAATAAATACTTCTACTAACCACATTCTTGTTCCTTGTTGAAATTTTATCCTAAAGTTAAAAGAATAATAATAATAAAGTATTTAACATATTATTTTATTTAAAAAAAAAACTAAAAAAATATTTTTTTAATAAAAAATTAATGTTGCGTCGGCAATCTGTTAGTAATTAATGGAAAATTAGATAGAGAGACTGAGAGTGTAACGAAATCCAAATCTCAGAAATAAAATTGTTGAGTTTGAAAACTCAATGATCAAAAGGCAGTTTTCAAAAGGCAACCTATCTCAAACCTCACGGACCAAAAATGTACTTTTCCCTTTATTTAAACAATATATAATTGATGACGATGACAATATTTCATCAAAGAGTTTTGAGCTTAAACTTATCGGCATCTAATTTCAAATTATTAATGTTTTGTAGGTCGAGCTGGAGAGAGTGCCAAACAATCAAGGAGATCTTCAGACGATATGAAAAAGTCTCGGGGCAGGCCATAAACTTGGATAAATCCATGTTTATGGTGAGCAAAAATGTGCATGCGAGGGATGCTCAGAGTATTGGGGAGGTTTTAGGGATAAAACAAACTAAGTCTTTGGGCACATACCTTGGAATGCCATCGCAAAGTGGAAGGCGTAAAGCTACACTGTTCGGGAAGATAAAAGGCAAAATAGAAGGTCTATTGCAAGGATGAAATGAGAGGCTTTTCTCCTCGGGGGGAAAGGAAATTCTTTTGAAGGCGGTTTTTTAAGCGGTCCCTACGTATACAATGAGTTGCTTCAAAATTCCTAAAGGAATTTGTGAAGAGATCAATAAGCTCTACGCGAAATTCTAGTGGGGATCAATTGGTAATAGGAAAAGGATCCATTGGACAAAATGGGATAAGCCATGCAAGAGCAAAAGAGAGGGAGGACTAGGCTTTAAGGACATCCATCTGTTCAATCGAGCCCTTTTAGCCAAACAAGGCTGGAGAATATTAAGAGCCCCTGAAAGCTTACTGTTCCAAGTGCTGAGAGGTTGTTATTTTAGAACAGGTGACTTCTTTCAAGCACCGATAGGAAATAACTCATCCCTAACTTGGAAAAGCATAGTGTGGGGCAGATACCTTTTTAAAGAAGGCTATAGATGGAGAGTGGGAGATGGGAATCATATATACATAACGGAGGATCCTTGGCTAAGTAGGACAAGAAACGGGTTCCCTTGTGCGGTTAATGAAGCTCTGAAAGGGAAAAGAGTCGGCACCTTGATCAAGAGCAATGGAGAATGGGATGAGGAGTTAATTAGAAGGAATTTTTTGTCTATGGAGGCGGAAGATATCTTAGCCACCCCCTTGGGAAACCCCCCTACAAAAGATGAGATAATTTGGGCCTTAGACTCTAAAGGAGTCTTCAAGGTCAAAAGCGCATACCTTTTGGCCACTAATATCCAAAGAGCCAAAGAAGCATCTAGTTCGGGAGAGAAATTTCAGTGTTTCTGGGGTAGCATCTGGAGCCTAAACATTTTACCAAGAGCTAAGATTGGCCTATGTAACATAGTGAAAAACTTCATCCCCACAAAATGTAATCTAATTTCAAAAGGACTTGATATTAATCCAATTTGCTCTGTTTGCAGGAAGGCTAGGGAAGATGCGGCTCATGCTATTTGGAACTGTAAAGAGGTGAGAATGATATGGGAATATTTTTTCCCTAATCTAATTAATAGTTCTCTAACTTTCAGGGGGAAAGAAGCGATGGAGAATTGGTGGGAATGGATCTCGAGCAATCTCAACTCAAAAGAAAGAGAGACAGTGGTGATTATCAGCTGGTCCATTTGGATATTCAGGAATCAAATTACTATGAACAAGGTGAAATCAGACCCCAACAATTTAATCAGGCAGATCAGGAGAAGTATTTTAGAACAGAGAAGAAGTTCAGACAAGAACCTGAAATCGATCAGCGGGGAGAACCGTGTGAATCATGA

mRNA sequence

ATGGGTTGCTGTGGTCGGCAATCCGACACGAGCACGCGAGGGGGAGAAGAAAATAGAATCACGATTCACGACGACGACGCGACGGAGGTTTGGCTGTTGTTCACTGGTGGTGCGACGGAAAGGGCGACAGCCGGCACGACAGAGAGATGGGCGGAACGGCAGAGAGGGGCGGCGACTGACTCGCTAGGGGAAAGAAGCGATGGAGAATTGGTGGGAATGGATCTCGAGCAATCTCAACTCAAAAGAAAGAGAGACAGTGGTGATTATCAGCTGGTCCATTTGGATATTCAGGAATCAAATTACTATGAACAAGGTGAAATCAGACCCCAACAATTTAATCAGGCAGATCAGGAGAAGTATTTTAGAACAGAGAAGAAGTTCAGACAAGAACCTGAAATCGATCAGCGGGGAGAACCGTGTGAATCATGA

Coding sequence (CDS)

ATGGGTTGCTGTGGTCGGCAATCCGACACGAGCACGCGAGGGGGAGAAGAAAATAGAATCACGATTCACGACGACGACGCGACGGAGGTTTGGCTGTTGTTCACTGGTGGTGCGACGGAAAGGGCGACAGCCGGCACGACAGAGAGATGGGCGGAACGGCAGAGAGGGGCGGCGACTGACTCGCTAGGGGAAAGAAGCGATGGAGAATTGGTGGGAATGGATCTCGAGCAATCTCAACTCAAAAGAAAGAGAGACAGTGGTGATTATCAGCTGGTCCATTTGGATATTCAGGAATCAAATTACTATGAACAAGGTGAAATCAGACCCCAACAATTTAATCAGGCAGATCAGGAGAAGTATTTTAGAACAGAGAAGAAGTTCAGACAAGAACCTGAAATCGATCAGCGGGGAGAACCGTGTGAATCATGA

Protein sequence

MGCCGRQSDTSTRGGEENRITIHDDDATEVWLLFTGGATERATAGTTERWAERQRGAATDSLGERSDGELVGMDLEQSQLKRKRDSGDYQLVHLDIQESNYYEQGEIRPQQFNQADQEKYFRTEKKFRQEPEIDQRGEPCES

Homology

The following BLAST results are available for this feature:

BLAST of Lcy03g008690 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy03g008690 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy03g008690 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy03g008690 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g008690.1	Lcy03g008690.1	mRNA