Lcy03g003750 (gene) Sponge gourd (P93075) v1

Overview
NameLcy03g003750
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase
LocationChr03: 17211762 .. 17212445 (+)
RNA-Seq ExpressionLcy03g003750
SyntenyLcy03g003750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATTTCTTCAGTAAACGAGGTTATTTGGGATCTGGACAAAAAAGGGCATTACTCCGTCAAGAGTGGTTACCATTTAGCAGTGAATATCAGCTCTAATGAGGAGGCATCGGTTTCAAATGAAGACTACACAACTTCTTTGTGGAAATCGGTTTGGAATCTTAAAATTTTGCCAAGGGCCAAAATCACAATTTGGAAAATCCTAAATGATGTGCTTCCTACTGGATCAAATTTGAGAATCAAAGGTTGCCATTCTAATGCGTGTTGTTTTCTATGCAGAAGAAAAGAGGAGCTTTCCAGCCATTTATTCTGGTTTTGCAAGTTTGCTAAATCAATTTGGCTTAAATTTCTTCCTAACGCCCACCTATTTTTCTCTGTGATCAGGAAGCAATGGAATTCTTTGGAAATCTGGAGATTGCTATCATCTTTCGTTAGCAAGCAGGAGCTGGAGATTGCGGGGATTATCCTTTGGAACATATGGCAAGAGAGGAATGCTTGTTTTCACAAAGGCAGAGAAGCAGATTTAGCTTATGTTGAGAGGAAAATCGTAAAATACCTGGAAGATATGAAAATTGAGCTCTGTTCAAGCTTGTCGCATAGATCGTTGGAGACCCAGGAGAGTCACCCTTCGTGGAGGCCGCCAAGCGAAGGTTGCTGGAAGCTGAATTCGGATGCTTCTTAG

mRNA sequence

ATGGGAATTTCTTCAGTAAACGAGGTTATTTGGGATCTGGACAAAAAAGGGCATTACTCCGTCAAGAGTGGTTACCATTTAGCAGTGAATATCAGCTCTAATGAGGAGGCATCGGTTTCAAATGAAGACTACACAACTTCTTTGTGGAAATCGGTTTGGAATCTTAAAATTTTGCCAAGGGCCAAAATCACAATTTGGAAAATCCTAAATGATGTGCTTCCTACTGGATCAAATTTGAGAATCAAAGGTTGCCATTCTAATGCGTGTTGTTTTCTATGCAGAAGAAAAGAGGAGCTTTCCAGCCATTTATTCTGGTTTTGCAAGTTTGCTAAATCAATTTGGCTTAAATTTCTTCCTAACGCCCACCTATTTTTCTCTGTGATCAGGAAGCAATGGAATTCTTTGGAAATCTGGAGATTGCTATCATCTTTCGTTAGCAAGCAGGAGCTGGAGATTGCGGGGATTATCCTTTGGAACATATGGCAAGAGAGGAATGCTTGTTTTCACAAAGGCAGAGAAGCAGATTTAGCTTATGTTGAGAGGAAAATCGTAAAATACCTGGAAGATATGAAAATTGAGCTCTGTTCAAGCTTGTCGCATAGATCGTTGGAGACCCAGGAGAGTCACCCTTCGTGGAGGCCGCCAAGCGAAGGTTGCTGGAAGCTGAATTCGGATGCTTCTTAG

Coding sequence (CDS)

ATGGGAATTTCTTCAGTAAACGAGGTTATTTGGGATCTGGACAAAAAAGGGCATTACTCCGTCAAGAGTGGTTACCATTTAGCAGTGAATATCAGCTCTAATGAGGAGGCATCGGTTTCAAATGAAGACTACACAACTTCTTTGTGGAAATCGGTTTGGAATCTTAAAATTTTGCCAAGGGCCAAAATCACAATTTGGAAAATCCTAAATGATGTGCTTCCTACTGGATCAAATTTGAGAATCAAAGGTTGCCATTCTAATGCGTGTTGTTTTCTATGCAGAAGAAAAGAGGAGCTTTCCAGCCATTTATTCTGGTTTTGCAAGTTTGCTAAATCAATTTGGCTTAAATTTCTTCCTAACGCCCACCTATTTTTCTCTGTGATCAGGAAGCAATGGAATTCTTTGGAAATCTGGAGATTGCTATCATCTTTCGTTAGCAAGCAGGAGCTGGAGATTGCGGGGATTATCCTTTGGAACATATGGCAAGAGAGGAATGCTTGTTTTCACAAAGGCAGAGAAGCAGATTTAGCTTATGTTGAGAGGAAAATCGTAAAATACCTGGAAGATATGAAAATTGAGCTCTGTTCAAGCTTGTCGCATAGATCGTTGGAGACCCAGGAGAGTCACCCTTCGTGGAGGCCGCCAAGCGAAGGTTGCTGGAAGCTGAATTCGGATGCTTCTTAG

