Lcy03g004160 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCACTCGTTCCGTGCAGAATAAGAATTTAAGATACAATCTTGAGATCACATGGGAAGAGCGACGCCTGAGGAGGCGAGCCAAGTGCAGAGAGAGCGAGAGAAGAGAACCTATTCACTTTCCTGAGATGGGTGACCAGACGCTCAGACATATGGTAGGGCCTGATTTAAATCAGCAGCCCCTCTGTATCACCTACCTTGAAATAGAAGGTACCTTCGAACTTAAATCCGGTTTGATCCACCTACTGCCTATCTTTCGTGGTAGTGCGCATGAGAAGATCCACATTAGCATCTGAAGGATTTCCATATCGTGTGCTCTGGTATGAGGCCACACGAAGTCACAGAGGAGGCTATCAACCTAAGGGCATTTTTGAAAGTGTTAATATCTAAATTACGGAAGCAATTTTGAATCTTAGGCACTTAATAAGCTCAATTTAATCAATCTTTACATGTTGTTCATGAGAAGAAAACACAGAGACAGAATACCAACCTCTTTTACATGGAGAAATTGGTTGGATTCTTTTGTTGTTTTTCTTCACCAATCAATCACGAACCACCACTGCATCTTCCTTGCTGTCCTCAAGCCTTTGAAACGGATTGTGGGATCCTCTTGTGATGGAATTTGAAGGGAAAAGCTTGAAGAACAAGCTTATGGAGGTGGGTTTGGTCTGGCAGCAATTCACTATCTGATTCAATTAGTTGTTCCAGCCTTTTTCTTCCCTTTTATAGAGGGATCAAAGATGAAGAAAAGCCCCTGAGATTGACACCAATTCAGCCACTAATTAGTGGGAAATGGTGTGGCTTAAGAGAGGGGAGTGCATGAGTTTAGTCACCATGCACTCCACCTCCAAAAAATCAAATTATTTTGATTTTAACTAATTCAAGATAATCTTGAATTAATTTGTTTAATTATTTAATTTTTAATAATCTGAAATTTTTAAAATCAAATTTTAATTTTTCAATGTTAGATTAATTCAAAATTAATTTAAAATAATTATTAATCAAGTAATTATTAATTAATTTAATATCCAATATCAAATTAATATTTTGCCATCAACCCCGAACATTTCTGAAATGTTATTTTTCAACCATGAATCCCTATTCATGTTCTCGATATTTAAATCCTATTTAAATATTAAATCTCTCATAAACCCGATCTACACAAAACTCGACGTATCGATAACATCAACCACCTCTAACCATATCCCTAAACTGAATTCAAAGTAATTCATATTCTATCTGTCATATTGTTTCAAACGTTAGTCTCAAGCTAGCAAGGGGATCTAATGGACCTACAGATCATGGGTTCCAACGGTACGAGGTTTAATCGATTAAACCCTTTTAACCTAGCTAACCAACATCCGTTAACTACCGGGACACTCCACTATATCCTAGTAGTTGAACTCCCTTCACTGTAGATATATTTGCGTCCACTTGATGTAACCATGATCAGTAAGTCAATCCTTCACAAGTCGCTCGTTACTATAGCTAGGTCAAATGTTCGTTTTACCCCTATAGTACATCTTAGTTCTTTATGTCCACTGGTCTTCTAATGAACAATTTGTTTATGGTCCAACCACTAAACAAAGTCCCTCTCGGGCCAATGAGAGGGTGGGGCCCCTTGTTCAAGCCTTGGATTCAGCACTTAAGTGAACAACCTCTCTACTATTCCTAAATTGGGTAAGAGTGAATTCCGTCTTGATTTACTATGTCCCTAGCTATCCATCTAGTCTTATCTCCAAAATTGTAGGTTTATTGAATGACACTTTTGAACCACTCTCACCCATGCAGATCAAAAGATAATCCTAAATGAACAGGAGTTCACAGCAAGCTCAGGATTAAGATCGAGTTACCTAGGTCATCTCATGAAATAGTCAGTCTTAACAATAAACGATGTTATAAAGTAAGAGTGACTTATTTCTCGATCCTGTCTTGTGTAAGTGAAATGCGCTCTGAACTATCTAATTTAGCTAAGCTTGTTCGTTCTACGTGTGTAGGTAAGACACAGGTAAAGGCTTGTGGGTTGTGTTCGATGACCTCCCACACTACTGATGAATGTCTCCAGCTCGAAGAGAGCAGTGAAGTCAATGCCATAGGAGGCTATGCTGTGAACAACGAAAACCAAAGGCCCTACAATCCATACGAGAGCACCTATAATCCGGGGTGGCGTGACCATCCAAACTTCAACTATGGGAATCAAAAGTCCAAGGTGTTCAAGCAGAACCAAGCCACAAGTTCCTCTTCAAGTAAGTCTTTAGATGAGATCGTTGAGGAGCTTGCTGACAGTTCTTTGCAGTTCCAGAAGGAAACCAGGAACACAATTCAGAACCTAGGGAGTCAGATGACTCAAATGGCCACATAA ATGATCACTCGTTCCGTGCAGAATAAGAATTTAAGATACAATCTTGAGATCACATGGGAAGAGCGACGCCTGAGGAGGCGAGCCAAGTGCAGAGAGAGCGAGAGAAGAGAACCTATTCACTTTCCTGAGATGGGTGACCAGACGCTCAGACATATGGTAGGGCCTGATTTAAATCAGCAGCCCCTCTGTATCACCTACCTTGAAATAGAAGGTAAGACACAGGTAAAGGCTTGTGGGTTGTGTTCGATGACCTCCCACACTACTGATGAATGTCTCCAGCTCGAAGAGAGCAGTGAAGTCAATGCCATAGGAGGCTATGCTGTGAACAACGAAAACCAAAGGCCCTACAATCCATACGAGAGCACCTATAATCCGGGGTGGCGTGACCATCCAAACTTCAACTATGGGAATCAAAAGTCCAAGGTGTTCAAGCAGAACCAAGCCACAAGTTCCTCTTCAAGTAAGTCTTTAGATGAGATCGTTGAGGAGCTTGCTGACAGTTCTTTGCAGTTCCAGAAGGAAACCAGGAACACAATTCAGAACCTAGGGAGTCAGATGACTCAAATGGCCACATAA ATGATCACTCGTTCCGTGCAGAATAAGAATTTAAGATACAATCTTGAGATCACATGGGAAGAGCGACGCCTGAGGAGGCGAGCCAAGTGCAGAGAGAGCGAGAGAAGAGAACCTATTCACTTTCCTGAGATGGGTGACCAGACGCTCAGACATATGGTAGGGCCTGATTTAAATCAGCAGCCCCTCTGTATCACCTACCTTGAAATAGAAGGTAAGACACAGGTAAAGGCTTGTGGGTTGTGTTCGATGACCTCCCACACTACTGATGAATGTCTCCAGCTCGAAGAGAGCAGTGAAGTCAATGCCATAGGAGGCTATGCTGTGAACAACGAAAACCAAAGGCCCTACAATCCATACGAGAGCACCTATAATCCGGGGTGGCGTGACCATCCAAACTTCAACTATGGGAATCAAAAGTCCAAGGTGTTCAAGCAGAACCAAGCCACAAGTTCCTCTTCAAGTAAGTCTTTAGATGAGATCGTTGAGGAGCTTGCTGACAGTTCTTTGCAGTTCCAGAAGGAAACCAGGAACACAATTCAGAACCTAGGGAGTCAGATGACTCAAATGGCCACATAA MITRSVQNKNLRYNLEITWEERRLRRRAKCRESERREPIHFPEMGDQTLRHMVGPDLNQQPLCITYLEIEGKTQVKACGLCSMTSHTTDECLQLEESSEVNAIGGYAVNNENQRPYNPYESTYNPGWRDHPNFNYGNQKSKVFKQNQATSSSSSKSLDEIVEELADSSLQFQKETRNTIQNLGSQMTQMAT Homology
BLAST of Lcy03g004160 vs. ExPASy TrEMBL
Match: A0A1U8Q0P7 (uncharacterized protein LOC104587430 OS=Nelumbo nucifera OX=4432 GN=LOC104587430 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 3.8e-20 Identity = 66/128 (51.56%), Postives = 84/128 (65.62%), Query Frame = 0
BLAST of Lcy03g004160 vs. ExPASy TrEMBL
Match: A0A2G9G7U9 (DNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26122 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 4.9e-20 Identity = 66/132 (50.00%), Postives = 89/132 (67.42%), Query Frame = 0
BLAST of Lcy03g004160 vs. ExPASy TrEMBL
Match: A0A1U8ARH5 (uncharacterized protein LOC104605763 OS=Nelumbo nucifera OX=4432 GN=LOC104605763 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.1e-19 Identity = 71/156 (45.51%), Postives = 92/156 (58.97%), Query Frame = 0
BLAST of Lcy03g004160 vs. ExPASy TrEMBL
Match: A0A2G9I3Q1 (Retrotrans_gag domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02876 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 3.2e-19 Identity = 65/158 (41.14%), Postives = 92/158 (58.23%), Query Frame = 0
BLAST of Lcy03g004160 vs. ExPASy TrEMBL
Match: A0A1U7ZEK1 (uncharacterized protein LOC104589313 OS=Nelumbo nucifera OX=4432 GN=LOC104589313 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 5.5e-19 Identity = 65/127 (51.18%), Postives = 82/127 (64.57%), Query Frame = 0
BLAST of Lcy03g004160 vs. NCBI nr
Match: XP_019157176.1 (PREDICTED: uncharacterized protein LOC109153766 [Ipomoea nil]) HSP 1 Score: 116.7 bits (291), Expect = 2.2e-22 Identity = 67/141 (47.52%), Postives = 98/141 (69.50%), Query Frame = 0
BLAST of Lcy03g004160 vs. NCBI nr
Match: XP_019155105.1 (PREDICTED: uncharacterized protein LOC109151969 [Ipomoea nil]) HSP 1 Score: 112.5 bits (280), Expect = 4.1e-21 Identity = 64/141 (45.39%), Postives = 94/141 (66.67%), Query Frame = 0
BLAST of Lcy03g004160 vs. NCBI nr
Match: XP_019178826.1 (PREDICTED: uncharacterized protein LOC109173960 [Ipomoea nil]) HSP 1 Score: 110.5 bits (275), Expect = 1.6e-20 Identity = 66/146 (45.21%), Postives = 94/146 (64.38%), Query Frame = 0
BLAST of Lcy03g004160 vs. NCBI nr
Match: XP_019197814.1 (PREDICTED: uncharacterized protein LOC109191648 [Ipomoea nil]) HSP 1 Score: 110.2 bits (274), Expect = 2.1e-20 Identity = 65/146 (44.52%), Postives = 94/146 (64.38%), Query Frame = 0
BLAST of Lcy03g004160 vs. NCBI nr
Match: XP_031105706.1 (uncharacterized protein LOC116010433 [Ipomoea triloba]) HSP 1 Score: 109.8 bits (273), Expect = 2.7e-20 Identity = 64/141 (45.39%), Postives = 93/141 (65.96%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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