Lcy03g007200 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g007200
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Protein FAR1-RELATED SEQUENCE 4-like
Location	Chr03: 36799744 .. 36801486 (+)
RNA-Seq Expression	Lcy03g007200
Synteny	Lcy03g007200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGGACATCAAATTACGATTTTGTTCGGTGGTGTTTGGGACGTGGCGAGACTCTACAATGATTTCAAGTCTAGTGTTGTGACGTGTCCTTGTGATGCTAACCTCTCTCAACTCAAGGTATGTGCTGTGAGCTACCTCAATTTGGCTGACAGTAATAGTATATGTCGGTTGACGCTCTTTAGGAACTGGTCAAACAACCCGATAAATGTAGTCCTTTAAGAAGATAGAGATGTTTTTTGGATGGTAAACGGGTTTCCGAATGACACGTACAGGGATTGTTGTGTAGTTGTGGACGTGCAGGGGGTAGATACTGCTATACACAACGGGGGCAGTCGCAAGCTCATCCTGGGGGAGACAAATTTTGAGTTTGTTAACTCAGATGGGATTGACGCGTTGATCGACATAGTACCTGTATCCAAGGGGTGGGTATTTTCGTGCAAAAAACATCTCAAGAAGGTAGTCTCTTTACTAGCCTTTAAAGGGAGTTTCCAATTCAAGACAATTAAATCCAATAGTAAGCAGTATACAGTGGCATGCATAGACGACTCATGCCCATGGTATACATGCGCTTCTACCTATCGCACGGGGCAGTTGTGGATTGTGAGGAAGTTTATCAACGAACACACTTGTTCTTTTGATGTCGTTCAGAATGATCACAGGGAAGCGATAGCGAGTGTTGCGTGCGAGTATGCGAAGACTATAATGAGGATCACTACCTGGATGCACTGTACACCTCGAGACATAATAGAGTATGCTGGGAAAACACACGGGATTAATATTAGTTATGACAAAGCATGGAGGGGTAGAGAAAAGGTGTTAAATGAGTTGAGAGGATCTCCTGAAGAGTCTTGTGCACAAATTCCAGCGTTTGCAGCTAGGTTGATCGAAAGAAATCCAGGTATTTACCATTTGTATTTACAGTTTATAACATTTTGTATTTAGTATATAATAATATTTACTATCGACATTTTTCAGGTACGTACACCGCCCAAAAAGTTGATTCAAATGACAGGTTCGAATTCTTCTTCATGAGTATTGCAACATCCATAGACGGGTGGAAACACTGTCTCCCGGTTATTCCTATAGATGGTACATCTTTGAAGAATAAATTCAATGGCACCCTTTTGATGGCCTGCACATTTGATGGTAGCTCAAAGATATTTCCGCTGGCTTTTTCTATTGTAGATTCTGAAAATGACGTGTCATGGGAGTGGTTTTTCAAGAACTTAAAAGCAACATTTGGAGAACCGAATGAGTTAGTAATAGTGTCTGACAGGCACAAGAGCATTGGTAAAGGTGTTTGGAAGGTATATACATCAGCACATCATGGTGTATGTATTTATCATCTTTTAAGGAACATTAAAGAAAATCACAAAGCAAAGGCCATTGATGATCTTTTTTATAAGTGTGTTAAATCGTATACTATCAGGGATTTTGAATATTACATGAGGCAGATGGAAACAAATCATTCCTTCTATTAGGGGTGAGCTTGAGGCGGTAGGGTATGCGCGGTGGACTCGTGCATTTTCCACGAGCAAACAGTATGTGTTGATGACCACTAATATTTCGGAGAGCTTAAATGCTTATTTAAGAGAGGCTCGTGAATTACCTATCATTCCGTTGTTGGAGTTTATAAGAGATTTTTTACAACGATGGTTCTACGAGAGGAGGAACCATGCAAGCATTCAGAGGTCTACCATTACAACATATGCAGCTGAAGAAGTACGTGAGACACTATAA

mRNA sequence

ATGGCGGGACATCAAATTACGATTTTGTTCGGTGGTGTTTGGGACGTGGCGAGACTCTACAATGATTTCAAGTCTAGTGTTGTGACGTGTCCTTGTGATGCTAACCTCTCTCAACTCAAGGGGGTAGATACTGCTATACACAACGGGGGCAGTCGCAAGCTCATCCTGGGGGAGACAAATTTTGAGTTTGTTAACTCAGATGGGATTGACGCGTTGATCGACATAGTACCTGTATCCAAGGGGTGGGTATTTTCGTGCAAAAAACATCTCAAGAAGGTAGTCTCTTTACTAGCCTTTAAAGGGAGTTTCCAATTCAAGACAATTAAATCCAATAGTAAGCAGTATACAGTGGCATGCATAGACGACTCATGCCCATGGTATACATGCGCTTCTACCTATCGCACGGGGCAGTTGTGGATTGTGAGGAAGTTTATCAACGAACACACTTGTTCTTTTGATGTCGTTCAGAATGATCACAGGGAAGCGATAGCGAGTGTTGCGTGCGAGTATGCGAAGACTATAATGAGGATCACTACCTGGATGCACTGTACACCTCGAGACATAATAGAGTATGCTGGGAAAACACACGGGATTAATATTAGTTATGACAAAGCATGGAGGGGTAGAGAAAAGGTGTTAAATGAGTTGAGAGGATCTCCTGAAGAGTCTTGTGCACAAATTCCAGCGTTTGCAGCTAGGTTGATCGAAAGAAATCCAGGTACGTACACCGCCCAAAAAGTTGATTCAAATGACAGGTTCGAATTCTTCTTCATGAGTATTGCAACATCCATAGACGGGTGGAAACACTGTCTCCCGGTTATTCCTATAGATGGTACATCTTTGAAGAATAAATTCAATGGCACCCTTTTGATGGCCTGCACATTTGATGGTAGCTCAAAGATATTTCCGCTGGCTTTTTCTATTGTAGATTCTGAAAATGACGTGTCATGGGAGTGGTTTTTCAAGAACTTAAAAGCAACATTTGGAGAACCGAATGAGTTAGTAATAGTGTCTGACAGGCACAAGAGCATTGGTAAAGGTGTTTGGAAGTATGTGTTGATGACCACTAATATTTCGGAGAGCTTAAATGCTTATTTAAGAGAGGCTCGTGAATTACCTATCATTCCGTTGTTGGAGTTTATAAGAGATTTTTTACAACGATGGTTCTACGAGAGGAGGAACCATGCAAGCATTCAGAGGTCTACCATTACAACATATGCAGCTGAAGAAGTACGTGAGACACTATAA

