Homology
BLAST of Lcy03g006870 vs. ExPASy Swiss-Prot
Match:
O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)
HSP 1 Score: 198.4 bits (503), Expect = 4.3e-49
Identity = 185/771 (23.99%), Postives = 337/771 (43.71%), Query Frame = 0
Query: 19 QFEGWITGVYGLCTYRERFHFLQELHDIQGLCQGNWCIAGDFNMVRWSKERLNATNSVRS 78
Q E I +Y T RF Q L D+Q + I GDFN +R +
Sbjct: 106 QEELTILNIYAPNTGAPRF-IKQVLSDLQRDLDSHTLIMGDFNTPLSILDRSTRQKVNKD 165
Query: 79 MRKFNSFIESYDLID------PPMSNGTFSWSRMGTRVAASRIDRFLISQLWNNTFPELR 138
++ NS + DLID P + TF + T S+ID + S+ + R
Sbjct: 166 TQELNSALHQTDLIDIYRTLHPKSTEYTFFSAPHHT---YSKIDHIVGSKALLSKCK--R 225
Query: 139 VERLHRPTSDHSPILMSIGV--------VKWGPTPFRFENLWIDTP---------EFKEN 198
E + SDHS I + + + W + W+ E EN
Sbjct: 226 TEIITNYLSDHSAIKLELRIKNLTQSRSTTWKLNNLLLNDYWVHNEMKAEIKMFFETNEN 285
Query: 199 IEKWWGDLKPIGWAGFRLMEKLKGLKVLIKEWNKELMAMAINKKATILRKIEVFDKMEEQ 258
+ + +L W F+ + +G + + + ++ I+ + L+++E +EQ
Sbjct: 286 KDTTYQNL----WDAFKAV--CRGKFIALNAYKRKQERSKIDTLTSQLKELE----KQEQ 345
Query: 259 NAIDASQIEERKILKAELLDLTVAKQRSINQKCKLKWIQEGDENSSFFHKWASTMRSKAF 318
AS+ +E ++AEL ++ K + + + + ++ + R K
Sbjct: 346 THSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDRPLARLIKKKREKNQ 405
Query: 319 ISMIEKENGEILTKQEEIEAEILSFYSKFYEKDYDHKFVIEGPDWVPIGDISKSKLEEAF 378
I I+ + G+I T EI+ I +Y Y ++ + E ++ + + EE
Sbjct: 406 IDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLEN--LEEMDTFLDTYTLPRLNQEEVE 465
Query: 379 SV------EEIYKVVMDMGSQKSPGPDGMTGEFWKNYWNILKSDLVEVFQEFFQKGIINK 438
S+ EI ++ + ++KSPGPDG T EF++ Y L L+++FQ ++GI+
Sbjct: 466 SLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPN 525
Query: 439 RTNETYICLIPKKKR-ALKVKDFRPISLVTSPYKLIAKVLAERLKKVLPNTISDCQAAFV 498
E I LIPK R K ++FRPISL+ K++ K+LA R+++ + I Q F+
Sbjct: 526 SFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFI 585
Query: 499 QGRQILDAILVATEAVEDIRLRKEKG-FLLKLDLEKAYDMVNWDFLDGILELKGFGHKWR 558
G Q I + ++ I K+K ++ +D EKA+D + F+ L G +
Sbjct: 586 PGMQGWFNIRKSINVIQHINRAKDKNHVIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYL 645
Query: 559 RWIKGCLYNTNFSILINGRPRGKIMASRGLRQGDPLSPFLFTLVGDAISKSVHYCIEKKI 618
+ I+ +I++NG+ G RQG PLSP LF +V + +++++ ++K
Sbjct: 646 KIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIR---QEKE 705
Query: 619 LKGWEIGQHKSIVSILQYADDTLLFCLANDRDMTKWWDILRMI---MRGSGLALNLAKSA 678
+KG ++G K V + +ADD +++ + + ++L++I + SG +N+ KS
Sbjct: 706 IKGIQLG--KEEVKLSLFADDMIVYL---ENPIVSAQNLLKLISNFSKVSGYKINVQKSQ 765
Query: 679 LIGINVASPQANNLANLLGFQSDSLPINYLGFPLGGNYHRI--SFWEPLIERFNHKLDSW 738
N + + L F S I YLG L + + ++PL++ + W
Sbjct: 766 AFLYNNNRQTESQIMGELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKW 825
Query: 739 RKLPISKGGRVTLAQSVLNSLPLYLFSL--LKAPKSTINSMEKIVRDFVWS 752
+ +P S GR+ + + + +Y F+ +K P + +EK F+W+
Sbjct: 826 KNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWN 850
BLAST of Lcy03g006870 vs. ExPASy Swiss-Prot
Match:
P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)
HSP 1 Score: 198.0 bits (502), Expect = 5.7e-49
Identity = 201/813 (24.72%), Postives = 359/813 (44.16%), Query Frame = 0
Query: 39 FLQE-LHDIQGLCQGNWCIAGDFNMVRWSKERLNATNSVRSMRKFNSFIESYDLID---- 98
F++E L D+ L + GDFN +R + + + NS I+ DL D
Sbjct: 123 FIRETLTDMSNLISSTSIVVGDFNTPLAVLDRSSKKKLSKEILDLNSTIQHLDLTDIYRT 182
Query: 99 --PPMSNGTFSWSRMGTRVAASRIDRFLISQLWNNTFPELRVERLHRPTSDHSPILMSIG 158
P + TF S GT S+ID L + +N ++E + SDH I + +
Sbjct: 183 FHPNKTEYTFFSSAHGT---YSKIDHILGHK--SNLSKFKKIEIIPCIFSDHHGIKVELN 242
Query: 159 --------VVKWGPTPFRFENLWIDTPEFKENIEKW--------------WGDLKPIGWA 218
W ++ W+ E K+ I K+ W K +
Sbjct: 243 NNRNLHTHTKTWKLNNLMLKDTWV-IDEIKKEITKFLEQNNNQDTNYQNLWDTAKAV--- 302
Query: 219 GFRLMEKLKGLKVLIKEWNKELMAMAINKKATILRKIEVFDKMEEQNAIDASQIEERKIL 278
L K L+ +K+ +E +N L+++E EE + S+ +E +
Sbjct: 303 ---LRGKFIALQAFLKKTERE----EVNNLMGHLKQLE----KEEHSNPKPSRRKEITKI 362
Query: 279 KAELLDLTVAKQRSINQ--KCKLKWIQEGDENSSFFHKWASTMRSKAFISMIEKENGEIL 338
+AEL + + +R I Q K K + ++ ++ R K+ IS I N EI
Sbjct: 363 RAELNE--IENKRIIQQINKSKSWFFEKINKIDKPLANLTRKKRVKSLISSIRNGNDEIT 422
Query: 339 TKQEEIEAEILSFYSKFYEKDYDH-KFVIEGPDWVPIGDISKSKLE---EAFSVEEIYKV 398
T EI+ + +Y K Y Y++ K + + + + +S+ ++E S EI
Sbjct: 423 TDPSEIQKILNEYYKKLYSHKYENLKEIDQYLEACHLPRLSQKEVEMLNRPISSSEIAST 482
Query: 399 VMDMGSQKSPGPDGMTGEFWKNYWNILKSDLVEVFQEFFQKGIINKRTNETYICLIPKK- 458
+ ++ +KSPGPDG T EF++ + L L+ +FQ ++GI+ E I LIPK
Sbjct: 483 IQNLPKKKSPGPDGFTSEFYQTFKEELVPILLNLFQNIEKEGILPNTFYEANITLIPKPG 542
Query: 459 KRALKVKDFRPISLVTSPYKLIAKVLAERLKKVLPNTISDCQAAFVQGRQILDAILVATE 518
K + +++RPISL+ K++ K+L R+++ + I Q F+ G Q I +
Sbjct: 543 KDPTRKENYRPISLMNIDAKILNKILTNRIQQHIKKIIHHDQVGFIPGSQGWFNIRKSIN 602
Query: 519 AVEDI-RLRKEKGFLLKLDLEKAYDMVNWDFLDGILELKGFGHKWRRWIKGCLYNTNFSI 578
++ I +L+ + +L +D EKA+D + F+ L+ G + + I+ +I
Sbjct: 603 VIQHINKLKNKDHMILSIDAEKAFDNIQHPFMIRTLKKIGIEGTFLKLIEAIYSKPTANI 662
Query: 579 LINGRPRGKIMASRGLRQGDPLSPFLFTLVGDAISKSVHYCIEKKILKGWEIGQHKSIVS 638
++NG G RQG PLSP LF +V + ++ ++ E+K +KG IG + +S
Sbjct: 663 ILNGVKLKSFPLRSGTRQGCPLSPLLFNIVMEVLAIAIR---EEKAIKGIHIGSEEIKLS 722
Query: 639 ILQYADDTLLFCLANDRD-MTKWWDILRMIMRGSGLALNLAKSALIGINVASPQANNLAN 698
+ +ADD +++ L N RD TK ++++ SG +N KS + + +
Sbjct: 723 L--FADDMIVY-LENTRDSTTKLLEVIKEYSNVSGYKINTHKSVAFIYTNNNQAEKTVKD 782
Query: 699 LLGFQSDSLPINYLGFPLGGNYHRI--SFWEPLIERFNHKLDSWRKLPISKGGRVTLAQS 758
+ F + YLG L + + +E L + ++ W+ +P S GR+ + +
Sbjct: 783 SIPFTVVPKKMKYLGVYLTKDVKDLYKENYETLRKEIAEDVNKWKNIPCSWLGRINIVKM 842
Query: 759 VLNSLPLYLFSL--LKAPKSTINSMEKIVRDFVWSGGCYKQGSNLVKWEWSSLSCFHGGL 808
+ +Y F+ +KAP S +EKI+ F+W+ ++ + K S+ + GG+
Sbjct: 843 SILPKAIYNFNAIPIKAPLSYFKDLEKIILHFIWN----QKKPQIAKTLLSNKN-KAGGI 901
BLAST of Lcy03g006870 vs. ExPASy Swiss-Prot
Match:
P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)
HSP 1 Score: 187.2 bits (474), Expect = 1.0e-45
Identity = 207/823 (25.15%), Postives = 350/823 (42.53%), Query Frame = 0
Query: 24 ITGVYGLCTYRERFHFLQELHDIQGLCQGN--WCIAGDFNMVRWSKERLNATNSVRSMRK 83
+ VY T ER F + L + I GDFN +++R S
Sbjct: 106 LMNVYAPTTGPERARFFESLSAYMETIDSDEALIIGGDFNYTLDARDRNVPKKRDSSESV 165
Query: 84 FNSFIESYDLID------PPMSNGTFSWSRMGTRVAASRIDRFLISQLWNNTFPELRVER 143
I + L+D P T+ R G V+ SRIDR IS + + R
Sbjct: 166 LRELIAHFSLVDVWREQNPETVAFTYVRVRDG-HVSQSRIDRIYISSHLMSRAQSSTI-R 225
Query: 144 LHRPTSDHSPILMSIGVVKWGPTP--FRFENLWIDTPEFKENIEKWWGDLKPIGWAGFR- 203
L P SDH+ + + + + P + F N ++ F +++ W GW F+
Sbjct: 226 L-APFSDHNCVSLRMSIAPSLPKAAYWHFNNSLLEDEGFAKSVRDTWR-----GWRAFQD 285
Query: 204 ---------LMEKLKGLKVLIKEWNKELMAMAINKKATILRKIEVFDKME-----EQNAI 263
+ K+ LK+L +E+ K + N + L EV D + E A+
Sbjct: 286 EFATLNQWWDVGKVH-LKLLCQEYTKSVSGQR-NAEIEALNG-EVLDLEQRLSGSEDQAL 345
Query: 264 DASQIEERKILKAELLDLTVAKQRSINQKCKLKWIQEGDENSSFFHKWASTMRSKAFISM 323
+E ++ L+ ++ + R + +++ + + D S FF+ ++ I+
Sbjct: 346 QCEYLERKEALR----NMEQRQARGAFVRSRMQLLCDMDRGSRFFYALEKKKGNRKQITC 405
Query: 324 IEKENGEILTKQEEIEAEILSFYSKFYEKDYDHKFVIEGP-DWVP-IGDISKSKLEEAFS 383
+ E+G L E I SFY + D E D +P + + K +LE +
Sbjct: 406 LFAEDGTPLEDPEAIRDRARSFYQNLFSPDPISPDACEELWDGLPVVSERRKERLETPIT 465
Query: 384 VEEIYKVVMDMGSQKSPGPDGMTGEFWKNYWNILKSDLVEVFQEFFQKGIINKRTNETYI 443
++E+ + + M KSPG DG+T EF++ +W+ L D V E F+KG + +
Sbjct: 466 LDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLSCRRAVL 525
Query: 444 CLIPKKKRALKVKDFRPISLVTSPYKLIAKVLAERLKKVLPNTISDCQAAFVQGRQILDA 503
L+PKK +K++RP+SL+++ YK++AK ++ RLK VL I Q+ V GR I D
Sbjct: 526 SLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQSYTVPGRTIFDN 585
Query: 504 ILVATEAVEDIRLRKEKGFLLKLDLEKAYDMVNWDFLDGILELKGFGHKWRRWIKGCLYN 563