Protein sequence

MGISSVNEVIWDLDKKGHYSVKSGYHLAVNISSNEEASVSNEDYTTSLWKSVWNLKILPRAKITIWKILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIWLKFLPNAHLFFSVIRKQWNSLEIWRLLSSFVSKQELEIAGIILWNIWQERNACFHKGREADLAYVERKIVKYLEDMKIELCSSLSHRSLETQESHPSWRPPSEGCWKLNSDAS
Homology
BLAST of Lcy03g003750 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 3.6e-25
Identity = 68/224 (30.36%), Postives = 113/224 (50.45%), Query Frame = 0

Query: 7    NEVIWDLDKKGHYSVKSGYHLA-VNISSNEEASVSNEDYTTSLWKSVWNLKILPRAKITI 66
            + +IW+ +K G YSV+SGY +A +N    +  S S+ +     W   W + I  + K+ +
Sbjct: 793  DRLIWNYEKTGVYSVRSGYKVALLNNPCVQAPSSSSSEEVRCWWNGFWKMHIPNKIKVFL 852

Query: 67   WKILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIWLKFLPNAHLFF 126
            W++  D LPTG NL  +G     CC+ C R  E S HLFW CKFA+++W+         F
Sbjct: 853  WRLCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALWINSKFGKLSPF 912

Query: 127  SVIRKQWNSLEIWRLLSSFVSKQELEIAGIILWNIWQERNACFHKGREADLAYVERKIVK 186
             ++R+   SL          SK + E   +++W +W +RNA         +  +  ++V+
Sbjct: 913  LILRESHESL----------SKADFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELVE 972

Query: 187  YLEDMKIELCSSLSH--RSLETQESHPSWRPPSEGCWKLNSDAS 228
            +     +E   + S+      T  +   W+PP EG +K+N+DAS
Sbjct: 973  WANKYAMEFREAKSNPITGRVTNTAEILWQPPDEGIYKINTDAS 1006

BLAST of Lcy03g003750 vs. ExPASy TrEMBL
Match: A0A803QH76 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.3e-24
Identity = 74/233 (31.76%), Postives = 119/233 (51.07%), Query Frame = 0

Query: 7    NEVIWDLDKKGHYSVKSGYHLAVNISSNEEASVSNEDYTTSLWKSVWNLKILPRAKITIW 66
            ++++W     G Y+V+SGYHLAV++ S ++ S S+ +     W  +W+L++  + KI  W
Sbjct: 1333 DKIMWHHSDSGCYTVQSGYHLAVSLDSRDDHSSSSTN--RKWWNRLWSLQLPKKVKIFAW 1392

Query: 67   KILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIWLKFLPNAHLFFS 126
            +++ND LPT  NL  +   S+A C LC+   E   H  + C  AK +W KF  + ++F  
Sbjct: 1393 RLVNDALPTAVNLAHRKIASSAACALCKCSWESVGHALFRCHRAKLVWDKF--HFNVFIP 1452

Query: 127  VIRKQWNSLEIWRLLSSFVSKQELEIAGIILWNIWQERNACFHKGREADLAYVERKIVKY 186
             I       +I+  L++  +  +LEI   +LW IW ERN   H  +      +      Y
Sbjct: 1453 NI-ANIKGFDIYSHLAAAHNDNDLEIITCLLWCIWSERNKEIHGTKPKPAPILCSFAANY 1512

Query: 187  LEDMKI-----ELCSSLSHRSLET-------QESHPSWRPPSEGCWKLNSDAS 228
            L   K+     +  S LS  S          +++ P W+PP EGC+KLN DA+
Sbjct: 1513 LTQYKMAATQQKCASGLSSTSCNASVPVDAPEKTRPQWKPPDEGCYKLNVDAA 1560

BLAST of Lcy03g003750 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.0e-24
Identity = 73/236 (30.93%), Postives = 122/236 (51.69%), Query Frame = 0