Coding sequence (CDS)

ATGGCGGGACATCAAATTACGATTTTGTTCGGTGGTGTTTGGGACGTGGCGAGACTCTACAATGATTTCAAGTCTAGTGTTGTGACGTGTCCTTGTGATGCTAACCTCTCTCAACTCAAGGGGGTAGATACTGCTATACACAACGGGGGCAGTCGCAAGCTCATCCTGGGGGAGACAAATTTTGAGTTTGTTAACTCAGATGGGATTGACGCGTTGATCGACATAGTACCTGTATCCAAGGGGTGGGTATTTTCGTGCAAAAAACATCTCAAGAAGGTAGTCTCTTTACTAGCCTTTAAAGGGAGTTTCCAATTCAAGACAATTAAATCCAATAGTAAGCAGTATACAGTGGCATGCATAGACGACTCATGCCCATGGTATACATGCGCTTCTACCTATCGCACGGGGCAGTTGTGGATTGTGAGGAAGTTTATCAACGAACACACTTGTTCTTTTGATGTCGTTCAGAATGATCACAGGGAAGCGATAGCGAGTGTTGCGTGCGAGTATGCGAAGACTATAATGAGGATCACTACCTGGATGCACTGTACACCTCGAGACATAATAGAGTATGCTGGGAAAACACACGGGATTAATATTAGTTATGACAAAGCATGGAGGGGTAGAGAAAAGGTGTTAAATGAGTTGAGAGGATCTCCTGAAGAGTCTTGTGCACAAATTCCAGCGTTTGCAGCTAGGTTGATCGAAAGAAATCCAGGTACGTACACCGCCCAAAAAGTTGATTCAAATGACAGGTTCGAATTCTTCTTCATGAGTATTGCAACATCCATAGACGGGTGGAAACACTGTCTCCCGGTTATTCCTATAGATGGTACATCTTTGAAGAATAAATTCAATGGCACCCTTTTGATGGCCTGCACATTTGATGGTAGCTCAAAGATATTTCCGCTGGCTTTTTCTATTGTAGATTCTGAAAATGACGTGTCATGGGAGTGGTTTTTCAAGAACTTAAAAGCAACATTTGGAGAACCGAATGAGTTAGTAATAGTGTCTGACAGGCACAAGAGCATTGGTAAAGGTGTTTGGAAGTATGTGTTGATGACCACTAATATTTCGGAGAGCTTAAATGCTTATTTAAGAGAGGCTCGTGAATTACCTATCATTCCGTTGTTGGAGTTTATAAGAGATTTTTTACAACGATGGTTCTACGAGAGGAGGAACCATGCAAGCATTCAGAGGTCTACCATTACAACATATGCAGCTGAAGAAGTACGTGAGACACTATAA

Protein sequence

MAGHQITILFGGVWDVARLYNDFKSSVVTCPCDANLSQLKGVDTAIHNGGSRKLILGETNFEFVNSDGIDALIDIVPVSKGWVFSCKKHLKKVVSLLAFKGSFQFKTIKSNSKQYTVACIDDSCPWYTCASTYRTGQLWIVRKFINEHTCSFDVVQNDHREAIASVACEYAKTIMRITTWMHCTPRDIIEYAGKTHGINISYDKAWRGREKVLNELRGSPEESCAQIPAFAARLIERNPGTYTAQKVDSNDRFEFFFMSIATSIDGWKHCLPVIPIDGTSLKNKFNGTLLMACTFDGSSKIFPLAFSIVDSENDVSWEWFFKNLKATFGEPNELVIVSDRHKSIGKGVWKYVLMTTNISESLNAYLREARELPIIPLLEFIRDFLQRWFYERRNHASIQRSTITTYAAEEVRETL

Homology

[Close]

BLAST of Lcy03g007200 vs. ExPASy TrEMBL
Match: A0A5D3E198 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G001100 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 2.9e-97
Identity = 180/419 (42.96%), Postives = 244/419 (58.23%), Query Frame = 0


Query: 75  IVPVSKGWVFSCKKHLKKVVSLLAFKGSFQFKTIKSNSKQYTVACIDDSCPWYTCASTYR 134
           ++ +  G +F  K  LKK + +LA   SF+  T++SN   + + C D SCPWY  AS ++
Sbjct: 58  VIHIRVGSMFRQKSVLKKAIYMLALNSSFELVTVRSNRTSFDIRCKDPSCPWYLRASVFK 117

Query: 135 TGQLWIVRKFINEHTCSFDVVQNDHREAIASVACEYAKTIMRITTWMHCTPRDIIEYAGK 194
              +WIVRKF + H CS DVV+NDH++A + +  E  K I +      C P D+I Y   
Sbjct: 118 KSDIWIVRKFTDTHLCSVDVVKNDHKQATSWIVSECTKLIFKTNDKAPCRPSDVINYMKI 177

Query: 195 THGINISYDKAWRGREKVLNELRGSPEESCAQIPAFAARLIERNPGTYTAQKVDSNDRFE 254
            HG+NISYDKAWRGRE  LN +RG+PE+S A + AF+  LI  NPGTYTA++ D   RF+
Sbjct: 178 HHGVNISYDKAWRGREIALNSIRGTPEDSYAMLSAFSDALIRNNPGTYTAEEADDEGRFK 237

