Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCCATCCGAATATCCATCAGTTTACAGTGGCACAACTTATAGACAACTATGGCAGATGGAATGAGCCTTTGGTTCGAGGCTCTTTTACGGAAGAGGATGCAATGAGAATTCTAAATATCCCTCTGAGCTCGTTGCTAAAGGAGGATGAGGTTATTTGGAATCTTGATTCAAAGGGGCAATTCTCCGTCAAAAGTGCTTATAGGTTGGGTCGACACCTATTACAGGCCAATGAAGCTTCCCATCAAGCCTTTAGCATCAAGAATGTTTCTGGAAATCTTTTTGGAGCTCTAAAATTCCCTCCAAAATAAAACACTGTGGCTGGAAAATTTACAATGACATTTTTCCTACCCTATCTAATTTGATTACTCGTGGATTGGATATTAATCCCATATGTTACTTGTGTAGGGATAAACTAGAATCAGCTGAGCACTTATTCTGGGAGTGTAAAGCGATAAAAGGGTTGTGGTATAACTATTTTCCTTCGACTAAGTTAATTTGTTTGGATGGCAAGAAAGGATGGACCACTCAAGAATATTGTGAAAGCATGTGGAAAGGTAGCAAGGACGGACATTTAGATGAGCAGAGATTAAGCACAAGCCTGGTGATCTGTTGGCAGATATGGGACTACAGAAATTCGATATACAAAAGAAAACAGCAGCCCAACCTAAAGATGTTGAAGGACCGAATAGATACCTACCTTGAAGAGTTCAATTGCCAGGGAAGCCAGCCGCGCACACATCCAACCACCCATGCAAATAACGTCAGCAATCTTCCATTAATTGGGACTTGGATTCCACCGTCGGATAACCAGATGAAGTTAAGTTGCGATGCCACCTGGAGTGACTGTCGAAGGCAAATTGGAATCGGCTGGATCTTACGGCAGTCGAACGACAAGCCGTTGGTAGCAGGGTTCAAATGCATCAAACGTCAATGGAGGATTAGTTGGTTGGAGGCGTTGGCTATTTGTGAAGGGCTGAGATACATTCCGAAGCAGGTTGTCGGAGTTCACATCGAATCAGACGCATGCAATGTGGTGAAGCTTCTCACGTCCAACGATGAGGATATAACCAAGATTTCCAATTTTATCTCTGAAGCTAAAGCCCTAATTGAAGCCCAAAACATTGTTTCAATAAAGTATGTGAGTAGATCTCATAATGGTATAGCCCACCAATTGGCTACTAAAGCATGCCAAGGTGGAGCATCAACTTATTGGGAGAATTTTTTTTCCTGATTGGGTGATAGGTTTAAATTTAATTGACATTGGGTTTGGTAATCAAATTAGTGGGGATCCTGTCCCACAATTGATATCCCAATGGAAAGTTTATCTTTGATTTAATGAAGTATTCTTTATAAAAAAAACACATGAAATATCTTATTGATTAATTTATTTAATAAAAAGAAATTAAAACTCTCTAAAAAATGAGGAAAATGATAGAGATTTATATAGAAAAAAAAACAAGTAAAAGCTGGTTAATGAAAATGAGAAAAAAAAAAAAGATAAAAACAAATAAGAAAAATGGAAAACGAGGAGAGATAAAAAAAAATGAAAAGAGAAAAAAAAAGGAAAAAGAATAAGAAGAATTAGGAAGTATTAAAAGGGAAAAAATATTTTTTAAAAAAAAAGGGAAAAAGAAGTTACTAACGGGAAAGAAAGAAATGAGAGAGAAAGAGGAGAGATGAGTGTAGAAATGAGAGAGAGTGAAATGCATGAAAATTGAAAAAGAAACAAAAACAGAATTTTGAGAAATTACTATTCGTGGATTTTTCAAACTTTATCCCATTTTCATAAACAATTTTTAAAGTTTAGAAACAAAATTTATCAAACATGTCTGCTTTCTTAAAAAAATGAGAAACAAAAATCAAAAGCAAAACACAACAACATCATCTAACAAGCTTCAGACTAAAAGTTGAACTTATCCTTTATGTTTTTTTTTTCTTTTTCTTTTTTAAATATTAGTGAAATCTTATCATAATTTTAAAAATATAGTTTTTAAAACACTGTTTTTTCAAACGTTTTAGAATTCATAAAAAGTAAAAAGGTATAAAAGGCTATTTTTCCAAAGATAGGTATGTTTATATGAACGAGCTTCAAGTTTGAATTTCTATCATTATATACTGGGATAGACTATATGTCCGTTTGGAATATCTTTTAACTTAAGTATTTTTCAAGAATGATTTTTTAAAAATATTTGATATAAAAGTTGTTTCTATATGCAAGTTATTATATATACTCAAAAACACTTTTAAAAAAAAATTACTTTCAAGTATTTTTCTCAAAATAATTTATTATTTCTCAATTTCATTTTTTAATAAGTCGTTTTTAGTGGTTCTCAAACACTAATTTTTTTTTTCAAAATGATTTTTATTTTTTCAAAATTAAACACTTGAAAAGTTAAATCAAACATCAAACTCATTAGCTTAAATTTTGGGGTTCATTGATGATTTTACAAATATTGTATAAGAAGTTAAAAATTAATAACACAATAGTAAAAGGACGAAAATGAAAACTTAAACTTTAAAAACAAAATTAGTTGACTAACTTAATGCAATAAACTTGGAAGCTGGTTCTTCTTATCTCTAATTAATAAGATGATTCGAGAGAATGAAACAAAAGTTAAAAAGGTTGATACTACACTACCAACGGTTGTGAATTGAGCTCCAGCTTCCTTATTTTATTTAGGTTAAATTCTCAAAAATACCCTTGAACTATAAAAATACCCCTAAACTATGAGATATTGGTTTCAATTATACCCCTGAACTTTTAAAAGTTTCATTTTAGTGCCCGAAGTTCAAAGTAACGACCATTGAAGACATTTTCCGTTAAATTTATAGACGAAAAATGATATATGTTTGCATGTGTTTAATTTTATTGTTTTTTCCACGTGTATATGTTCAAATATGTTCACATAATTAGCAACAGTGTCTATGTAAACACGTCATTTTCCGTCCATAAATTTAACGAAAAAATGCCTTCAAAGATTGTTTTGAAACAAAATTCAAATTTCGAAGGTTGAGACCCCGTTTGATAATCATTTCGGCCCCGTTTGATAACCATTTCGTTTTTTGTTTTTGGTTTTTGAAAATAAAGCTTATACACACCTACTTTCACTTATAAGTTTCTTTGTTTTAGTAAGAACCTTCTCTCTTTTTTTAAAAAACCAAGTCCAATTTTGAAAACAAAAAAAAAGTAGTTTTCAAAAACTTGTTTTTGTTTTTAGAATTTTTCTAGGAATTCAAATGGATCGTTAACAAGGATGAAAGCCATGGTAGGGAATTTAGGAGAAAACAAGCATAATTTTCAAAAACCAAAAACAAAAAACGAAATGATTATCAAACGGGGCTTTCGTTTTTGGTTTTTGGTTTTTGAAAATTAAGCCTATAAACTCTATTTTTACCCACAAGCTTCTTTATTTTTTATCTACATCCTTTCCCATGTTTTCAAAAACCAAGCCAAATTTTGAAAACAAAAAAAAAATAGTTTTCAAAAACTTGTTTTTGTTTTTGGAATTTGGCTAGGAACTCAAATGTCTCCTTAACAAAAATGAAAACCGTTGTAAGAAGTTTGAGAGAAAACAAGCACAATTTTCAAAAACCAAAATCCAAAAACGAAATGGTTATCAAACGGGACCTAAAATGTAACTTTTGAATGTTGAGAAGTATAATTGAAACCAACCTCATAGTTCAAGGTATTTTTGATAAGTTAGCCTTTTATTTATTTATTTATTTTTTGAGTCACTTGAGATTCCTTATTCTTTATATAGCCAAACACACTTTATATAAAGAAGAAGGCAATATCCAAAATTGTTGTGGAAAATTCGAGGCGTTGGATTTAGGTACCTTCTGACCAAAAGAAATTCATTTCGATCTTCCTTTAAAATGTTTTTTTTTTTTTTTCTTTTCTTTTTTTCTTAGCCAAAAAAGCATATGATAACGACTCTTCTTCTTTCTTATTTTGATGTTTCCTTTATATTTATGCAGCTCAATCTAATCGTCGGTTCATTCATATCTAAGGTGAGTGAAATTTTATGTTTTTTTTGGAATGTTTGTTTGTTGTTTGTGTATTGAAAAAAATAAAGCTTCAAATATTTGTGTTCATGATCATGTTTGTTATATTTTTGCAGTGTTTGAAGCTGTTGAAATTTGCAGCTGATCTTTGA
mRNA sequence
ATGACCCATCCGAATATCCATCAGTTTACAGTGGCACAACTTATAGACAACTATGGCAGATGGAATGAGCCTTTGGTTCGAGGCTCTTTTACGGAAGAGGATGCAATGAGAATTCTAAATATCCCTCTGAGCTCGTTGCTAAAGGAGGATGAGGTTATTTGGAATCTTGATTCAAAGGGGCAATTCTCCGTCAAAAGTGCTTATAGGGATAAACTAGAATCAGCTGAGCACTTATTCTGGGAGTGTAAAGCGATAAAAGGGTTGTGGTATAACTATTTTCCTTCGACTAAGTTAATTTGTTTGGATGGCAAGAAAGGATGGACCACTCAAGAATATTGTGAAAGCATGTGGAAAGGTAGCAAGGACGGACATTTAGATGAGCAGAGATTAAGCACAAGCCTGGTGATCTGTTGGCAGATATGGGACTACAGAAATTCGATATACAAAAGAAAACAGCAGCCCAACCTAAAGATGTTGAAGGACCGAATAGATACCTACCTTGAAGAGTTCAATTGCCAGGGAAGCCAGCCGCGCACACATCCAACCACCCATGCAAATAACGTCAGCAATCTTCCATTAATTGGGACTTGGATTCCACCGTCGGATAACCAGATGAAGTTAAGTTGCGATGCCACCTGGAGTGACTGTCGAAGGCAAATTGGAATCGGCTGGATCTTACGGCAGTCGAACGACAAGCCGTTGGTAGCAGGGTTCAAATGCATCAAACGTCAATGGAGGATTAGTTGGTTGGAGGCGTTGGCTATTTGTGAAGGGCTGAGATACATTCCGAAGCAGGTTGTCGGAGTTCACATCGAATCAGACGCATGCAATGTGGTGAAGCTTCTCACGTCCAACGATGAGGATATAACCAAGATTTCCAATTTTATCTCTGAAGCTAAAGCCCTAATTGAAGCCCAAAACATTGTTTCAATAAAGTATCTCAATCTAATCGTCGGTTCATTCATATCTAAGTGTTTGAAGCTGTTGAAATTTGCAGCTGATCTTTGA
