Lcy03g003800 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g003800
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Secretion protein HlyD family protein
Location	Chr03: 17534289 .. 17536557 (-)
RNA-Seq Expression	Lcy03g003800
Synteny	Lcy03g003800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAAGCTTTCCTGGGCCTAGGGAGATCCTCTTTCGTGGGTTAAGCAGTCGCTGGGCTTCGACGCCTGGTCGGCCTCGGCCTAGGGCCGAGGCCGAGGGGGGTGTTGGGCCACGTTTATTGGGATGTGCCTCCCTCCTCTTTCGCCGGTCGGCTTGGGATGGGTTCGACTTTTCTTTCTTCTAGAATTCTGGTTACGCCAAAATTACCCATAACATTAAGCCCCCACTCTCTGATTGGGGTTTGGTGCCATGCTACTTGCTTCAATTAGATTAATCTGCAAACCCAATTAGAGAGAATAATGCTCAGCTTTAGTAATTTGGTTTCCTTGGATTTTACTTTTGTAGAATATCACAAGCTTTAGTTTACATTTTTCCAAATTATTTTTTCATCATTGTTTTTTATTATTATTATTTTTATTTTATAAGTTTTATTCTTGACATTGTTTTTTATTATTATTTTTTTTATTTTATAAGTTTTATTCTTGACATTATGTGCGTGTGTGGGAATTTTATAAGTTTTATTTTTTCCAAATTATAAGTTTTTTATTATTATTCTTGACAATAGGTGAAATCAATTCCCTAAGAGTCTTTCTTGATATTCTTGACATCACCGCCCCTTCCATAAGCCTGGCGAACAAGTGATGCGCAATTTGCTTACTGCAAGTGTACGGGTCAAGTAATAATAAGCCTGGAGAACAAGTGATGCACAATTTTCGGGATTGGTTTTCTAGCAAATTAAGTACCATGAATAATCTTGTCCAATTTTATTTAGGAAGTAAAACTTAATGATATAGATAAATTTAAAGACAAAAAATCATAAAATAAAGGTGGAGTCTCAAATGGAAAGACTCTTAGGGAATTGATTTCACCTATTGGAGTTGTGGATTAATCGCTAGAATATGTGAACATGTAAAGATTCATCAATCTAGGATAAACTATTATATCATAGCTATCTCTCCCGAGCATAACTAATTCTCATACATGTAATAAACTCAATATCCCTATCTAAGTTCATTAACATGCAAGGCCTTAAGTCTAATCCTTTAACGATTTCTAAGACTATCTCTCATCTCCTGATCTCAAGATTATCTTAGTTATGCACAACATGATCTAAACTAAATCCCCTCTCCCGAGCAAGACTTAGAGAAAACATTATTCAATTCATGGCCAATGAATCAAAAGCATTAAGAGTAGAATATGCATAAATGAATTCAAAGCAATACATAAGCAAGAAATAATCCATCAACGCCCAAAGGGCTACATCAATTCCTAAGACAATCAAGCTAGCTACTCATAGTCAAAGAACTACAAATAAAACTTGAAAGAAAACCCATAAAAACAACAAGAGGTAAGGGAAAGAAAAGGAAAACTCTTGAATCCGTAGAAACCGACACGTCCCCGTCACGATCTCCACGTCTTCAAGCTTGGTTCCCACTCCTTGGCTTTGCTTCAGCTCCCACAGAAGGTCTCTAGTCGAAATTGTGGCTAAAATCTAACCAAATGGACTCCCCCAATCCGTAGCACAAAAGATTGTATATATAGGAAAATTGTCAGTAGCGTCGCGACGCTGTCCCTGCCATCGCCAAAAATAGAAAAGGAAAACCAGCGTCAAGACGCCCAGAAAGCAGCGTCGAGATGCTAGCTCTCGGGTTTGCCTTAAACTTAAGCCTCCAACTTTGATTCTAGTCCATTTCTTTGGCCTCTTTTCGTGCCCCGAACACTCGATTAACTCCATTTTCTTGATTTAGCTCCAATAATTGATTCCTACAAATAGAACATTAAAATGCATAAATTTGGCCAATTTATTTCAAAGACTAACTAAAATAGATAGGGAAAATAGTTTGTTATGCTCGCTATCAACACAAGATCAATGAGCTCCAACTGAACAACGTTCCTAGAAGCGAGCTCACACAGGTTCAGGAGAAACTTGATCAAGCCAACCGCCTGTTGGACGAAGGTCGGGCAAAACTCAACTCCAAGGAAGCTGAGTTGGAAACCACCAAAGCCCAGCTAAAGGAGGCTAAGGCTCACTTGGCCGATGCCAACTACCTGGGTGAAGAGTTTAGGAAGACTAATGAGTTTTATGCCATGCAAGATGAAATATGGAACGATGGTATTAAATGGGTTGTCAAAAGATTCGGCAAGCGCCATCCAACTGTGGATGGCTCATTCATCCAAGAAGACCTCACCACCCTTGCGACCAAACCCGATGCCTTCGCTTCATTTGACGAGTCTTCAGGCGGTAGGGATCATATGGATCTCTGA