+ + + + R L LD EKA+D V+ +L G L+ FG ++ ++K +
Sbjct: 586 VFLIRDLLHFARRTGLSLAFLSLDQEKAFDRVDHQYLIGTLQAYSFGPQFVGYLKTMYAS 645
Query: 564 TNFSILINGRPRGKIMASRGLRQGDPLSPFLFTLVGDAISKSVHYCIEKKILKGWEIGQH 623
+ IN + RG+RQG PLS L++L + C+ +K L G + +
Sbjct: 646 AECLVKINWSLTAPLAFGRGVRQGCPLSGQLYSLAIEPF-----LCLLRKRLTGLVLKEP 705
Query: 624 KSIVSILQYADDTLLFCLANDR-DMTKWWDILRMIMRGSGLALNLAKSALIGINVASPQA 683
V + YADD +L +A D D+ + + + S +N +KS+ G+ S +
Sbjct: 706 DMRVVLSAYADDVIL--VAQDLVDLERAQECQEVYAAASSARINWSKSS--GLLEGSLKV 765
Query: 684 NNLANLL-GFQSDSLPINYLGFPLGGNYHRIS--FWEPLIERFNHKLDSWRKLP--ISKG 743
+ L +S I YLG L + +S F E L E +L W+ +S
Sbjct: 766 DFLPPAFRDISWESKIIKYLGVYLSAEEYPVSQNFIE-LEECVLTRLGKWKGFAKVLSMR 825
Query: 744 GRVTLAQSVLNSLPLYLFSLLKAPKSTINSMEKIVRDFVWSGGCYKQGSNLVKWEWSSLS 803
GR + ++ S Y L + I +++ + DF+W G + V SSL
Sbjct: 826 GRALVINQLVASQIWYRLICLSPTQEFIAKIQRRLLDFLWI------GKHWVSAGVSSLP 885
Query: 804 CFHGGLGVGSLAQKNFSLMTKWLWRFTQEKKS-LWRQIIVSIY 813
GG GV + + + + + R+ S W + S Y
Sbjct: 886 LKEGGQGVVCIRSQVHTFRLQQIQRYLYADPSPQWCTLASSFY 897
BLAST of Lcy03g006870 vs. ExPASy Swiss-Prot
Match:
P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)
HSP 1 Score: 186.4 bits (472), Expect = 1.7e-45
Identity = 197/802 (24.56%), Postives = 339/802 (42.27%), Query Frame = 0
Query: 56 IAGDFNMVRWSKERLNATNSVRSMRKFNSFIESYDLID------PPMSNGTFSWSRMGTR 115
I GDFN SK+R R K ++ DL D P TF + GT
Sbjct: 149 IVGDFNTPLSSKDRSWKQKLNRDTVKLTEVMKQMDLTDIYRTFYPKTKGYTFFSAPHGT- 208
Query: 116 VAASRIDRFLISQLWNNTFPELRVERLHRPTSDHS--PILMSIGVVKWGPT-PFRFENLW 175
S+ID + + N + +E + SDH ++ + + PT ++ N
Sbjct: 209 --FSKIDHIIGHKTGLNRYK--NIEIVPCILSDHHGLRLIFNNNINNGKPTFTWKLNNTL 268
Query: 176 IDTPEFKENIEKWWGDL----------KPIGWAGFRLMEKLKGLKVLIKEWNKELMAMAI 235
++ KE I+K D P W + L+G + + K+
Sbjct: 269 LNDTLVKEGIKKEIKDFLEFNENEATTYPNLWDTMKAF--LRGKLIALSASKKKRETAHT 328
Query: 236 NKKATILRKIEVFDKMEEQNAIDASQIEERKILKAELLDLTVAKQRSINQKCKLKWIQEG 295
+ T L+ +E +E N+ S+ +E L+ E INQ + IQ
Sbjct: 329 SSLTTHLKALE----KKEANSPKRSRRQEIIKLRGE-----------INQVETRRTIQRI 388
Query: 296 DENSSFFHKWASTM-----------RSKAFISMIEKENGEILTKQEEIEAEILSFYSKFY 355
++ S+F + + + R K I+ I E G+I T EEI+ I SFY + Y
Sbjct: 389 NQTRSWFFEKINKIDKPLARLTKGHRDKILINKIRNEKGDITTDPEEIQNTIRSFYKRLY 448
Query: 356 EKDYDH-----KFVIEGPDWVPIGDISKSK---LEEAFSVEEIYKVVMDMGSQKSPGPDG 415
++ KF+ D + +++ + L S +EI V+ + ++KSPGPDG
Sbjct: 449 STKLENLDEMDKFL----DRYQVPKLNQDQVDHLNSPISPKEIEAVINSLPTKKSPGPDG 508
Query: 416 MTGEFWKNYWNILKSDLVEVFQEFFQK----GIINKRTNETYICLIPK-KKRALKVKDFR 475
+ EF++ + K DL+ + + F K G + E I LIPK +K K+++FR
Sbjct: 509 FSAEFYQTF----KEDLIPILHKLFHKIEVEGTLPNSFYEATITLIPKPQKDPTKIENFR 568
Query: 476 PISLVTSPYKLIAKVLAERLKKVLPNTISDCQAAFVQGRQILDAILVATEAVEDIRLRKE 535
PISL+ K++ K+LA R+++ + I Q F+ G Q I + + I K+
Sbjct: 569 PISLMNIDAKILNKILANRIQEHIKAIIHPDQVGFIPGMQGWFNIRKSINVIHYINKLKD 628
Query: 536 KG-FLLKLDLEKAYDMVNWDFLDGILELKGFGHKWRRWIKGCLYNTNFSILINGRPRGKI 595
K ++ LD EKA+D + F+ +LE G + IK +I +NG I
Sbjct: 629 KNHMIISLDAEKAFDKIQHPFMIKVLERSGIQGPYLNMIKAIYSKPVANIKVNGEKLEAI 688
Query: 596 MASRGLRQGDPLSPFLFTLVGDAISKSVHYCIEKKILKGWEIGQHKSIVSILQYADDTLL 655
G RQG PLSP+LF +V + +++++ ++K +KG +IG+ + +S+L ADD ++
Sbjct: 689 PLKSGTRQGCPLSPYLFNIVLEVLARAIR---QQKEIKGIQIGKEEVKISLL--ADDMIV 748
Query: 656 FCLANDRDMTKWWDILRMIMRGSGLALNLAKSALIGINVASPQANNLANLLGFQSDSLPI 715
+ + +++ G +N KS + F + I
Sbjct: 749 YISDPKNSTRELLNLINSFGEVVGYKINSNKSMAFLYTKNKQAEKEIRETTPFSIVTNNI 808
Query: 716 NYLGFPLGGNYHRI--SFWEPLIERFNHKLDSWRKLPISKGGRVTLAQSVLNSLPLYLFS 775
YLG L + ++ L + L W+ LP S GR+ + + + +Y F+
Sbjct: 809 KYLGVTLTKEVKDLYDKNFKSLKKEIKEDLRRWKDLPCSWIGRINIVKMAILPKAIYRFN 868
Query: 776 L--LKAPKSTINSMEKIVRDFVWSGGCYKQGSNLVKWEWSSLSCFHGGLGVGSLA--QKN 808
+K P N +E + FVW+ + +L+K + +S GG+ + L +
Sbjct: 869 AIPIKIPTQFFNELEGAICKFVWNNKKPRIAKSLLKDKRTS-----GGITMPDLKLYYRA 909
BLAST of Lcy03g006870 vs. ExPASy Swiss-Prot
Match:
P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)
HSP 1 Score: 136.3 bits (342), Expect = 2.0e-30
Identity = 100/419 (23.87%), Postives = 181/419 (43.20%), Query Frame = 0
Query: 691 LIERFNHKLDSWRKLPISKGGRVTLAQSVLNSLPLYLFSLLKAPKSTINSMEKIVRDFVW 750
++ER + ++ WR+ +S GR+TL ++VL+S+P++ S + P+S +N ++++ R F+W
Sbjct: 16 ILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRTFLW 75
Query: 751 SGGCYKQGSNLVKWEWSSLSCFHGGLGVGSLAQKNFSLMTKWLWRFTQEKKSLWRQIIVS 810
K+ +LVKW GGLGV + N +L++K WR QEK SLW ++
Sbjct: 76 GSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQK 135
Query: 811 IYGAS---------PEG-WSTTPFRGKKGNRIWVDIAANF-PTFAKLAKFVVNNGTSIKF 870
Y P+G WS+T W IA + ++ +G I+F
Sbjct: 136 KYHVGEIRDSRWLIPKGSWSST----------WRSIAIGLRDVVSHGVGWIPGDGQQIRF 195
Query: 871 WKDSWCDNQTLQALFPDLYLISERKNATVAECWEGSNQAWNLAFRRGLFDREVSSWMILV 930
W D W + L L D + VA+ + W+ A + ++ + +
Sbjct: 196 WTDRWVSGKPLLEL--DNGERPTDCDTVVAKDLWIPGRGWDFA---KIDPYTTNNTRLEL 255
Query: 931 EKLSSISLNSEQDDIRWSLEGSSSYTARSMFQKMIKISPKVSQNLC---NLIWKHRSPKK 990
+ + +D + W ++ RS ++ M+ + N+ N +WK R P++
Sbjct: 256 RAVVLDLVTGARDRLSWKFSQDGQFSVRSAYE-MLTVDEVPRPNMASFFNCLWKVRVPER 315
Query: 991 VQVFLWSLAYRSLNTDERIERKFKSWSLSPSACKLCLLLGEDLDHLFLHCAFAKKVWFFV 1050
V+ FLW + +++ T+E R+ S S + C++C E + H+ C +W V
Sbjct: 316 VKTFLWLVGNQAVMTEEERHRRHLSAS---NVCQVCKGGVESMLHVLRDCPAQLGIWVRV 375
Query: 1051 ANLFGMSFCLPNKIEDWLLEGLAAWNLKKNAKIMAGCAFRAAVWLLWKERNSRTFEDKS 1096
+ +WL + L + I F +W WK R F + +
Sbjct: 376 VPQRRQQGFFSKSLFEWLYDNLG--DRSGCEDIPWSTIFAVIIWWGWKWRCGNIFGENT 413
BLAST of Lcy03g006870 vs. ExPASy TrEMBL
Match:
A0A438GDE7 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_4 PE=4 SV=1)
HSP 1 Score: 913.3 bits (2359), Expect = 9.8e-262
Identity = 447/1099 (40.67%), Postives = 657/1099 (59.78%), Query Frame = 0
Query: 4 LLGAFSISIECSFNGQFEGWITGVYGLCTYRERFHFLQELHDIQGLCQGNWCIAGDFNMV 63
+LG+FS+SI+ + NG W++ VYG R EL DI GL WC+ GDFN++
Sbjct: 896 MLGSFSVSIKFTLNGCESLWLSAVYGPNNSALRKDLWVELSDIAGLASPRWCVGGDFNVI 955
Query: 64 RWSKERLNATNSVRSMRKFNSFIESYDLIDPPMSNGTFSWSRMGTRVAASRIDRFLISQL 123
R S E+L + SM+ F+ FI +LID P+ + +F+WS M R+DRFL S
Sbjct: 956 RRSSEKLGGSRLTPSMKDFDDFISDCELIDLPLRSASFTWSNMQVNPVCKRLDRFLYSNE 1015
Query: 124 WNNTFPELRVERLHRPTSDHSPILMSIGVVKWGPTPFRFENLWIDTPEFKENIEKWWGDL 183
W TFP+ L R TSDH PI++ KWGPTPFRFEN+W+ P FKEN +WW +
Sbjct: 1016 WEQTFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGRWWREF 1075
Query: 184 KPIGWAGFRLMEKLKGLKVLIKEWNKELMAMAINKKATILRKIEVFDKMEEQNAIDASQI 243
+ GW G + M KL+ +K +K WNK +K IL + FD +E++ + +
Sbjct: 1076 QGNGWEGHKFMRKLQFVKAKLKVWNKASFGELSKRKEDILSALVNFDSLEQEGGLSHELL 1135
Query: 244 EERKILKAELLDLTVAKQRSINQKCKLKWIQEGDENSSFFHKWASTMRSKAFISMIEKEN 303
+R I K EL +L + ++ QK ++KW++EGD NS FFHK A+ R++ FI +E EN
Sbjct: 1136 AQRAIKKGELEELILREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKFIKELENEN 1195
Query: 304 GEILTKQEEIEAEILSFYSKFYEKDYDHKFVIEGPDWVPIGDISKSKLEEAFSVEEIYKV 363
G+++ E I+ EIL ++ K Y + +EG DW PI S +LE F+ EEI K
Sbjct: 1196 GQMMNNSESIKEEILRYFEKLYTSPSGESWRVEGLDWSPISGESAVRLESPFTEEEICKA 1255
Query: 364 VMDMGSQKSPGPDGMTGEFWKNYWNILKSDLVEVFQEFFQKGIINKRTNETYICLIPKKK 423
+ M K+PGPDG T +++ W ++K DLV+VF EF + GIIN+ TN ++I L+PKK
Sbjct: 1256 IFQMDRDKAPGPDGFTIAVFQDCWEVIKEDLVKVFTEFHRSGIINQSTNASFIVLLPKKS 1315
Query: 424 RALKVKDFRPISLVTSPYKLIAKVLAERLKKVLPNTISDCQAAFVQGRQILDAILVATEA 483
+ ++ DFRPISL+TS YK+IAKVLA R+++VL TI Q AFVQGRQILDA+L+A E
Sbjct: 1316 MSRRISDFRPISLITSLYKIIAKVLAGRIREVLHETIHSTQGAFVQGRQILDAVLIANEI 1375
Query: 484 VEDIRLRKEKGFLLKLDLEKAYDMVNWDFLDGILELKGFGHKWRRWIKGCLYNTNFSILI 543
V++ R E+G + K+D EKAYD V+WDFLD ++E+KGFG +WR+W++GCL + +F++L+
Sbjct: 1376 VDEKRRSGEEGVVFKIDFEKAYDHVSWDFLDHVMEMKGFGIRWRKWMRGCLSSVSFAVLV 1435
Query: 544 NGRPRGKIMASRGLRQGDPLSPFLFTLVGDAISKSVHYCIEKKILKGWEIGQHKSIVSIL 603
NG +G + ASRGLRQGDPLSPFLFT+V D +S+ + E+ +L+G+++G++++ VS L
Sbjct: 1436 NGNAKGWVKASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLEGFKVGRNRTRVSHL 1495
Query: 604 QYADDTLLFCLANDRDMTKWWDILRMIMRGSGLALNLAKSALIGINVASPQANNLANLLG 663
Q+ADDT+ F + + DM ++L + SGL +NL KS + GIN+ + LA +L
Sbjct: 1496 QFADDTIFFSSSREEDMMTLKNVLLVFGHISGLKVNLDKSNIYGINLEQNHLSRLAEMLD 1555
Query: 664 FQSDSLPINYLGFPLGGNYHRISFWEPLIERFNHKLDSWRKLPISKGGRVTLAQSVLNSL 723
++ PI YLG PLGGN FW+P+IER + +LD W+K +S GGR+TL QS L +
Sbjct: 1556 CKASGWPILYLGLPLGGNPKTSGFWDPVIERISRRLDGWQKAYLSFGGRITLIQSCLTHM 1615
Query: 724 PLYLFSLLKAPKSTINSMEKIVRDFVWSGGCYKQGSNLVKWEWSSLSCFHGGLGVGSLAQ 783
P Y SL K P S +E++ RDF+WSG + +LV W+ GGLG G ++
Sbjct: 1616 PCYFLSLFKIPASVAAKIERMQRDFLWSGVGEGKRDHLVNWDVVCKPKSRGGLGFGKISI 1675
Query: 784 KNFSLMTKWLWRFTQEKKSLWRQIIVSIYGASPEGWSTTPFRGKKGNRIWVDIAANFPTF 843
+N +L+ KWLWR+ +E +LW Q+I+SIYG+ GW W IA + F
Sbjct: 1676 RNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRWSHRCPWKAIALVYQEF 1735
Query: 844 AKLAKFVVNNGTSIKFWKDSWCDNQTLQALFPDLYLISERKNATVAECWEGSNQ-AWNLA 903
+K +FVV NG I+FW D W Q L +P L + KNA ++ + +WN
Sbjct: 1736 SKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPISSILGSTRPFSWNFT 1795
Query: 904 FRRGLFDREVSSWMILVEKLSSISLNSEQDDIR-WSLEGSSSYTARSMFQKMIKISPKVS 963
FRR L D E+ L++ + ++S D R WSL S +T +S F + + S
Sbjct: 1796 FRRNLSDSEIEDLEGLMQSFDRLHISSSVPDKRSWSLSSSGLFTVKSFFLALSQYSVSPP 1855
Query: 964 QNLCNLIWKHRSPKKVQVFLWSLAYRSLNTDERIERKFKSWSLSPSACKLCLLLGEDLDH 1023
+W + P KV+ F+W +A++ +NT++ ++ + +LSP CKLC+ GE +DH
Sbjct: 1856 IFPTKFVWNAQVPFKVKSFVWLVAHKKVNTNDLLQLRRPYKALSPDICKLCMKHGETVDH 1915
Query: 1024 LFLHCAFAKKVWFFVANLFGMSFCLPNKIEDWLLEGLAAWNLKKNAKIMAGCAFRAAVWL 1083
LFLHC+ +W + M + P I D L + K ++ A A +W+
Sbjct: 1916 LFLHCSLTIGLWHRLFQSAKMDWVSPRSISDMLASNFNGFGFSKRGIVLWQNACIALMWV 1975
Query: 1084 LWKERNSRTFEDKSASLEF 1101
+W+ERN+R FEDK+ + E+
Sbjct: 1976 VWRERNARIFEDKARNSEY 1994
BLAST of Lcy03g006870 vs. ExPASy TrEMBL
Match:
A5BCI7 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_029474 PE=4 SV=1)
HSP 1 Score: 910.2 bits (2351), Expect = 8.3e-261
Identity = 447/1099 (40.67%), Postives = 657/1099 (59.78%), Query Frame = 0
Query: 4 LLGAFSISIECSFNGQFEGWITGVYGLCTYRERFHFLQELHDIQGLCQGNWCIAGDFNMV 63
+LG+FS+SI+ + NG W++ VYG R F EL DI GL WC+ GDFN++
Sbjct: 748 VLGSFSVSIKFALNGCESLWLSAVYGPNISALRKDFWVELSDIAGLASPRWCVGGDFNVI 807
Query: 64 RWSKERLNATNSVRSMRKFNSFIESYDLIDPPMSNGTFSWSRMGTRVAASRIDRFLISQL 123
R S E+L + SM+ F+ FI +LID P+ + +F+WS M R+DRFL S
Sbjct: 808 RRSSEKLGGSRXTPSMKXFDDFISDCELIDLPLRSASFTWSNMQVNXVCKRLDRFLYSNE 867
Query: 124 WNNTFPELRVERLHRPTSDHSPILMSIGVVKWGPTPFRFENLWIDTPEFKENIEKWWGDL 183
W FP+ L R TSDH PI++ KWGPTPFRFEN+W+ P FKEN +WW +
Sbjct: 868 WEQAFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGRWWREF 927
Query: 184 KPIGWAGFRLMEKLKGLKVLIKEWNKELMAMAINKKATILRKIEVFDKMEEQNAIDASQI 243
+ GW G + M KL+ +K +K WNK +K IL + FD +E++ + +
Sbjct: 928 QGNGWEGHKFMRKLQFVKAKLKVWNKASFGELSKRKEDILSDLVNFDSLEQEGGLSHELL 987
Query: 244 EERKILKAELLDLTVAKQRSINQKCKLKWIQEGDENSSFFHKWASTMRSKAFISMIEKEN 303
+R + K EL +L + ++ QK ++KW++EGD NS FFHK A+ R++ FI +E EN
Sbjct: 988 AQRALKKGELEELILREEIHWRQKARVKWVKEGDCNSRFFHKVANGRRNRKFIKELENEN 1047
Query: 304 GEILTKQEEIEAEILSFYSKFYEKDYDHKFVIEGPDWVPIGDISKSKLEEAFSVEEIYKV 363
G ++ E I+ EIL ++ K Y + +EG DW PI S +LE F+ EEI+K
Sbjct: 1048 GLMMNNSESIKEEILRYFEKLYTSPSGESWRVEGLDWSPISGESAFRLESPFTEEEIFKA 1107
Query: 364 VMDMGSQKSPGPDGMTGEFWKNYWNILKSDLVEVFQEFFQKGIINKRTNETYICLIPKKK 423
+ M K+PGPDG T +++ W ++K DLV+VF EF + GIIN+ TN ++I L+PKK
Sbjct: 1108 IFQMDRDKAPGPDGFTIAVFQDCWEVIKEDLVKVFTEFHRSGIINQSTNASFIVLLPKKS 1167
Query: 424 RALKVKDFRPISLVTSPYKLIAKVLAERLKKVLPNTISDCQAAFVQGRQILDAILVATEA 483
+ ++ DFRPISL+TS YK+IAKVLA R++ VL TI Q AFVQGRQILDA+L+A E
Sbjct: 1168 MSRRISDFRPISLITSLYKIIAKVLAGRIRGVLHETIHSTQGAFVQGRQILDAVLIANEI 1227
Query: 484 VEDIRLRKEKGFLLKLDLEKAYDMVNWDFLDGILELKGFGHKWRRWIKGCLYNTNFSILI 543
V++ R E+G + K+D EKAYD V+WDFLD +LE+KGFG +WR+W++GCL + +F++L+
Sbjct: 1228 VDEKRRSGEEGVVFKIDFEKAYDHVSWDFLDHVLEMKGFGIRWRKWMRGCLSSVSFAVLV 1287
Query: 544 NGRPRGKIMASRGLRQGDPLSPFLFTLVGDAISKSVHYCIEKKILKGWEIGQHKSIVSIL 603
NG +G + ASRGLRQGDPLSPFLFT+V D +S+ + E+ +L+G+++G++++ VS L
Sbjct: 1288 NGNAKGWVKASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLEGFKVGRNRTRVSHL 1347
Query: 604 QYADDTLLFCLANDRDMTKWWDILRMIMRGSGLALNLAKSALIGINVASPQANNLANLLG 663
Q+ADDT+ F + + DM ++L + SGL +NL KS + GIN+ + LA +L
Sbjct: 1348 QFADDTIFFSSSREEDMMTLKNVLLVFGHISGLKVNLDKSNIYGINLEQNHLSRLAEMLD 1407
Query: 664 FQSDSLPINYLGFPLGGNYHRISFWEPLIERFNHKLDSWRKLPISKGGRVTLAQSVLNSL 723
++ PI YLG PLGGN FW+P+IER + +LD W+K +S GGR+TL QS L +
Sbjct: 1408 CKASGWPILYLGLPLGGNPKTSGFWDPVIERISRRLDGWQKAYLSFGGRITLIQSCLTHM 1467
Query: 724 PLYLFSLLKAPKSTINSMEKIVRDFVWSGGCYKQGSNLVKWEWSSLSCFHGGLGVGSLAQ 783
P Y SL K P S +E++ RDF+WSG + +LV W+ GGLG G ++
Sbjct: 1468 PCYFLSLFKIPASVAAKIERMQRDFLWSGVGEGKRDHLVNWDVVCKPKSRGGLGFGKISI 1527
Query: 784 KNFSLMTKWLWRFTQEKKSLWRQIIVSIYGASPEGWSTTPFRGKKGNRIWVDIAANFPTF 843
+N +L+ KWLWR+ +E +LW Q+I+SIYG+ GW W IA + F
Sbjct: 1528 RNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRWSHRCPWKAIALVYQEF 1587
Query: 844 AKLAKFVVNNGTSIKFWKDSWCDNQTLQALFPDLYLISERKNATVAECWEGSNQ-AWNLA 903
+K +FVV NG I+FW D W Q L +P L + KNA ++ + +WN
Sbjct: 1588 SKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPISSILGYTRPFSWNFT 1647
Query: 904 FRRGLFDREVSSWMILVEKLSSISLNSEQDDIR-WSLEGSSSYTARSMFQKMIKISPKVS 963
FRR L D E+ L++ L + ++S D R W L S +T +S F + + S +
Sbjct: 1648 FRRNLSDSEIEDLEGLMQSLDRLHISSSVPDKRSWFLSPSGLFTVKSFFLALSQYSESPT 1707
Query: 964 QNLCNLIWKHRSPKKVQVFLWSLAYRSLNTDERIERKFKSWSLSPSACKLCLLLGEDLDH 1023
+W + P KV+ F+W +A++ +NT++ ++ + +LSP CKLC+ GE +DH
Sbjct: 1708 IFPTKFVWNAQVPFKVKSFVWLVAHKKVNTNDLLQLRRPYKALSPDICKLCMKHGETVDH 1767
Query: 1024 LFLHCAFAKKVWFFVANLFGMSFCLPNKIEDWLLEGLAAWNLKKNAKIMAGCAFRAAVWL 1083
LFLHC+ +W + M + P I D L + K ++ A A +W+
Sbjct: 1768 LFLHCSLTIGLWHRLFQSAKMDWVSPRSISDMLSSNFNGFGFSKRGIVLWQNACIAIMWV 1827
Query: 1084 LWKERNSRTFEDKSASLEF 1101
+W+ERN+R FEDK+ + E+
Sbjct: 1828 VWRERNARIFEDKARNSEY 1846
BLAST of Lcy03g006870 vs. ExPASy TrEMBL
Match:
A0A438FWU5 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_70 PE=4 SV=1)
HSP 1 Score: 905.6 bits (2339), Expect = 2.0e-259
Identity = 460/1100 (41.82%), Postives = 650/1100 (59.09%), Query Frame = 0
Query: 4 LLGAFSISIECSFNGQFEG--WITGVYGLCTYRERFHFLQELHDIQGLCQGNWCIAGDFN 63
+LG+FS++++ FN EG W+T VYG R F EL D+ GL WC+ GDFN
Sbjct: 820 VLGSFSVTVK--FNSGEEGSFWLTSVYGPINPLWRKDFWLELQDLYGLTFPRWCVGGDFN 879
Query: 64 MVRWSKERLNATNSVRSMRKFNSFIESYDLIDPPMSNGTFSWSRMGTRVAASRIDRFLIS 123
++R E+L T +MR F+ FI LIDPP+ N F+WS M R+DRFL S
Sbjct: 880 VIRRISEKLGETRLTLNMRCFDEFIRESGLIDPPLRNAAFTWSNMQADPICKRLDRFLFS 939
Query: 124 QLWNNTFPELRVERLHRPTSDHSPILMSIGVVKWGPTPFRFENLWIDTPEFKENIEKWWG 183
W+ F + E L R TSDHSPI + +KWGPTPFRFEN+W+ PEFKE WW
Sbjct: 940 SEWDTFFSQSFQEALPRWTSDHSPICLETNPLKWGPTPFRFENMWLLHPEFKEKFRVWWL 999
Query: 184 DLKPIGWAGFRLMEKLKGLKVLIKEWNKELMAMAINKKATILRKIEVFDKMEEQNAIDAS 243
+ GW G + M KLK +K +KEWN +K IL + D +E++ +++
Sbjct: 1000 ECTGEGWEGHKFMRKLKFVKSKLKEWNIMTFGDLKERKKLILTDLSRIDLIEQEGNLNSD 1059
Query: 244 QIEERKILKAELLDLTVAKQRSINQKCKLKWIQEGDENSSFFHKWASTMRSKAFISMIEK 303
+ ER + + EL D+ + ++ QK ++KWI+EGD NS FFH+ A+ RS+ FI +
Sbjct: 1060 LVLERTLKRRELEDVLLKEEVQWRQKSRVKWIKEGDCNSKFFHRVATGRRSRKFIKSLIS 1119
Query: 304 ENGEILTKQEEIEAEILSFYSKFYEKDYDHKFVIEGPDWVPIGDISKSKLEEAFSVEEIY 363
E GE L E+I EI++F+ Y K + +EG DWVPI S L+ F+ EE+