Coding sequence (CDS)
ATGACCCATCCGAATATCCATCAGTTTACAGTGGCACAACTTATAGACAACTATGGCAGATGGAATGAGCCTTTGGTTCGAGGCTCTTTTACGGAAGAGGATGCAATGAGAATTCTAAATATCCCTCTGAGCTCGTTGCTAAAGGAGGATGAGGTTATTTGGAATCTTGATTCAAAGGGGCAATTCTCCGTCAAAAGTGCTTATAGGGATAAACTAGAATCAGCTGAGCACTTATTCTGGGAGTGTAAAGCGATAAAAGGGTTGTGGTATAACTATTTTCCTTCGACTAAGTTAATTTGTTTGGATGGCAAGAAAGGATGGACCACTCAAGAATATTGTGAAAGCATGTGGAAAGGTAGCAAGGACGGACATTTAGATGAGCAGAGATTAAGCACAAGCCTGGTGATCTGTTGGCAGATATGGGACTACAGAAATTCGATATACAAAAGAAAACAGCAGCCCAACCTAAAGATGTTGAAGGACCGAATAGATACCTACCTTGAAGAGTTCAATTGCCAGGGAAGCCAGCCGCGCACACATCCAACCACCCATGCAAATAACGTCAGCAATCTTCCATTAATTGGGACTTGGATTCCACCGTCGGATAACCAGATGAAGTTAAGTTGCGATGCCACCTGGAGTGACTGTCGAAGGCAAATTGGAATCGGCTGGATCTTACGGCAGTCGAACGACAAGCCGTTGGTAGCAGGGTTCAAATGCATCAAACGTCAATGGAGGATTAGTTGGTTGGAGGCGTTGGCTATTTGTGAAGGGCTGAGATACATTCCGAAGCAGGTTGTCGGAGTTCACATCGAATCAGACGCATGCAATGTGGTGAAGCTTCTCACGTCCAACGATGAGGATATAACCAAGATTTCCAATTTTATCTCTGAAGCTAAAGCCCTAATTGAAGCCCAAAACATTGTTTCAATAAAGTATCTCAATCTAATCGTCGGTTCATTCATATCTAAGTGTTTGAAGCTGTTGAAATTTGCAGCTGATCTTTGA
Protein sequence
MTHPNIHQFTVAQLIDNYGRWNEPLVRGSFTEEDAMRILNIPLSSLLKEDEVIWNLDSKGQFSVKSAYRDKLESAEHLFWECKAIKGLWYNYFPSTKLICLDGKKGWTTQEYCESMWKGSKDGHLDEQRLSTSLVICWQIWDYRNSIYKRKQQPNLKMLKDRIDTYLEEFNCQGSQPRTHPTTHANNVSNLPLIGTWIPPSDNQMKLSCDATWSDCRRQIGIGWILRQSNDKPLVAGFKCIKRQWRISWLEALAICEGLRYIPKQVVGVHIESDACNVVKLLTSNDEDITKISNFISEAKALIEAQNIVSIKYLNLIVGSFISKCLKLLKFAADL
Homology
BLAST of Lcy03g005780 vs. ExPASy TrEMBL
Match:
A0A6J1DL64 (uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1)
HSP 1 Score: 127.5 bits (319), Expect = 1.1e-25
Identity = 74/221 (33.48%), Postives = 115/221 (52.04%), Query Frame = 0
Query: 68 YRDKLESAEHLFWECKAIKGLWYNYFPSTKLICLDGKKGWTTQEYCESMWKGSKDGHLDE 127
+R K E+ +H+ WECK IK +W N P + WTT+EY E W K G +
Sbjct: 130 FRKKEETTQHILWECKVIKDIWINCTPIEANFFYIDRTNWTTKEYWE--WLMDKAGEEER 189
Query: 128 QRLSTSLVICWQIWDYRN-SIYK--RKQQPNLKMLKDR--IDTYLEEFNCQGSQPRTHPT 187
+R S++I QIW+ RN SI+K + ++++ DR I++ ++ N + HP
Sbjct: 190 RR---SMIIACQIWEMRNKSIFKGVHSETRDIQLAIDRYIINSAGQDTNLKRKSKDFHPI 249
Query: 188 THANNVSNLPLIGTWIPPSDNQMKLSCDATWSDCRRQIGIGWILRQSNDKPLVAGFKCIK 247
+ + W PP+ N KL+ DA W GIGWILR + + G + I+
Sbjct: 250 RRIGDNTR----ARWKPPTSNSWKLNTDAAWRADTNTDGIGWILRDEKGEVIKTGCRIIR 309
Query: 248 RQWRISWLEALAICEGLRYIPKQ-VVGVHIESDACNVVKLL 283