Query: 255 FFFMSIATSIDGWKHCLPVIPIDGTSLKNKFNGTLLMACTFDGSSKIFPLAFSIVDSEND 314
           F+FM++A SID W +C+PVI +DG ++KNK+ GTL+ ACT DG+S+I PLAF++VDSEND
Sbjct: 238 FYFMALAASIDAWNYCVPVISVDGAAMKNKYLGTLISACTIDGNSQIVPLAFAVVDSEND 297

Query: 315 VSWEWFFKNLKATFGEPNELVIVSDRHKSI------------------------------ 374
           +SW WFF+NLKA FGE NE+VIVSD HKSI                              
Sbjct: 298 LSWSWFFRNLKAVFGEHNEMVIVSDAHKSIENGFNAVYEIAEHGLCAFHLLKNLKKNHKS 357

Query: 375 ----------------------------------------GKGVW--------KYVLMTT 416
                                                   G+  W        +Y ++TT
Sbjct: 358 LPMEDSFNKCARAYTPLEFEYYMRQLEQLSPSMRHELEAVGRHKWARAFFRRKRYQVITT 417

[Close]

BLAST of Lcy03g007200 vs. ExPASy TrEMBL
Match: A0A1S3C300 (uncharacterized protein LOC103495899 OS=Cucumis melo OX=3656 GN=LOC103495899 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 1.1e-93
Identity = 175/419 (41.77%), Postives = 241/419 (57.52%), Query Frame = 0


Query: 75  IVPVSKGWVFSCKKHLKKVVSLLAFKGSFQFKTIKSNSKQYTVACIDDSCPWYTCASTYR 134
           ++ +  G +F  K  LKK + +LA   SF+  T++SN   + + C D SCPWY  AS ++
Sbjct: 133 VIHIRVGSMFRQKSVLKKAIYMLALNSSFELVTVRSNRTSFDIRCKDPSCPWYLRASVFK 192

Query: 135 TGQLWIVRKFINEHTCSFDVVQNDHREAIASVACEYAKTIMRITTWMHCTPRDIIEYAGK 194
              +WIVRKFI  H CS DVV+NDH++A + +  E  K I +    + C P D+I Y   
Sbjct: 193 RSDIWIVRKFIYTHMCSVDVVKNDHKQATSWIVSECTKLIFKTNDKVPCRPSDVINYMKI 252

Query: 195 THGINISYDKAWRGREKVLNELRGSPEESCAQIPAFAARLIERNPGTYTAQKVDSNDRFE 254
            H +NISYDKAW GRE  LN +RG+PE+S A + AF+  LI  NPGTYTA++ D   RF+
Sbjct: 253 HHSVNISYDKAWGGREIALNSIRGTPEDSYAMLSAFSDALIRNNPGTYTAEEADDEGRFK 312

Query: 255 FFFMSIATSIDGWKHCLPVIPIDGTSLKNKFNGTLLMACTFDGSSKIFPLAFSIVDSEND 314
           F+FM++A SID W +C+PVI +DG ++KNK+ GTL+  CT DG+S+I PL F++VDSEND
Sbjct: 313 FYFMALAASIDAWNYCVPVISVDGAAMKNKYLGTLISTCTIDGNSQIVPLPFAVVDSEND 372

Query: 315 VSWEWFFKNLKATFGEPNELVIVSDRHKSI------------------------------ 374
           +SW WFF+NLKA FGE NE++IVSD +KSI                              
Sbjct: 373 LSWSWFFRNLKAVFGEHNEMLIVSDAYKSIENGFNAVYEIAEHGLCAFHLLKNLKKNHKS 432

Query: 375 ----------------------------------------GKGVW--------KYVLMTT 416
                                                   G+  W        +Y ++TT
Sbjct: 433 LPMEDSFNKCARTYTLLEFEYYMRQLEQLSPSMRHELEAVGRHKWARAFFKRKRYQVITT 492

[Close]

BLAST of Lcy03g007200 vs. ExPASy TrEMBL
Match: A0A1S4E0D5 (uncharacterized protein LOC107991253 OS=Cucumis melo OX=3656 GN=LOC107991253 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 1.1e-93
Identity = 173/419 (41.29%), Postives = 240/419 (57.28%), Query Frame = 0


Query: 75  IVPVSKGWVFSCKKHLKKVVSLLAFKGSFQFKTIKSNSKQYTVACIDDSCPWYTCASTYR 134
           ++ +  G +F  K  LKK + +LA   SF+  T++SN   + + C D +CPWY  AS  +
Sbjct: 58  VIHIRVGSMFRQKLVLKKAIYMLALNSSFELVTVRSNRTSFDIRCKDPACPWYLRASVLK 117

Query: 135 TGQLWIVRKFINEHTCSFDVVQNDHREAIASVACEYAKTIMRITTWMHCTPRDIIEYAGK 194
              +WIVRKF + H CS DVV+NDH++A + +  E    I ++     C P D+I Y   
Sbjct: 118 KSDIWIVRKFTDTHLCSVDVVKNDHKQATSWIVSECTNLIFKMNDKTPCRPSDVINYMKI 177

Query: 195 THGINISYDKAWRGREKVLNELRGSPEESCAQIPAFAARLIERNPGTYTAQKVDSNDRFE 254
            H +N+SYDKAWRGRE  LN +RG+P++S   +  F+  LI  NPGTYTA++ D   RF+
Sbjct: 178 HHDVNVSYDKAWRGREIALNSIRGTPKDSYVMLSTFSDALIRNNPGTYTAKEADDEGRFK 237