Sbjct: 1120 ERGETLNNIEDISEEIVNFFGNLYSKPVGESWRVEGIDWVPISGESGGWLDRPFTEEEVR 1179
Query: 364 KVVMDMGSQKSPGPDGMTGEFWKNYWNILKSDLVEVFQEFFQKGIINKRTNETYICLIPK 423
+ V + +K+PGPDG T ++ W+++K DL+ VF EF G+IN+ TN T+I L+PK
Sbjct: 1180 RAVFQLNKEKAPGPDGFTIAVYQECWDVIKEDLMRVFLEFHTNGVINQSTNATFIALVPK 1239
Query: 424 KKRALKVKDFRPISLVTSPYKLIAKVLAERLKKVLPNTISDCQAAFVQGRQILDAILVAT 483
K +++K+ D+RPISLVTS YK+IAKVL+ RL+KVL TISD Q AFV+GR ILDA+L+A
Sbjct: 1240 KSQSVKISDYRPISLVTSLYKIIAKVLSGRLRKVLHETISDSQGAFVEGRHILDAVLIAN 1299
Query: 484 EAVEDIRLRKEKGFLLKLDLEKAYDMVNWDFLDGILELKGFGHKWRRWIKGCLYNTNFSI 543
E V++ R E+G + K+D EKAYD V+W FLD +L+ KGF KWR WI+GCL +++F+I
Sbjct: 1300 EVVDEKRRSGEEGIVFKIDFEKAYDHVDWGFLDHVLQRKGFSQKWRLWIRGCLSSSSFAI 1359
Query: 544 LINGRPRGKIMASRGLRQGDPLSPFLFTLVGDAISKSVHYCIEKKILKGWEIGQHKSIVS 603
L+NG +G + ASRGLRQGDPLSPFLFTLV D +S+ + E + +G+ +G+ ++ VS
Sbjct: 1360 LVNGNAKGWVKASRGLRQGDPLSPFLFTLVADVLSRMLFRAEETGLTEGFSVGRDRTRVS 1419
Query: 604 ILQYADDTLLFCLANDRDMTKWWDILRMIMRGSGLALNLAKSALIGINVASPQANNLANL 663
+LQ+ADDT+ F A+ + IL + + SGL +NL KS + GIN ++LA++
Sbjct: 1420 LLQFADDTIFFSKASMEHLQNLKIILLVFGQVSGLKINLEKSTISGINTRQELLSSLASV 1479
Query: 664 LGFQSDSLPINYLGFPLGGNYHRISFWEPLIERFNHKLDSWRKLPISKGGRVTLAQSVLN 723
+ P++YLG PLGGN I FW+P++ER + +LD W+K +S GGR+TL QS L+
Sbjct: 1480 FDCRVSEWPLSYLGLPLGGNPKTIGFWDPVVERISRRLDGWKKAYLSLGGRITLIQSCLS 1539
Query: 724 SLPLYLFSLLKAPKSTINSMEKIVRDFVWSGGCYKQGSNLVKWEWSSLSCFHGGLGVGSL 783
+P Y SL K P S + +EK+ R+F+WSG + +LV+WE S GGLG G +
Sbjct: 1540 HIPSYFLSLFKIPASIASKIEKMQRNFLWSGAGEGKKDHLVRWEVVSRPKELGGLGFGKI 1599
Query: 784 AQKNFSLMTKWLWRFTQEKKSLWRQIIVSIYGASPEGWSTTPFRGKKGNRIWVDIAANFP 843
+ +N +L+ KWLWRF +E+ LW ++I SIYG P GW W IA F
Sbjct: 1600 SLRNIALLGKWLWRFPRERSGLWYKVIGSIYGTHPNGWDANMVVRWSHRCPWKAIAQVFQ 1659
Query: 844 TFAKLAKFVVNNGTSIKFWKDSWCDNQTLQALFPDLYLISERKNATVAECWEGS-NQAWN 903
F+ + VV NG I+FW+D W NQ+L + F DLY + KN TV+ S AWN
Sbjct: 1660 EFSPFVRLVVGNGERIRFWEDLWWGNQSLCSQFADLYRVISVKNLTVSNVLGNSFPLAWN 1719
Query: 904 LAFRRGLFDREVSSWMILVEKLSSISLNSEQDDIR-WSLEGSSSYTARSMFQKMIKISPK 963
L FRR L D E+ L+ LSS+ D R WSL S +T +S F + K+S
Sbjct: 1720 LNFRRNLTDSEIDLLQRLMSSLSSVRFFPSLADSRAWSLSSSGLFTVKSFFLALSKVSNP 1779
Query: 964 VSQNLCNLIWKHRSPKKVQVFLWSLAYRSLNTDERIERKFKSWSLSPSACKLCLLLGEDL 1023
+ +W + P KV+ W +A+ +NT+++++ + SL P C LC GE +
Sbjct: 1780 ILFLPAKFLWSSKVPSKVKALAWIVAHGKVNTNDKLQLRRPYKSLCPQWCILCKGNGESI 1839
Query: 1024 DHLFLHCAFAKKVWFFVANLFGMSFCLPNKIEDWLLEGLAAWNLKKNAKIMAGCAFRAAV 1083
DHLFLHC +W + L G+ + P ED L+ K + A V
Sbjct: 1840 DHLFLHCPVTIGLWNKLFKLAGLDWVPPRSFEDMLVIAFKGLGNSLRGKTLWQVACLTLV 1899
Query: 1084 WLLWKERNSRTFEDKSASLE 1100
W++W+ERN R FEDK S E
Sbjct: 1900 WIVWQERNKRIFEDKGRSEE 1917
BLAST of Lcy03g006870 vs. ExPASy TrEMBL
Match:
A0A803P8A0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 897.1 bits (2317), Expect = 7.2e-257
Identity = 454/1111 (40.86%), Postives = 669/1111 (60.22%), Query Frame = 0
Query: 1 MNSLLGAFSISIECSFNGQFEGWITGVYGLCTYRERFHFLQELHDIQGLCQGNWCIAGDF 60
++SL+G FSIS+ + G+ W +GVYG C+Y+ R F EL + +C +WC+ GDF
Sbjct: 82 LDSLVGEFSISVLINAEGKEPWWFSGVYGPCSYKIRHVFWDELAGLSSICGESWCVGGDF 141
Query: 61 NMVRWSKERLNATNSVRSMRKFNSFIESYDLIDPPMSNGTFSWSRMGTRVAASRIDRFLI 120
N+ R E+LN+++S RSM+ F+ I LIDP + NG+F+WS SR+DRFL
Sbjct: 142 NVTRRVGEKLNSSSSTRSMKLFDGLIRELQLIDPKLENGSFTWSNFRAIPICSRLDRFLF 201
Query: 121 SQLWNNTFPELRVERLHRPTSDHSPILMSIGVVKWGPTPFRFENLWIDTPEFKENIEKWW 180
WN FP +R E L R SDHSP+++ KWGP PFRF+N W++ F + E WW
Sbjct: 202 LNNWNVVFPFVRQEMLVRLVSDHSPVVIDSKPPKWGPGPFRFDNHWLEHKSFSKCFESWW 261
Query: 181 GDLKPIGWAGFRLMEKLKGLKVLIKEWNKELMAMAINKKATILRKIEVFDKMEEQNAIDA 240
+ GW G + M+KLK L+ KEW++ K + ++ V D+ E + +
Sbjct: 262 QEEIIDGWPGTKFMKKLKTLQGKAKEWSRFTYGQNKATKNALEGRLGVLDRQEGTPSWNQ 321
Query: 241 SQIEERKILKAELLDLTVAKQRSINQKCKLKWIQEGDENSSFFHKWASTMRSKAFISMIE 300
S +ER+ LK E LT ++RSI K K KW +EGD NS FFH + +++ IS IE
Sbjct: 322 SLYDERRKLKEEWQRLTFEEERSIWLKSKCKWAKEGDANSRFFHNLLNARKARNTISRIE 381
Query: 301 KENGEILTKQEEIEAEILSFYSKFYEKDYDHKFVIEGPDWVPIGDISKSKLEEAFSVEEI 360
++NG+I+ ++EI E+++F+SK Y + +EG +W I + S +LE F +E+
Sbjct: 382 RDNGDIIDSEKEIVEELIAFFSKLYTSETRMGTGVEGIEWQHIAEPSARQLECPFEEDEV 441
Query: 361 YKVVMDMGSQKSPGPDGMTGEFWKNYWNILKSDLVEVFQEFFQKGIINKRTNETYICLIP 420
+V K+PGPDG + ++N W ++K++L+EVF+ F +G I N+T+ICLIP
Sbjct: 442 RNIVFSCEGSKAPGPDGFSLAVFQNNWEVIKNELMEVFRAFHSEGRIEGSINDTFICLIP 501
Query: 421 KKKRALKVKDFRPISLVTSPYKLIAKVLAERLKKVLPNTISDCQAAFVQGRQILDAILVA 480
K+ + KVKDFRPISL+TS YK+IAK LA RL+ VL TIS+ Q+AFV+GRQILD++L+A
Sbjct: 502 KRLNSCKVKDFRPISLITSVYKIIAKTLATRLRGVLGETISETQSAFVEGRQILDSVLLA 561
Query: 481 TEAVEDIRLRKEKGFLLKLDLEKAYDMVNWDFLDGILELKGFGHKWRRWIKGCLYNTNFS 540
EAVED R R +KGF+LK+D EKAYD V+W FLD +L KGFG +WR+WI+GC+ +T+FS
Sbjct: 562 NEAVEDYRSRGKKGFVLKIDFEKAYDRVDWGFLDLVLRKKGFGERWRKWIRGCVSSTSFS 621
Query: 541 ILINGRPRGKIMASRGLRQGDPLSPFLFTLVGDAISKSVHYCIEKKILKGWEIGQHKSIV 600
I +NGR RGK SRGLRQGDPLSPFLFTLV D + + V +E + G++IG+ +
Sbjct: 622 IFVNGRVRGKFHGSRGLRQGDPLSPFLFTLVADVLGRMVDKAVETEAFSGFQIGKDNIRL 681
Query: 601 SILQYADDTLLFCLANDRDMTKWWDILRMIMRGSGLALNLAKSALIGINVASPQANNLAN 660
S LQ+ADDTL F + ++ + K I+ SGL +NL KS L+GI ++ AN
Sbjct: 682 SHLQFADDTLFF-VKDEDSLQKLVKIVEAFCGISGLKVNLNKSQLLGICLSDEAVAQGAN 741
Query: 661 LLGFQSDSLPINYLGFPLGGNYHRISFWEPLIERFNHKLDSWRKLPISKGGRVTLAQSVL 720
L+G + P+ YLG PLGG+ + +FWEP++++ ++D W+ +S+GGR+TL QSVL
Sbjct: 742 LIGCEVGKWPMTYLGMPLGGSPRKKTFWEPVLDKCAKRMDGWKCSFLSRGGRLTLIQSVL 801
Query: 721 NSLPLYLFSLLKAPKSTINSMEKIVRDFVWSGGCYKQGSNLVKWEWSSLSCFHGGLGVGS 780
+SLP+Y SL K PK + +EK++RDF W GG G +LV W+ GGL +G
Sbjct: 802 SSLPIYYLSLFKVPKMVLKELEKMMRDFFWEGGDLAGGDHLVAWDEVCKPRAEGGLAIGR 861
Query: 781 LAQKNFSLMTKWLWRFTQEKKSLWRQIIVSIYGASPEGWSTTPFRGKKGNRI-----WVD 840
L +N L+ KWLWRF E SLW ++I S YG + W T K+G R+ W+D
Sbjct: 862 LEMRNKGLLMKWLWRFPLESNSLWHKVIKSRYGKADNFWDT-----KQGVRMSPRGPWMD 921
Query: 841 IAANFPTFAKLAKFVVNNGTSIKFWKDSWCDNQTLQALFPDLYLISERKNATVAECWEGS 900
IA + + K+ KF V NG SI+FW+D W +L+ FP L ++S KNA++ E +
Sbjct: 922 IADLYHEYGKMVKFKVGNGASIRFWEDEWIGGPSLRDQFPTLAVLSRAKNASIQEMIGDA 981
Query: 901 NQ------AWNLAFRRGLFDREVSSWMILVEKLSSISLNSEQDDIR-WSLEGSSSYTARS 960
+ +W+ FRR + DRE+ S L++KL + + S DD R W + ++++S
Sbjct: 982 GEVGDCVASWDFKFRRNIMDREIPSLTQLIQKLEHVRVLSILDDSRIWLPDSCGIFSSKS 1041
Query: 961 MFQKMIKISPKVSQNLCNLIWKHRSPKKVQVFLWSLAYRSLNTDERIERKFKSWSLSPSA 1020
F + ++WK+R P KV+VF W +A LN R+++K +SP
Sbjct: 1042 AFSWFTATKDSNEMSWTKILWKNRGPSKVKVFGWLVALDKLNLHARLQKKRPFLCISPGW 1101
Query: 1021 CKLCLLLGEDLDHLFLHCAFAKKVWFFVANLFGMSFCLPNKIEDWLLEGLAAWNLKKNAK 1080
C C + GED HLFL C+ A+ +W + N F + + +P + L+ + + N +
Sbjct: 1102 CVCCKISGEDNAHLFLSCSLARSLWIMLINEFEIQWAMPCSVPCMLVSKVGSSN---RST 1161
Query: 1081 IMAGCAFRAAVWLLWKERNSRTFEDKSASLE 1100
+ A + +W++W ERN+RTFE + S+E
Sbjct: 1162 SLWRTAVLSVLWVVWLERNNRTFEGAACSIE 1183
BLAST of Lcy03g006870 vs. ExPASy TrEMBL
Match:
A5BPI6 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_008538 PE=4 SV=1)
HSP 1 Score: 896.0 bits (2314), Expect = 1.6e-256
Identity = 445/1098 (40.53%), Postives = 650/1098 (59.20%), Query Frame = 0
Query: 4 LLGAFSISIECSFNGQFEGWITGVYGLCTYRERFHFLQELHDIQGLCQGNWCIAGDFNMV 63
+LG+FS+S++ + +G + W + VYG + R F EL DI GL WC+ GDFN++
Sbjct: 196 VLGSFSVSVKFAVDGSEQFWXSAVYGPNSTALRKDFWVELSDIFGLSSPCWCVGGDFNVI 255
Query: 64 RWSKERLNATNSVRSMRKFNSFIESYDLIDPPMSNGTFSWSRMGTRVAASRIDRFLISQL 123
R E+L SM+ + FI +LIDPP+ + +F+WS M R+DRFL S
Sbjct: 256 RRCSEKLGGGRLTPSMKDLDDFIRENELIDPPLRSASFTWSNMQEHPVCKRLDRFLYSNE 315
Query: 124 WNNTFPELRVERLHRPTSDHSPILMSIGVVKWGPTPFRFENLWIDTPEFKENIEKWWGDL 183
W FP+ E L R TSDH PI++ KWGPTPFRFEN+W+ P FKE +WW +