+ I++LE +AICEGLR I ++ +H+ESD+ + LL
Sbjct: 310 AERNITYLEVMAICEGLRAIRQEHCRPIHLESDSLEAIHLL 341
BLAST of Lcy03g005780 vs. ExPASy TrEMBL
Match:
A0A5C7IST2 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_000473 PE=4 SV=1)
HSP 1 Score: 117.1 bits (292), Expect = 1.4e-22
Identity = 92/332 (27.71%), Postives = 145/332 (43.67%), Query Frame = 0
Query: 11 VAQLIDNYGRWNEPLVRGSFTEEDAMRILNIPLSSLLKEDEVIWNLDSKGQFSVKSAYRD 70
V+ LI++ G+WNE L+R +F E+A IL+IPLS L+ D +W+ + G F+VKSAYR
Sbjct: 44 VSTLIESPGKWNESLIRRNFLPEEAELILSIPLSVYLRRDSFLWHFNKDGTFTVKSAYRV 103
Query: 71 KL----------------------ESAEHLFWECKAIKGLWYN--YFPSTKLICLDGKKG 130
+ E+ EH W CK++K W + F + +D G
Sbjct: 104 AISAMKRFEAFCSSALCPLCREGPETVEHALWRCKSVKPEWNHCPLFSDLNKLKIDDFLG 163
Query: 131 WTTQEYCESMWKGSKDGHLDEQRLSTSLVICWQIWDYRN-SIYKRKQQPNLKMLKDRIDT 190
+W S + + + + W +W+ RN S+++ K K D T
Sbjct: 164 -------RVIWVASV---ANLENVVNFITTAWLVWNNRNQSLFREK----AKCWGDSW-T 223
Query: 191 YLEEFNCQGSQPRTHPTTHANNVSNLP--LIGTWIPPSDNQMKLSCDATWSDCRRQIGIG 250
F G T NN S +P +I WIPPS +K++ DA R + +G
Sbjct: 224 KATLFLSGGKTIETQ-----NNSSAIPSLVIKNWIPPSFGTIKVNVDAALDVGRNKFSVG 283
Query: 251 WILRQSNDKPLVAGFKCIKRQWRISWLEALAICEGLRYIPKQ-VVGVHIESDACNVVKLL 310
++R S+ + L + + EA I EGL + + IESD+ NVV+L
Sbjct: 284 IVIRDSSGRILKSAALVFNGRTSTDIAEAKVIYEGLLLATSSGLQPLSIESDSLNVVRLC 343
Query: 311 TSNDEDITKISNFISEAKALIEAQNIVSIKYL 315
+ N I + + L+ + SI Y+
Sbjct: 344 NGEISTRNDVFNVICDIQFLLSRERKTSISYI 355
BLAST of Lcy03g005780 vs. ExPASy TrEMBL
Match:
A0A803QGM9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 108.2 bits (269), Expect = 6.6e-20
Identity = 86/332 (25.90%), Postives = 144/332 (43.37%), Query Frame = 0
Query: 10 TVAQLIDNYGRWNEPLVRGSFTEEDAMRILNIPLSSLLKEDEVIWNLDSKGQFSVKSAYR 69
TVA LI N W+ PL+R F IL+IPLS D +IW G +SVKS +
Sbjct: 1895 TVASLIKNDMSWDFPLIRNYFPTHIVQEILSIPLSLQPSSDTLIWEHTKLGVYSVKSGHH 1954
Query: 70 DKLESAEHLFWECKAI-----KGLWYNYFP--STKLICLDGKKGWTTQEYCESMWKGSKD 129
L S L + K LW+ P S + +C KG +Y S S
Sbjct: 1955 ISLSSTAPLDIPSSSTPSPWWKNLWHLNIPPKSVQRVC----KGTIFYDYVFSS-PPSIT 2014
Query: 130 GH---------LDEQRLSTSLVICWQIWDYRNSIYKRKQQPNLKMLKDRIDTYLEEFNCQ 189
H L ++ + + L + W IW+ RN +R+ Q + D + +L E+
Sbjct: 2015 FHDIAHTIYVNLTKEEVESFLCVAWLIWNNRNRALRRQSQDQTHAIVDLANCFLVEYKSV 2074
Query: 190 GSQPRTHPTTHANNVSNLPLIGTWIPPSDNQMKLSCDATWSDCRRQIGIGWILRQSNDKP 249
S +P A S+ P +W PP ++KL+ D + +G G ++R S+
Sbjct: 2075 VS--TRNPQACA---SSTPSATSWTPPDPGRLKLNVDTVVPNDPSNVGFGGVIRNSDGLV 2134
Query: 250 LVAGFKCIKRQWRISWLEALAICEGLRYIPKQVVGVH-IESDACNVVKLLTSNDEDITKI 309
+ A + IS LEA ++ LR+ ++ +H +E+D + L+ + ED++
Sbjct: 2135 VAAVASSYAKGGDISTLEAKSLLLSLRWCVEESFPIHCVETDCKAISDALSHSREDLSSF 2194
Query: 310 SNFISEAKALIEAQNIVSIKYLNLIVGSFISK 325
+ I++ +A + + ++N +F K
Sbjct: 2195 DDIINQIRATLSLIPGAYVTHVNQTANTFAHK 2216
BLAST of Lcy03g005780 vs. ExPASy TrEMBL
Match:
B8BN96 (Reverse transcriptase domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_37529 PE=4 SV=1)
HSP 1 Score: 104.4 bits (259), Expect = 9.6e-19
Identity = 84/331 (25.38%), Postives = 136/331 (41.09%), Query Frame = 0
Query: 11 VAQLIDNYGRWNEPLVRGSFTEEDAMRILNIPLSSLLKEDEVIWNLDSKGQFSVKSAYR- 70
V+ LI G W+ P + F DA ILNI +SS +ED + W+ D G FSV+SAYR
Sbjct: 1417 VSDLITEDGSWDVPKIHQYFHNLDAEVILNICISSRSEEDFIAWHPDKNGMFSVRSAYRL 1476
Query: 71 ---------------DKLESAEHLFWECKAIKGLWYNYFPSTKLICLDGKKGWTTQEYCE 130
+ + A + W+CK + K+ W C
Sbjct: 1477 AAQLVNIEESSSSGTNNINKAWEMIWKCKVPQ--------KVKIF------AWRVASNCL 1536
Query: 131 SMWKGSKDGHLDEQRLSTSLVICWQIWDYRNSIYKRKQQPNLKMLKDRIDTYLEEFNCQG 190
+ ++ L+ W+ W RN + K P + + I +Y++
Sbjct: 1537 A-------------TMAMFLMTLWRNWYVRNELIHGKSAPPTETSQRFIQSYVDLLFQIR 1596
Query: 191 SQPRTHPTTHANNVSNLPLIG------------TWIPPSDNQMKLSCDATWSDCRRQIGI 250
P+ + V +PL G W P D MKL+ D ++ + G+
Sbjct: 1597 QAPQADLVKGKHVVRTVPLKGGPKYRVLNNHQPCWERPKDGWMKLNVDGSFDASSGKGGL 1656
Query: 251 GWILRQSNDKPLVAGFKCIKRQWRISWLEALAICEGLRY-IPKQVVGVHIESDACNVVKL 310
G ILR S + K ++R E A EGL+ I ++ + +E+D +VV+L
Sbjct: 1657 GMILRNSAGDIIFTSCKPLERCNNPLESELRACVEGLKLAIHWTLLPIQVETDCASVVQL 1716
Query: 311 LTSNDEDITKISNFISEAKALIEAQNIVSIK 313
L D + ++N I EA+ L+ + ++SIK
Sbjct: 1717 LQGIGRDFSVLANIIHEARHLLVGERVISIK 1720
BLAST of Lcy03g005780 vs. ExPASy TrEMBL
Match:
A0A803QL79 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 100.5 bits (249), Expect = 1.4e-17
Identity = 82/312 (26.28%), Postives = 133/312 (42.63%), Query Frame = 0
Query: 11 VAQLIDNYGRWNEPLVRGSFTEEDAMRILNIPLSSLLKEDEVIWNLDSKGQFSVKSAYRD 70
VA LI + +WN + G F+ D IL IPLS +D +IW+ S G ++VK+ Y+
Sbjct: 23 VASLITDARQWNLEALHGHFSPPDVDNILTIPLSLFPTDDVLIWHYSSTGCYTVKTGYQF 82
Query: 71 KLESAEHLFWECKAIKGLWYNYFPSTKLICLDGKKGWTTQEYCESMWKGSKDGHLDEQRL 130
ES + A W+ F S KL W H+ +
Sbjct: 83 ATESQDTTAPSSSASADGWWQTFWSLKLQTKVRIFAWKAFHDALPTAAVLHYRHIASDSI 142
Query: 131 ------STSLVICWQIWDYRNSIYKRKQQPNLKMLKDRIDTYLEEFNCQGSQPRTHPTTH 190
+ I W IW RN+ Y K+ + +L D YL++++ +Q R+ T+
Sbjct: 143 CPLYLFELFITIMWCIWSERNAEYHGKKTKPVPLLLDYAVKYLKDYH--HAQTRSAATSQ 202
Query: 191 ------------ANNVSNLPLIGTWIPPSDNQMKLSCDATWSDCRRQIGIGWILRQSNDK 250
A + S P WI P Q+KL+ DA + IG+G +LR SN