Query: 255 FFFMSIATSIDGWKHCLPVIPIDGTSLKNKFNGTLLMACTFDGSSKIFPLAFSIVDSEND 314
           F+FM++ATSID W +C+PVI +DG ++KNK+ GTL+ ACT DG+S+I PLAF++VDSEND
Sbjct: 238 FYFMALATSIDAWNYCVPVISVDGATMKNKYLGTLISACTIDGNSQIMPLAFAVVDSEND 297

Query: 315 VSWEWFFKNLKATFGEPNELVIVSDRHKSI------------------------------ 374
           +SW WFF+NLK  FGE NE+VIVSD HKSI                              
Sbjct: 298 LSWSWFFRNLKVVFGEHNEMVIVSDAHKSIENGFNVVYEIAEHGLCAFHLLKNLKKNHKS 357

Query: 375 ----------------------------------------GKGVW--------KYVLMTT 416
                                                   G+  W        +Y ++TT
Sbjct: 358 LPMEDSFNKCARTYTPLEFEYYMRQLEQLSPSMRHELEAVGRHKWARAFFRRKRYQVITT 417

[Close]

BLAST of Lcy03g007200 vs. ExPASy TrEMBL
Match: A0A5A7V1Z6 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G001170 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 4.0e-91
Identity = 175/419 (41.77%), Postives = 238/419 (56.80%), Query Frame = 0


Query: 75  IVPVSKGWVFSCKKHLKKVVSLLAFKGSFQFKTIKSNSKQYTVACIDDSCPWYTCASTYR 134
           ++ V  G +FS K  LKK + +LA   SF+  T++SN   + + C D SC WY  AS ++
Sbjct: 110 VIHVRVGSMFSQKSVLKKSIYMLALNSSFELVTVRSNRTSFDIRCKDPSCLWYLRASVFK 169

Query: 135 TGQLWIVRKFINEHTCSFDVVQNDHREAIASVACEYAKTIMRITTWMHCTPRDIIEYAGK 194
              +WIVRKF + H CS DVV+NDH++A + +  E  K I ++     C P D+I Y   
Sbjct: 170 KSDIWIVRKFTDTHLCSVDVVKNDHKQATSWIVSECTKLIFKMNDKAPCRPSDVINYMKI 229

Query: 195 THGINISYDKAWRGREKVLNELRGSPEESCAQIPAFAARLIERNPGTYTAQKVDSNDRFE 254
            HG+NISYDKAWRGRE  LN +RG+PE+S A + AF+  LI  NPGTYTA++ D   RF+
Sbjct: 230 HHGVNISYDKAWRGREIALNSIRGTPEDSYAMLSAFSDALIRNNPGTYTAEEADDEGRFK 289

Query: 255 FFFMSIATSIDGWKHCLPVIPIDGTSLKNKFNGTLLMACTFDGSSKIFPLAFSIVDSEND 314
           F+FM++A SID W +C+ VI +DG ++KNK+ GTL+ ACT D +S+I P AF +VDSEN 
Sbjct: 290 FYFMALAASIDAWNYCVLVISVDGAAMKNKYLGTLISACTIDRNSQIVPQAFVVVDSENY 349

Query: 315 VSWEWFFKNLKATFGEPNELVIVSDRHKSI------------------------------ 374
           +SW WFF+NLKA FGE NE+VIVSD HKSI                              
Sbjct: 350 LSWSWFFRNLKAVFGEHNEMVIVSDAHKSIENGFNGVYEIAEHGLCAFHLLKNLKKNHKS 409

Query: 375 ----------------------------------------GKGVW--------KYVLMTT 416
                                                   G+  W        +Y ++TT
Sbjct: 410 LPMEDSFNKCARAYTPLKFEYYMRQLEQLSPSMRHELEAVGRHKWARAFFKRKRYQVITT 469

[Close]

BLAST of Lcy03g007200 vs. ExPASy TrEMBL
Match: A0A5A7VAU3 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2030G00150 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 1.4e-88
Identity = 174/443 (39.28%), Postives = 244/443 (55.08%), Query Frame = 0


Query: 51  SRKLILGETNFEFVNSDGIDALIDIVPVSKGWVFSCKKHLKKVVSLLAFKGSFQFKTIKS 110
           S  +I+    FE  N+        ++ +  G +F  K  LKK + +LA   SF+  T++S
Sbjct: 124 SENIIIDLNAFESPNT--------LIHIRVGSMFRQKSVLKKAIYMLALNSSFELVTVRS 183

Query: 111 NSKQYTVACIDDSCPWYTCASTYRTGQLWIVRKFINEHTCSFDVVQNDHREAIASVACEY 170
           N   + + C D +CPWY  A   +   ++  RKF + H CS DVV+NDH++A + +  E 
Sbjct: 184 NRTSFNIRCKDPACPWYLRALVLKKSDIY--RKFTDTHLCSVDVVKNDHKQATSWIVSEC 243

Query: 171 AKTIMRITTWMHCTPRDIIEYAGKTHGINISYDKAWRGREKVLNELRGSPEESCAQIPAF 230
            K I ++     C P ++I Y    H +N+SYDKAWRGRE  LN +RG+PE+S A + AF
Sbjct: 244 TKLIFKMNDKAPCCPSNVINYMKIHHDVNVSYDKAWRGREIALNSIRGTPEDSYAMLSAF 303

Query: 231 AARLIERNPGTYTAQKVDSNDRFEFFFMSIATSIDGWKHCLPVIPIDGTSLKNKFNGTLL 290
           +  LI  NPGTYTA++ D    F+F+FM +A SID W +C+PVI +DG ++KNK+ GTL+
Sbjct: 304 SDALIRNNPGTYTAEEADDEGWFKFYFMVLAASIDAWNYCVPVISVDGAAMKNKYLGTLI 363

Query: 291 MACTFDGSSKIFPLAFSIVDSENDVSWEWFFKNLKATFGEPNELVIVSDRHKSI------ 350
            ACT DG+S+I PLAF +VDSEND+SW WFF+NLKA F E NE+VIVSD HKSI      
Sbjct: 364 SACTIDGNSQIVPLAFVVVDSENDLSWSWFFRNLKAVFWEHNEMVIVSDAHKSIENGFNV 423