Sbjct: 316 WEQLFPQSLQEVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLHHPSFKECFGRWWREF 375
Query: 184 KPIGWAGFRLMEKLKGLKVLIKEWNKELMAMAINKKATILRKIEVFDKMEEQNAIDASQI 243
+ GW G + M KL+ LK +KEWNK I +K IL I FD ME++ + +
Sbjct: 376 QGDGWEGHKFMRKLQFLKAKLKEWNKNAFGDLIERKKCILLDIANFDSMEQEGGLSPELL 435
Query: 244 EERKILKAELLDLTVAKQRSINQKCKLKWIQEGDENSSFFHKWASTMRSKAFISMIEKEN 303
+R + K EL +L + ++ QK ++KW++EGD NS FHK A+ R++ FI ++E E
Sbjct: 436 IQRAVRKGELEELILREEIHWRQKARVKWVKEGDCNSKXFHKVANGRRNRKFIKVLENER 495
Query: 304 GEILTKQEEIEAEILSFYSKFYEKDYDHKFVIEGPDWVPIGDISKSKLEEAFSVEEIYKV 363
G +L + I+ EIL ++ K Y + +EG DW PI S S+LE F+ EEIYK
Sbjct: 496 GLVLDNSDSIKEEILRYFEKLYASPSGESWRVEGLDWSPISRESASRLESPFTEEEIYKA 555
Query: 364 VMDMGSQKSPGPDGMTGEFWKNYWNILKSDLVEVFQEFFQKGIINKRTNETYICLIPKKK 423
+ M +PGPDG T +++ W+++K DLV VF EF + GIIN+ TN ++I L+PKK
Sbjct: 556 IFQMDRDXAPGPDGFTIAVFQDCWDVIKEDLVRVFDEFHRSGIINQSTNASFIVLLPKKS 615
Query: 424 RALKVKDFRPISLVTSPYKLIAKVLAERLKKVLPNTISDCQAAFVQGRQILDAILVATEA 483
A K+ ++RPISL+TS YK+IAKVLA RL+ +L TI Q AFVQGRQILDA+L+A E
Sbjct: 616 MAKKISNYRPISLITSLYKIIAKVLAGRLRGILHETIHSTQGAFVQGRQILDAVLIANEI 675
Query: 484 VEDIRLRKEKGFLLKLDLEKAYDMVNWDFLDGILELKGFGHKWRRWIKGCLYNTNFSILI 543
V++ + E+G + K+D EKAYD V+WDFLD ++E KGF R+WI+ CL + +F+IL+
Sbjct: 676 VDEKKRSGEEGVVFKIDFEKAYDHVSWDFLDHVMEKKGFNPXXRKWIRXCLSSVSFAILV 735
Query: 544 NGRPRGKIMASRGLRQGDPLSPFLFTLVGDAISKSVHYCIEKKILKGWEIGQHKSIVSIL 603
NG +G + RGLRQGDPLSPFLFT+V D S + E+ + +G+ +G++++ VS L
Sbjct: 736 NGNAKGWVKXXRGLRQGDPLSPFLFTIVADVXSXMLLRAEERNVFEGFRVGRNRTRVSHL 795
Query: 604 QYADDTLLFCLANDRDMTKWWDILRMIMRGSGLALNLAKSALIGINVASPQANNLANLLG 663
Q+ADDT+ F + D+ +L + SGL +NL KS + GIN+ + LA LL
Sbjct: 796 QFADDTIFFSSTREEDLLTLKSVLXVFGHISGLKVNLDKSNIYGINLGQDHLHRLAELLD 855
Query: 664 FQSDSLPINYLGFPLGGNYHRISFWEPLIERFNHKLDSWRKLPISKGGRVTLAQSVLNSL 723
++ PI YLG PLGGN SFW+P+IER + +LD W+K +S GGR+TL QS L +
Sbjct: 856 CKASGWPILYLGLPLGGNPKSGSFWDPVIERISSRLDGWQKAYLSFGGRITLIQSCLTHM 915
Query: 724 PLYLFSLLKAPKSTINSMEKIVRDFVWSGGCYKQGSNLVKWEWSSLSCFHGGLGVGSLAQ 783
P Y SL K P S +E++ RDF+WSG + +LV W+ S GGLG+G ++
Sbjct: 916 PCYFLSLFKIPASVAGRIERLQRDFLWSGVGEGKRDHLVSWBVVCKSKMKGGLGLGRISL 975
Query: 784 KNFSLMTKWLWRFTQEKKSLWRQIIVSIYGASPEGWSTTPFRGKKGNRIWVDIAANFPTF 843
+N +L+ KWLWR+ +E +LW Q+I+SIYG+ GW W IA F F
Sbjct: 976 RNSALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDANTXVRWSHRCPWKAIAQVFQDF 1035
Query: 844 AKLAKFVVNNGTSIKFWKDSWCDNQTLQALFPDLYLISERKNATVAECWEGSNQ-AWNLA 903
+K +F+V +G I+FW+D W +Q+L FP L + KN ++ + +WN
Sbjct: 1036 SKFTRFIVGDGDRIRFWEDLWWGDQSLGVRFPRLLRVVMDKNILISSILGSTRPFSWNFN 1095
Query: 904 FRRGLFDREVSSWMILVEKLSSISLNSEQDDIR-WSLEGSSSYTARSMFQKMIKISPKVS 963
FRR L D E+ L++ L I L+ D R WSL S +T +S F + +IS S
Sbjct: 1096 FRRNLSDSEIEKVESLMQSLDHIHLSPSVPDKRSWSLSSSGLFTVKSFFLALSQISGLPS 1155
Query: 964 QNLCNLIWKHRSPKKVQVFLWSLAYRSLNTDERIERKFKSWSLSPSACKLCLLLGEDLDH 1023
L+W + P K++ F+W +A++ +NT++ ++ + +LSP C LC+ GE +DH
Sbjct: 1156 VFPTKLVWNSQVPFKIKFFVWLVAHKKVNTNDMLQLRRPYKALSPDICMLCMERGETVDH 1215
Query: 1024 LFLHCAFAKKVWFFVANLFGMSFCLPNKIEDWLLEGLAAWNLKKNAKIMAGCAFRAAVWL 1083
LFLHC+ +W + L + + P + D + + K ++ A A +W+
Sbjct: 1216 LFLHCSMTMGLWHRLFQLTKIDWVPPRSVFDMISINFNGFGSSKRGIVLWQAACIAILWV 1275
Query: 1084 LWKERNSRTFEDKSASLE 1100
+W+ERN+R FEDKS + E
Sbjct: 1276 VWRERNARIFEDKSRNSE 1293
BLAST of Lcy03g006870 vs. NCBI nr
Match:
RVW70235.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])
HSP 1 Score: 913.3 bits (2359), Expect = 2.0e-261
Identity = 447/1099 (40.67%), Postives = 657/1099 (59.78%), Query Frame = 0
Query: 4 LLGAFSISIECSFNGQFEGWITGVYGLCTYRERFHFLQELHDIQGLCQGNWCIAGDFNMV 63
+LG+FS+SI+ + NG W++ VYG R EL DI GL WC+ GDFN++
Sbjct: 896 MLGSFSVSIKFTLNGCESLWLSAVYGPNNSALRKDLWVELSDIAGLASPRWCVGGDFNVI 955
Query: 64 RWSKERLNATNSVRSMRKFNSFIESYDLIDPPMSNGTFSWSRMGTRVAASRIDRFLISQL 123
R S E+L + SM+ F+ FI +LID P+ + +F+WS M R+DRFL S
Sbjct: 956 RRSSEKLGGSRLTPSMKDFDDFISDCELIDLPLRSASFTWSNMQVNPVCKRLDRFLYSNE 1015
Query: 124 WNNTFPELRVERLHRPTSDHSPILMSIGVVKWGPTPFRFENLWIDTPEFKENIEKWWGDL 183
W TFP+ L R TSDH PI++ KWGPTPFRFEN+W+ P FKEN +WW +
Sbjct: 1016 WEQTFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGRWWREF 1075
Query: 184 KPIGWAGFRLMEKLKGLKVLIKEWNKELMAMAINKKATILRKIEVFDKMEEQNAIDASQI 243
+ GW G + M KL+ +K +K WNK +K IL + FD +E++ + +
Sbjct: 1076 QGNGWEGHKFMRKLQFVKAKLKVWNKASFGELSKRKEDILSALVNFDSLEQEGGLSHELL 1135
Query: 244 EERKILKAELLDLTVAKQRSINQKCKLKWIQEGDENSSFFHKWASTMRSKAFISMIEKEN 303
+R I K EL +L + ++ QK ++KW++EGD NS FFHK A+ R++ FI +E EN
Sbjct: 1136 AQRAIKKGELEELILREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKFIKELENEN 1195
Query: 304 GEILTKQEEIEAEILSFYSKFYEKDYDHKFVIEGPDWVPIGDISKSKLEEAFSVEEIYKV 363
G+++ E I+ EIL ++ K Y + +EG DW PI S +LE F+ EEI K
Sbjct: 1196 GQMMNNSESIKEEILRYFEKLYTSPSGESWRVEGLDWSPISGESAVRLESPFTEEEICKA 1255
Query: 364 VMDMGSQKSPGPDGMTGEFWKNYWNILKSDLVEVFQEFFQKGIINKRTNETYICLIPKKK 423
+ M K+PGPDG T +++ W ++K DLV+VF EF + GIIN+ TN ++I L+PKK
Sbjct: 1256 IFQMDRDKAPGPDGFTIAVFQDCWEVIKEDLVKVFTEFHRSGIINQSTNASFIVLLPKKS 1315
Query: 424 RALKVKDFRPISLVTSPYKLIAKVLAERLKKVLPNTISDCQAAFVQGRQILDAILVATEA 483
+ ++ DFRPISL+TS YK+IAKVLA R+++VL TI Q AFVQGRQILDA+L+A E
Sbjct: 1316 MSRRISDFRPISLITSLYKIIAKVLAGRIREVLHETIHSTQGAFVQGRQILDAVLIANEI 1375
Query: 484 VEDIRLRKEKGFLLKLDLEKAYDMVNWDFLDGILELKGFGHKWRRWIKGCLYNTNFSILI 543
V++ R E+G + K+D EKAYD V+WDFLD ++E+KGFG +WR+W++GCL + +F++L+
Sbjct: 1376 VDEKRRSGEEGVVFKIDFEKAYDHVSWDFLDHVMEMKGFGIRWRKWMRGCLSSVSFAVLV 1435
Query: 544 NGRPRGKIMASRGLRQGDPLSPFLFTLVGDAISKSVHYCIEKKILKGWEIGQHKSIVSIL 603
NG +G + ASRGLRQGDPLSPFLFT+V D +S+ + E+ +L+G+++G++++ VS L
Sbjct: 1436 NGNAKGWVKASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLEGFKVGRNRTRVSHL 1495
Query: 604 QYADDTLLFCLANDRDMTKWWDILRMIMRGSGLALNLAKSALIGINVASPQANNLANLLG 663
Q+ADDT+ F + + DM ++L + SGL +NL KS + GIN+ + LA +L
Sbjct: 1496 QFADDTIFFSSSREEDMMTLKNVLLVFGHISGLKVNLDKSNIYGINLEQNHLSRLAEMLD 1555
Query: 664 FQSDSLPINYLGFPLGGNYHRISFWEPLIERFNHKLDSWRKLPISKGGRVTLAQSVLNSL 723
++ PI YLG PLGGN FW+P+IER + +LD W+K +S GGR+TL QS L +
Sbjct: 1556 CKASGWPILYLGLPLGGNPKTSGFWDPVIERISRRLDGWQKAYLSFGGRITLIQSCLTHM 1615
Query: 724 PLYLFSLLKAPKSTINSMEKIVRDFVWSGGCYKQGSNLVKWEWSSLSCFHGGLGVGSLAQ 783
P Y SL K P S +E++ RDF+WSG + +LV W+ GGLG G ++
Sbjct: 1616 PCYFLSLFKIPASVAAKIERMQRDFLWSGVGEGKRDHLVNWDVVCKPKSRGGLGFGKISI 1675
Query: 784 KNFSLMTKWLWRFTQEKKSLWRQIIVSIYGASPEGWSTTPFRGKKGNRIWVDIAANFPTF 843
+N +L+ KWLWR+ +E +LW Q+I+SIYG+ GW W IA + F
Sbjct: 1676 RNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRWSHRCPWKAIALVYQEF 1735
Query: 844 AKLAKFVVNNGTSIKFWKDSWCDNQTLQALFPDLYLISERKNATVAECWEGSNQ-AWNLA 903
+K +FVV NG I+FW D W Q L +P L + KNA ++ + +WN
Sbjct: 1736 SKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPISSILGSTRPFSWNFT 1795
Query: 904 FRRGLFDREVSSWMILVEKLSSISLNSEQDDIR-WSLEGSSSYTARSMFQKMIKISPKVS 963
FRR L D E+ L++ + ++S D R WSL S +T +S F + + S
Sbjct: 1796 FRRNLSDSEIEDLEGLMQSFDRLHISSSVPDKRSWSLSSSGLFTVKSFFLALSQYSVSPP 1855
Query: 964 QNLCNLIWKHRSPKKVQVFLWSLAYRSLNTDERIERKFKSWSLSPSACKLCLLLGEDLDH 1023
+W + P KV+ F+W +A++ +NT++ ++ + +LSP CKLC+ GE +DH
Sbjct: 1856 IFPTKFVWNAQVPFKVKSFVWLVAHKKVNTNDLLQLRRPYKALSPDICKLCMKHGETVDH 1915
Query: 1024 LFLHCAFAKKVWFFVANLFGMSFCLPNKIEDWLLEGLAAWNLKKNAKIMAGCAFRAAVWL 1083
LFLHC+ +W + M + P I D L + K ++ A A +W+
Sbjct: 1916 LFLHCSLTIGLWHRLFQSAKMDWVSPRSISDMLASNFNGFGFSKRGIVLWQNACIALMWV 1975
Query: 1084 LWKERNSRTFEDKSASLEF 1101
+W+ERN+R FEDK+ + E+
Sbjct: 1976 VWRERNARIFEDKARNSEY 1994
BLAST of Lcy03g006870 vs. NCBI nr
Match:
CAN65484.1 (hypothetical protein VITISV_029474 [Vitis vinifera])
