Lcy03g004840 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCGCCCCGCCTGAACATTCGTTGTGAAAAATCTCTGGACTGACTAAAACCCTAATTCCAACCTGAAGAAGCTGATTCAGAACTCTTTCATTTTCCCACAATGCGTTCGTCCTCTCGATTCCTAATCAATCTTTCCAAGAAAAACACTTGGAATCCCAATTTGTTCTTCCCCTGCGCTTCTTCCGATTACACTCCCCGTAACTGTCATTCGACTCTGTTACAGTCCCGATCCATCTTCTCCACGACGCAGCTTCATGGCTCATGGATGGACAAGATCAAGGGAGCCATCACTGGGAAGAAGAGCCCTCCTGAAGGATCCGATGTCACCTCCGAGTCCTTTACTCTCCTCCGTACGTCTCATATCCCATCACTTACGGTTACATTTCTTCAATTGCTCGATTTTGTACGTAAACATGCGACAGATCCATAGTTTATGGTCAGATTTAATTGTTTGTCTATTTATTTTTCTCAGGTTTTGCTGATGAGTTGAAAAATGCTCGTAGAGTGGGCGCATTCAAGCAATATATAGTGGGAAGAAGTAGTGAAGCTACTTTTGCGGATGCATTTGAGAAGCAGGAAGCCATCATTCGCTATTTGGGAGGTTTTGATCCCACTGGAGAGGTTGGTTTTTAGCAAGTTGCTTTCTAATTAAGTCATTCTGTCTGCCCATAACGTAATCCTCCTTGTACTGCCCATGTTTGGATTAATTTTAATCTTCTTCATATGAGCCACAGGTAAAGTAGAAAACAAGAGAAAAAAATGGACAATGAGATTACTTAGTTTAGGCCAAATTTAGAGTTGTGTGTTCACTGCTGAATAATTTGATCTGCCACCTTTTGTCATTCCACAGATTCAAAACATCTGAATAAGGTCTTTCTTTTCAATTTTTCTAGCATTTATTATTTTTCTTCTCTCAAACTCCCGATTAAAAAAAAAGTGACTGACTTCTAATATGCATATATATTTTTGAAAGGAAACAAAATGTCATTAATTCATTGAAATATAGGAAAAGGGAATGAAAGCTTTCACTGAGCCAGACTAATGTAACCAGAAAAACCTCCAACTAGCAAAAATCTCTGTTAAAGAATAATTGATTGTTAAACAGACCAAGAAGCCACAGAAAAGAAATGATTATGAATGGTAGTTTCTTTTGAACTAAAAAAAATGGTAGTTTCTTTCCAATCCACTCAAAATTTGATGGTTTCTCTCAATCCAAGTGTTCCATAAAAAACTTCTGATGATGTTGAGCCGAAGGATTTTAGCCTTTTGTAATTGCAGCCTCTCCATGATTATGAACGATTGGAAAGCCTTTCTTTAGTTTCTCTTGGGTAGAGGATCCCTCTTCCCTAGTGCTTAGGCTGTTATCGTCTCTCTTTTGTCTAATATACTCAAGTATCTTATCAAAAAAAAAAAAAAAAAACAAAAGGGACTGAAGGTTGGAAGTAGTACTGTTATCAAGTAGTAGGGCCAATCAAAGAGGCTAGAATTAGGTTCTAAAAAGCAGTCGAAAAATGACAACGTACAATAATGTGATCTTGTGATTCTGAATTTTCCTTTAGAAAGCACATCAATTTGGGGAGAGAGCTAGCCAAGAATTTATATCTTGAATTTTTTGGGTGTTAATGCTGTCTAAGTGATTTCTGAAATGATAATTTTGAATTTTTTTTGTTGTCTTTCCAAACCACTTTACAAATTTCAGATTTAGGATGTCCCTATTGATACCAAGGTCTCTAAAGAGAGAGCTGAACATAAAAAAGCCTGATAGGCCCAAATGTCAGGTCCAAGCATCAGTGGAATTAGTGGGAAACCATCCCTGCAATACGATTCAAGAGAGAGAGCCAATCCACATGTTTCTTTTTCTTTACATATCTCCTAAGGTTGTGATTCTAGATAGAAACTCGTTTTTCTATATTTGGGCTATGGATTTGTGGGCATCTGAAGATAGACCATATTCAGCAAGTGGGGGGCAAGGGTTGTACTCTCCAAAGGTCTTCCCAAAAAGTTGGTGACTGGCGTTGAGGCCATTGCTGTTATAGGTAAGATATTCCGGAAGTAATGAGGTTTTTTTTAACCTTCCTGGATTGTTTTATGAGTGATAAGTCGGCCACCATCTTCGGAGATAAGCCAAACTTAGCTATATTTACTTTTCTCCATAGGGCATTCTTTTCAAGAATATAGTGTTAGCTCCTTTTAGCAAGAAAAACCTGGTTTTTATGAGAAAAGGTTGCGCAAACCCAAACCCCTTGTTGAGAGTGGAGGCATGAAAATTTATTGCAATTTCCAAAATGGGGGCAAGGAAAGTTGTTGGCGCCTCTTCAGCAACCATTTCTGCGTTTTATGGTTTGAACTAGTTTTTTTAAAGTCCAACTAAAGCTTAATAGCCTTTTTGGGCTTAGAATAGAGAAAAATTTAAGAATAGAGATTTTGTAAGATATGACTGAGAGGCAGGACGCAGGAGTGTTGTAAAGAGTATGTTTTTAAATATAAAAATAAAAGGAAAGGACTTGAGGTGTTGAGGCATGCTCCTTGATGTGCTTCAGCGAGGGCACCATGCTTCAATGCCTCACTTTGTGGAAGGTGCACTTTTTAAAATACTGGGTTTGAAATTGATATAGTTGTTTCACGTTTGATACCACGACATTTGATAACCAAGAAGCTTATGAAATGCCTTTACATCCTAGATGGGTGGGACCAGCTTTGGGATTAATGATGACTTGGTTCAACAGGAAGGGCTTGCCGCTGTAATCTGGTCTTTGAGCTCTTCTATTGCTATTTATTTTCTTCAATTAAATTCTTAATTCTATTTTCTGCCAACTAACAGGCAGGCACGATTTAGGGTTGTTTCCATGCTCCTATAATGTTCTCCTTGTAGATGTTGAATTAACTTCATTTTCTGTCTATGATAACTCACTATCTGTGTTTTTTATCATCTGTGCCAGCAAAAATAAATAACAAATAGAGTAATAGTCAGTGTTTTCGAGGCGCACTCGGGCGCGCGCCTCAGGCGACGGGCGAGGTGATTTTGCCCGAGTGCGCCTCACTGAGTGTCCAGGCGAGTGCCTTCAATCGGGCGCTCGCCTGGGCGCGCCTTTGTGCGCTTAGGAGCGCCTGTCGCCTGATGCAAGGCGATCGCCTCGTTGAAGTGAGGCGATCTGTCCCCTTTTTTTTTTTAAAAAAAAAATCATTTAAAGCTTAAAAAAAAACAAAACCCTCTCTCAAACCCTAACCCTTTCCTTCGCCAAAAAAACCCTAACCATTCGAAAAAATGAATAAGAGTGGAGAAGAAACAAAGAAGAAGAAGAAAGTAGAAATAAAGAAAAAGAAGAAAGAAGTTGAAGAAAGAAACGAAGAAGATGAAGAGGTAGAAGCGGCTAGGGTTGGATGTTGATGAGAAGTAAACAAAAAATTAGGGCTTCACTTAGAATTCTATTTATTAGGAGAGAAAATTAGGTTGGATTGGGTTTAATTAGGTTGGGCTAGCATTAATTCTATTTACTAGGAGTGAGAAAATTAGGTTGGACTGGCATTAATTCTATATACTATGAGAGAGAAAATGGAAGGTGAAAGGCCTTCGTTAGAAATTAAAAATAAAAACTTACAGAATTATTTACCTATATATATATATAATTTTTTATTTAAATATTTATTAAAAATTTATATATCTTGTTAACATTTACTATGACACTATTCTGATATTGATTTTTTAAACTATGTTTACTATATAAATTTATGCACTATATATATAAATTTTTATTTATTTATTAAGGTGCGCCTCGCTTCACTCGGGCGTCGCCTTTTTATCGCCTCTCGCCTTCGGGCGACCAAAGGGCTCGTCGCCTCGAGGTGCGCCTTGCGCCTTGAAAACACTGGTAATAGTTTGAAAAACAACTAGCTGGGTTCTTTTTAGAATTCTTTCATTCTCTTAGAAAAGAAAGAAATGTTTTTTTTTGCATTCTGCATTCTCTAACCTTTATTTATTCCCAACTGTTACTATATTAATTTGCGCTTCTGGATAAGTTTTCTGATTGTGATCTTAGGCTTCCTGATCTTTAGAACATCCAAACCAGCCAAAAGCAAGAAGCAGCAAAAAATTGTAACTGCACGATTGCTGATGTTGAGAATGTGCTGGCGAAGTTTATCTGGGCTAAAGAAGCACAAAAGAAGATCGAGAAGTTAAAGGAAGAAGGAAAACCTTTGCCAAAGAGCATTTCTGAGGTAGAACTTTATATGTGTATTTCCCTGTTCTAAAGAACTAAAGTTTACTGTCAAGATTACTTTATCTAGCCAAACAATGTAGTTATTCGTACGGATGTATTGCATTTTTTTTAATTACTAAGACACTCAGTTTCTTCTGCTTTTGTACCCCTGGGAGGACTGGAGAGCGGCTTGGAGTTCCTTCTGTCCTGGCTCCTGCTTCTTGCTTCCTGCATATTTTTATACTTTCTATAAATATATTTGTTTCAATTTTAAAAGAATTGTGTCAATGCTCAACTAATTATCTCTTTTACAAATTATGTTTATTAGGTCCAGAAACTGGTGGGCACAAATCCATTGGATCTTGCTAGGTCAAATTTGGCTAAGAGTGGCCAGATCAGCCGGAATGCGCTGTGTCCTTGCGGTTCCAAGAAGAGATATAAACGGTATTTAATTTAGAACCATTTACCAGTTTTCCGTTGATTGTTAATTGAATTATATTAGTACCTAGATTGTTTCTTTGTTGAACTAACTATTAGTCCTCAAATCATAGCTTAAAAAAAATCAAAACCAGAAACAAGTTCATCATCTTTTGTGAGTTATTAGTTATTATGCAATATACCTCGAGAGTTATGCTTTAGCTGGTTTAGGATAGAACTTCGGTTGTTTGATGATGTAACTGTTCAGAAATTGAGCTTAGGAATGCCAATCATTTTTGTAACCTAACTGATGGTTCCAAATCACTGTTATAAGTCCGTTGAACTTCTACTTGGCCACTCAAAACCTTTCACCACAGCCACACCTTTAGATATTTTCTGTTCCAGTCTCCTCATTCTTAACTTCTTTGGAATCTGGATTGATTCACAATAAGATTAGTGGCTAAGTTTATAGTCGTATATCCCAATAATACTCTTGGTAGATGGTAGTTGGCACAGCAAACTACCAAGTATTTTGATACTGTAAAGCTTTTCCTGTTATGTTCAGCTTCAGATTTCTCTCGTTTTTGGCATTTGATATGGAAATATAAATATTCATGTTATATACTTGATGAGCACCTTATGTTGCCATTATTATTTTTCCTCCGGCATCTATCTTATTAGCTCACATACTCCCAAAATGAGCGGCTGCATTATCTCGTTTAACTGAAAGTCTTAATTATTGAAATGATATTTTCATGTGTTTATGAAAACGAAAATGATACTCTCCCGTTCCCTTCCCGAAAGCTCGATAAATATTTGCTTGAAATGTAACTCCATAATCATCCAGTTTTATCCTTCCCAACTCGTTGCGGAACGGGCACCATGATTTTCTATGAAGATTTGGCTCCTGGCTCGTCTTTCCCTTCTCAAATCAGATTTTGATTTTTGAAGTGTTGGGTTTTTTTTTTTTTTTTGGCAAAATATTAGAAGTGAAGTCCCAAAGTTAAAGGAAGTGATGGACTCCAAGTACTATAAAAGGAGCCTATGACTTTGGTTTCAAAGCATCTCATTTAGATTCACTTTAAGTTTGGTATACGTAACTCTAGTAGTGTGAGTATACTAACTCTAGTAGTGTGAGTGGTATAAAGCTTTGAGAGAGTGTTTCTTGTAATTGGGGTTGAGAGAGAATTCTGTGATTGTAAAATTTTTTCACATAGTGGATTTCTTCCTGTGGGCTGTGGTTTTTTCTCCGCTTTGGAGTTTCCACATAAATTCTTGTGTTTCTTATTTTGTTGCTTTATTTTAATTTCTCAGTTATTTTTCTGCTTATTCCTGCGATAGAATTGAGGTTTTTTCCAACATGAAGATGTGTAAATACTTTTGTTTAGCTTGGATTTTTTTATTACTGCAATTGTTTTTGTTGTTTTGAAGGTGCTGCGGGAAGGATCAAACGGTATAGGAAGAGAACTTGTATGTGCCTTTCTGTATTTTTGACTGAATAATTTTCGGTTCATGGGAAATCTGTTAGATTGGACATTCAATTTTATTTTCTGGTTGGTTAAACCATTCAGTGATGAGATGGTGAGATTCTTCTTTCAGCGCCTGGATGATTAATAACCACATCAAATTCTATTTGAAATGAGTTGGACCTAGCTTATCTGTGTATTGACTACTGCTGAAGATTATGTAAACCGGCAGTAGTGTGTTTCGGATAGCTTTTTAGAAAAAGCTTTGTTTTCTGAATTGGAAGGAA CCCGCCCCGCCTGAACATTCGTTGTGAAAAATCTCTGGACTGACTAAAACCCTAATTCCAACCTGAAGAAGCTGATTCAGAACTCTTTCATTTTCCCACAATGCGTTCGTCCTCTCGATTCCTAATCAATCTTTCCAAGAAAAACACTTGGAATCCCAATTTGTTCTTCCCCTGCGCTTCTTCCGATTACACTCCCCGTAACTGTCATTCGACTCTGTTACAGTCCCGATCCATCTTCTCCACGACGCAGCTTCATGGCTCATGGATGGACAAGATCAAGGGAGCCATCACTGGGAAGAAGAGCCCTCCTGAAGGATCCGATGTCACCTCCGAGTCCTTTACTCTCCTCCGTTTTGCTGATGAGTTGAAAAATGCTCGTAGAGTGGGCGCATTCAAGCAATATATAGTGGGAAGAAGTAGTGAAGCTACTTTTGCGGATGCATTTGAGAAGCAGGAAGCCATCATTCGCTATTTGGGAGGTTTTGATCCCACTGGAGAGAACATCCAAACCAGCCAAAAGCAAGAAGCAGCAAAAAATTGTAACTGCACGATTGCTGATGTTGAGAATGTGCTGGCGAAGTTTATCTGGGCTAAAGAAGCACAAAAGAAGATCGAGAAGTTAAAGGAAGAAGGAAAACCTTTGCCAAAGAGCATTTCTGAGGTCCAGAAACTGGTGGGCACAAATCCATTGGATCTTGCTAGGTCAAATTTGGCTAAGAGTGGCCAGATCAGCCGGAATGCGCTGTGTCCTTGCGGTTCCAAGAAGAGATATAAACGGTGCTGCGGGAAGGATCAAACGGTATAGGAAGAGAACTTGTATGTGCCTTTCTGTATTTTTGACTGAATAATTTTCGGTTCATGGGAAATCTGTTAGATTGGACATTCAATTTTATTTTCTGGTTGGTTAAACCATTCAGTGATGAGATGGTGAGATTCTTCTTTCAGCGCCTGGATGATTAATAACCACATCAAATTCTATTTGAAATGAGTTGGACCTAGCTTATCTGTGTATTGACTACTGCTGAAGATTATGTAAACCGGCAGTAGTGTGTTTCGGATAGCTTTTTAGAAAAAGCTTTGTTTTCTGAATTGGAAGGAA ATGCGTTCGTCCTCTCGATTCCTAATCAATCTTTCCAAGAAAAACACTTGGAATCCCAATTTGTTCTTCCCCTGCGCTTCTTCCGATTACACTCCCCGTAACTGTCATTCGACTCTGTTACAGTCCCGATCCATCTTCTCCACGACGCAGCTTCATGGCTCATGGATGGACAAGATCAAGGGAGCCATCACTGGGAAGAAGAGCCCTCCTGAAGGATCCGATGTCACCTCCGAGTCCTTTACTCTCCTCCGTTTTGCTGATGAGTTGAAAAATGCTCGTAGAGTGGGCGCATTCAAGCAATATATAGTGGGAAGAAGTAGTGAAGCTACTTTTGCGGATGCATTTGAGAAGCAGGAAGCCATCATTCGCTATTTGGGAGGTTTTGATCCCACTGGAGAGAACATCCAAACCAGCCAAAAGCAAGAAGCAGCAAAAAATTGTAACTGCACGATTGCTGATGTTGAGAATGTGCTGGCGAAGTTTATCTGGGCTAAAGAAGCACAAAAGAAGATCGAGAAGTTAAAGGAAGAAGGAAAACCTTTGCCAAAGAGCATTTCTGAGGTCCAGAAACTGGTGGGCACAAATCCATTGGATCTTGCTAGGTCAAATTTGGCTAAGAGTGGCCAGATCAGCCGGAATGCGCTGTGTCCTTGCGGTTCCAAGAAGAGATATAAACGGTGCTGCGGGAAGGATCAAACGGTATAG MRSSSRFLINLSKKNTWNPNLFFPCASSDYTPRNCHSTLLQSRSIFSTTQLHGSWMDKIKGAITGKKSPPEGSDVTSESFTLLRFADELKNARRVGAFKQYIVGRSSEATFADAFEKQEAIIRYLGGFDPTGENIQTSQKQEAAKNCNCTIADVENVLAKFIWAKEAQKKIEKLKEEGKPLPKSISEVQKLVGTNPLDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKDQTV Homology
BLAST of Lcy03g004840 vs. ExPASy Swiss-Prot
Match: A6TLE7 (Protein translocase subunit SecA 1 OS=Alkaliphilus metalliredigens (strain QYMF) OX=293826 GN=secA1 PE=3 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.5e-04 Identity = 40/160 (25.00%), Postives = 72/160 (45.00%), Query Frame = 0
BLAST of Lcy03g004840 vs. ExPASy Swiss-Prot
Match: B9M3K9 (Protein translocase subunit SecA OS=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) OX=316067 GN=secA PE=3 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 4.5e-04 Identity = 33/101 (32.67%), Postives = 50/101 (49.50%), Query Frame = 0
BLAST of Lcy03g004840 vs. ExPASy Swiss-Prot
Match: A4J927 (Protein translocase subunit SecA OS=Desulfotomaculum reducens (strain MI-1) OX=349161 GN=secA PE=3 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 5.9e-04 Identity = 36/163 (22.09%), Postives = 72/163 (44.17%), Query Frame = 0
BLAST of Lcy03g004840 vs. ExPASy Swiss-Prot
Match: A5GEX9 (Protein translocase subunit SecA OS=Geobacter uraniireducens (strain Rf4) OX=351605 GN=secA PE=3 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 7.7e-04 Identity = 33/101 (32.67%), Postives = 49/101 (48.51%), Query Frame = 0
BLAST of Lcy03g004840 vs. ExPASy TrEMBL
Match: A0A1S3BPC0 (protein translocase subunit SecA OS=Cucumis melo OX=3656 GN=LOC103492237 PE=4 SV=1) HSP 1 Score: 424.1 bits (1089), Expect = 3.8e-115 Identity = 210/234 (89.74%), Postives = 221/234 (94.44%), Query Frame = 0
BLAST of Lcy03g004840 vs. ExPASy TrEMBL
Match: A0A0A0LWL6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G573720 PE=4 SV=1) HSP 1 Score: 416.8 bits (1070), Expect = 6.1e-113 Identity = 205/234 (87.61%), Postives = 220/234 (94.02%), Query Frame = 0
BLAST of Lcy03g004840 vs. ExPASy TrEMBL
Match: A0A6J1EXB8 (uncharacterized protein LOC111439055 OS=Cucurbita moschata OX=3662 GN=LOC111439055 PE=4 SV=1) HSP 1 Score: 416.0 bits (1068), Expect = 1.0e-112 Identity = 209/233 (89.70%), Postives = 221/233 (94.85%), Query Frame = 0
BLAST of Lcy03g004840 vs. ExPASy TrEMBL
Match: A0A6J1DQ67 (uncharacterized protein LOC111022549 OS=Momordica charantia OX=3673 GN=LOC111022549 PE=4 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 6.3e-110 Identity = 206/234 (88.03%), Postives = 221/234 (94.44%), Query Frame = 0
BLAST of Lcy03g004840 vs. ExPASy TrEMBL
Match: A0A5D3CG47 (Protein translocase subunit SecA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003190 PE=4 SV=1) HSP 1 Score: 405.2 bits (1040), Expect = 1.8e-109 Identity = 202/226 (89.38%), Postives = 213/226 (94.25%), Query Frame = 0
BLAST of Lcy03g004840 vs. NCBI nr
Match: XP_008450751.1 (PREDICTED: protein translocase subunit SecA [Cucumis melo]) HSP 1 Score: 424.1 bits (1089), Expect = 7.9e-115 Identity = 210/234 (89.74%), Postives = 221/234 (94.44%), Query Frame = 0
BLAST of Lcy03g004840 vs. NCBI nr
Match: XP_038878551.1 (protein translocase subunit SecA 1 [Benincasa hispida]) HSP 1 Score: 422.5 bits (1085), Expect = 2.3e-114 Identity = 209/234 (89.32%), Postives = 223/234 (95.30%), Query Frame = 0
BLAST of Lcy03g004840 vs. NCBI nr
Match: XP_023530731.1 (uncharacterized protein LOC111793188 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 418.7 bits (1075), Expect = 3.3e-113 Identity = 211/233 (90.56%), Postives = 221/233 (94.85%), Query Frame = 0
BLAST of Lcy03g004840 vs. NCBI nr
Match: XP_004135658.1 (uncharacterized protein LOC101217561 [Cucumis sativus] >KGN66153.1 hypothetical protein Csa_007485 [Cucumis sativus]) HSP 1 Score: 416.8 bits (1070), Expect = 1.3e-112 Identity = 205/234 (87.61%), Postives = 220/234 (94.02%), Query Frame = 0
BLAST of Lcy03g004840 vs. NCBI nr
Match: XP_022932559.1 (uncharacterized protein LOC111439055 [Cucurbita moschata]) HSP 1 Score: 416.0 bits (1068), Expect = 2.1e-112 Identity = 209/233 (89.70%), Postives = 221/233 (94.85%), Query Frame = 0
BLAST of Lcy03g004840 vs. TAIR 10
Match: AT3G04950.1 (CONTAINS InterPro DOMAIN/s: SEC-C motif (InterPro:IPR004027); Has 583 Blast hits to 583 proteins in 248 species: Archae - 0; Bacteria - 488; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). ) HSP 1 Score: 286.2 bits (731), Expect = 2.4e-77 Identity = 142/192 (73.96%), Postives = 163/192 (84.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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