Query: 351 ------------------------------------------------------------ 410
                                                                       
Sbjct: 424 VYEIAEHGLCAFHLLKNLKESHKSLPIEDSFNKCTRAYTPLEFEYYMRQLKQLSPSMRHE 483

Query: 411 ----GKGVW--------KYVLMTTNISESLNAYLREARELPIIPLLEFIRDFLQRWFYER 416
               G+  W        +Y +MTTNISES+N+ L+E RELP+I LLE +R  +++WFYER
Sbjct: 484 LEAVGRHKWARAFFKRKRYQVMTTNISESMNSTLKEQRELPVIGLLESVRSLIKKWFYER 543

[Close]

BLAST of Lcy03g007200 vs. NCBI nr
Match: TYK29863.1 (MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 365.5 bits (937), Expect = 5.9e-97
Identity = 180/419 (42.96%), Postives = 244/419 (58.23%), Query Frame = 0


Query: 75  IVPVSKGWVFSCKKHLKKVVSLLAFKGSFQFKTIKSNSKQYTVACIDDSCPWYTCASTYR 134
           ++ +  G +F  K  LKK + +LA   SF+  T++SN   + + C D SCPWY  AS ++
Sbjct: 58  VIHIRVGSMFRQKSVLKKAIYMLALNSSFELVTVRSNRTSFDIRCKDPSCPWYLRASVFK 117

Query: 135 TGQLWIVRKFINEHTCSFDVVQNDHREAIASVACEYAKTIMRITTWMHCTPRDIIEYAGK 194
              +WIVRKF + H CS DVV+NDH++A + +  E  K I +      C P D+I Y   
Sbjct: 118 KSDIWIVRKFTDTHLCSVDVVKNDHKQATSWIVSECTKLIFKTNDKAPCRPSDVINYMKI 177

Query: 195 THGINISYDKAWRGREKVLNELRGSPEESCAQIPAFAARLIERNPGTYTAQKVDSNDRFE 254
            HG+NISYDKAWRGRE  LN +RG+PE+S A + AF+  LI  NPGTYTA++ D   RF+
Sbjct: 178 HHGVNISYDKAWRGREIALNSIRGTPEDSYAMLSAFSDALIRNNPGTYTAEEADDEGRFK 237

Query: 255 FFFMSIATSIDGWKHCLPVIPIDGTSLKNKFNGTLLMACTFDGSSKIFPLAFSIVDSEND 314
           F+FM++A SID W +C+PVI +DG ++KNK+ GTL+ ACT DG+S+I PLAF++VDSEND
Sbjct: 238 FYFMALAASIDAWNYCVPVISVDGAAMKNKYLGTLISACTIDGNSQIVPLAFAVVDSEND 297

Query: 315 VSWEWFFKNLKATFGEPNELVIVSDRHKSI------------------------------ 374
           +SW WFF+NLKA FGE NE+VIVSD HKSI                              
Sbjct: 298 LSWSWFFRNLKAVFGEHNEMVIVSDAHKSIENGFNAVYEIAEHGLCAFHLLKNLKKNHKS 357

Query: 375 ----------------------------------------GKGVW--------KYVLMTT 416
                                                   G+  W        +Y ++TT
Sbjct: 358 LPMEDSFNKCARAYTPLEFEYYMRQLEQLSPSMRHELEAVGRHKWARAFFRRKRYQVITT 417

[Close]

BLAST of Lcy03g007200 vs. NCBI nr
Match: XP_016901440.1 (PREDICTED: uncharacterized protein LOC107991253 [Cucumis melo])

HSP 1 Score: 353.6 bits (906), Expect = 2.3e-93
Identity = 173/419 (41.29%), Postives = 240/419 (57.28%), Query Frame = 0


Query: 75  IVPVSKGWVFSCKKHLKKVVSLLAFKGSFQFKTIKSNSKQYTVACIDDSCPWYTCASTYR 134
           ++ +  G +F  K  LKK + +LA   SF+  T++SN   + + C D +CPWY  AS  +
Sbjct: 58  VIHIRVGSMFRQKLVLKKAIYMLALNSSFELVTVRSNRTSFDIRCKDPACPWYLRASVLK 117

Query: 135 TGQLWIVRKFINEHTCSFDVVQNDHREAIASVACEYAKTIMRITTWMHCTPRDIIEYAGK 194
              +WIVRKF + H CS DVV+NDH++A + +  E    I ++     C P D+I Y   
Sbjct: 118 KSDIWIVRKFTDTHLCSVDVVKNDHKQATSWIVSECTNLIFKMNDKTPCRPSDVINYMKI 177

Query: 195 THGINISYDKAWRGREKVLNELRGSPEESCAQIPAFAARLIERNPGTYTAQKVDSNDRFE 254
            H +N+SYDKAWRGRE  LN +RG+P++S   +  F+  LI  NPGTYTA++ D   RF+
Sbjct: 178 HHDVNVSYDKAWRGREIALNSIRGTPKDSYVMLSTFSDALIRNNPGTYTAKEADDEGRFK 237

Query: 255 FFFMSIATSIDGWKHCLPVIPIDGTSLKNKFNGTLLMACTFDGSSKIFPLAFSIVDSEND 314
           F+FM++ATSID W +C+PVI +DG ++KNK+ GTL+ ACT DG+S+I PLAF++VDSEND
Sbjct: 238 FYFMALATSIDAWNYCVPVISVDGATMKNKYLGTLISACTIDGNSQIMPLAFAVVDSEND 297

Query: 315 VSWEWFFKNLKATFGEPNELVIVSDRHKSI------------------------------ 374
           +SW WFF+NLK  FGE NE+VIVSD HKSI                              
Sbjct: 298 LSWSWFFRNLKVVFGEHNEMVIVSDAHKSIENGFNVVYEIAEHGLCAFHLLKNLKKNHKS 357