mRNA sequence

ATGGATCAAGCTTTCCTGGGCCTAGGGAGATCCTCTTTCGTTCAGGAGAAACTTGATCAAGCCAACCGCCTGTTGGACGAAGGTCGGGCAAAACTCAACTCCAAGGAAGCTGAGTTGGAAACCACCAAAGCCCAGCTAAAGGAGGCTAAGGCTCACTTGGCCGATGCCAACTACCTGGGTGAAGAGTTTAGGAAGACTAATGAGTTTTATGCCATGCAAGATGAAATATGGAACGATGGTATTAAATGGGTTGTCAAAAGATTCGGCAAGCGCCATCCAACTGTGGATGGCTCATTCATCCAAGAAGACCTCACCACCCTTGCGACCAAACCCGATGCCTTCGCTTCATTTGACGAGTCTTCAGGCGGTAGGGATCATATGGATCTCTGA

Coding sequence (CDS)

ATGGATCAAGCTTTCCTGGGCCTAGGGAGATCCTCTTTCGTTCAGGAGAAACTTGATCAAGCCAACCGCCTGTTGGACGAAGGTCGGGCAAAACTCAACTCCAAGGAAGCTGAGTTGGAAACCACCAAAGCCCAGCTAAAGGAGGCTAAGGCTCACTTGGCCGATGCCAACTACCTGGGTGAAGAGTTTAGGAAGACTAATGAGTTTTATGCCATGCAAGATGAAATATGGAACGATGGTATTAAATGGGTTGTCAAAAGATTCGGCAAGCGCCATCCAACTGTGGATGGCTCATTCATCCAAGAAGACCTCACCACCCTTGCGACCAAACCCGATGCCTTCGCTTCATTTGACGAGTCTTCAGGCGGTAGGGATCATATGGATCTCTGA

Protein sequence

MDQAFLGLGRSSFVQEKLDQANRLLDEGRAKLNSKEAELETTKAQLKEAKAHLADANYLGEEFRKTNEFYAMQDEIWNDGIKWVVKRFGKRHPTVDGSFIQEDLTTLATKPDAFASFDESSGGRDHMDL

Homology

[Close]

BLAST of Lcy03g003800 vs. ExPASy TrEMBL
Match: A0A5A7SSF9 (Secretion protein HlyD family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43059G00750 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 7.7e-09
Identity = 37/90 (41.11%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 15  QEKLDQANRLLDEGRAKLN----SKEAELETTKAQLKEAKAHLADANYLGEEFRKTNEFY 74
           +E+L +ANR L+E + +L     S + +++  KAQL EAK+ L+DA  L E+F KT EF 
Sbjct: 234 REELMRANRRLEEAKVELGLCQASSQVKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFV 293

Query: 75  AMQDEIWNDGIKWVVKRFGKRHPTVDGSFI 101
            MQ++I   G+ W V++    HP +D SF+
Sbjct: 294 VMQNKIMECGVNWSVRQASIEHPGIDFSFL 323

[Close]

BLAST of Lcy03g003800 vs. ExPASy TrEMBL
Match: A0A5D3BQ22 (Secretion protein HlyD family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00610 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 7.7e-09
Identity = 37/90 (41.11%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 15  QEKLDQANRLLDEGRAKLN----SKEAELETTKAQLKEAKAHLADANYLGEEFRKTNEFY 74
           +E+L +ANR L+E + +L     S + +++  KAQL EAK+ L+DA  L E+F KT EF 
Sbjct: 183 REELMRANRRLEEAKVELGLCQASSQVKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFV 242

Query: 75  AMQDEIWNDGIKWVVKRFGKRHPTVDGSFI 101
            MQ++I   G+ W V++    HP +D SF+
Sbjct: 243 VMQNKIMECGVNWSVRQASIEHPGIDFSFL 272

[Close]

BLAST of Lcy03g003800 vs. ExPASy TrEMBL
Match: A0A0A0LXX2 (Secretion protein HlyD family protein OS=Cucumis sativus OX=3659 GN=Csa_1G495250 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 7.7e-09
Identity = 37/90 (41.11%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 15  QEKLDQANRLLDEGRAKLN----SKEAELETTKAQLKEAKAHLADANYLGEEFRKTNEFY 74
           +E+L +ANR L+E + +L     S + +++  KAQL EAK+ L+DA  L E+F KT EF 
Sbjct: 15  REELMRANRRLEEAKVELGLCQASSQVKIDKLKAQLTEAKSELSDAKCLAEKFSKTEEFV 74

Query: 75  AMQDEIWNDGIKWVVKRFGKRHPTVDGSFI 101
            MQ++I   G+ W V++    HP +D SF+
Sbjct: 75  VMQNKIMECGVNWSVRQASIEHPGIDFSFL 104

[Close]

BLAST of Lcy03g003800 vs. ExPASy TrEMBL
Match: A0A1S3C5B2 (uncharacterized protein LOC103497199 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497199 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 7.7e-09
Identity = 37/90 (41.11%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 15  QEKLDQANRLLDEGRAKLN----SKEAELETTKAQLKEAKAHLADANYLGEEFRKTNEFY 74
           +E+L +ANR L+E + +L     S + +++  KAQL EAK+ L+DA  L E+F KT EF 
Sbjct: 244 REELMRANRRLEEAKVELGLCQASSQVKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFV 303

Query: 75  AMQDEIWNDGIKWVVKRFGKRHPTVDGSFI 101
            MQ++I   G+ W V++    HP +D SF+
Sbjct: 304 VMQNKIMECGVNWSVRQASIEHPGIDFSFL 333

[Close]

BLAST of Lcy03g003800 vs. ExPASy TrEMBL
Match: A0A1S4E2A9 (uncharacterized protein LOC103497199 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497199 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 7.7e-09
Identity = 37/90 (41.11%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 15  QEKLDQANRLLDEGRAKLN----SKEAELETTKAQLKEAKAHLADANYLGEEFRKTNEFY 74
           +E+L +ANR L+E + +L     S + +++  KAQL EAK+ L+DA  L E+F KT EF 
Sbjct: 199 REELMRANRRLEEAKVELGLCQASSQVKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFV 258

Query: 75  AMQDEIWNDGIKWVVKRFGKRHPTVDGSFI 101
            MQ++I   G+ W V++    HP +D SF+
Sbjct: 259 VMQNKIMECGVNWSVRQASIEHPGIDFSFL 288

[Close]

BLAST of Lcy03g003800 vs. NCBI nr
Match: TYK01274.1 (Secretion protein HlyD family protein [Cucumis melo var. makuwa])

HSP 1 Score: 70.1 bits (170), Expect = 1.6e-08
Identity = 37/90 (41.11%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 15  QEKLDQANRLLDEGRAKLN----SKEAELETTKAQLKEAKAHLADANYLGEEFRKTNEFY 74
           +E+L +ANR L+E + +L     S + +++  KAQL EAK+ L+DA  L E+F KT EF 
Sbjct: 183 REELMRANRRLEEAKVELGLCQASSQVKIDKLKAQLAEAKSQLSDAKCLAEKFSKTEEFV 242

Query: 75  AMQDEIWNDGIKWVVKRFGKRHPTVDGSFI 101
            MQ++I   G+ W V++    HP +D SF+
Sbjct: 243 VMQNKIMECGVNWSVRQASIEHPGIDFSFL 272

[Close]

BLAST of Lcy03g003800 vs. NCBI nr
Match: XP_031737089.1 (uncharacterized protein LOC105435920 isoform X5 [Cucumis sativus])

HSP 1 Score: 70.1 bits (170), Expect = 1.6e-08
Identity = 37/90 (41.11%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 15  QEKLDQANRLLDEGRAKLN----SKEAELETTKAQLKEAKAHLADANYLGEEFRKTNEFY 74
           +E+L +ANR L+E + +L     S + +++  KAQL EAK+ L+DA  L E+F KT EF 
Sbjct: 222 REELMRANRRLEEAKVELGLCQASSQVKIDKLKAQLTEAKSELSDAKCLAEKFSKTEEFV 281

