Lcy03g002870 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g002870
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	pectinesterase inhibitor-like
Location	Chr03: 10688608 .. 10688958 (+)
RNA-Seq Expression	Lcy03g002870
Synteny	Lcy03g002870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAATTCGTATTCCAATTCCAATTCCAATCTTGTTTTCCTTTGTTGTCTTGTTTTCTCTAGTGTCGTTCTTTCAAATGCAAATTCTGCACCATCAAACGACGTCGCATCGAGCATTTGTCCAAAAACCAGAAACGTATCTTTATGCTGGAGTTTGTTGAAACCCATGGGCAGCATAGACGCTCGAAAGGTGGCCAATTACACCCTTAGCCTTGCCTATACAAGCGCCGGCGAATGTCTCGACCACGCGCGGAGGCTGGAGGCAACGGAGACGGCGAATCCAGAACTTAAAAAACGATATTCGCAGTGCTTAAAGGAGTTGGACTTTGTGGTGTGGGACATAGAATGA

mRNA sequence

ATGGCGAATTCGTATTCCAATTCCAATTCCAATCTTGTTTTCCTTTGTTGTCTTGTTTTCTCTAGTGTCGTTCTTTCAAATGCAAATTCTGCACCATCAAACGACGTCGCATCGAGCATTTGTCCAAAAACCAGAAACGTATCTTTATGCTGGAGTTTGTTGAAACCCATGGGCAGCATAGACGCTCGAAAGGTGGCCAATTACACCCTTAGCCTTGCCTATACAAGCGCCGGCGAATGTCTCGACCACGCGCGGAGGCTGGAGGCAACGGAGACGGCGAATCCAGAACTTAAAAAACGATATTCGCAGTGCTTAAAGGAGTTGGACTTTGTGGTGTGGGACATAGAATGA

Coding sequence (CDS)

ATGGCGAATTCGTATTCCAATTCCAATTCCAATCTTGTTTTCCTTTGTTGTCTTGTTTTCTCTAGTGTCGTTCTTTCAAATGCAAATTCTGCACCATCAAACGACGTCGCATCGAGCATTTGTCCAAAAACCAGAAACGTATCTTTATGCTGGAGTTTGTTGAAACCCATGGGCAGCATAGACGCTCGAAAGGTGGCCAATTACACCCTTAGCCTTGCCTATACAAGCGCCGGCGAATGTCTCGACCACGCGCGGAGGCTGGAGGCAACGGAGACGGCGAATCCAGAACTTAAAAAACGATATTCGCAGTGCTTAAAGGAGTTGGACTTTGTGGTGTGGGACATAGAATGA

Protein sequence

MANSYSNSNSNLVFLCCLVFSSVVLSNANSAPSNDVASSICPKTRNVSLCWSLLKPMGSIDARKVANYTLSLAYTSAGECLDHARRLEATETANPELKKRYSQCLKELDFVVWDIE

Homology

[Close]

BLAST of Lcy03g002870 vs. ExPASy Swiss-Prot
Match: P83326 (Pectinesterase inhibitor OS=Actinidia deliciosa OX=3627 GN=PMEI PE=1 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 2.2e-04
Identity = 33/107 (30.84%), Postives = 52/107 (48.60%), Query Frame = 0


Query: 1   MANSYSNSNSNLVFLCCLVFSSVVLSNANSAPSNDVASSICPKTRNVSLCWSLLKP---M 60
           MA SY +S+  +  L  ++F S +    +    N + S ICPKTRN SLC   L+     
Sbjct: 1   MAFSYCSSSLFVSLLLVILFISPLSQRPSVKAENHLISEICPKTRNPSLCLQALESDPRS 60

Query: 61  GSIDARKVANYTLSLAYTSAGECLDHARRLEATETANPELKKRYSQC 105
            S D + +  +++ +A  SA +       L   +  +P+LK RY  C
Sbjct: 61  ASKDLKGLGQFSIDIAQASAKQTSKIIASL-TNQATDPKLKGRYETC 106

[Close]

BLAST of Lcy03g002870 vs. ExPASy TrEMBL
Match: A0A6J1H4N5 (pectinesterase inhibitor-like OS=Cucurbita moschata OX=3662 GN=LOC111460015 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 6.7e-20
Identity = 53/102 (51.96%), Postives = 69/102 (67.65%), Query Frame = 0


Query: 15  LCCLVFSSVVLSNANSAPSNDVASSICPKTRNVSLCWSLLKPMGSIDARKVANYTLSLAY 74
           LCC++F  VVLS+A++   ND  S+ICP T N  LCW +LK + ++D+  + NYTL+   
Sbjct: 11  LCCVLFFGVVLSHADTTLQNDTISTICPNTSNPLLCWQMLKSVRNLDSVSLTNYTLNFTR 70

Query: 75  TSAGECLDHARRLEATETANPELKKRYSQCLKELDFVVWDIE 117
           TSA ECL +A+ LEA ET N ELKKRYS C K +   V DIE
Sbjct: 71  TSAIECLHYAQGLEAKETVNLELKKRYSYCSKSIKSTVTDIE 112

[Close]

BLAST of Lcy03g002870 vs. ExPASy TrEMBL
Match: A0A5D3BTG4 (Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00350 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 8.2e-18
Identity = 56/106 (52.83%), Postives = 72/106 (67.92%), Query Frame = 0


Query: 12  LVFLCCLVFSSVVLSNANS-APSNDVASSICPKTRNVSLCWSLLKPMGSIDARKVANYTL 71
           LVF+C  +FS+VV S AN+  PSNDVASSICPKTRN S C  +LK  GS D + +A YTL
Sbjct: 17  LVFVCSFLFSNVVSSRANTITPSNDVASSICPKTRNPSFCVDVLKSAGSTDLKVLATYTL 76

Query: 72  SLAYTSAGECLDHARRLEATETANPELKKRYSQCLKELDFVVWDIE 117
           +L  T+A + L+  + L AT T NP+LK +Y  C +  + VV DIE
Sbjct: 77  NLTNTNAEKSLNLVKSLAAT-TTNPQLKNQYLSCYESYEEVVGDIE 121

[Close]

BLAST of Lcy03g002870 vs. ExPASy TrEMBL
Match: A0A1S3C905 (pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103498013 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 8.2e-18
Identity = 56/106 (52.83%), Postives = 72/106 (67.92%), Query Frame = 0


Query: 12  LVFLCCLVFSSVVLSNANS-APSNDVASSICPKTRNVSLCWSLLKPMGSIDARKVANYTL 71
           LVF+C  +FS+VV S AN+  PSNDVASSICPKTRN S C  +LK  GS D + +A YTL
Sbjct: 17  LVFVCSFLFSNVVSSRANTITPSNDVASSICPKTRNPSFCVDVLKSAGSTDLKVLATYTL 76

Query: 72  SLAYTSAGECLDHARRLEATETANPELKKRYSQCLKELDFVVWDIE 117
           +L  T+A + L+  + L AT T NP+LK +Y  C +  + VV DIE
Sbjct: 77  NLTNTNAEKSLNLVKSLAAT-TTNPQLKNQYLSCYESYEEVVGDIE 121

[Close]

BLAST of Lcy03g002870 vs. ExPASy TrEMBL
Match: A0A0A0KHY0 (PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G307370 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 3.1e-17
Identity = 60/121 (49.59%), Postives = 80/121 (66.12%), Query Frame = 0


Query: 3   NSYSNSN-----SNLVFLCCLVFSSVVLSNANSAPSNDVASSICPKTRNVSLCWSLLKPM 62
           NS  NSN     S L+FL  L F SVVL +A++   N + ++ICPKTRN + C ++LKP+
Sbjct: 7   NSSFNSNLGVVSSILIFLFGLFFFSVVLLHADTGSPNVLTTTICPKTRNSTFCKTVLKPV 66

Query: 63  GSIDAR--KVANYTLSLAYTSAGECLDHARRLEATETANPELKKRYSQCLKELDFVVWDI 117
           G  DA   KVANYTL+ A+T+  E L HA+RL ATE  +P LK+RYS+C +  DFV   +
Sbjct: 67  GKSDAALLKVANYTLTFAHTTTVEGLHHAQRL-ATEATDPLLKQRYSECSRRFDFVTKGL 126

[Close]

BLAST of Lcy03g002870 vs. ExPASy TrEMBL
Match: A0A5D3BT93 (Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00330 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.4e-16
Identity = 58/121 (47.93%), Postives = 80/121 (66.12%), Query Frame = 0


Query: 3   NSYSNSN-----SNLVFLCCLVFSSVVLSNANSAPSNDVASSICPKTRNVSLCWSLLKPM 62
           NS  NSN     S L+FL  L F SVVL +A++   N + S+ICPKTRN +LC ++LKP+
Sbjct: 8   NSSFNSNLGVVSSILIFLFGLFFFSVVLLHADTGSPNVITSTICPKTRNSTLCKTVLKPV 67

Query: 63  GSIDAR--KVANYTLSLAYTSAGECLDHARRLEATETANPELKKRYSQCLKELDFVVWDI 117
           G  DA   KVANY+L+LA+T+  E L HA+RL A +  +P LK+RYS+C +  D +   +
Sbjct: 68  GKSDAALLKVANYSLTLAHTTTVEGLQHAQRL-ANDATDPLLKQRYSECSRRFDSMTKGL 127

[Close]

BLAST of Lcy03g002870 vs. NCBI nr
Match: XP_023548317.1 (pectinesterase inhibitor-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 109.4 bits (272), Expect = 2.1e-20
Identity = 53/102 (51.96%), Postives = 74/102 (72.55%), Query Frame = 0


Query: 15  LCCLVFSSVVLSNANSAPSNDVASSICPKTRNVSLCWSLLKPMGSIDARKVANYTLSLAY 74
           LCC++F  +VLS+A++ P ND  S+ICP+TRN SLC  LLKP+ +++A  +ANY + LA+
Sbjct: 11  LCCVLFFGIVLSHADTTPQNDTVSTICPQTRNPSLCRQLLKPVSNLNATNMANYMIDLAH 70

Query: 75  TSAGECLDHARRLEATETANPELKKRYSQCLKELDFVVWDIE 117
           T+A EC    +RL+A ET N ELKKRYS+C + +D  V  IE
Sbjct: 71  TNAVECRRRVQRLKAEETTNLELKKRYSECWQCIDSSVSAIE 112

[Close]

BLAST of Lcy03g002870 vs. NCBI nr
Match: XP_022958860.1 (pectinesterase inhibitor-like [Cucurbita moschata])

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-19
Identity = 53/102 (51.96%), Postives = 69/102 (67.65%), Query Frame = 0


Query: 15  LCCLVFSSVVLSNANSAPSNDVASSICPKTRNVSLCWSLLKPMGSIDARKVANYTLSLAY 74
           LCC++F  VVLS+A++   ND  S+ICP T N  LCW +LK + ++D+  + NYTL+   
Sbjct: 11  LCCVLFFGVVLSHADTTLQNDTISTICPNTSNPLLCWQMLKSVRNLDSVSLTNYTLNFTR 70

Query: 75  TSAGECLDHARRLEATETANPELKKRYSQCLKELDFVVWDIE 117
           TSA ECL +A+ LEA ET N ELKKRYS C K +   V DIE
Sbjct: 71  TSAIECLHYAQGLEAKETVNLELKKRYSYCSKSIKSTVTDIE 112

[Close]

BLAST of Lcy03g002870 vs. NCBI nr
Match: XP_008458684.1 (PREDICTED: pectinesterase inhibitor-like [Cucumis melo] >TYK02953.1 pectinesterase inhibitor-like [Cucumis melo var. makuwa])

HSP 1 Score: 99.8 bits (247), Expect = 1.7e-17
Identity = 56/106 (52.83%), Postives = 72/106 (67.92%), Query Frame = 0


Query: 12  LVFLCCLVFSSVVLSNANS-APSNDVASSICPKTRNVSLCWSLLKPMGSIDARKVANYTL 71
           LVF+C  +FS+VV S AN+  PSNDVASSICPKTRN S C  +LK  GS D + +A YTL
Sbjct: 17  LVFVCSFLFSNVVSSRANTITPSNDVASSICPKTRNPSFCVDVLKSAGSTDLKVLATYTL 76

Query: 72  SLAYTSAGECLDHARRLEATETANPELKKRYSQCLKELDFVVWDIE 117
           +L  T+A + L+  + L AT T NP+LK +Y  C +  + VV DIE
Sbjct: 77  NLTNTNAEKSLNLVKSLAAT-TTNPQLKNQYLSCYESYEEVVGDIE 121

[Close]

BLAST of Lcy03g002870 vs. NCBI nr
Match: XP_004148232.1 (pectinesterase inhibitor [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 6.4e-17
Identity = 60/121 (49.59%), Postives = 80/121 (66.12%), Query Frame = 0


Query: 3   NSYSNSN-----SNLVFLCCLVFSSVVLSNANSAPSNDVASSICPKTRNVSLCWSLLKPM 62
           NS  NSN     S L+FL  L F SVVL +A++   N + ++ICPKTRN + C ++LKP+
Sbjct: 7   NSSFNSNLGVVSSILIFLFGLFFFSVVLLHADTGSPNVLTTTICPKTRNSTFCKTVLKPV 66

Query: 63  GSIDAR--KVANYTLSLAYTSAGECLDHARRLEATETANPELKKRYSQCLKELDFVVWDI 117
           G  DA   KVANYTL+ A+T+  E L HA+RL ATE  +P LK+RYS+C +  DFV   +
Sbjct: 67  GKSDAALLKVANYTLTFAHTTTVEGLHHAQRL-ATEATDPLLKQRYSECSRRFDFVTKGL 126

[Close]

BLAST of Lcy03g002870 vs. NCBI nr
Match: XP_008458686.1 (PREDICTED: pectinesterase inhibitor-like [Cucumis melo] >TYK02951.1 pectinesterase inhibitor-like [Cucumis melo var. makuwa])

HSP 1 Score: 94.4 bits (233), Expect = 7.1e-16
Identity = 58/121 (47.93%), Postives = 80/121 (66.12%), Query Frame = 0


Query: 3   NSYSNSN-----SNLVFLCCLVFSSVVLSNANSAPSNDVASSICPKTRNVSLCWSLLKPM 62
           NS  NSN     S L+FL  L F SVVL +A++   N + S+ICPKTRN +LC ++LKP+
Sbjct: 8   NSSFNSNLGVVSSILIFLFGLFFFSVVLLHADTGSPNVITSTICPKTRNSTLCKTVLKPV 67

Query: 63  GSIDAR--KVANYTLSLAYTSAGECLDHARRLEATETANPELKKRYSQCLKELDFVVWDI 117
           G  DA   KVANY+L+LA+T+  E L HA+RL A +  +P LK+RYS+C +  D +   +
Sbjct: 68  GKSDAALLKVANYSLTLAHTTTVEGLQHAQRL-ANDATDPLLKQRYSECSRRFDSMTKGL 127

The following BLAST results are available for this feature:

BLAST of Lcy03g002870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P83326	2.2e-04	30.84	Pectinesterase inhibitor OS=Actinidia deliciosa OX=3627 GN=PMEI PE=1 SV=2	[more]

BLAST of Lcy03g002870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H4N5	6.7e-20	51.96	pectinesterase inhibitor-like OS=Cucurbita moschata OX=3662 GN=LOC111460015 PE=4...	[more]
A0A5D3BTG4	8.2e-18	52.83	Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3C905	8.2e-18	52.83	pectinesterase inhibitor-like OS=Cucumis melo OX=3656 GN=LOC103498013 PE=4 SV=1	[more]
A0A0A0KHY0	3.1e-17	49.59	PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G307370 PE=4 S...	[more]
A0A5D3BT93	3.4e-16	47.93	Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of Lcy03g002870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023548317.1	2.1e-20	51.96	pectinesterase inhibitor-like [Cucurbita pepo subsp. pepo]	[more]
XP_022958860.1	1.4e-19	51.96	pectinesterase inhibitor-like [Cucurbita moschata]	[more]
XP_008458684.1	1.7e-17	52.83	PREDICTED: pectinesterase inhibitor-like [Cucumis melo] >TYK02953.1 pectinestera...	[more]
XP_004148232.1	6.4e-17	49.59	pectinesterase inhibitor [Cucumis sativus]	[more]
XP_008458686.1	7.1e-16	47.93	PREDICTED: pectinesterase inhibitor-like [Cucumis melo] >TYK02951.1 pectinestera...	[more]

BLAST of Lcy03g002870 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006501	Pectinesterase inhibitor domain	TIGRFAM	TIGR01614	TIGR01614	coord: 9..109 e-value: 4.7E-13 score: 46.8
IPR035513	Invertase/pectin methylesterase inhibitor domain superfamily	GENE3D	1.20.140.40	Invertase/pectin methylesterase inhibitor family protein	coord: 31..116 e-value: 1.7E-8 score: 36.6
IPR035513	Invertase/pectin methylesterase inhibitor domain superfamily	SUPERFAMILY	101148	Plant invertase/pectin methylesterase inhibitor	coord: 38..113
None	No IPR available	PANTHER	PTHR36710	PECTINESTERASE INHIBITOR-LIKE	coord: 11..115
None	No IPR available	PANTHER	PTHR36710:SF6	PECTINESTERASE INHIBITOR-LIKE	coord: 11..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g002870.1	Lcy03g002870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004857	enzyme inhibitor activity