Query: 375 ----------------------------------------GKGVW--------KYVLMTT 416
                                                   G+  W        +Y ++TT
Sbjct: 358 LPMEDSFNKCARTYTPLEFEYYMRQLEQLSPSMRHELEAVGRHKWARAFFRRKRYQVITT 417

[Close]

BLAST of Lcy03g007200 vs. NCBI nr
Match: XP_008455803.1 (PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo])

HSP 1 Score: 353.6 bits (906), Expect = 2.3e-93
Identity = 175/419 (41.77%), Postives = 241/419 (57.52%), Query Frame = 0


Query: 75  IVPVSKGWVFSCKKHLKKVVSLLAFKGSFQFKTIKSNSKQYTVACIDDSCPWYTCASTYR 134
           ++ +  G +F  K  LKK + +LA   SF+  T++SN   + + C D SCPWY  AS ++
Sbjct: 133 VIHIRVGSMFRQKSVLKKAIYMLALNSSFELVTVRSNRTSFDIRCKDPSCPWYLRASVFK 192

Query: 135 TGQLWIVRKFINEHTCSFDVVQNDHREAIASVACEYAKTIMRITTWMHCTPRDIIEYAGK 194
              +WIVRKFI  H CS DVV+NDH++A + +  E  K I +    + C P D+I Y   
Sbjct: 193 RSDIWIVRKFIYTHMCSVDVVKNDHKQATSWIVSECTKLIFKTNDKVPCRPSDVINYMKI 252

Query: 195 THGINISYDKAWRGREKVLNELRGSPEESCAQIPAFAARLIERNPGTYTAQKVDSNDRFE 254
            H +NISYDKAW GRE  LN +RG+PE+S A + AF+  LI  NPGTYTA++ D   RF+
Sbjct: 253 HHSVNISYDKAWGGREIALNSIRGTPEDSYAMLSAFSDALIRNNPGTYTAEEADDEGRFK 312

Query: 255 FFFMSIATSIDGWKHCLPVIPIDGTSLKNKFNGTLLMACTFDGSSKIFPLAFSIVDSEND 314
           F+FM++A SID W +C+PVI +DG ++KNK+ GTL+  CT DG+S+I PL F++VDSEND
Sbjct: 313 FYFMALAASIDAWNYCVPVISVDGAAMKNKYLGTLISTCTIDGNSQIVPLPFAVVDSEND 372

Query: 315 VSWEWFFKNLKATFGEPNELVIVSDRHKSI------------------------------ 374
           +SW WFF+NLKA FGE NE++IVSD +KSI                              
Sbjct: 373 LSWSWFFRNLKAVFGEHNEMLIVSDAYKSIENGFNAVYEIAEHGLCAFHLLKNLKKNHKS 432

Query: 375 ----------------------------------------GKGVW--------KYVLMTT 416
                                                   G+  W        +Y ++TT
Sbjct: 433 LPMEDSFNKCARTYTLLEFEYYMRQLEQLSPSMRHELEAVGRHKWARAFFKRKRYQVITT 492

[Close]

BLAST of Lcy03g007200 vs. NCBI nr
Match: KAA0061274.1 (uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa])

HSP 1 Score: 345.1 bits (884), Expect = 8.3e-91
Identity = 175/419 (41.77%), Postives = 238/419 (56.80%), Query Frame = 0


Query: 75  IVPVSKGWVFSCKKHLKKVVSLLAFKGSFQFKTIKSNSKQYTVACIDDSCPWYTCASTYR 134
           ++ V  G +FS K  LKK + +LA   SF+  T++SN   + + C D SC WY  AS ++
Sbjct: 110 VIHVRVGSMFSQKSVLKKSIYMLALNSSFELVTVRSNRTSFDIRCKDPSCLWYLRASVFK 169

Query: 135 TGQLWIVRKFINEHTCSFDVVQNDHREAIASVACEYAKTIMRITTWMHCTPRDIIEYAGK 194
              +WIVRKF + H CS DVV+NDH++A + +  E  K I ++     C P D+I Y   
Sbjct: 170 KSDIWIVRKFTDTHLCSVDVVKNDHKQATSWIVSECTKLIFKMNDKAPCRPSDVINYMKI 229

Query: 195 THGINISYDKAWRGREKVLNELRGSPEESCAQIPAFAARLIERNPGTYTAQKVDSNDRFE 254
            HG+NISYDKAWRGRE  LN +RG+PE+S A + AF+  LI  NPGTYTA++ D   RF+
Sbjct: 230 HHGVNISYDKAWRGREIALNSIRGTPEDSYAMLSAFSDALIRNNPGTYTAEEADDEGRFK 289

Query: 255 FFFMSIATSIDGWKHCLPVIPIDGTSLKNKFNGTLLMACTFDGSSKIFPLAFSIVDSEND 314
           F+FM++A SID W +C+ VI +DG ++KNK+ GTL+ ACT D +S+I P AF +VDSEN 
Sbjct: 290 FYFMALAASIDAWNYCVLVISVDGAAMKNKYLGTLISACTIDRNSQIVPQAFVVVDSENY 349

Query: 315 VSWEWFFKNLKATFGEPNELVIVSDRHKSI------------------------------ 374
           +SW WFF+NLKA FGE NE+VIVSD HKSI                              
Sbjct: 350 LSWSWFFRNLKAVFGEHNEMVIVSDAHKSIENGFNGVYEIAEHGLCAFHLLKNLKKNHKS 409

Query: 375 ----------------------------------------GKGVW--------KYVLMTT 416
                                                   G+  W        +Y ++TT
Sbjct: 410 LPMEDSFNKCARAYTPLKFEYYMRQLEQLSPSMRHELEAVGRHKWARAFFKRKRYQVITT 469

[Close]

BLAST of Lcy03g007200 vs. NCBI nr
Match: KAA0064137.1 (MuDRA-like transposase [Cucumis melo var. makuwa] >TYK28603.1 MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 336.7 bits (862), Expect = 2.9e-88
Identity = 174/443 (39.28%), Postives = 244/443 (55.08%), Query Frame = 0


Query: 51  SRKLILGETNFEFVNSDGIDALIDIVPVSKGWVFSCKKHLKKVVSLLAFKGSFQFKTIKS 110
           S  +I+    FE  N+        ++ +  G +F  K  LKK + +LA   SF+  T++S
Sbjct: 124 SENIIIDLNAFESPNT--------LIHIRVGSMFRQKSVLKKAIYMLALNSSFELVTVRS 183

Query: 111 NSKQYTVACIDDSCPWYTCASTYRTGQLWIVRKFINEHTCSFDVVQNDHREAIASVACEY 170
           N   + + C D +CPWY  A   +   ++  RKF + H CS DVV+NDH++A + +  E 
Sbjct: 184 NRTSFNIRCKDPACPWYLRALVLKKSDIY--RKFTDTHLCSVDVVKNDHKQATSWIVSEC 243

Query: 171 AKTIMRITTWMHCTPRDIIEYAGKTHGINISYDKAWRGREKVLNELRGSPEESCAQIPAF 230
            K I ++     C P ++I Y    H +N+SYDKAWRGRE  LN +RG+PE+S A + AF
Sbjct: 244 TKLIFKMNDKAPCCPSNVINYMKIHHDVNVSYDKAWRGREIALNSIRGTPEDSYAMLSAF 303

Query: 231 AARLIERNPGTYTAQKVDSNDRFEFFFMSIATSIDGWKHCLPVIPIDGTSLKNKFNGTLL 290
           +  LI  NPGTYTA++ D    F+F+FM +A SID W +C+PVI +DG ++KNK+ GTL+
Sbjct: 304 SDALIRNNPGTYTAEEADDEGWFKFYFMVLAASIDAWNYCVPVISVDGAAMKNKYLGTLI 363

Query: 291 MACTFDGSSKIFPLAFSIVDSENDVSWEWFFKNLKATFGEPNELVIVSDRHKSI------ 350
            ACT DG+S+I PLAF +VDSEND+SW WFF+NLKA F E NE+VIVSD HKSI      
Sbjct: 364 SACTIDGNSQIVPLAFVVVDSENDLSWSWFFRNLKAVFWEHNEMVIVSDAHKSIENGFNV 423

Query: 351 ------------------------------------------------------------ 410
                                                                       
Sbjct: 424 VYEIAEHGLCAFHLLKNLKESHKSLPIEDSFNKCTRAYTPLEFEYYMRQLKQLSPSMRHE 483

Query: 411 ----GKGVW--------KYVLMTTNISESLNAYLREARELPIIPLLEFIRDFLQRWFYER 416
               G+  W        +Y +MTTNISES+N+ L+E RELP+I LLE +R  +++WFYER
Sbjct: 484 LEAVGRHKWARAFFKRKRYQVMTTNISESMNSTLKEQRELPVIGLLESVRSLIKKWFYER 543

[Close]

BLAST of Lcy03g007200 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase )

HSP 1 Score: 98.2 bits (243), Expect = 1.6e-20
Identity = 66/269 (24.54%), Postives = 118/269 (43.87%), Query Frame = 0


Query: 81  GWVFSCKKHLKKVVSLLAFKGSFQFKTIKSNSKQYTVACIDDSCPWYTCASTYRTGQLWI 140
           G  F  +  LKK V     +        ++  + YT  C+   C W   A+      L  
Sbjct: 188 GLCFKDRDELKKAVDWWCIRRRRNCIVRETEKEMYTFECVRWKCKWSLRAARMEEHGLVE 247

Query: 141 VRKFINEHTCSFDVVQNDHREAIASVACEYAKTIMRITTWMHCTPRDIIEYAGKTHGINI 200
           + K+   HTCS +   ND     +  A +  + ++RI   +     ++ ++  +  G  +
Sbjct: 248 ITKYTGPHTCSHE-YPNDFE---SEFAADEIERVVRIQPTLSIA--ELKKWWKEKTGYEL 307

Query: 201 SYDKAWRGREKVLNELRGSPEESCAQIPAFAARLIERNPGTYTAQKVD--SNDRFEFF-- 260
              K   G+ +V+  + G  ++S   +P   +     N G     + D   N  F  F  
Sbjct: 308 QTSKMRDGKLEVIKRVFGDEDQSFRVMPKLISAFHSSN-GLLVDWQYDLFPNPDFASFRG 367

Query: 261 -FMSIATSIDGWKHCLPVIPIDGTSLKNKFNGTLLMACTFDGSSKIFPLAFSIVDSENDV 320
            F S + SI+G++HC P+I +D  SL  K+   L++A   D ++K FPLAF++    +  
Sbjct: 368 VFWSFSQSIEGFQHCRPLIVVDTKSLNGKYQLKLMIASGVDAANKFFPLAFAVTKEVSTD 427

Query: 321 SWEWFFKNLKATFGEPNELVIVSDRHKSI 345
           SW WFF  ++    +  +L ++S   + I
Sbjct: 428 SWRWFFTKIREKVTQRKDLCLISSPLRDI 449

[Close]

BLAST of Lcy03g007200 vs. TAIR 10
Match: AT1G64255.1 (MuDR family transposase )

HSP 1 Score: 90.9 bits (224), Expect = 2.6e-18
Identity = 65/269 (24.16%), Postives = 109/269 (40.52%), Query Frame = 0


Query: 81  GWVFSCKKHLKKVVSLLAFKGSFQFKTIKSNSKQYTVACIDDSCPWYTCASTYRTGQLWI 140
           G  F     LKK V   + K   +    ++   +Y   CI   C W   A+  +   L  
Sbjct: 195 GLCFKDGDELKKAVDWCSLKAQQKCVVRETAKDEYIFECIRWKCKWSLGAARMKKHGLVE 254