Query: 75  AMQDEIWNDGIKWVVKRFGKRHPTVDGSFI 101
            MQ++I   G+ W V++    HP +D SF+
Sbjct: 282 VMQNKIMECGVNWSVRQASIEHPGIDFSFL 311

[Close]

BLAST of Lcy03g003800 vs. NCBI nr
Match: XP_031737075.1 (uncharacterized protein LOC105435920 isoform X1 [Cucumis sativus])

HSP 1 Score: 70.1 bits (170), Expect = 1.6e-08
Identity = 37/90 (41.11%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 15  QEKLDQANRLLDEGRAKLN----SKEAELETTKAQLKEAKAHLADANYLGEEFRKTNEFY 74
           +E+L +ANR L+E + +L     S + +++  KAQL EAK+ L+DA  L E+F KT EF 
Sbjct: 253 REELMRANRRLEEAKVELGLCQASSQVKIDKLKAQLTEAKSELSDAKCLAEKFSKTEEFV 312

Query: 75  AMQDEIWNDGIKWVVKRFGKRHPTVDGSFI 101
            MQ++I   G+ W V++    HP +D SF+
Sbjct: 313 VMQNKIMECGVNWSVRQASIEHPGIDFSFL 342

[Close]

BLAST of Lcy03g003800 vs. NCBI nr
Match: XP_031737083.1 (uncharacterized protein LOC105435920 isoform X3 [Cucumis sativus])

HSP 1 Score: 70.1 bits (170), Expect = 1.6e-08
Identity = 37/90 (41.11%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 15  QEKLDQANRLLDEGRAKLN----SKEAELETTKAQLKEAKAHLADANYLGEEFRKTNEFY 74
           +E+L +ANR L+E + +L     S + +++  KAQL EAK+ L+DA  L E+F KT EF 
Sbjct: 239 REELMRANRRLEEAKVELGLCQASSQVKIDKLKAQLTEAKSELSDAKCLAEKFSKTEEFV 298

Query: 75  AMQDEIWNDGIKWVVKRFGKRHPTVDGSFI 101
            MQ++I   G+ W V++    HP +D SF+
Sbjct: 299 VMQNKIMECGVNWSVRQASIEHPGIDFSFL 328

[Close]

BLAST of Lcy03g003800 vs. NCBI nr
Match: KGN66039.2 (hypothetical protein Csa_020117 [Cucumis sativus])

HSP 1 Score: 70.1 bits (170), Expect = 1.6e-08
Identity = 37/90 (41.11%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 15  QEKLDQANRLLDEGRAKLN----SKEAELETTKAQLKEAKAHLADANYLGEEFRKTNEFY 74
           +E+L +ANR L+E + +L     S + +++  KAQL EAK+ L+DA  L E+F KT EF 
Sbjct: 238 REELMRANRRLEEAKVELGLCQASSQVKIDKLKAQLTEAKSELSDAKCLAEKFSKTEEFV 297

Query: 75  AMQDEIWNDGIKWVVKRFGKRHPTVDGSFI 101
            MQ++I   G+ W V++    HP +D SF+
Sbjct: 298 VMQNKIMECGVNWSVRQASIEHPGIDFSFL 327

The following BLAST results are available for this feature:

BLAST of Lcy03g003800 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy03g003800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SSF9	7.7e-09	41.11	Secretion protein HlyD family protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3BQ22	7.7e-09	41.11	Secretion protein HlyD family protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0LXX2	7.7e-09	41.11	Secretion protein HlyD family protein OS=Cucumis sativus OX=3659 GN=Csa_1G495250...	[more]
A0A1S3C5B2	7.7e-09	41.11	uncharacterized protein LOC103497199 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4E2A9	7.7e-09	41.11	uncharacterized protein LOC103497199 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Lcy03g003800 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01274.1	1.6e-08	41.11	Secretion protein HlyD family protein [Cucumis melo var. makuwa]	[more]
XP_031737089.1	1.6e-08	41.11	uncharacterized protein LOC105435920 isoform X5 [Cucumis sativus]	[more]
XP_031737075.1	1.6e-08	41.11	uncharacterized protein LOC105435920 isoform X1 [Cucumis sativus]	[more]
XP_031737083.1	1.6e-08	41.11	uncharacterized protein LOC105435920 isoform X3 [Cucumis sativus]	[more]
KGN66039.2	1.6e-08	41.11	hypothetical protein Csa_020117 [Cucumis sativus]	[more]

BLAST of Lcy03g003800 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 18..52

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g003800.1	Lcy03g003800.1	mRNA