HSP 1 Score: 910.2 bits (2351), Expect = 1.7e-260
Identity = 447/1099 (40.67%), Postives = 657/1099 (59.78%), Query Frame = 0
Query: 4 LLGAFSISIECSFNGQFEGWITGVYGLCTYRERFHFLQELHDIQGLCQGNWCIAGDFNMV 63
+LG+FS+SI+ + NG W++ VYG R F EL DI GL WC+ GDFN++
Sbjct: 748 VLGSFSVSIKFALNGCESLWLSAVYGPNISALRKDFWVELSDIAGLASPRWCVGGDFNVI 807
Query: 64 RWSKERLNATNSVRSMRKFNSFIESYDLIDPPMSNGTFSWSRMGTRVAASRIDRFLISQL 123
R S E+L + SM+ F+ FI +LID P+ + +F+WS M R+DRFL S
Sbjct: 808 RRSSEKLGGSRXTPSMKXFDDFISDCELIDLPLRSASFTWSNMQVNXVCKRLDRFLYSNE 867
Query: 124 WNNTFPELRVERLHRPTSDHSPILMSIGVVKWGPTPFRFENLWIDTPEFKENIEKWWGDL 183
W FP+ L R TSDH PI++ KWGPTPFRFEN+W+ P FKEN +WW +
Sbjct: 868 WEQAFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFKENFGRWWREF 927
Query: 184 KPIGWAGFRLMEKLKGLKVLIKEWNKELMAMAINKKATILRKIEVFDKMEEQNAIDASQI 243
+ GW G + M KL+ +K +K WNK +K IL + FD +E++ + +
Sbjct: 928 QGNGWEGHKFMRKLQFVKAKLKVWNKASFGELSKRKEDILSDLVNFDSLEQEGGLSHELL 987
Query: 244 EERKILKAELLDLTVAKQRSINQKCKLKWIQEGDENSSFFHKWASTMRSKAFISMIEKEN 303
+R + K EL +L + ++ QK ++KW++EGD NS FFHK A+ R++ FI +E EN
Sbjct: 988 AQRALKKGELEELILREEIHWRQKARVKWVKEGDCNSRFFHKVANGRRNRKFIKELENEN 1047
Query: 304 GEILTKQEEIEAEILSFYSKFYEKDYDHKFVIEGPDWVPIGDISKSKLEEAFSVEEIYKV 363
G ++ E I+ EIL ++ K Y + +EG DW PI S +LE F+ EEI+K
Sbjct: 1048 GLMMNNSESIKEEILRYFEKLYTSPSGESWRVEGLDWSPISGESAFRLESPFTEEEIFKA 1107
Query: 364 VMDMGSQKSPGPDGMTGEFWKNYWNILKSDLVEVFQEFFQKGIINKRTNETYICLIPKKK 423
+ M K+PGPDG T +++ W ++K DLV+VF EF + GIIN+ TN ++I L+PKK
Sbjct: 1108 IFQMDRDKAPGPDGFTIAVFQDCWEVIKEDLVKVFTEFHRSGIINQSTNASFIVLLPKKS 1167
Query: 424 RALKVKDFRPISLVTSPYKLIAKVLAERLKKVLPNTISDCQAAFVQGRQILDAILVATEA 483
+ ++ DFRPISL+TS YK+IAKVLA R++ VL TI Q AFVQGRQILDA+L+A E
Sbjct: 1168 MSRRISDFRPISLITSLYKIIAKVLAGRIRGVLHETIHSTQGAFVQGRQILDAVLIANEI 1227
Query: 484 VEDIRLRKEKGFLLKLDLEKAYDMVNWDFLDGILELKGFGHKWRRWIKGCLYNTNFSILI 543
V++ R E+G + K+D EKAYD V+WDFLD +LE+KGFG +WR+W++GCL + +F++L+
Sbjct: 1228 VDEKRRSGEEGVVFKIDFEKAYDHVSWDFLDHVLEMKGFGIRWRKWMRGCLSSVSFAVLV 1287
Query: 544 NGRPRGKIMASRGLRQGDPLSPFLFTLVGDAISKSVHYCIEKKILKGWEIGQHKSIVSIL 603
NG +G + ASRGLRQGDPLSPFLFT+V D +S+ + E+ +L+G+++G++++ VS L
Sbjct: 1288 NGNAKGWVKASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLEGFKVGRNRTRVSHL 1347
Query: 604 QYADDTLLFCLANDRDMTKWWDILRMIMRGSGLALNLAKSALIGINVASPQANNLANLLG 663
Q+ADDT+ F + + DM ++L + SGL +NL KS + GIN+ + LA +L
Sbjct: 1348 QFADDTIFFSSSREEDMMTLKNVLLVFGHISGLKVNLDKSNIYGINLEQNHLSRLAEMLD 1407
Query: 664 FQSDSLPINYLGFPLGGNYHRISFWEPLIERFNHKLDSWRKLPISKGGRVTLAQSVLNSL 723
++ PI YLG PLGGN FW+P+IER + +LD W+K +S GGR+TL QS L +
Sbjct: 1408 CKASGWPILYLGLPLGGNPKTSGFWDPVIERISRRLDGWQKAYLSFGGRITLIQSCLTHM 1467
Query: 724 PLYLFSLLKAPKSTINSMEKIVRDFVWSGGCYKQGSNLVKWEWSSLSCFHGGLGVGSLAQ 783
P Y SL K P S +E++ RDF+WSG + +LV W+ GGLG G ++
Sbjct: 1468 PCYFLSLFKIPASVAAKIERMQRDFLWSGVGEGKRDHLVNWDVVCKPKSRGGLGFGKISI 1527
Query: 784 KNFSLMTKWLWRFTQEKKSLWRQIIVSIYGASPEGWSTTPFRGKKGNRIWVDIAANFPTF 843
+N +L+ KWLWR+ +E +LW Q+I+SIYG+ GW W IA + F
Sbjct: 1528 RNVALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNIVRWSHRCPWKAIALVYQEF 1587
Query: 844 AKLAKFVVNNGTSIKFWKDSWCDNQTLQALFPDLYLISERKNATVAECWEGSNQ-AWNLA 903
+K +FVV NG I+FW D W Q L +P L + KNA ++ + +WN
Sbjct: 1588 SKFTRFVVGNGDRIRFWDDLWWGEQPLGVQYPRLLRVVTDKNAPISSILGYTRPFSWNFT 1647
Query: 904 FRRGLFDREVSSWMILVEKLSSISLNSEQDDIR-WSLEGSSSYTARSMFQKMIKISPKVS 963
FRR L D E+ L++ L + ++S D R W L S +T +S F + + S +
Sbjct: 1648 FRRNLSDSEIEDLEGLMQSLDRLHISSSVPDKRSWFLSPSGLFTVKSFFLALSQYSESPT 1707
Query: 964 QNLCNLIWKHRSPKKVQVFLWSLAYRSLNTDERIERKFKSWSLSPSACKLCLLLGEDLDH 1023
+W + P KV+ F+W +A++ +NT++ ++ + +LSP CKLC+ GE +DH
Sbjct: 1708 IFPTKFVWNAQVPFKVKSFVWLVAHKKVNTNDLLQLRRPYKALSPDICKLCMKHGETVDH 1767
Query: 1024 LFLHCAFAKKVWFFVANLFGMSFCLPNKIEDWLLEGLAAWNLKKNAKIMAGCAFRAAVWL 1083
LFLHC+ +W + M + P I D L + K ++ A A +W+
Sbjct: 1768 LFLHCSLTIGLWHRLFQSAKMDWVSPRSISDMLSSNFNGFGFSKRGIVLWQNACIAIMWV 1827
Query: 1084 LWKERNSRTFEDKSASLEF 1101
+W+ERN+R FEDK+ + E+
Sbjct: 1828 VWRERNARIFEDKARNSEY 1846
BLAST of Lcy03g006870 vs. NCBI nr
Match:
RVW64408.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])
HSP 1 Score: 905.6 bits (2339), Expect = 4.2e-259
Identity = 460/1100 (41.82%), Postives = 650/1100 (59.09%), Query Frame = 0
Query: 4 LLGAFSISIECSFNGQFEG--WITGVYGLCTYRERFHFLQELHDIQGLCQGNWCIAGDFN 63
+LG+FS++++ FN EG W+T VYG R F EL D+ GL WC+ GDFN
Sbjct: 820 VLGSFSVTVK--FNSGEEGSFWLTSVYGPINPLWRKDFWLELQDLYGLTFPRWCVGGDFN 879
Query: 64 MVRWSKERLNATNSVRSMRKFNSFIESYDLIDPPMSNGTFSWSRMGTRVAASRIDRFLIS 123
++R E+L T +MR F+ FI LIDPP+ N F+WS M R+DRFL S
Sbjct: 880 VIRRISEKLGETRLTLNMRCFDEFIRESGLIDPPLRNAAFTWSNMQADPICKRLDRFLFS 939
Query: 124 QLWNNTFPELRVERLHRPTSDHSPILMSIGVVKWGPTPFRFENLWIDTPEFKENIEKWWG 183
W+ F + E L R TSDHSPI + +KWGPTPFRFEN+W+ PEFKE WW
Sbjct: 940 SEWDTFFSQSFQEALPRWTSDHSPICLETNPLKWGPTPFRFENMWLLHPEFKEKFRVWWL 999
Query: 184 DLKPIGWAGFRLMEKLKGLKVLIKEWNKELMAMAINKKATILRKIEVFDKMEEQNAIDAS 243
+ GW G + M KLK +K +KEWN +K IL + D +E++ +++
Sbjct: 1000 ECTGEGWEGHKFMRKLKFVKSKLKEWNIMTFGDLKERKKLILTDLSRIDLIEQEGNLNSD 1059
Query: 244 QIEERKILKAELLDLTVAKQRSINQKCKLKWIQEGDENSSFFHKWASTMRSKAFISMIEK 303
+ ER + + EL D+ + ++ QK ++KWI+EGD NS FFH+ A+ RS+ FI +
Sbjct: 1060 LVLERTLKRRELEDVLLKEEVQWRQKSRVKWIKEGDCNSKFFHRVATGRRSRKFIKSLIS 1119
Query: 304 ENGEILTKQEEIEAEILSFYSKFYEKDYDHKFVIEGPDWVPIGDISKSKLEEAFSVEEIY 363
E GE L E+I EI++F+ Y K + +EG DWVPI S L+ F+ EE+
Sbjct: 1120 ERGETLNNIEDISEEIVNFFGNLYSKPVGESWRVEGIDWVPISGESGGWLDRPFTEEEVR 1179
Query: 364 KVVMDMGSQKSPGPDGMTGEFWKNYWNILKSDLVEVFQEFFQKGIINKRTNETYICLIPK 423
+ V + +K+PGPDG T ++ W+++K DL+ VF EF G+IN+ TN T+I L+PK
Sbjct: 1180 RAVFQLNKEKAPGPDGFTIAVYQECWDVIKEDLMRVFLEFHTNGVINQSTNATFIALVPK 1239
Query: 424 KKRALKVKDFRPISLVTSPYKLIAKVLAERLKKVLPNTISDCQAAFVQGRQILDAILVAT 483
K +++K+ D+RPISLVTS YK+IAKVL+ RL+KVL TISD Q AFV+GR ILDA+L+A
Sbjct: 1240 KSQSVKISDYRPISLVTSLYKIIAKVLSGRLRKVLHETISDSQGAFVEGRHILDAVLIAN 1299
Query: 484 EAVEDIRLRKEKGFLLKLDLEKAYDMVNWDFLDGILELKGFGHKWRRWIKGCLYNTNFSI 543
E V++ R E+G + K+D EKAYD V+W FLD +L+ KGF KWR WI+GCL +++F+I
Sbjct: 1300 EVVDEKRRSGEEGIVFKIDFEKAYDHVDWGFLDHVLQRKGFSQKWRLWIRGCLSSSSFAI 1359
Query: 544 LINGRPRGKIMASRGLRQGDPLSPFLFTLVGDAISKSVHYCIEKKILKGWEIGQHKSIVS 603
L+NG +G + ASRGLRQGDPLSPFLFTLV D +S+ + E + +G+ +G+ ++ VS
Sbjct: 1360 LVNGNAKGWVKASRGLRQGDPLSPFLFTLVADVLSRMLFRAEETGLTEGFSVGRDRTRVS 1419
Query: 604 ILQYADDTLLFCLANDRDMTKWWDILRMIMRGSGLALNLAKSALIGINVASPQANNLANL 663
+LQ+ADDT+ F A+ + IL + + SGL +NL KS + GIN ++LA++
Sbjct: 1420 LLQFADDTIFFSKASMEHLQNLKIILLVFGQVSGLKINLEKSTISGINTRQELLSSLASV 1479
Query: 664 LGFQSDSLPINYLGFPLGGNYHRISFWEPLIERFNHKLDSWRKLPISKGGRVTLAQSVLN 723
+ P++YLG PLGGN I FW+P++ER + +LD W+K +S GGR+TL QS L+
Sbjct: 1480 FDCRVSEWPLSYLGLPLGGNPKTIGFWDPVVERISRRLDGWKKAYLSLGGRITLIQSCLS 1539
Query: 724 SLPLYLFSLLKAPKSTINSMEKIVRDFVWSGGCYKQGSNLVKWEWSSLSCFHGGLGVGSL 783
+P Y SL K P S + +EK+ R+F+WSG + +LV+WE S GGLG G +
Sbjct: 1540 HIPSYFLSLFKIPASIASKIEKMQRNFLWSGAGEGKKDHLVRWEVVSRPKELGGLGFGKI 1599
Query: 784 AQKNFSLMTKWLWRFTQEKKSLWRQIIVSIYGASPEGWSTTPFRGKKGNRIWVDIAANFP 843
+ +N +L+ KWLWRF +E+ LW ++I SIYG P GW W IA F
Sbjct: 1600 SLRNIALLGKWLWRFPRERSGLWYKVIGSIYGTHPNGWDANMVVRWSHRCPWKAIAQVFQ 1659
Query: 844 TFAKLAKFVVNNGTSIKFWKDSWCDNQTLQALFPDLYLISERKNATVAECWEGS-NQAWN 903
F+ + VV NG I+FW+D W NQ+L + F DLY + KN TV+ S AWN
Sbjct: 1660 EFSPFVRLVVGNGERIRFWEDLWWGNQSLCSQFADLYRVISVKNLTVSNVLGNSFPLAWN 1719
Query: 904 LAFRRGLFDREVSSWMILVEKLSSISLNSEQDDIR-WSLEGSSSYTARSMFQKMIKISPK 963
L FRR L D E+ L+ LSS+ D R WSL S +T +S F + K+S
Sbjct: 1720 LNFRRNLTDSEIDLLQRLMSSLSSVRFFPSLADSRAWSLSSSGLFTVKSFFLALSKVSNP 1779