Query: 141 VRKFINEHTCSFDVVQNDHREAIASVACEYAKTIMRITTWMHCTPRDIIEYAGKTHGINI 200
           + K+   HTC   +V  D +    +   E A   M        T  ++ ++  K  G  +
Sbjct: 255 IIKYTGPHTC-HPIVPEDFKSEFETDEIERAVRYMPTQ-----TISELKKWWKKKIGYEL 314

Query: 201 SYDKAWRGREKVLNELRGSPEESCAQIPAFAARLIERNPGTYTAQKVD--SNDRFEFF-- 260
                   +EK +  + G  ++S    P   + L   N G     K D   N  F  F  
Sbjct: 315 ETSDVRLAKEKAIKRVFGDWDQSFEDFPKLMSALCSSN-GLLVDWKYDLFPNPNFASFCG 374

Query: 261 -FMSIATSIDGWKHCLPVIPIDGTSLKNKFNGTLLMACTFDGSSKIFPLAFSIVDSENDV 320
            F +   SI+G++HC P+I +D  +L  ++   L++A   D ++K FPLAF++    +  
Sbjct: 375 VFWAFPQSIEGFQHCRPLIVVDTKNLNCEYQLKLMIASGVDAANKYFPLAFAVTKEVSTD 434

Query: 321 SWEWFFKNLKATFGEPNELVIVSDRHKSI 345
            W WF   ++    +   L ++S  H  I
Sbjct: 435 IWRWFLTGIREKVTQRKGLCLISSPHPDI 456

[Close]

BLAST of Lcy03g007200 vs. TAIR 10
Match: AT1G49920.1 (MuDR family transposase )

HSP 1 Score: 76.6 bits (187), Expect = 5.1e-14
Identity = 60/271 (22.14%), Postives = 108/271 (39.85%), Query Frame = 0


Query: 81  GWVFSCKKHLKKVVSLLAFKGSFQFKTIKSNSKQYTVACIDDSCPWYTCASTYRTGQLWI 140
           G  F     +KK V   + K   +    ++    Y V C    C W  CAS      L+ 
Sbjct: 183 GLCFKDLAEMKKAVDWCSIKRRQKCLLRETEKDVYVVECERWHCKWSICASRREEDGLFE 242

Query: 141 VRKFINEHTCSFDVVQNDHREAIASVACEYAKTIMRITTWMHCTPRDIIEYAGKTHGI-- 200
           + +    H C  + + +   E I        + ++R+   +     D  ++  K  G   
Sbjct: 243 ITECSGPHDCYPEHLNDFDAECIPF----QIERVVRVQPTLSTAELD--KWWEKKFGFAL 302

Query: 201 -----NISYDKAWRGREKVLNELRGSPEESCAQIPAFAARLIERNPGTYTAQKVDS---- 260
                + S       + K +    G  ++S   IP   + L   N G     + DS    
Sbjct: 303 DQVVEHCSEGLVEDAKVKAIKRFFGDWDQSFRLIPKLMSVLHSSN-GLLVDWQYDSLTHD 362

Query: 261 --NDRFEFFFMSIATSIDGWKHCLPVIPIDGTSLKNKFNGTLLMACTFDGSSKIFPLAFS 320
             +  F   F + + SI G++HC P+I +D  +L  K+   L++A  FD +++ FPLAF+
Sbjct: 363 PEHASFRGLFWAFSQSIQGFQHCRPLIVVDTKNLGGKYKMKLMIASAFDATNQYFPLAFA 422

Query: 321 IVDSENDVSWEWFFKNLKATFGEPNELVIVS 339
           +    +  SW WF   ++    +   + ++S
Sbjct: 423 VTKEVSVDSWRWFLTRIREKVTQRQGICLIS 446

The following BLAST results are available for this feature:

BLAST of Lcy03g007200 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy03g007200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E198	2.9e-97	42.96	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3C300	1.1e-93	41.77	uncharacterized protein LOC103495899 OS=Cucumis melo OX=3656 GN=LOC103495899 PE=...	[more]
A0A1S4E0D5	1.1e-93	41.29	uncharacterized protein LOC107991253 OS=Cucumis melo OX=3656 GN=LOC107991253 PE=...	[more]
A0A5A7V1Z6	4.0e-91	41.77	CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A5A7VAU3	1.4e-88	39.28	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]

BLAST of Lcy03g007200 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK29863.1	5.9e-97	42.96	MuDRA-like transposase [Cucumis melo var. makuwa]	[more]
XP_016901440.1	2.3e-93	41.29	PREDICTED: uncharacterized protein LOC107991253 [Cucumis melo]	[more]
XP_008455803.1	2.3e-93	41.77	PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]	[more]
KAA0061274.1	8.3e-91	41.77	uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]	[more]
KAA0064137.1	2.9e-88	39.28	MuDRA-like transposase [Cucumis melo var. makuwa] >TYK28603.1 MuDRA-like transpo...	[more]

BLAST of Lcy03g007200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64260.1	1.6e-20	24.54	MuDR family transposase	[more]
AT1G64255.1	2.6e-18	24.16	MuDR family transposase	[more]
AT1G49920.1	5.1e-14	22.14	MuDR family transposase	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018289	MULE transposase domain	PFAM	PF10551	MULE	coord: 273..346 e-value: 6.8E-13 score: 48.9
IPR004332	Transposase, MuDR, plant	PFAM	PF03108	DBD_Tnp_Mut	coord: 78..140 e-value: 1.6E-10 score: 40.8
None	No IPR available	PANTHER	PTHR31973	POLYPROTEIN, PUTATIVE-RELATED	coord: 94..347
None	No IPR available	PANTHER	PTHR31973:SF106	OS09G0268600 PROTEIN	coord: 94..347

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g007200.1	Lcy03g007200.1	mRNA