Lcy03g006690 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g006690
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	23 kDa jasmonate-induced protein
Location	Chr03: 35637904 .. 35638276 (+)
RNA-Seq Expression	Lcy03g006690
Synteny	Lcy03g006690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACGATCGTTTTTAGTAAGTTTAATTTCTTTATATTTTTCGATTTTAGATATATTTGAAGATGGCATACAATGTGTTTGGCAATCCCATCACAGACGAAACTCTAAAATCCATGCCTGAGTATGAAGGGAAAACTATAACACGTCTAGATAGAGCACGTGTGGCACTTCAGATGAAGAATGCTCAAGATAAAGACAAAAATGCTCGAGAATATGTAGAAAATTTGAAAAGACAATGGGGAACGGGAGTTTCTACTCTTTGCGTAGTGTACAATGCCACTGGTGATACCATAAAGTTTGTTACAGATCACAACTGGCATGGTCATATTGGACCTGGTCCTTACCCAATTGAGATGGCAAATGGTCAATGA

mRNA sequence

ATGAAACGATCGTTTTTAATATATTTGAAGATGGCATACAATGTGTTTGGCAATCCCATCACAGACGAAACTCTAAAATCCATGCCTGAGTATGAAGGGAAAACTATAACACGTCTAGATAGAGCACGTGTGGCACTTCAGATGAAGAATGCTCAAGATAAAGACAAAAATGCTCGAGAATATGTAGAAAATTTGAAAAGACAATGGGGAACGGGAGTTTCTACTCTTTGCGTAGTGTACAATGCCACTGGTGATACCATAAAGTTTGTTACAGATCACAACTGGCATGGTCATATTGGACCTGGTCCTTACCCAATTGAGATGGCAAATGGTCAATGA

Coding sequence (CDS)

ATGAAACGATCGTTTTTAATATATTTGAAGATGGCATACAATGTGTTTGGCAATCCCATCACAGACGAAACTCTAAAATCCATGCCTGAGTATGAAGGGAAAACTATAACACGTCTAGATAGAGCACGTGTGGCACTTCAGATGAAGAATGCTCAAGATAAAGACAAAAATGCTCGAGAATATGTAGAAAATTTGAAAAGACAATGGGGAACGGGAGTTTCTACTCTTTGCGTAGTGTACAATGCCACTGGTGATACCATAAAGTTTGTTACAGATCACAACTGGCATGGTCATATTGGACCTGGTCCTTACCCAATTGAGATGGCAAATGGTCAATGA

Protein sequence

MKRSFLIYLKMAYNVFGNPITDETLKSMPEYEGKTITRLDRARVALQMKNAQDKDKNAREYVENLKRQWGTGVSTLCVVYNATGDTIKFVTDHNWHGHIGPGPYPIEMANGQ

Homology

[Close]

BLAST of Lcy03g006690 vs. ExPASy Swiss-Prot
Match: P32024 (23 kDa jasmonate-induced protein OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 4.8e-20
Identity = 47/102 (46.08%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 11  MAYNVFGNPITDETLKSMPEYEGKTITRLDRARVALQMKNAQDKDKNAREYVENLKRQWG 70
           MA  VFG PI+ +T+ +  EY+ + IT+ D A  A++M NA  KD NA+++V+NLK ++G
Sbjct: 1   MASGVFGTPISAQTVIATGEYK-EPITQKDVADYAMKMINAGGKDVNAQKFVDNLKERYG 60

Query: 71  TGVSTLCVVYNATGDTIKFVTDHNWHGHIGPGPYPIEMANGQ 113
            G++  C++YNATG T+ F   ++WHGHI   PYP ++ NGQ
Sbjct: 61  NGIAVKCLLYNATGATLNFAKYNDWHGHIYDTPYPSDIQNGQ 101

[Close]

BLAST of Lcy03g006690 vs. ExPASy TrEMBL
Match: A0A097BU21 (23 kDa jasmonate-induced protein OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.4e-45
Identity = 86/102 (84.31%), Postives = 95/102 (93.14%), Query Frame = 0


Query: 11  MAYNVFGNPITDETLKSMPEYEGKTITRLDRARVALQMKNAQDKDKNAREYVENLKRQWG 70
           MAYNVFGNPIT+ETL +MP+YEGK ITR DRA VAL MKNAQDKDKNAREYVE LK+QWG
Sbjct: 1   MAYNVFGNPITNETLAAMPDYEGKKITRRDRAHVALNMKNAQDKDKNAREYVERLKQQWG 60

Query: 71  TGVSTLCVVYNATGDTIKFVTDHNWHGHIGPGPYPIEMANGQ 113
           TGVSTLC++YNATGDTIKFV +H+WHGHIGPGPYPIE+ANGQ
Sbjct: 61  TGVSTLCLIYNATGDTIKFVVEHSWHGHIGPGPYPIEIANGQ 102

[Close]

BLAST of Lcy03g006690 vs. ExPASy TrEMBL
Match: A0A6J1DVF8 (23 kDa jasmonate-induced protein-like OS=Momordica charantia OX=3673 GN=LOC111023879 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.8e-39
Identity = 74/102 (72.55%), Postives = 88/102 (86.27%), Query Frame = 0


Query: 11  MAYNVFGNPITDETLKSMPEYEGKTITRLDRARVALQMKNAQDKDKNAREYVENLKRQWG 70
           MA NVFG P+T+ TL++MPEYEGK ITR+DRA VAL   + +DKDKNAREYV NLK +WG
Sbjct: 1   MAMNVFGTPVTNATLEAMPEYEGKEITRMDRAHVALNKMHTEDKDKNAREYVHNLKEEWG 60

Query: 71  TGVSTLCVVYNATGDTIKFVTDHNWHGHIGPGPYPIEMANGQ 113
           TGVSTLC++YNATGDTI FV +HNWHGH+GP PYPI++ANGQ
Sbjct: 61  TGVSTLCLLYNATGDTITFVLEHNWHGHVGPAPYPIQIANGQ 102

[Close]

BLAST of Lcy03g006690 vs. ExPASy TrEMBL
Match: A0A5A7T7X1 (23 kDa jasmonate-induced protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold811G00820 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.4e-37
Identity = 73/102 (71.57%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 11  MAYNVFGNPITDETLKSMPEYEGKTITRLDRARVALQMKNAQDKDKNAREYVENLKRQWG 70
           MA NVFGNPIT+ TL++MPEYEGKTITR DRA VA  MKNAQ+KD++AR++VE L+ +WG
Sbjct: 1   MADNVFGNPITNSTLQAMPEYEGKTITRRDRAYVAFNMKNAQNKDRSARDHVEKLREEWG 60

Query: 71  TGVSTLCVVYNATGDTIKFVTDHNWHGHIGPGPYPIEMANGQ 113
            GV+TLC++YNATGDTI FV +H+WHGHIG GPYP E+ANGQ
Sbjct: 61  HGVATLCLIYNATGDTITFVCEHSWHGHIGSGPYPSEIANGQ 102

[Close]

BLAST of Lcy03g006690 vs. ExPASy TrEMBL
Match: A0A5J5B2T1 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_029457 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.4e-37
Identity = 74/102 (72.55%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 11  MAYNVFGNPITDETLKSMPEYEGKTITRLDRARVALQMKNAQDKDKNAREYVENLKRQWG 70
           MAYNVFGNPIT+ TL+ MPEY  K I R+DRA VAL MKNA+ KD NAREYVENLKR+WG
Sbjct: 23  MAYNVFGNPITNSTLEGMPEYASKAIRRIDRAHVALNMKNAEKKDVNAREYVENLKRRWG 82

Query: 71  TGVSTLCVVYNATGDTIKFVTDHNWHGHIGPGPYPIEMANGQ 113
            GVSTLC+VYNATGDT+ FVT ++W GHIGP P+P ++ANGQ
Sbjct: 83  VGVSTLCLVYNATGDTVTFVTSYDWWGHIGPAPFPQQIANGQ 124

[Close]