Query: 964 VSQNLCNLIWKHRSPKKVQVFLWSLAYRSLNTDERIERKFKSWSLSPSACKLCLLLGEDL 1023
+ +W + P KV+ W +A+ +NT+++++ + SL P C LC GE +
Sbjct: 1780 ILFLPAKFLWSSKVPSKVKALAWIVAHGKVNTNDKLQLRRPYKSLCPQWCILCKGNGESI 1839
Query: 1024 DHLFLHCAFAKKVWFFVANLFGMSFCLPNKIEDWLLEGLAAWNLKKNAKIMAGCAFRAAV 1083
DHLFLHC +W + L G+ + P ED L+ K + A V
Sbjct: 1840 DHLFLHCPVTIGLWNKLFKLAGLDWVPPRSFEDMLVIAFKGLGNSLRGKTLWQVACLTLV 1899
Query: 1084 WLLWKERNSRTFEDKSASLE 1100
W++W+ERN R FEDK S E
Sbjct: 1900 WIVWQERNKRIFEDKGRSEE 1917
BLAST of Lcy03g006870 vs. NCBI nr
Match:
CAN68165.1 (hypothetical protein VITISV_008538 [Vitis vinifera])
HSP 1 Score: 897.5 bits (2318), Expect = 1.1e-256
Identity = 445/1098 (40.53%), Postives = 651/1098 (59.29%), Query Frame = 0
Query: 4 LLGAFSISIECSFNGQFEGWITGVYGLCTYRERFHFLQELHDIQGLCQGNWCIAGDFNMV 63
+LG+FS+S++ + +G + W++ VYG + R F EL DI GL WC+ GDFN++
Sbjct: 196 VLGSFSVSVKFAVDGSEQFWJSAVYGPNSTALRKDFWVELSDIFGLSSPCWCVGGDFNVI 255
Query: 64 RWSKERLNATNSVRSMRKFNSFIESYDLIDPPMSNGTFSWSRMGTRVAASRIDRFLISQL 123
R E+L SM+ + FI +LIDPP+ + +F+WS M R+DRFL S
Sbjct: 256 RRCSEKLGGGRLTPSMKDLDDFIRENELIDPPLRSASFTWSNMQEHPVCKRLDRFLYSNE 315
Query: 124 WNNTFPELRVERLHRPTSDHSPILMSIGVVKWGPTPFRFENLWIDTPEFKENIEKWWGDL 183
W FP+ E L R TSDH PI++ KWGPTPFRFEN+W+ P FKE +WW +
Sbjct: 316 WEQLFPQSLQEVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLHHPSFKECFGRWWREF 375
Query: 184 KPIGWAGFRLMEKLKGLKVLIKEWNKELMAMAINKKATILRKIEVFDKMEEQNAIDASQI 243
+ GW G + M KL+ LK +KEWNK I +K IL I FD ME++ + +
Sbjct: 376 QGDGWEGHKFMRKLQFLKAKLKEWNKNAFGDLIERKKCILLDIANFDSMEQEGGLSPELL 435
Query: 244 EERKILKAELLDLTVAKQRSINQKCKLKWIQEGDENSSFFHKWASTMRSKAFISMIEKEN 303
+R + K EL +L + ++ QK ++KW++EGD NS FHK A+ R++ FI ++E E
Sbjct: 436 IQRAVRKGELEELILREEIHWRQKARVKWVKEGDCNSKXFHKVANGRRNRKFIKVLENER 495
Query: 304 GEILTKQEEIEAEILSFYSKFYEKDYDHKFVIEGPDWVPIGDISKSKLEEAFSVEEIYKV 363
G +L + I+ EIL ++ K Y + +EG DW PI S S+LE F+ EEIYK
Sbjct: 496 GLVLDNSDSIKEEILRYFEKLYASPSGESWRVEGLDWSPISRESASRLESPFTEEEIYKA 555
Query: 364 VMDMGSQKSPGPDGMTGEFWKNYWNILKSDLVEVFQEFFQKGIINKRTNETYICLIPKKK 423
+ M +PGPDG T +++ W+++K DLV VF EF + GIIN+ TN ++I L+PKK
Sbjct: 556 IFQMDRDXAPGPDGFTIAVFQDCWDVIKEDLVRVFDEFHRSGIINQSTNASFIVLLPKKS 615
Query: 424 RALKVKDFRPISLVTSPYKLIAKVLAERLKKVLPNTISDCQAAFVQGRQILDAILVATEA 483
A K+ ++RPISL+TS YK+IAKVLA RL+ +L TI Q AFVQGRQILDA+L+A E
Sbjct: 616 MAKKISNYRPISLITSLYKIIAKVLAGRLRGILHETIHSTQGAFVQGRQILDAVLIANEI 675
Query: 484 VEDIRLRKEKGFLLKLDLEKAYDMVNWDFLDGILELKGFGHKWRRWIKGCLYNTNFSILI 543
V++ + E+G + K+D EKAYD V+WDFLD ++E KGF R+WI+ CL + +F+IL+
Sbjct: 676 VDEKKRSGEEGVVFKIDFEKAYDHVSWDFLDHVMEKKGFNPXXRKWIRXCLSSVSFAILV 735
Query: 544 NGRPRGKIMASRGLRQGDPLSPFLFTLVGDAISKSVHYCIEKKILKGWEIGQHKSIVSIL 603
NG +G + RGLRQGDPLSPFLFT+V D S + E+ + +G+ +G++++ VS L
Sbjct: 736 NGNAKGWVKXXRGLRQGDPLSPFLFTIVADVXSXMLLRAEERNVFEGFRVGRNRTRVSHL 795
Query: 604 QYADDTLLFCLANDRDMTKWWDILRMIMRGSGLALNLAKSALIGINVASPQANNLANLLG 663
Q+ADDT+ F + D+ +L + SGL +NL KS + GIN+ + LA LL
Sbjct: 796 QFADDTIFFSSTREEDLLTLKSVLXVFGHISGLKVNLDKSNIYGINLGQDHLHRLAELLD 855
Query: 664 FQSDSLPINYLGFPLGGNYHRISFWEPLIERFNHKLDSWRKLPISKGGRVTLAQSVLNSL 723
++ PI YLG PLGGN SFW+P+IER + +LD W+K +S GGR+TL QS L +
Sbjct: 856 CKASGWPILYLGLPLGGNPKSGSFWDPVIERISSRLDGWQKAYLSFGGRITLIQSCLTHM 915
Query: 724 PLYLFSLLKAPKSTINSMEKIVRDFVWSGGCYKQGSNLVKWEWSSLSCFHGGLGVGSLAQ 783
P Y SL K P S +E++ RDF+WSG + +LV W+ S GGLG+G ++
Sbjct: 916 PCYFLSLFKIPASVAGRIERLQRDFLWSGVGEGKRDHLVSWBVVCKSKMKGGLGLGRISL 975
Query: 784 KNFSLMTKWLWRFTQEKKSLWRQIIVSIYGASPEGWSTTPFRGKKGNRIWVDIAANFPTF 843
+N +L+ KWLWR+ +E +LW Q+I+SIYG+ GW W IA F F
Sbjct: 976 RNSALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDANTXVRWSHRCPWKAIAQVFQDF 1035
Query: 844 AKLAKFVVNNGTSIKFWKDSWCDNQTLQALFPDLYLISERKNATVAECWEGSNQ-AWNLA 903
+K +F+V +G I+FW+D W +Q+L FP L + KN ++ + +WN
Sbjct: 1036 SKFTRFIVGDGDRIRFWEDLWWGDQSLGVRFPRLLRVVMDKNILISSILGSTRPFSWNFN 1095
Query: 904 FRRGLFDREVSSWMILVEKLSSISLNSEQDDIR-WSLEGSSSYTARSMFQKMIKISPKVS 963
FRR L D E+ L++ L I L+ D R WSL S +T +S F + +IS S
Sbjct: 1096 FRRNLSDSEIEKVESLMQSLDHIHLSPSVPDKRSWSLSSSGLFTVKSFFLALSQISGLPS 1155
Query: 964 QNLCNLIWKHRSPKKVQVFLWSLAYRSLNTDERIERKFKSWSLSPSACKLCLLLGEDLDH 1023
L+W + P K++ F+W +A++ +NT++ ++ + +LSP C LC+ GE +DH
Sbjct: 1156 VFPTKLVWNSQVPFKIKFFVWLVAHKKVNTNDMLQLRRPYKALSPDICMLCMERGETVDH 1215
Query: 1024 LFLHCAFAKKVWFFVANLFGMSFCLPNKIEDWLLEGLAAWNLKKNAKIMAGCAFRAAVWL 1083
LFLHC+ +W + L + + P + D + + K ++ A A +W+
Sbjct: 1216 LFLHCSMTMGLWHRLFQLTKIDWVPPRSVFDMISINFNGFGSSKRGIVLWQAACIAILWV 1275
Query: 1084 LWKERNSRTFEDKSASLE 1100
+W+ERN+R FEDKS + E
Sbjct: 1276 VWRERNARIFEDKSRNSE 1293
BLAST of Lcy03g006870 vs. NCBI nr
Match:
RVW70234.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])
HSP 1 Score: 886.3 bits (2289), Expect = 2.6e-253
Identity = 441/1094 (40.31%), Postives = 646/1094 (59.05%), Query Frame = 0
Query: 4 LLGAFSISIECSFNGQFEGWITGVYGLCTYRERFHFLQELHDIQGLCQGNWCIAGDFNMV 63
++G+FS+S++ +G W++ VYG R F E+ D+ GL +WC+ GDFN++
Sbjct: 7 VIGSFSVSVKFLLDGSGPLWVSAVYGPNNPSIRKEFWVEMLDLFGLTYPSWCVGGDFNVI 66
Query: 64 RWSKERLNATNSVRSMRKFNSFIESYDLIDPPMSNGTFSWSRMGTRVAASRIDRFLISQL 123
R E+L + SMR F+ FI +L DPP+ N +F+WS M R+DRFL S
Sbjct: 67 RRRLEKLGGSGVTSSMRDFDGFIRECELHDPPLRNASFTWSNMQESPVCKRLDRFLYSNE 126
Query: 124 WNNTFPELRVERLHRPTSDHSPILMSIGVVKWGPTPFRFENLWIDTPEFKENIEKWWGDL 183
W +FP+ E L R TSDH PI++ KWGPTPFRFEN+W+ FKE+ WW +
Sbjct: 127 WELSFPQSLQEVLPRWTSDHWPIVLDTNPFKWGPTPFRFENMWLQHHNFKESFSSWWREF 186
Query: 184 KPIGWAGFRLMEKLKGLKVLIKEWNKELMAMAINKKATILRKIEVFDKMEEQNAIDASQI 243
+ GW G + M KL+ +K +K+WNK M +K TIL +I D +E++ A+ +
Sbjct: 187 EGNGWEGHKFMRKLQFVKAKLKDWNKNTFGMLKERKKTILDEIANIDAIEQEGALFSDLA 246
Query: 244 EERKILKAELLDLTVAKQRSINQKCKLKWIQEGDENSSFFHKWASTMRSKAFISMIEKEN 303
+R I K EL +L + ++ QK K+KW++EGD NS FHK A+ R+K F+ +E E
Sbjct: 247 AQRVIRKGELEELILREEIHWKQKAKVKWVKEGDCNSKLFHKVANGRRNKNFVKFLENER 306
Query: 304 GEILTKQEEIEAEILSFYSKFYEKDYDHKFVIEGPDWVPIGDISKSKLEEAFSVEEIYKV 363
G +L E I EIL ++ K Y + +EG DW PI + S S+L+ +F+ EI+
Sbjct: 307 GLVLDSSESITEEILLYFKKLYLSPPGESWRVEGIDWSPISEESASRLDSSFAEAEIFNA 366
Query: 364 VMDMGSQKSPGPDGMTGEFWKNYWNILKSDLVEVFQEFFQKGIINKRTNETYICLIPKKK 423
+ + K+PGPDG T +++ W+++K DLV VF EF GIIN+ TN ++I L+PKK
Sbjct: 367 IFQLDRDKAPGPDGFTIVVFQDCWDVIKEDLVRVFAEFHNSGIINQNTNASFIVLLPKKS 426
Query: 424 RALKVKDFRPISLVTSPYKLIAKVLAERLKKVLPNTISDCQAAFVQGRQILDAILVATEA 483
++ K+ DFRPISL+T YK+IAKVL+ RL+ VL TI Q AFVQGRQILDA+L+A E
Sbjct: 427 QSKKISDFRPISLITCLYKIIAKVLSGRLRGVLQETIHSTQGAFVQGRQILDAVLIANEI 486
Query: 484 VEDIRLRKEKGFLLKLDLEKAYDMVNWDFLDGILELKGFGHKWRRWIKGCLYNTNFSILI 543
V++ + E+G + K+D EKAYD V WDFLD +LE KGF KWR W++GCL + +++IL+
Sbjct: 487 VDEKKRSGEEGVVFKIDFEKAYDHVKWDFLDHVLEKKGFSSKWRSWMRGCLSSVSYAILV 546
Query: 544 NGRPRGKIMASRGLRQGDPLSPFLFTLVGDAISKSVHYCIEKKILKGWEIGQHKSIVSIL 603
NG +G + A RGLRQGDPLSPFLFT+V D +S+ + E+ +L+G+ IG+++ V+ L
Sbjct: 547 NGNAKGWVKAFRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNLLEGFRIGRNRCRVTHL 606
Query: 604 QYADDTLLFCLANDRDMTKWWDILRMIMRGSGLALNLAKSALIGINVASPQANNLANLLG 663
Q+ADDT+LF + ++ +L + + SGL +NL KS L GIN+ + LA LL
Sbjct: 607 QFADDTILFANPREEELQTLKSLLLVFGQISGLKVNLDKSNLFGINLDQNHLSRLALLLD 666
Query: 664 FQSDSLPINYLGFPLGGNYHRISFWEPLIERFNHKLDSWRKLPISKGGRVTLAQSVLNSL 723
++ PI YLG PLGGN FW+P+IER + +LD W+K S GGR+TL S L+ +
Sbjct: 667 CKASDWPIIYLGLPLGGNPTACGFWDPVIERISRRLDGWQKAYSSFGGRITLLHSCLSHI 726
Query: 724 PLYLFSLLKAPKSTINSMEKIVRDFVWSGGCYKQGSNLVKWEWSSLSCFHGGLGVGSLAQ 783
P Y SL K P S +E++ RDF+WSG + +LV+WE GGLG G +
Sbjct: 727 PSYFLSLFKIPASVAAKIERMQRDFLWSGVGEGKRDHLVRWEAVCKPRVIGGLGFGKIPL 786