Sbjct: 203 QLLSSSRPVNSTAASFSTTPTQPVWIAPPPGQLKLNTDAAINMSSSIIGLGAVLRDSNGI 262
Query: 251 PLVAGFKCIKRQWRISWLEALAICEGLRYIPKQVVGV-HIESDACNVVKLLTSNDEDITK 304
+ A IK +++ +EA A+ L+ + + + V HIE+D+ VV+ L ++
Sbjct: 263 IVAAMATSIKGRFKPEEMEASALSWSLKTLLQLQLPVHHIETDSLMVVQNLKKATTSLSA 322
BLAST of Lcy03g005780 vs. NCBI nr
Match:
XP_022154990.1 (uncharacterized protein LOC111022134 isoform X1 [Momordica charantia])
HSP 1 Score: 127.5 bits (319), Expect = 2.2e-25
Identity = 74/221 (33.48%), Postives = 115/221 (52.04%), Query Frame = 0
Query: 68 YRDKLESAEHLFWECKAIKGLWYNYFPSTKLICLDGKKGWTTQEYCESMWKGSKDGHLDE 127
+R K E+ +H+ WECK IK +W N P + WTT+EY E W K G +
Sbjct: 130 FRKKEETTQHILWECKVIKDIWINCTPIEANFFYIDRTNWTTKEYWE--WLMDKAGEEER 189
Query: 128 QRLSTSLVICWQIWDYRN-SIYK--RKQQPNLKMLKDR--IDTYLEEFNCQGSQPRTHPT 187
+R S++I QIW+ RN SI+K + ++++ DR I++ ++ N + HP
Sbjct: 190 RR---SMIIACQIWEMRNKSIFKGVHSETRDIQLAIDRYIINSAGQDTNLKRKSKDFHPI 249
Query: 188 THANNVSNLPLIGTWIPPSDNQMKLSCDATWSDCRRQIGIGWILRQSNDKPLVAGFKCIK 247
+ + W PP+ N KL+ DA W GIGWILR + + G + I+
Sbjct: 250 RRIGDNTR----ARWKPPTSNSWKLNTDAAWRADTNTDGIGWILRDEKGEVIKTGCRIIR 309
Query: 248 RQWRISWLEALAICEGLRYIPKQ-VVGVHIESDACNVVKLL 283
+ I++LE +AICEGLR I ++ +H+ESD+ + LL
Sbjct: 310 AERNITYLEVMAICEGLRAIRQEHCRPIHLESDSLEAIHLL 341
BLAST of Lcy03g005780 vs. NCBI nr
Match:
TXG71894.1 (hypothetical protein EZV62_000473 [Acer yangbiense])
HSP 1 Score: 117.1 bits (292), Expect = 3.0e-22
Identity = 92/332 (27.71%), Postives = 145/332 (43.67%), Query Frame = 0
Query: 11 VAQLIDNYGRWNEPLVRGSFTEEDAMRILNIPLSSLLKEDEVIWNLDSKGQFSVKSAYRD 70
V+ LI++ G+WNE L+R +F E+A IL+IPLS L+ D +W+ + G F+VKSAYR
Sbjct: 44 VSTLIESPGKWNESLIRRNFLPEEAELILSIPLSVYLRRDSFLWHFNKDGTFTVKSAYRV 103
Query: 71 KL----------------------ESAEHLFWECKAIKGLWYN--YFPSTKLICLDGKKG 130
+ E+ EH W CK++K W + F + +D G
Sbjct: 104 AISAMKRFEAFCSSALCPLCREGPETVEHALWRCKSVKPEWNHCPLFSDLNKLKIDDFLG 163
Query: 131 WTTQEYCESMWKGSKDGHLDEQRLSTSLVICWQIWDYRN-SIYKRKQQPNLKMLKDRIDT 190
+W S + + + + W +W+ RN S+++ K K D T
Sbjct: 164 -------RVIWVASV---ANLENVVNFITTAWLVWNNRNQSLFREK----AKCWGDSW-T 223
Query: 191 YLEEFNCQGSQPRTHPTTHANNVSNLP--LIGTWIPPSDNQMKLSCDATWSDCRRQIGIG 250
F G T NN S +P +I WIPPS +K++ DA R + +G
Sbjct: 224 KATLFLSGGKTIETQ-----NNSSAIPSLVIKNWIPPSFGTIKVNVDAALDVGRNKFSVG 283
Query: 251 WILRQSNDKPLVAGFKCIKRQWRISWLEALAICEGLRYIPKQ-VVGVHIESDACNVVKLL 310
++R S+ + L + + EA I EGL + + IESD+ NVV+L
Sbjct: 284 IVIRDSSGRILKSAALVFNGRTSTDIAEAKVIYEGLLLATSSGLQPLSIESDSLNVVRLC 343
Query: 311 TSNDEDITKISNFISEAKALIEAQNIVSIKYL 315
+ N I + + L+ + SI Y+
Sbjct: 344 NGEISTRNDVFNVICDIQFLLSRERKTSISYI 355
BLAST of Lcy03g005780 vs. NCBI nr
Match:
XP_024034843.1 (uncharacterized protein LOC112096145 [Citrus clementina])
HSP 1 Score: 116.7 bits (291), Expect = 3.9e-22
Identity = 83/303 (27.39%), Postives = 140/303 (46.20%), Query Frame = 0
Query: 3 HPNIHQ-FTVAQLIDNYGRWNEPLVRGSFTEEDAMRILNIPLSSLLKEDEVIWNLDSKGQ 62
H N+ + VA ID+ +W E + FT+E A +IL IPL +ED +IW D G
Sbjct: 39 HQNLTEGAVVADFIDDKNQWKEEKIEQCFTKEVAQKILKIPLPRTPQEDILIWQFDKHGC 98
Query: 63 FSVKSAYR--------DKLESAEHLFWECKAIKGLW--YNYFPSTKLICLDGKKGWTTQE 122
+SV+S Y+ D E ++ + KA + +W +++ KL+ Q+
Sbjct: 99 YSVRSGYQVALKMKFPDNPECSDSSKTQWKAARKVWKLTDFYEDVKLM---------AQQ 158
Query: 123 YCESMWKGSKDGHLDEQRLSTSLVICWQIWDYRNSIYKRKQQPNLKMLKDRIDTYLEEFN 182
SM +G ++ L + +CW IW RN +Q K+ R LE +
Sbjct: 159 GILSMLQGLA-SRRKKKELEQIIAVCWAIWYARNRFMYEGKQQEPKLTAARASAILETYR 218
Query: 183 CQGSQPRTHPTTHANNVSNLPLIGTWIPPSDNQMKLSCDATWSDCRRQIGIGWILRQSND 242
Q + H N + W PP D + K+ DA + G+G ++R SN+
Sbjct: 219 RIKIQNGPARSIHHRNSQQI-----WKPPPDGKYKVDVDAAIQMSGPKAGLGVVIRNSNE 278
Query: 243 KPLVAGFKCIKRQWRISWLEALAICEGLRYIPK-QVVGVHIESDACNVVKLLTSNDEDIT 294
K + A K + + ++ +EA AI G++ + + + + IESD+ VV+L+ + +T
Sbjct: 279 KIIAAAVKRVCYKGTVACMEAEAILFGIQVAQQAECLLMIIESDSIEVVELVLNRKGSMT 326
BLAST of Lcy03g005780 vs. NCBI nr
Match:
XP_015387358.1 (uncharacterized protein LOC107177672 [Citrus sinensis])
HSP 1 Score: 115.5 bits (288), Expect = 8.6e-22
Identity = 90/338 (26.63%), Postives = 150/338 (44.38%), Query Frame = 0
Query: 3 HPNI-HQFTVAQLIDNYGRWNEPLVRGSFTEEDAMRILNIPLSSLLKEDEVIWNLDSKGQ 62
H N+ VA ID+ +W E V F EE A RIL PL +ED +IW+ D G
Sbjct: 12 HQNLAENVVVADFIDDKNQWMEEKVVQCFPEEVAQRILRTPLPRTPQEDLMIWHFDKYGC 71
Query: 63 FSVKSAYR--------DKLESAEHLFWECKAI---KGLWYNYFPSTKLI----------- 122
+SV+S Y+ D E ++ + K I +W+ P +I
Sbjct: 72 YSVRSGYQVAVRMKFPDNPECSDSSKTQWKPIIYGGKMWWGIQPVKDVIVKVRMSLVLME 131
Query: 123 CLDGKKGW--TTQEYCESMWKGSKDGHLDEQRLSTSLVICWQIWDYRNSIYKRKQQPNLK 182
C +K W +Q SM + + ++ + L ICW IW RN +Q K
Sbjct: 132 CKAARKVWKLLSQHDILSMLQELASRRM-KKEIEQILAICWAIWYARNRFVIEGKQEEPK 191
Query: 183 MLKDRIDTYLEEFNCQGSQPRTHPTTHANNVSNLPLIGTWIPPSDNQMKLSCDATWSDCR 242
+ R +E + +Q + H N + W PP + K++ DA
Sbjct: 192 LTAARASAIVELYKRIKTQNGPARSIHYQNNQQI-----WTPPPQRKYKVNVDAAIQMAG 251
Query: 243 RQIGIGWILRQSNDKPLVAGFKCIKRQWRISWLEALAICEGLRYIPK-QVVGVHIESDAC 302
+ G+G ++R SN K + A K + Q ++ +EA A+ G++ + + + + IESD+
Sbjct: 252 LKAGLGAVVRNSNGKIIAAAVKKVCFQGTVASMEAEAVLFGIQVAQQVEYLPMIIESDST 311
Query: 303 NVVKLLTSNDEDITKISNFISEAKALIEAQNIVSIKYL 315