Query: 1    MGISSVN---EVIWDLDKKGHYSVKSGYHLAVNISSNEEASVSNEDYTTSLWKSVWNLKI 60
            M ISS N     +W  DK+G+YSV+SGY L +++  N  A+ ++ +Y  + W S+W L +
Sbjct: 1083 MPISSYNLQDSWLWHYDKRGNYSVRSGYKLYMHLKCN--ATSASTNYRGTQWNSIWKLTV 1142

Query: 61   LPRAKITIWKILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIWLKF 120
              + KI IW+  ++ +PT  NL ++G      C +C  + E   H F+ CK A+ IW   
Sbjct: 1143 PTKIKIFIWRSAHEHIPTAQNLLLRGIGELPACTICGDRRESIIHAFFHCKRARQIWRTL 1202

Query: 121  LPNAHLFFSVIRKQWN--SLEIWRLLSSFVSKQELEIAGIILWNIWQERNACFHKGREAD 180
             P    F + +  + N   LE+W  L+  +  ++L +A I  W IW +RN+  H  + + 
Sbjct: 1203 FP----FLTCLSAEDNISFLELWSSLTEQLEPKDLNLAAITGWGIWNDRNSLIHGKQVSP 1262

Query: 181  LAYVERKIVKYLEDMKIELCSSLSHRSLETQESH----PSWRPPSEGCWKLNSDAS 228
            + +    +  +L+       + +S+ S  TQ +H      WRP S    KLN+DA+
Sbjct: 1263 VEFKCEWLTPFLDS---HSQAQMSNYSPRTQSNHRPVVQYWRPSSSVSLKLNTDAA 1309

BLAST of Lcy03g003750 vs. ExPASy TrEMBL
Match: A0A803P4T9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.8e-22
Identity = 73/231 (31.60%), Postives = 116/231 (50.22%), Query Frame = 0

Query: 7   NEVIWDLDKKGHYSVKSGYHLAVNISSNEEASVSNEDYTTSLWKSVWNLKILPRAKITIW 66
           + +IW     G Y+V+SG+HLA ++   E+ + S  D  +  WK  WNL + P+ +I +W
Sbjct: 258 DRLIWHYTSNGSYTVQSGFHLANSL--EEQLNSSTSDNQSIWWKFFWNLTLPPKIRIFVW 317

Query: 67  KILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIWLKFLPNAHLFFS 126
           K+L+++LPT + L  K   ++A C LC    E   H  + CK AK+IW        L FS
Sbjct: 318 KVLHNILPTAAALFKKKVLTSAECSLCASSWESIGHALFGCKHAKAIWRS--SKFQLDFS 377

Query: 127 VIRKQWNSLEIWRLLSSFVSKQELEIAGIILWNIWQERNACFHKGREADLAYVERKIVKY 186
             +  +N  +    LS+ +S+ + E+   ILW IW +RN   H G       +    V++
Sbjct: 378 RAQNMFNG-DYLLNLSTVLSQPDFELMLCILWGIWTDRNKVVHGGTPRQPTAIVNYAVRF 437

Query: 187 LEDM-KIELCS----SLSHR-----SLETQESHPSWRPPSEGCWKLNSDAS 228
           LED  +   CS    ++S       S  T +    W+PP    +K+N DA+
Sbjct: 438 LEDFTRARKCSPPAAAISSEFPATSSTATVQQAAKWQPPQLNGFKMNVDAA 483

BLAST of Lcy03g003750 vs. ExPASy TrEMBL
Match: A0A6P9E5W8 (uncharacterized protein LOC108982175 OS=Juglans regia OX=51240 GN=LOC108982175 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.8e-22
Identity = 67/230 (29.13%), Postives = 111/230 (48.26%), Query Frame = 0

Query: 7    NEVIWDLDKKGHYSVKSGYHLAVNISSNEEASVSNEDYTTSLWKSVWNLKILPRAKITIW 66
            ++++W     G Y+VKSGYHL+  +   +E   S ++     WK++W L++ P  K+ +W
Sbjct: 884  DKLVWQFTTNGLYTVKSGYHLSKVLECAQEGETSGKEKEKQAWKTIWKLRVTPATKMFLW 943

Query: 67   KILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIW---LKFLPNAHL 126
            +  N+ LPT +NLR +    ++ C  C+++ E S H+ W C  AK +W   +K +    +
Sbjct: 944  RACNEALPTLANLRRRKVVEHSSCLTCKQEAETSGHVLWGCIAAKDVWGQGVKKVQKLSV 1003

Query: 127  FFSVIRKQWNSLEIWRLLSSFVSKQELEIAGIILWNIWQERNACF------HKGREADLA 186
               +I       +IW  L   +S +ELE     +  IW  RN         H      LA
Sbjct: 1004 QSDLI------FDIWSRLVEILSLEELEEVAATMRGIWTRRNNTLLGKEFKHPNALHQLA 1063

Query: 187  YVERKIVKYLEDMKIELCSSLSHRSLETQESHPSWRPPSEGCWKLNSDAS 228
              E  +V Y E +  ++ + L+     T    P W  P EG +K+N DA+
Sbjct: 1064 KTE--LVLYREALAEDIGAKLT-----TNAGFPRWSKPEEGLFKVNWDAA 1100

BLAST of Lcy03g003750 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 125.2 bits (313), Expect = 7.3e-25
Identity = 68/224 (30.36%), Postives = 113/224 (50.45%), Query Frame = 0

Query: 7    NEVIWDLDKKGHYSVKSGYHLA-VNISSNEEASVSNEDYTTSLWKSVWNLKILPRAKITI 66
            + +IW+ +K G YSV+SGY +A +N    +  S S+ +     W   W + I  + K+ +
Sbjct: 793  DRLIWNYEKTGVYSVRSGYKVALLNNPCVQAPSSSSSEEVRCWWNGFWKMHIPNKIKVFL 852

Query: 67   WKILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIWLKFLPNAHLFF 126
            W++  D LPTG NL  +G     CC+ C R  E S HLFW CKFA+++W+         F
Sbjct: 853  WRLCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALWINSKFGKLSPF 912

Query: 127  SVIRKQWNSLEIWRLLSSFVSKQELEIAGIILWNIWQERNACFHKGREADLAYVERKIVK 186
             ++R+   SL          SK + E   +++W +W +RNA         +  +  ++V+
Sbjct: 913  LILRESHESL----------SKADFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELVE 972

Query: 187  YLEDMKIELCSSLSH--RSLETQESHPSWRPPSEGCWKLNSDAS 228
            +     +E   + S+      T  +   W+PP EG +K+N+DAS
Sbjct: 973  WANKYAMEFREAKSNPITGRVTNTAEILWQPPDEGIYKINTDAS 1006

BLAST of Lcy03g003750 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 122.1 bits (305), Expect = 6.2e-24
Identity = 73/236 (30.93%), Postives = 122/236 (51.69%), Query Frame = 0

Query: 1    MGISSVN---EVIWDLDKKGHYSVKSGYHLAVNISSNEEASVSNEDYTTSLWKSVWNLKI 60
            M ISS N     +W  DK+G+YSV+SGY L +++  N  A+ ++ +Y  + W S+W L +
Sbjct: 1083 MPISSYNLQDSWLWHYDKRGNYSVRSGYKLYMHLKCN--ATSASTNYRGTQWNSIWKLTV 1142

Query: 61   LPRAKITIWKILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIWLKF 120
              + KI IW+  ++ +PT  NL ++G      C +C  + E   H F+ CK A+ IW   
Sbjct: 1143 PTKIKIFIWRSAHEHIPTAQNLLLRGIGELPACTICGDRRESIIHAFFHCKRARQIWRTL 1202

Query: 121  LPNAHLFFSVIRKQWN--SLEIWRLLSSFVSKQELEIAGIILWNIWQERNACFHKGREAD 180
             P    F + +  + N   LE+W  L+  +  ++L +A I  W IW +RN+  H  + + 
Sbjct: 1203 FP----FLTCLSAEDNISFLELWSSLTEQLEPKDLNLAAITGWGIWNDRNSLIHGKQVSP 1262

Query: 181  LAYVERKIVKYLEDMKIELCSSLSHRSLETQESH----PSWRPPSEGCWKLNSDAS 228
            + +    +  +L+       + +S+ S  TQ +H      WRP S    KLN+DA+
Sbjct: 1263 VEFKCEWLTPFLDS---HSQAQMSNYSPRTQSNHRPVVQYWRPSSSVSLKLNTDAA 1309

BLAST of Lcy03g003750 vs. NCBI nr
Match: XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis])

HSP 1 Score: 117.1 bits (292), Expect = 2.0e-22
Identity = 71/224 (31.70%), Postives = 109/224 (48.66%), Query Frame = 0

Query: 7    NEVIWDLDKKGHYSVKSGYHLAVNISSNEEASVSNEDYTTSLWKSVWNLKILPRAKITIW 66
            +EV+W  DK+G+YSVKSGY LA  + S    S S  + +   W ++W L++  + KI +W
Sbjct: 1034 DEVLWHYDKRGNYSVKSGYQLA--LRSKFPDSTSCTEASHKYWSALWTLELPEKLKIFMW 1093

Query: 67   KILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIWLKFLPNAHLFFS 126
            +  N++LP+  NL  +       C  C+   E  SH    CK A+ IWL+        FS
Sbjct: 1094 RASNNLLPSAENLWKRKVVEEPTCKRCKLSVETISHALLECKAARKIWLQSP------FS 1153

Query: 127  VIRKQWNSLEIWRLLSSF---VSKQELEIAGIILWNIWQERNACFHKGREADLAYVERKI 186
              R + NS +I+  L +    + K +LE+   + W+ W  RN C   GRE +      K 
Sbjct: 1154 APRLEANSQDIFSTLQNMAKELRKSDLELMVALCWSAWYARNKCIFDGRELNPIISAAKA 1213

Query: 187  VKYLEDMKIELCSSLSHRSLETQESHPSWRPPSEGCWKLNSDAS 228
               L   +       SH S+  +E    W PP +  +K+N DA+
Sbjct: 1214 ESVLTAFQRVRKPQQSHISISIKEKQQEWLPPPQNVFKVNVDAA 1249

BLAST of Lcy03g003750 vs. NCBI nr
Match: XP_035539633.1 (uncharacterized protein LOC108982175 [Juglans regia])

HSP 1 Score: 115.5 bits (288), Expect = 5.8e-22
Identity = 67/230 (29.13%), Postives = 111/230 (48.26%), Query Frame = 0

Query: 7    NEVIWDLDKKGHYSVKSGYHLAVNISSNEEASVSNEDYTTSLWKSVWNLKILPRAKITIW 66
            ++++W     G Y+VKSGYHL+  +   +E   S ++     WK++W L++ P  K+ +W
Sbjct: 884  DKLVWQFTTNGLYTVKSGYHLSKVLECAQEGETSGKEKEKQAWKTIWKLRVTPATKMFLW 943

Query: 67   KILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIW---LKFLPNAHL 126
            +  N+ LPT +NLR +    ++ C  C+++ E S H+ W C  AK +W   +K +    +
Sbjct: 944  RACNEALPTLANLRRRKVVEHSSCLTCKQEAETSGHVLWGCIAAKDVWGQGVKKVQKLSV 1003

Query: 127  FFSVIRKQWNSLEIWRLLSSFVSKQELEIAGIILWNIWQERNACF------HKGREADLA 186
               +I       +IW  L   +S +ELE     +  IW  RN         H      LA
Sbjct: 1004 QSDLI------FDIWSRLVEILSLEELEEVAATMRGIWTRRNNTLLGKEFKHPNALHQLA 1063

Query: 187  YVERKIVKYLEDMKIELCSSLSHRSLETQESHPSWRPPSEGCWKLNSDAS 228
              E  +V Y E +  ++ + L+     T    P W  P EG +K+N DA+
Sbjct: 1064 KTE--LVLYREALAEDIGAKLT-----TNAGFPRWSKPEEGLFKVNWDAA 1100

BLAST of Lcy03g003750 vs. NCBI nr
Match: XP_006491472.1 (uncharacterized protein LOC102626455 [Citrus sinensis])

HSP 1 Score: 115.2 bits (287), Expect = 7.6e-22
Identity = 74/228 (32.46%), Postives = 109/228 (47.81%), Query Frame = 0

Query: 7    NEVIWDLDKKGHYSVKSGYHLAVNISSNEEASVSNEDYTTSLWKSVWNLKILPRAKITIW 66
            +EV+W  DKKG YSVKSGY LA+N +   E   SN   ++ LWK  W L +  + KI +W
Sbjct: 1093 DEVLWHFDKKGEYSVKSGYQLALNQNFPNEPESSNS--SSRLWKIPWMLDLPEKVKIFMW 1152

Query: 67   KILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIW----LKFLPNA- 126
            + L ++LPT  NL  +       C  C+ + E  SH+   CK A+ IW    L   P+  
Sbjct: 1153 RALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQPSKD 1212

Query: 127  --HLFFSVIRKQWNSLEIWRLLSSFVSKQELEIAGIILWNIWQERNACFHKGREADLAYV 186
                FFS I++ W          S  S  E E+  +  W IW  RN    +G+++D  ++
Sbjct: 1213 HNQDFFSAIQEMW----------SRSSTAEAELMIVYCWVIWSARNKFIFEGKKSDSRFL 1272

Query: 187  ERKIVKYLEDMKIELCSSLSHRSLETQESHPSWRPPSEGCWKLNSDAS 228
              K    L+  +        H + +       W+PPS+   KLN DA+
Sbjct: 1273 AAKADSVLKAYQRVSKPGNVHGAKDRGIDQQKWKPPSQNVLKLNVDAA 1308

BLAST of Lcy03g003750 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 3.3e-15
Identity = 60/234 (25.64%), Postives = 109/234 (46.58%), Query Frame = 0

Query: 7   NEVIWDLDKKGHYSVKSGYHLAVNISSNEEASVSNEDYTTSLWKSVWNLKILPRAKITIW 66
           +++IW+ +  G Y+V+SGY L  +  S    +++    +  L   +WNL I+P+ K  +W
Sbjct: 117 DKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLW 176

Query: 67  KILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAKSIWLKFLPNAHLFFS 126
           + L+  L T   L  +G   +  C  C R+ E  +H  + C FA   W   L ++    S
Sbjct: 177 RALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWR--LSDS----S 236

Query: 127 VIRKQWNSLEIWRLLSSFVS-KQELEIAGI-------ILWNIWQER-NACFHKGREADLA 186
           +IR Q  S +    +S+ ++  Q+  ++         ++W IW+ R N  F+K RE+   
Sbjct: 237 LIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRESP-- 296

Query: 187 YVERKIVKYLEDMKIELCSSLSHR-----SLETQESHPSWRPPSEGCWKLNSDA 227
              + ++    +    L ++ SH+     + +  E+   WR P     K N DA
Sbjct: 297 --SKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFDA 340

BLAST of Lcy03g003750 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 4.5e-12
Identity = 37/118 (31.36%), Postives = 68/118 (57.63%), Query Frame = 0

Query: 52  VWNLKILPRAKITIWKILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAK 111
           +W LK  P+ K  +WK+L+  L TG NL+ +   ++  C  C +++E S HLF+ C +A+
Sbjct: 18  IWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQ 77

Query: 112 SIW-LKFLPNAHLFFSVIRKQWNSLEIWRLLSSFVSKQELEIAGI---ILWNIWQERN 166
            +W    +P+  L  + I  +   +E+  LLSS ++ ++ ++  +   ILW +W+ RN
Sbjct: 78  QVWRASGIPHQELRTTGITME-TKMEL--LLSSCLANRQPQLFNLAIWILWRLWKSRN 132

BLAST of Lcy03g003750 vs. TAIR 10
Match: AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 50.1 bits (118), Expect = 2.8e-06
Identity = 23/60 (38.33%), Postives = 35/60 (58.33%), Query Frame = 0

Query: 52  VWNLKILPRAKITIWKILNDVLPTGSNLRIKGCHSNACCFLCRRKEELSSHLFWFCKFAK 111
           +W+LKI P+ K+ IWK LN+ LP G+ L  +       C  CR  E + +H+ + C FA+
Sbjct: 9   IWSLKISPKIKLLIWKALNNALPVGAQLLSRNISIEPFCTRCRDFETI-THILFNCPFAQ 67

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DAR43.6e-2530.36uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A803QH762.3e-2431.76Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A6J1DX303.0e-2430.93uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A803P4T92.8e-2231.60Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A6P9E5W82.8e-2229.13uncharacterized protein LOC108982175 OS=Juglans regia OX=51240 GN=LOC108982175 P... [more]
Match NameE-valueIdentityDescription
XP_022150918.17.3e-2530.36uncharacterized protein LOC111018954 [Momordica charantia][more]
XP_022158377.16.2e-2430.93uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_024950112.12.0e-2231.70uncharacterized protein LOC112496847 [Citrus sinensis][more]
XP_035539633.15.8e-2229.13uncharacterized protein LOC108982175 [Juglans regia][more]
XP_006491472.17.6e-2232.46uncharacterized protein LOC102626455 [Citrus sinensis][more]
Match NameE-valueIdentityDescription
AT3G09510.13.3e-1525.64Ribonuclease H-like superfamily protein [more]
AT3G25270.14.5e-1231.36Ribonuclease H-like superfamily protein [more]
AT3G26855.12.8e-0638.33RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 19..114
e-value: 2.7E-17
score: 63.2
NoneNo IPR availablePANTHERPTHR46736:SF6SUBFAMILY NOT NAMEDcoord: 9..227
NoneNo IPR availablePANTHERPTHR46736FAMILY NOT NAMEDcoord: 9..227

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy03g003750.1Lcy03g003750.1mRNA