Lcy03g004490 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGTGGCTTTTCTCAATGATACAACACTGACAAATTTCATTAACGATACAAAGATATTCGAAGATTGCGTCAAGGAGAGCTTTAAGAAGCTTGACGTGGACGGGGATGGCTACCTCAACGCCGATGAACTTGGCGTCGAGTTTTGCAATCAATCATTAGATCCGATGAAAGATATCTATGAGGTTGTTTGTCATAAGTTTCAAGTGGACAAAAATGGTGGAATTGATGTAAAGGGGTTTACGTCAATAATAAGGGACATTCTACTTGCCATGGCTCAAGGGATTGGAAACTTGCCAATCCAAGTTGCACTTCAACAAGATAGTTTTCTCACGAAGGCTGTTGAGCATGAAAAGAAGAAGAAAGGAGAAAAATAGGAAAAACTATTTCCCTCTCAGAAGAAAAACTTCCATGATTTTCCTTGCCTATGTTCTTAGAAATAGGTACCATGATCCAATTGGATAGTCAAGATTTAGAACAGTTTTCCCAACCACATACTAATCATTTTCTTTTAAATTATCTAACTTTTATTATGAGTCGTTTGTTTTGTGCTAATCTTAG ATGAGTGTGGCTTTTCTCAATGATACAACACTGACAAATTTCATTAACGATACAAAGATATTCGAAGATTGCGTCAAGGAGAGCTTTAAGAAGCTTGACGTGGACGGGGATGGCTACCTCAACGCCGATGAACTTGGCGTCGAGTTTTGCAATCAATCATTAGATCCGATGAAAGATATCTATGAGGTTGTTTGTCATAAGTTTCAAGTGGACAAAAATGGTGGAATTGATGTAAAGGGGTTTACGTCAATAATAAGGGACATTCTACTTGCCATGGCTCAAGGGATTGGAAACTTGCCAATCCAAGTTGCACTTCAACAAGATAGTTTTCTCACGAAGGCTGTTGAGCATGAAAAGAAGAAGAAAGGAGAAAAATAGGAAAAACTATTTCCCTCTCAGAAGAAAAACTTCCATGATTTTCCTTGCCTATGTTCTTAGAAATAGGTACCATGATCCAATTGGATAGTCAAGATTTAGAACAGTTTTCCCAACCACATACTAATCATTTTCTTTTAAATTATCTAACTTTTATTATGAGTCGTTTGTTTTGTGCTAATCTTAG ATGAGTGTGGCTTTTCTCAATGATACAACACTGACAAATTTCATTAACGATACAAAGATATTCGAAGATTGCGTCAAGGAGAGCTTTAAGAAGCTTGACGTGGACGGGGATGGCTACCTCAACGCCGATGAACTTGGCGTCGAGTTTTGCAATCAATCATTAGATCCGATGAAAGATATCTATGAGGTTGTTTGTCATAAGTTTCAAGTGGACAAAAATGGTGGAATTGATGTAAAGGGGTTTACGTCAATAATAAGGGACATTCTACTTGCCATGGCTCAAGGGATTGGAAACTTGCCAATCCAAGTTGCACTTCAACAAGATAGTTTTCTCACGAAGGCTGTTGAGCATGAAAAGAAGAAGAAAGGAGAAAAATAG MSVAFLNDTTLTNFINDTKIFEDCVKESFKKLDVDGDGYLNADELGVEFCNQSLDPMKDIYEVVCHKFQVDKNGGIDVKGFTSIIRDILLAMAQGIGNLPIQVALQQDSFLTKAVEHEKKKKGEK Homology
BLAST of Lcy03g004490 vs. ExPASy TrEMBL
Match: A0A0A0LYD8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G695380 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 2.5e-41 Identity = 91/127 (71.65%), Postives = 105/127 (82.68%), Query Frame = 0
BLAST of Lcy03g004490 vs. ExPASy TrEMBL
Match: A0A5A7VAA7 (Calcium-binding EF hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G00860 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 3.7e-40 Identity = 91/127 (71.65%), Postives = 103/127 (81.10%), Query Frame = 0
BLAST of Lcy03g004490 vs. ExPASy TrEMBL
Match: A0A1S3CI80 (uncharacterized protein LOC103501058 OS=Cucumis melo OX=3656 GN=LOC103501058 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 3.7e-40 Identity = 91/127 (71.65%), Postives = 103/127 (81.10%), Query Frame = 0
BLAST of Lcy03g004490 vs. ExPASy TrEMBL
Match: A0A5D3B8A7 (Calcium-binding EF hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1348G00080 PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.8e-39 Identity = 89/127 (70.08%), Postives = 102/127 (80.31%), Query Frame = 0
BLAST of Lcy03g004490 vs. ExPASy TrEMBL
Match: A0A6J1DWE2 (uncharacterized protein LOC111025096 OS=Momordica charantia OX=3673 GN=LOC111025096 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 2.3e-34 Identity = 77/122 (63.11%), Postives = 97/122 (79.51%), Query Frame = 0
BLAST of Lcy03g004490 vs. NCBI nr
Match: XP_004142569.1 (uncharacterized protein LOC101222885 [Cucumis sativus] >KGN66803.1 hypothetical protein Csa_006967 [Cucumis sativus]) HSP 1 Score: 177.9 bits (450), Expect = 5.3e-41 Identity = 91/127 (71.65%), Postives = 105/127 (82.68%), Query Frame = 0
BLAST of Lcy03g004490 vs. NCBI nr
Match: XP_008462771.1 (PREDICTED: uncharacterized protein LOC103501058 [Cucumis melo] >KAA0062591.1 calcium-binding EF hand family protein [Cucumis melo var. makuwa]) HSP 1 Score: 174.1 bits (440), Expect = 7.6e-40 Identity = 91/127 (71.65%), Postives = 103/127 (81.10%), Query Frame = 0
BLAST of Lcy03g004490 vs. NCBI nr
Match: TYJ95513.1 (calcium-binding EF hand family protein [Cucumis melo var. makuwa]) HSP 1 Score: 171.8 bits (434), Expect = 3.8e-39 Identity = 89/127 (70.08%), Postives = 102/127 (80.31%), Query Frame = 0
BLAST of Lcy03g004490 vs. NCBI nr
Match: XP_022158640.1 (uncharacterized protein LOC111025096 [Momordica charantia]) HSP 1 Score: 154.8 bits (390), Expect = 4.8e-34 Identity = 77/122 (63.11%), Postives = 97/122 (79.51%), Query Frame = 0
BLAST of Lcy03g004490 vs. NCBI nr
Match: XP_034925333.1 (uncharacterized protein LOC118056988 [Populus alba]) HSP 1 Score: 115.9 bits (289), Expect = 2.5e-22 Identity = 56/126 (44.44%), Postives = 82/126 (65.08%), Query Frame = 0
BLAST of Lcy03g004490 vs. TAIR 10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 75.5 bits (184), Expect = 3.4e-14 Identity = 43/136 (31.62%), Postives = 75/136 (55.15%), Query Frame = 0
BLAST of Lcy03g004490 vs. TAIR 10
Match: AT1G54530.1 (Calcium-binding EF hand family protein ) HSP 1 Score: 67.4 bits (163), Expect = 9.3e-12 Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 0
BLAST of Lcy03g004490 vs. TAIR 10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein ) HSP 1 Score: 46.6 bits (109), Expect = 1.7e-05 Identity = 33/113 (29.20%), Postives = 53/113 (46.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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