Query: 784 KNFSLMTKWLWRFTQEKKSLWRQIIVSIYGASPEGWSTTPFRGKKGNRIWVDIAANFPTF 843
+N +L+ KWLWRF +E SLW Q+I+SIYG GW W IA F F
Sbjct: 787 RNRALLGKWLWRFPRESTSLWHQVILSIYGTHSNGWDANTTVRWSHRCPWKAIAQGFQDF 846
Query: 844 AKLAKFVVNNGTSIKFWKDSWCDNQTLQALFPDLYLISERKNATVAECWEGSNQ-AWNLA 903
+K F+V +G I+FW+D W +Q L+ +P L+ + KN + + S +WN
Sbjct: 847 SKYTWFIVGDGERIRFWEDLWWGDQILKDQYPRLFRVVMDKNIPIFSIFGSSRPFSWNFN 906
Query: 904 FRRGLFDREVSSWMILVEKLSSISLNSEQDDIR-WSLEGSSSYTARSMFQKMIKISPKVS 963
FRR L D E+ L+ L ++L++ D R WSL S +T +S F + ++
Sbjct: 907 FRRNLTDSEIEDLERLMHSLDCMNLSTSASDARSWSLCSSGLFTVKSFFAVLSQMPDSSP 966
Query: 964 QNLCNLIWKHRSPKKVQVFLWSLAYRSLNTDERIERKFKSWSLSPSACKLCLLLGEDLDH 1023
+WK + P KV+ F+W + ++ +NT++ ++ + ++SP CKLC+ GE DH
Sbjct: 967 FFPTKFVWKSQVPFKVKAFVWLVTHKKVNTNDLLQLRRPHKAISPDICKLCMEQGESADH 1026
Query: 1024 LFLHCAFAKKVWFFVANLFGMSFCLPNKIEDWLLEGLAAWNLKKNAKIMAGCAFRAAVWL 1083
+FLHC+ +W + L M + P I D + + K I+ A A +W+
Sbjct: 1027 IFLHCSVTLGLWHRLFQLAKMDWVPPKSISDMMFINYKGFGKSKRGVILWQNASIALIWV 1086
Query: 1084 LWKERNSRTFEDKS 1096
+W ERN+R FEDK+
Sbjct: 1087 VWWERNARIFEDKA 1100
BLAST of Lcy03g006870 vs. TAIR 10
Match:
AT1G43760.1 (DNAse I-like superfamily protein )
HSP 1 Score: 140.2 bits (352), Expect = 1.0e-32
Identity = 107/403 (26.55%), Postives = 176/403 (43.67%), Query Frame = 0
Query: 56 IAGDFNMVRWSKER---LNATNSVRSMRKFNSFIESYDLIDPPMSNGTFSWS-RMGTRVA 115
+ GDF+ + + + L + +R + +F + + DL+D P ++WS
Sbjct: 223 LVGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPI 282
Query: 116 ASRIDRFLISQLWNNTFPELRVERLHRPTSDHSP-ILMSIGVVKWGPTPFRFENLWIDTP 175
++DR + + W ++FP SDHSP I++ + K FR+ + P
Sbjct: 283 IRKLDRAIANGDWFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFSFLSTHP 342
Query: 176 EFKENIEKWWGDLKPIGWAGFRLMEKLKGLKVLIKEWNKELMAMAINKKATILRKIEVFD 235
F ++ W + P+G F L E LK K K N++ +K L +E
Sbjct: 343 TFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLESIQ 402
Query: 236 KMEEQNAIDASQIEERKILKAELLDLTVAKQRSINQKCKLKWIQEGDENSSFFHKWASTM 295
N D S + + + A + QK ++KW+Q+GD N+ FFHK
Sbjct: 403 SQLLTNPSD-SLFRVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFFHKVILAN 462
Query: 296 RSKAFISMIEKENGEILTKQEEIEAEILSFYSKFYEKDYDHKFVIEGPDWVP-------- 355
++K I + ++ + +++ I+++Y+ D D I PD V
Sbjct: 463 QAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGSDSD----ILTPDSVQRIKDIHPF 522
Query: 356 -IGDISKSKLEEAFSVEEIYKVVMDMGSQKSPGPDGMTGEFWKNYWNILKSDLVEVFQEF 415
D S+L S +EI V M K+PGPD T EF+ W ++K + +EF
Sbjct: 523 RCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEF 582
Query: 416 FQKGIINKRTNETYICLIPKKKRALKVKDFRPISLVTSPYKLI 445
F+ G + KR N T I LIPK ++ FRP+S T YK+I
Sbjct: 583 FRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCTVVYKII 620
BLAST of Lcy03g006870 vs. TAIR 10
Match:
AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )
HSP 1 Score: 69.3 bits (168), Expect = 2.2e-11
Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = 0
Query: 448 LAERLKKVLPNTISDCQAAFVQGRQILDAILVATEAVEDIRLRK-EKGF-LLKLDLEKAY 507
+ ERLK ++ N I QA+F+ GR D I+ EAV +R +K KG+ LLKLDLEKAY
Sbjct: 1 MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAY 60
Query: 508 DMVNWDFLDGILELKGFGHKW 527
D + WD+L+ L GF W
Sbjct: 61 DRIRWDYLEDTLISAGFPEVW 81
BLAST of Lcy03g006870 vs. TAIR 10
Match:
AT4G04650.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 67.4 bits (163), Expect = 8.2e-11
Identity = 65/256 (25.39%), Postives = 109/256 (42.58%), Query Frame = 0
Query: 851 VNNGTSIKFWKDSWCDNQTLQALFPDL--YLISERKNATVAECWEGSNQAWNLAFRRGLF 910
V +G + KFW D+W L + L + +A V + G+ +W +A R
Sbjct: 16 VGSGVTAKFWHDNWIGLGPLIEVIGPLGPRTVGLPIDAVVRDALRGT--SWWIASSRSRN 75
Query: 911 DREVSSWMILVEKLSSISLNSEQDDIRWSLE---GSSSYTARSMFQKMIKISPKVSQNLC 970
V +L E + + D W + S+ ++A + + S V +
Sbjct: 76 PIIVQLKNLLPEAQGLLDCQHD-DSFLWKTDLHAPSNRFSAPRTWSALHPQSHTVPWH-- 135
Query: 971 NLIWKHRSPKKVQVFLWSLAYRSLNTDERIERKFKSWSLS-PSACKLCLLLGEDLDHLFL 1030
+W K W +A+ L+T +R++ +W LS P+ C LC + HLF
Sbjct: 136 KAVWFKNHVPKHAFICWVVAWNRLHTRDRLQ----NWGLSIPAECLLCNAHDDSRAHLFF 195
Query: 1031 HCAFAKKVW-FFVANLFGMSFCLPNKIEDWLLEGLAAWNLKKNAKIMAGCAFRAAVWLLW 1090
C F+ VW FF A+ + P ++ D L L + + +KN ++ AF + V+ +W
Sbjct: 196 ECQFSGVVWRFFTAS---TNLNPPAQLMD-CLNWLLSPSREKNICLIIRLAFHSCVYAIW 255
Query: 1091 KERNSRTFEDKSASLE 1100
+ERN R S S E
Sbjct: 256 RERNQRLHSGVSRSTE 258
BLAST of Lcy03g006870 vs. TAIR 10
Match:
ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )
HSP 1 Score: 61.2 bits (147), Expect = 5.9e-09
Identity = 29/68 (42.65%), Postives = 41/68 (60.29%), Query Frame = 0
Query: 542 LINGRPRGKIMASRGLRQGDPLSPFLFTLVGDAISKSVHYCIEKKILKGWEIGQHKSIVS 601
+ING P+G + SRGLRQGDPLSP+LF L + +S E+ L G + + ++
Sbjct: 13 IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72
Query: 602 ILQYADDT 610
L +ADDT
Sbjct: 73 HLLFADDT 80
BLAST of Lcy03g006870 vs. TAIR 10
Match:
AT2G02520.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 48.5 bits (114), Expect = 4.0e-05
Identity = 39/133 (29.32%), Postives = 60/133 (45.11%), Query Frame = 0
Query: 968 IW-KHRSPKKVQVFLWSLAYRSLNTDERIERKFKSWS-LSPSACKLCLLLGEDLDHLFLH 1027
IW K + PK + ++ +R L+T +R+ SW + P C C E HLF
Sbjct: 47 IWFKGKIPKHAFIAWVNMRHR-LHTKDRM----ISWGFIFPPLCLFCNTHDETRQHLFFD 106
Query: 1028 CAFAKKVWFFVANLFGMSFCLPNKIED---WLLEGLAAWNLKKNAKIMAGCAFRAAVWLL 1087
C FA++VW + + + P ED WL KN + + A+V+ +
Sbjct: 107 CEFAREVWIYFTS--RVHVFPPLLFEDGIRWLKNPCQ----DKNVTTILRLSHHASVYTI 166
Query: 1088 WKERNSRTFEDKS 1096
WKERN+R + S
Sbjct: 167 WKERNARLHDSAS 168
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
O00370 | 4.3e-49 | 23.99 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 | [more] |
P08548 | 5.7e-49 | 24.72 | LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1 | [more] |
P14381 | 1.0e-45 | 25.15 | Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... | [more] |
P11369 | 1.7e-45 | 24.56 | LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... | [more] |
P0C2F6 | 2.0e-30 | 23.87 | Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... | [more] |
Match Name | E-value | Identity | Description | |
A0A438GDE7 | 9.8e-262 | 40.67 | LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_... | [more] |
A5BCI7 | 8.3e-261 | 40.67 | Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI... | [more] |
A0A438FWU5 | 2.0e-259 | 41.82 | LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF... | [more] |
A0A803P8A0 | 7.2e-257 | 40.86 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A5BPI6 | 1.6e-256 | 40.53 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_008538 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
RVW70235.1 | 2.0e-261 | 40.67 | LINE-1 retrotransposable element ORF2 protein [Vitis vinifera] | [more] |
CAN65484.1 | 1.7e-260 | 40.67 | hypothetical protein VITISV_029474 [Vitis vinifera] | [more] |
RVW64408.1 | 4.2e-259 | 41.82 | LINE-1 retrotransposable element ORF2 protein [Vitis vinifera] | [more] |
CAN68165.1 | 1.1e-256 | 40.53 | hypothetical protein VITISV_008538 [Vitis vinifera] | [more] |
RVW70234.1 | 2.6e-253 | 40.31 | LINE-1 retrotransposable element ORF2 protein [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |
AT1G43760.1 | 1.0e-32 | 26.55 | DNAse I-like superfamily protein | [more] |
AT4G20520.1 | 2.2e-11 | 46.91 | RNA binding;RNA-directed DNA polymerases | [more] |
AT4G04650.1 | 8.2e-11 | 25.39 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |
ATMG01250.1 | 5.9e-09 | 42.65 | RNA-directed DNA polymerase (reverse transcriptase) | [more] |
AT2G02520.1 | 4.0e-05 | 29.32 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |