Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATTTCTTCAGTAAACGAGGTTATTTGGGATCTGGACAAAAAAGGGCATTACTCCGTCAAGAGTGGTTACCATTTAGCAGTGAATATCAGCTCTAATGAGGAGGCATCGGTTTCAAATGAAGACTACACAACTTCTTTGTGGAAATCGGTTTGGAATCTTAAAATTTTGCCAAGGGCCAAAATCACAATTTGGAAAATCCTAAATGATGTGCTTCCTACTGGATCAAATTTGAGAATCAAAGGTTGCCATTCTAATGCGTGTTGTTTTCTATGCAGAAGAAAAGAGGAGCTTTCCAGCCATTTATTCTGGTTTTGCAAGTTTGCTAAATCAATTTGGCTTAAATTTCTTCCTAACGCCCACCTATTTTTCTCTGTGATCAGGAAGCAATGGAATTCTTTGGAAATCTGGAGATTGCTATCATCTTTCGTTAGCAAGCAGGAGCTGGAGATTGCGGGGATTATCCTTTGGAACATATGGCAAGAGAGGAATGCTTGTTTTCACAAAGGCAGAGAAGCAGATTTAGCTTATGTTGAGAGGAAAATCGTAAAATACCTGGAAGATATGAAAATTGAGCTCTGTTCAAGCTTGTCGCATAGATCGTTGGAGACCCAGGAGAGTCACCCTTCGTGGAGGCCGCCAAGCGAAGGTTGCTGGAAGCTGAATTCGGATGCTTCTTAG
mRNA sequence
ATGGGAATTTCTTCAGTAAACGAGGTTATTTGGGATCTGGACAAAAAAGGGCATTACTCCGTCAAGAGTGGTTACCATTTAGCAGTGAATATCAGCTCTAATGAGGAGGCATCGGTTTCAAATGAAGACTACACAACTTCTTTGTGGAAATCGGTTTGGAATCTTAAAATTTTGCCAAGGGCCAAAATCACAATTTGGAAAATCCTAAATGATGTGCTTCCTACTGGATCAAATTTGAGAATCAAAGGTTGCCATTCTAATGCGTGTTGTTTTCTATGCAGAAGAAAAGAGGAGCTTTCCAGCCATTTATTCTGGTTTTGCAAGTTTGCTAAATCAATTTGGCTTAAATTTCTTCCTAACGCCCACCTATTTTTCTCTGTGATCAGGAAGCAATGGAATTCTTTGGAAATCTGGAGATTGCTATCATCTTTCGTTAGCAAGCAGGAGCTGGAGATTGCGGGGATTATCCTTTGGAACATATGGCAAGAGAGGAATGCTTGTTTTCACAAAGGCAGAGAAGCAGATTTAGCTTATGTTGAGAGGAAAATCGTAAAATACCTGGAAGATATGAAAATTGAGCTCTGTTCAAGCTTGTCGCATAGATCGTTGGAGACCCAGGAGAGTCACCCTTCGTGGAGGCCGCCAAGCGAAGGTTGCTGGAAGCTGAATTCGGATGCTTCTTAG
Coding sequence (CDS)
ATGGGAATTTCTTCAGTAAACGAGGTTATTTGGGATCTGGACAAAAAAGGGCATTACTCCGTCAAGAGTGGTTACCATTTAGCAGTGAATATCAGCTCTAATGAGGAGGCATCGGTTTCAAATGAAGACTACACAACTTCTTTGTGGAAATCGGTTTGGAATCTTAAAATTTTGCCAAGGGCCAAAATCACAATTTGGAAAATCCTAAATGATGTGCTTCCTACTGGATCAAATTTGAGAATCAAAGGTTGCCATTCTAATGCGTGTTGTTTTCTATGCAGAAGAAAAGAGGAGCTTTCCAGCCATTTATTCTGGTTTTGCAAGTTTGCTAAATCAATTTGGCTTAAATTTCTTCCTAACGCCCACCTATTTTTCTCTGTGATCAGGAAGCAATGGAATTCTTTGGAAATCTGGAGATTGCTATCATCTTTCGTTAGCAAGCAGGAGCTGGAGATTGCGGGGATTATCCTTTGGAACATATGGCAAGAGAGGAATGCTTGTTTTCACAAAGGCAGAGAAGCAGATTTAGCTTATGTTGAGAGGAAAATCGTAAAATACCTGGAAGATATGAAAATTGAGCTCTGTTCAAGCTTGTCGCATAGATCGTTGGAGACCCAGGAGAGTCACCCTTCGTGGAGGCCGCCAAGCGAAGGTTGCTGGAAGCTGAATTCGGATGCTTCTTAG
Protein sequence
MGISSVNEVIWDLDKKGHYSVKSGYHLAVNISSNEEASVSNEDYTTSLWKSVWNLKILPRAKITIWKILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIWLKFLPNAHLFFSVIRKQWNSLEIWRLLSSFVSKQELEIAGIILWNIWQERNACFHKGREADLAYVERKIVKYLEDMKIELCSSLSHRSLETQESHPSWRPPSEGCWKLNSDAS
Homology
BLAST of Lcy03g003750 vs. ExPASy TrEMBL
Match:
A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)
HSP 1 Score: 125.2 bits (313), Expect = 3.6e-25