BLAST of Lcy03g006690 vs. ExPASy TrEMBL
Match: A0A1S3B9I3 (23 kDa jasmonate-induced protein-like OS=Cucumis melo OX=3656 GN=LOC103487248 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.4e-37
Identity = 73/102 (71.57%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 11  MAYNVFGNPITDETLKSMPEYEGKTITRLDRARVALQMKNAQDKDKNAREYVENLKRQWG 70
           MA NVFGNPIT+ TL++MPEYEGKTITR DRA VA  MKNAQ+KD++AR++VE L+ +WG
Sbjct: 1   MADNVFGNPITNSTLQAMPEYEGKTITRRDRAYVAFNMKNAQNKDRSARDHVEKLREEWG 60

Query: 71  TGVSTLCVVYNATGDTIKFVTDHNWHGHIGPGPYPIEMANGQ 113
            GV+TLC++YNATGDTI FV +H+WHGHIG GPYP E+ANGQ
Sbjct: 61  HGVATLCLIYNATGDTITFVCEHSWHGHIGSGPYPSEIANGQ 102

[Close]

BLAST of Lcy03g006690 vs. NCBI nr
Match: XP_038891763.1 (23 kDa jasmonate-induced protein-like [Benincasa hispida])

HSP 1 Score: 196.1 bits (497), Expect = 1.7e-46
Identity = 89/102 (87.25%), Postives = 97/102 (95.10%), Query Frame = 0


Query: 11  MAYNVFGNPITDETLKSMPEYEGKTITRLDRARVALQMKNAQDKDKNAREYVENLKRQWG 70
           MAYNVFGNPIT+ETL+SMPEYEGKTITR DRA VAL MKNAQDKDKNAREYVE LK+QWG
Sbjct: 1   MAYNVFGNPITNETLESMPEYEGKTITRQDRAHVALNMKNAQDKDKNAREYVERLKQQWG 60

Query: 71  TGVSTLCVVYNATGDTIKFVTDHNWHGHIGPGPYPIEMANGQ 113
           TGVSTLC++YNATGDTIKFV +H+WHGHIGPGPYPIE+ANGQ
Sbjct: 61  TGVSTLCLIYNATGDTIKFVVEHSWHGHIGPGPYPIEIANGQ 102

[Close]

BLAST of Lcy03g006690 vs. NCBI nr
Match: AIS71930.1 (23 kDa jasmonate-induced protein [Citrullus lanatus])

HSP 1 Score: 190.7 bits (483), Expect = 7.0e-45
Identity = 86/102 (84.31%), Postives = 95/102 (93.14%), Query Frame = 0


Query: 11  MAYNVFGNPITDETLKSMPEYEGKTITRLDRARVALQMKNAQDKDKNAREYVENLKRQWG 70
           MAYNVFGNPIT+ETL +MP+YEGK ITR DRA VAL MKNAQDKDKNAREYVE LK+QWG
Sbjct: 1   MAYNVFGNPITNETLAAMPDYEGKKITRRDRAHVALNMKNAQDKDKNAREYVERLKQQWG 60

Query: 71  TGVSTLCVVYNATGDTIKFVTDHNWHGHIGPGPYPIEMANGQ 113
           TGVSTLC++YNATGDTIKFV +H+WHGHIGPGPYPIE+ANGQ
Sbjct: 61  TGVSTLCLIYNATGDTIKFVVEHSWHGHIGPGPYPIEIANGQ 102

[Close]

BLAST of Lcy03g006690 vs. NCBI nr
Match: XP_022157068.1 (23 kDa jasmonate-induced protein-like [Momordica charantia] >XP_022157069.1 23 kDa jasmonate-induced protein-like [Momordica charantia])

HSP 1 Score: 170.2 bits (430), Expect = 9.8e-39
Identity = 74/102 (72.55%), Postives = 88/102 (86.27%), Query Frame = 0


Query: 11  MAYNVFGNPITDETLKSMPEYEGKTITRLDRARVALQMKNAQDKDKNAREYVENLKRQWG 70
           MA NVFG P+T+ TL++MPEYEGK ITR+DRA VAL   + +DKDKNAREYV NLK +WG
Sbjct: 1   MAMNVFGTPVTNATLEAMPEYEGKEITRMDRAHVALNKMHTEDKDKNAREYVHNLKEEWG 60

Query: 71  TGVSTLCVVYNATGDTIKFVTDHNWHGHIGPGPYPIEMANGQ 113
           TGVSTLC++YNATGDTI FV +HNWHGH+GP PYPI++ANGQ
Sbjct: 61  TGVSTLCLLYNATGDTITFVLEHNWHGHVGPAPYPIQIANGQ 102

[Close]

BLAST of Lcy03g006690 vs. NCBI nr
Match: XP_038880403.1 (23 kDa jasmonate-induced protein-like [Benincasa hispida])

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-37
Identity = 77/102 (75.49%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 11  MAYNVFGNPITDETLKSMPEYEGKTITRLDRARVALQMKNAQDKDKNAREYVENLKRQWG 70
           MA NVFGNPIT+ TL++MPEYEGKTITR DRA VAL MKNAQ KDK A++YVENL+ +WG
Sbjct: 1   MADNVFGNPITNSTLEAMPEYEGKTITRQDRAHVALNMKNAQGKDKAAQDYVENLRIKWG 60

Query: 71  TGVSTLCVVYNATGDTIKFVTDHNWHGHIGPGPYPIEMANGQ 113
            GV+TLCVVYNATGDTIKFV +++WHGHIG  PYP E+ANGQ
Sbjct: 61  DGVATLCVVYNATGDTIKFVCEYSWHGHIGSSPYPYEIANGQ 102

[Close]

BLAST of Lcy03g006690 vs. NCBI nr
Match: XP_008443732.1 (PREDICTED: 23 kDa jasmonate-induced protein-like [Cucumis melo])

HSP 1 Score: 164.1 bits (414), Expect = 7.0e-37
Identity = 73/102 (71.57%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 11  MAYNVFGNPITDETLKSMPEYEGKTITRLDRARVALQMKNAQDKDKNAREYVENLKRQWG 70
           MA NVFGNPIT+ TL++MPEYEGKTITR DRA VA  MKNAQ+KD++AR++VE L+ +WG
Sbjct: 1   MADNVFGNPITNSTLQAMPEYEGKTITRRDRAYVAFNMKNAQNKDRSARDHVEKLREEWG 60

Query: 71  TGVSTLCVVYNATGDTIKFVTDHNWHGHIGPGPYPIEMANGQ 113
            GV+TLC++YNATGDTI FV +H+WHGHIG GPYP E+ANGQ
Sbjct: 61  HGVATLCLIYNATGDTITFVCEHSWHGHIGSGPYPSEIANGQ 102

The following BLAST results are available for this feature:

BLAST of Lcy03g006690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P32024	4.8e-20	46.08	23 kDa jasmonate-induced protein OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]

BLAST of Lcy03g006690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A097BU21	3.4e-45	84.31	23 kDa jasmonate-induced protein OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A6J1DVF8	4.8e-39	72.55	23 kDa jasmonate-induced protein-like OS=Momordica charantia OX=3673 GN=LOC11102...	[more]
A0A5A7T7X1	3.4e-37	71.57	23 kDa jasmonate-induced protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5J5B2T1	3.4e-37	72.55	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_029457 PE=4 SV=1	[more]
A0A1S3B9I3	3.4e-37	71.57	23 kDa jasmonate-induced protein-like OS=Cucumis melo OX=3656 GN=LOC103487248 PE...	[more]

BLAST of Lcy03g006690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891763.1	1.7e-46	87.25	23 kDa jasmonate-induced protein-like [Benincasa hispida]	[more]
AIS71930.1	7.0e-45	84.31	23 kDa jasmonate-induced protein [Citrullus lanatus]	[more]
XP_022157068.1	9.8e-39	72.55	23 kDa jasmonate-induced protein-like [Momordica charantia] >XP_022157069.1 23 k...	[more]
XP_038880403.1	1.1e-37	75.49	23 kDa jasmonate-induced protein-like [Benincasa hispida]	[more]
XP_008443732.1	7.0e-37	71.57	PREDICTED: 23 kDa jasmonate-induced protein-like [Cucumis melo]	[more]

BLAST of Lcy03g006690 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 48..68
None	No IPR available	PANTHER	PTHR36482	OSJNBA0024J22.15 PROTEIN	coord: 11..112
None	No IPR available	PANTHER	PTHR36482:SF5	OSJNBA0024J22.15 PROTEIN	coord: 11..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g006690.1	Lcy03g006690.1	mRNA