VV+L+ S +T++S + E K ++ N S++Y+
Sbjct: 312 EVVELVWSRKSSLTEVSWTVEEIKQQLQISNASSLQYV 343
BLAST of Lcy03g005780 vs. NCBI nr
Match:
XP_015383981.1 (uncharacterized protein LOC107176279 [Citrus sinensis])
HSP 1 Score: 113.2 bits (282), Expect = 4.3e-21
Identity = 88/343 (25.66%), Postives = 146/343 (42.57%), Query Frame = 0
Query: 3 HPNI-HQFTVAQLIDNYGRWNEPLVRGSFTEEDAMRILNIPLSSLLKEDEVIWNLDSKGQ 62
H N+ VA ID+ +W E V F EE A RIL PL +ED +IW+ D G
Sbjct: 56 HQNLAENAVVADFIDDKNQWMEEKVVQCFPEEVAQRILRTPLPRTPQEDLMIWHFDKYGC 115
Query: 63 FSVKSAYR----------DKLESAEHLFWECKAIKG-LWYNYFPSTKLI----------- 122
+SV+S Y+ + + W+ G +W+ P +I
Sbjct: 116 YSVRSGYQVAVRMKFPENPECSDSSKTQWKPIIYGGKMWWGIQPVKDVIVKVRMSLVLME 175
Query: 123 CLDGKKGWTTQEYCESMWKGSKDGHLD----------EQRLSTSLVICWQIWDYRNSIYK 182
C +K W ++ E M S+ L ++ + L ICW IW RN
Sbjct: 176 CKAARKVWKLTDFNEDMKLLSQHDILSMLQELASRRMKKEIEQILAICWAIWYARNRFVI 235
Query: 183 RKQQPNLKMLKDRIDTYLEEFNCQGSQPRTHPTTHANNVSNLPLIGTWIPPSDNQMKLSC 242
+Q K+ R +E + +Q + H N + W PP + + K++
Sbjct: 236 EGKQEEPKLTAARASAIVESYKRIKTQNGPARSIHYQNNQQI-----WTPPPEGKYKVNV 295
Query: 243 DATWSDCRRQIGIGWILRQSNDKPLVAGFKCIKRQWRISWLEALAICEGLRYIPK-QVVG 302
DA + G+G ++R SN K + A K + Q + +EA A+ G++ + + +
Sbjct: 296 DAAIQMAGLKAGLGAVVRNSNGKIIAAAVKKVCFQGTRASMEAEAVLFGIQVAQQVEYLP 355
Query: 303 VHIESDACNVVKLLTSNDEDITKISNFISEAKALIEAQNIVSI 312
+ IESD+ VV+L+ S +T++S + E K ++ N S+
Sbjct: 356 MIIESDSTEVVELVWSRKSSLTEVSWTVEEIKQQLQISNASSL 393
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DL64 | 1.1e-25 | 33.48 | uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
A0A5C7IST2 | 1.4e-22 | 27.71 | RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_000473 ... | [more] |
A0A803QGM9 | 6.6e-20 | 25.90 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
B8BN96 | 9.6e-19 | 25.38 | Reverse transcriptase domain-containing protein OS=Oryza sativa subsp. indica OX... | [more] |
A0A803QL79 | 1.4e-17 | 26.28 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_022154990.1 | 2.2e-25 | 33.48 | uncharacterized protein LOC111022134 isoform X1 [Momordica charantia] | [more] |
TXG71894.1 | 3.0e-22 | 27.71 | hypothetical protein EZV62_000473 [Acer yangbiense] | [more] |
XP_024034843.1 | 3.9e-22 | 27.39 | uncharacterized protein LOC112096145 [Citrus clementina] | [more] |
XP_015387358.1 | 8.6e-22 | 26.63 | uncharacterized protein LOC107177672 [Citrus sinensis] | [more] |
XP_015383981.1 | 4.3e-21 | 25.66 | uncharacterized protein LOC107176279 [Citrus sinensis] | [more] |
Match Name | E-value | Identity | Description | |