Identity = 68/224 (30.36%), Postives = 113/224 (50.45%), Query Frame = 0
Query: 7 NEVIWDLDKKGHYSVKSGYHLA-VNISSNEEASVSNEDYTTSLWKSVWNLKILPRAKITI 66
+ +IW+ +K G YSV+SGY +A +N + S S+ + W W + I + K+ +
Sbjct: 793 DRLIWNYEKTGVYSVRSGYKVALLNNPCVQAPSSSSSEEVRCWWNGFWKMHIPNKIKVFL 852
Query: 67 WKILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIWLKFLPNAHLFF 126
W++ D LPTG NL +G CC+ C R E S HLFW CKFA+++W+ F
Sbjct: 853 WRLCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALWINSKFGKLSPF 912
Query: 127 SVIRKQWNSLEIWRLLSSFVSKQELEIAGIILWNIWQERNACFHKGREADLAYVERKIVK 186
++R+ SL SK + E +++W +W +RNA + + ++V+
Sbjct: 913 LILRESHESL----------SKADFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELVE 972
Query: 187 YLEDMKIELCSSLSH--RSLETQESHPSWRPPSEGCWKLNSDAS 228
+ +E + S+ T + W+PP EG +K+N+DAS
Sbjct: 973 WANKYAMEFREAKSNPITGRVTNTAEILWQPPDEGIYKINTDAS 1006
BLAST of Lcy03g003750 vs. ExPASy TrEMBL
Match:
A0A803QH76 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 122.5 bits (306), Expect = 2.3e-24
Identity = 74/233 (31.76%), Postives = 119/233 (51.07%), Query Frame = 0
Query: 7 NEVIWDLDKKGHYSVKSGYHLAVNISSNEEASVSNEDYTTSLWKSVWNLKILPRAKITIW 66
++++W G Y+V+SGYHLAV++ S ++ S S+ + W +W+L++ + KI W
Sbjct: 1333 DKIMWHHSDSGCYTVQSGYHLAVSLDSRDDHSSSSTN--RKWWNRLWSLQLPKKVKIFAW 1392
Query: 67 KILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIWLKFLPNAHLFFS 126
+++ND LPT NL + S+A C LC+ E H + C AK +W KF + ++F
Sbjct: 1393 RLVNDALPTAVNLAHRKIASSAACALCKCSWESVGHALFRCHRAKLVWDKF--HFNVFIP 1452
Query: 127 VIRKQWNSLEIWRLLSSFVSKQELEIAGIILWNIWQERNACFHKGREADLAYVERKIVKY 186
I +I+ L++ + +LEI +LW IW ERN H + + Y
Sbjct: 1453 NI-ANIKGFDIYSHLAAAHNDNDLEIITCLLWCIWSERNKEIHGTKPKPAPILCSFAANY 1512
Query: 187 LEDMKI-----ELCSSLSHRSLET-------QESHPSWRPPSEGCWKLNSDAS 228
L K+ + S LS S +++ P W+PP EGC+KLN DA+
Sbjct: 1513 LTQYKMAATQQKCASGLSSTSCNASVPVDAPEKTRPQWKPPDEGCYKLNVDAA 1560
BLAST of Lcy03g003750 vs. ExPASy TrEMBL
Match:
A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)
HSP 1 Score: 122.1 bits (305), Expect = 3.0e-24
Identity = 73/236 (30.93%), Postives = 122/236 (51.69%), Query Frame = 0
Query: 1 MGISSVN---EVIWDLDKKGHYSVKSGYHLAVNISSNEEASVSNEDYTTSLWKSVWNLKI 60
M ISS N +W DK+G+YSV+SGY L +++ N A+ ++ +Y + W S+W L +
Sbjct: 1083 MPISSYNLQDSWLWHYDKRGNYSVRSGYKLYMHLKCN--ATSASTNYRGTQWNSIWKLTV 1142
Query: 61 LPRAKITIWKILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIWLKF 120
+ KI IW+ ++ +PT NL ++G C +C + E H F+ CK A+ IW
Sbjct: 1143 PTKIKIFIWRSAHEHIPTAQNLLLRGIGELPACTICGDRRESIIHAFFHCKRARQIWRTL 1202
Query: 121 LPNAHLFFSVIRKQWN--SLEIWRLLSSFVSKQELEIAGIILWNIWQERNACFHKGREAD 180
P F + + + N LE+W L+ + ++L +A I W IW +RN+ H + +
Sbjct: 1203 FP----FLTCLSAEDNISFLELWSSLTEQLEPKDLNLAAITGWGIWNDRNSLIHGKQVSP 1262
Query: 181 LAYVERKIVKYLEDMKIELCSSLSHRSLETQESH----PSWRPPSEGCWKLNSDAS 228
+ + + +L+ + +S+ S TQ +H WRP S KLN+DA+
Sbjct: 1263 VEFKCEWLTPFLDS---HSQAQMSNYSPRTQSNHRPVVQYWRPSSSVSLKLNTDAA 1309
BLAST of Lcy03g003750 vs. ExPASy TrEMBL
Match:
A0A803P4T9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 115.5 bits (288), Expect = 2.8e-22
Identity = 73/231 (31.60%), Postives = 116/231 (50.22%), Query Frame = 0
Query: 7 NEVIWDLDKKGHYSVKSGYHLAVNISSNEEASVSNEDYTTSLWKSVWNLKILPRAKITIW 66
+ +IW G Y+V+SG+HLA ++ E+ + S D + WK WNL + P+ +I +W
Sbjct: 258 DRLIWHYTSNGSYTVQSGFHLANSL--EEQLNSSTSDNQSIWWKFFWNLTLPPKIRIFVW 317
Query: 67 KILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIWLKFLPNAHLFFS 126
K+L+++LPT + L K ++A C LC E H + CK AK+IW L FS
Sbjct: 318 KVLHNILPTAAALFKKKVLTSAECSLCASSWESIGHALFGCKHAKAIWRS--SKFQLDFS 377
Query: 127 VIRKQWNSLEIWRLLSSFVSKQELEIAGIILWNIWQERNACFHKGREADLAYVERKIVKY 186
+ +N + LS+ +S+ + E+ ILW IW +RN H G + V++
Sbjct: 378 RAQNMFNG-DYLLNLSTVLSQPDFELMLCILWGIWTDRNKVVHGGTPRQPTAIVNYAVRF 437
Query: 187 LEDM-KIELCS----SLSHR-----SLETQESHPSWRPPSEGCWKLNSDAS 228
LED + CS ++S S T + W+PP +K+N DA+
Sbjct: 438 LEDFTRARKCSPPAAAISSEFPATSSTATVQQAAKWQPPQLNGFKMNVDAA 483
BLAST of Lcy03g003750 vs. ExPASy TrEMBL
Match:
A0A6P9E5W8 (uncharacterized protein LOC108982175 OS=Juglans regia OX=51240 GN=LOC108982175 PE=4 SV=1)
HSP 1 Score: 115.5 bits (288), Expect = 2.8e-22
Identity = 67/230 (29.13%), Postives = 111/230 (48.26%), Query Frame = 0
Query: 7 NEVIWDLDKKGHYSVKSGYHLAVNISSNEEASVSNEDYTTSLWKSVWNLKILPRAKITIW 66
++++W G Y+VKSGYHL+ + +E S ++ WK++W L++ P K+ +W
Sbjct: 884 DKLVWQFTTNGLYTVKSGYHLSKVLECAQEGETSGKEKEKQAWKTIWKLRVTPATKMFLW 943
Query: 67 KILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIW---LKFLPNAHL 126
+ N+ LPT +NLR + ++ C C+++ E S H+ W C AK +W +K + +
Sbjct: 944 RACNEALPTLANLRRRKVVEHSSCLTCKQEAETSGHVLWGCIAAKDVWGQGVKKVQKLSV 1003
Query: 127 FFSVIRKQWNSLEIWRLLSSFVSKQELEIAGIILWNIWQERNACF------HKGREADLA 186
+I +IW L +S +ELE + IW RN H LA
Sbjct: 1004 QSDLI------FDIWSRLVEILSLEELEEVAATMRGIWTRRNNTLLGKEFKHPNALHQLA 1063
Query: 187 YVERKIVKYLEDMKIELCSSLSHRSLETQESHPSWRPPSEGCWKLNSDAS 228
E +V Y E + ++ + L+ T P W P EG +K+N DA+
Sbjct: 1064 KTE--LVLYREALAEDIGAKLT-----TNAGFPRWSKPEEGLFKVNWDAA 1100
BLAST of Lcy03g003750 vs. NCBI nr
Match:
XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])
HSP 1 Score: 125.2 bits (313), Expect = 7.3e-25
Identity = 68/224 (30.36%), Postives = 113/224 (50.45%), Query Frame = 0
Query: 7 NEVIWDLDKKGHYSVKSGYHLA-VNISSNEEASVSNEDYTTSLWKSVWNLKILPRAKITI 66
+ +IW+ +K G YSV+SGY +A +N + S S+ + W W + I + K+ +
Sbjct: 793 DRLIWNYEKTGVYSVRSGYKVALLNNPCVQAPSSSSSEEVRCWWNGFWKMHIPNKIKVFL 852
Query: 67 WKILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIWLKFLPNAHLFF 126
W++ D LPTG NL +G CC+ C R E S HLFW CKFA+++W+ F
Sbjct: 853 WRLCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALWINSKFGKLSPF 912
Query: 127 SVIRKQWNSLEIWRLLSSFVSKQELEIAGIILWNIWQERNACFHKGREADLAYVERKIVK 186
++R+ SL SK + E +++W +W +RNA + + ++V+
Sbjct: 913 LILRESHESL----------SKADFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELVE 972
Query: 187 YLEDMKIELCSSLSH--RSLETQESHPSWRPPSEGCWKLNSDAS 228
+ +E + S+ T + W+PP EG +K+N+DAS
Sbjct: 973 WANKYAMEFREAKSNPITGRVTNTAEILWQPPDEGIYKINTDAS 1006
BLAST of Lcy03g003750 vs. NCBI nr
Match:
XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])
HSP 1 Score: 122.1 bits (305), Expect = 6.2e-24
Identity = 73/236 (30.93%), Postives = 122/236 (51.69%), Query Frame = 0
Query: 1 MGISSVN---EVIWDLDKKGHYSVKSGYHLAVNISSNEEASVSNEDYTTSLWKSVWNLKI 60
M ISS N +W DK+G+YSV+SGY L +++ N A+ ++ +Y + W S+W L +
Sbjct: 1083 MPISSYNLQDSWLWHYDKRGNYSVRSGYKLYMHLKCN--ATSASTNYRGTQWNSIWKLTV 1142
Query: 61 LPRAKITIWKILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIWLKF 120
+ KI IW+ ++ +PT NL ++G C +C + E H F+ CK A+ IW
Sbjct: 1143 PTKIKIFIWRSAHEHIPTAQNLLLRGIGELPACTICGDRRESIIHAFFHCKRARQIWRTL 1202
Query: 121 LPNAHLFFSVIRKQWN--SLEIWRLLSSFVSKQELEIAGIILWNIWQERNACFHKGREAD 180
P F + + + N LE+W L+ + ++L +A I W IW +RN+ H + +
Sbjct: 1203 FP----FLTCLSAEDNISFLELWSSLTEQLEPKDLNLAAITGWGIWNDRNSLIHGKQVSP 1262
Query: 181 LAYVERKIVKYLEDMKIELCSSLSHRSLETQESH----PSWRPPSEGCWKLNSDAS 228
+ + + +L+ + +S+ S TQ +H WRP S KLN+DA+
Sbjct: 1263 VEFKCEWLTPFLDS---HSQAQMSNYSPRTQSNHRPVVQYWRPSSSVSLKLNTDAA 1309
BLAST of Lcy03g003750 vs. NCBI nr
Match:
XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis])
HSP 1 Score: 117.1 bits (292), Expect = 2.0e-22
Identity = 71/224 (31.70%), Postives = 109/224 (48.66%), Query Frame = 0
Query: 7 NEVIWDLDKKGHYSVKSGYHLAVNISSNEEASVSNEDYTTSLWKSVWNLKILPRAKITIW 66
+EV+W DK+G+YSVKSGY LA + S S S + + W ++W L++ + KI +W
Sbjct: 1034 DEVLWHYDKRGNYSVKSGYQLA--LRSKFPDSTSCTEASHKYWSALWTLELPEKLKIFMW 1093
Query: 67 KILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIWLKFLPNAHLFFS 126
+ N++LP+ NL + C C+ E SH CK A+ IWL+ FS
Sbjct: 1094 RASNNLLPSAENLWKRKVVEEPTCKRCKLSVETISHALLECKAARKIWLQSP------FS 1153
Query: 127 VIRKQWNSLEIWRLLSSF---VSKQELEIAGIILWNIWQERNACFHKGREADLAYVERKI 186
R + NS +I+ L + + K +LE+ + W+ W RN C GRE + K
Sbjct: 1154 APRLEANSQDIFSTLQNMAKELRKSDLELMVALCWSAWYARNKCIFDGRELNPIISAAKA 1213
Query: 187 VKYLEDMKIELCSSLSHRSLETQESHPSWRPPSEGCWKLNSDAS 228
L + SH S+ +E W PP + +K+N DA+
Sbjct: 1214 ESVLTAFQRVRKPQQSHISISIKEKQQEWLPPPQNVFKVNVDAA 1249
BLAST of Lcy03g003750 vs. NCBI nr
Match:
XP_035539633.1 (uncharacterized protein LOC108982175 [Juglans regia])
HSP 1 Score: 115.5 bits (288), Expect = 5.8e-22
Identity = 67/230 (29.13%), Postives = 111/230 (48.26%), Query Frame = 0
Query: 7 NEVIWDLDKKGHYSVKSGYHLAVNISSNEEASVSNEDYTTSLWKSVWNLKILPRAKITIW 66
++++W G Y+VKSGYHL+ + +E S ++ WK++W L++ P K+ +W
Sbjct: 884 DKLVWQFTTNGLYTVKSGYHLSKVLECAQEGETSGKEKEKQAWKTIWKLRVTPATKMFLW 943
Query: 67 KILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIW---LKFLPNAHL 126
+ N+ LPT +NLR + ++ C C+++ E S H+ W C AK +W +K + +
Sbjct: 944 RACNEALPTLANLRRRKVVEHSSCLTCKQEAETSGHVLWGCIAAKDVWGQGVKKVQKLSV 1003
Query: 127 FFSVIRKQWNSLEIWRLLSSFVSKQELEIAGIILWNIWQERNACF------HKGREADLA 186
+I +IW L +S +ELE + IW RN H LA
Sbjct: 1004 QSDLI------FDIWSRLVEILSLEELEEVAATMRGIWTRRNNTLLGKEFKHPNALHQLA 1063
Query: 187 YVERKIVKYLEDMKIELCSSLSHRSLETQESHPSWRPPSEGCWKLNSDAS 228
E +V Y E + ++ + L+ T P W P EG +K+N DA+
Sbjct: 1064 KTE--LVLYREALAEDIGAKLT-----TNAGFPRWSKPEEGLFKVNWDAA 1100
BLAST of Lcy03g003750 vs. NCBI nr
Match:
XP_006491472.1 (uncharacterized protein LOC102626455 [Citrus sinensis])
HSP 1 Score: 115.2 bits (287), Expect = 7.6e-22
Identity = 74/228 (32.46%), Postives = 109/228 (47.81%), Query Frame = 0
Query: 7 NEVIWDLDKKGHYSVKSGYHLAVNISSNEEASVSNEDYTTSLWKSVWNLKILPRAKITIW 66
+EV+W DKKG YSVKSGY LA+N + E SN ++ LWK W L + + KI +W
Sbjct: 1093 DEVLWHFDKKGEYSVKSGYQLALNQNFPNEPESSNS--SSRLWKIPWMLDLPEKVKIFMW 1152
Query: 67 KILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIW----LKFLPNA- 126
+ L ++LPT NL + C C+ + E SH+ CK A+ IW L P+
Sbjct: 1153 RALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQPSKD 1212
Query: 127 --HLFFSVIRKQWNSLEIWRLLSSFVSKQELEIAGIILWNIWQERNACFHKGREADLAYV 186
FFS I++ W S S E E+ + W IW RN +G+++D ++
Sbjct: 1213 HNQDFFSAIQEMW----------SRSSTAEAELMIVYCWVIWSARNKFIFEGKKSDSRFL 1272
Query: 187 ERKIVKYLEDMKIELCSSLSHRSLETQESHPSWRPPSEGCWKLNSDAS 228
K L+ + H + + W+PPS+ KLN DA+
Sbjct: 1273 AAKADSVLKAYQRVSKPGNVHGAKDRGIDQQKWKPPSQNVLKLNVDAA 1308
BLAST of Lcy03g003750 vs. TAIR 10
Match:
AT3G09510.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 79.7 bits (195), Expect = 3.3e-15
Identity = 60/234 (25.64%), Postives = 109/234 (46.58%), Query Frame = 0
Query: 7 NEVIWDLDKKGHYSVKSGYHLAVNISSNEEASVSNEDYTTSLWKSVWNLKILPRAKITIW 66
+++IW+ + G Y+V+SGY L + S +++ + L +WNL I+P+ K +W
Sbjct: 117 DKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLW 176
Query: 67 KILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIWLKFLPNAHLFFS 126
+ L+ L T L +G + C C R+ E +H + C FA W L ++ S
Sbjct: 177 RALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWR--LSDS----S 236
Query: 127 VIRKQWNSLEIWRLLSSFVS-KQELEIAGI-------ILWNIWQER-NACFHKGREADLA 186
+IR Q S + +S+ ++ Q+ ++ ++W IW+ R N F+K RE+
Sbjct: 237 LIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRESP-- 296
Query: 187 YVERKIVKYLEDMKIELCSSLSHR-----SLETQESHPSWRPPSEGCWKLNSDA 227
+ ++ + L ++ SH+ + + E+ WR P K N DA
Sbjct: 297 --SKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFDA 340
BLAST of Lcy03g003750 vs. TAIR 10
Match:
AT3G25270.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 69.3 bits (168), Expect = 4.5e-12
Identity = 37/118 (31.36%), Postives = 68/118 (57.63%), Query Frame = 0
Query: 52 VWNLKILPRAKITIWKILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAK 111
+W LK P+ K +WK+L+ L TG NL+ + ++ C C +++E S HLF+ C +A+
Sbjct: 18 IWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQ 77
Query: 112 SIW-LKFLPNAHLFFSVIRKQWNSLEIWRLLSSFVSKQELEIAGI---ILWNIWQERN 166
+W +P+ L + I + +E+ LLSS ++ ++ ++ + ILW +W+ RN
Sbjct: 78 QVWRASGIPHQELRTTGITME-TKMEL--LLSSCLANRQPQLFNLAIWILWRLWKSRN 132
BLAST of Lcy03g003750 vs. TAIR 10
Match:
AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 50.1 bits (118), Expect = 2.8e-06
Identity = 23/60 (38.33%), Postives = 35/60 (58.33%), Query Frame = 0
Query: 52 VWNLKILPRAKITIWKILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAK 111
+W+LKI P+ K+ IWK LN+ LP G+ L + C CR E + +H+ + C FA+
Sbjct: 9 IWSLKISPKIKLLIWKALNNALPVGAQLLSRNISIEPFCTRCRDFETI-THILFNCPFAQ 67
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DAR4 | 3.6e-25 | 30.36 | uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A803QH76 | 2.3e-24 | 31.76 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A6J1DX30 | 3.0e-24 | 30.93 | uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A803P4T9 | 2.8e-22 | 31.60 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A6P9E5W8 | 2.8e-22 | 29.13 | uncharacterized protein LOC108982175 OS=Juglans regia OX=51240 GN=LOC108982175 P... | [more] |
Match Name | E-value | Identity | Description | |
AT3G09510.1 | 3.3e-15 | 25.64 | Ribonuclease H-like superfamily protein | [more] |
AT3G25270.1 | 4.5e-12 | 31.36 | Ribonuclease H-like superfamily protein | [more] |
AT3G26855.1 | 2.8e-06 | 38.33 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |