Lcy03g002750 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGAAGATATGGAATCAAGAACATACCATTATCGATAAGGTGGGATTCAATATTTTTATTTGTAAGTTCAATAACACGAAGATCAAGGGATGGATCTTGGACTCCGGACCATGGTTCTACGACAAAGCTATGCTTTTATTCGAGGAACCTAAGGCGGGAGTCAGCTGTGAGGGCATGGAATTCAGGTATGTTTCTCTGTGGACTCATTTTCATAAGTTACCGTATGTTTGTTTTTCCAGGACATCGGCCGAAGGTATTGGAAATCTATTAGGAAAGGTGGAAAAAGTGGATATTCAGGAGGATGCAGATCCATCATGGGGTGTTCTTTACGTATTAAAATTCAAATCGATGTTCATATCCCGCTGAAGAGAGGTATATTCCTGAAATCAGGGAGTAAGGGGGAGGACAAGTGGATTCCGGTTACGTATGAAAAGCTACCGGATTTCTGTTACAGCTGTGGGTCTTTGGGACATACGATTAAAGAGTGTGAAGAAGTTCTGGGGCCAAAAGACAGGGAGTTACGGTATGGTGCATGGCTGAGGGAACCTACCAAATTATGGAACTCTGAAGGTAACTCCTCGGGGTGGATTGCTTATGGCCGTGGAAGGGCAAATAGCTGGAGCGGTGGTAGAGGGCGGGGAAGGATGGGATTTCACGATAGTAATGAGGAAGAGGAGATGGTGCAGCCACCAAACAACCACACCCAGTAG ATGCCGAAGATATGGAATCAAGAACATACCATTATCGATAAGGACATCGGCCGAAGGTATTGGAAATCTATTAGGAAAGGTGGAAAAAGTGGATATTCAGGAGGATGCAGATCCATCATGGGGTGTTCTTTACGTATTAAAATTCAAATCGATGTTCATATCCCGCTGAAGAGAGGTATATTCCTGAAATCAGGGAGTAAGGGGGAGGACAAGTGGATTCCGGTTACGTATGAAAAGCTACCGGATTTCTGTTACAGCTGTGGGTCTTTGGGACATACGATTAAAGAGTGTGAAGAAGTTCTGGGGCCAAAAGACAGGGAGTTACGGTATGGTGCATGGCTGAGGGAACCTACCAAATTATGGAACTCTGAAGGTAACTCCTCGGGGTGGATTGCTTATGGCCGTGGAAGGGCAAATAGCTGGAGCGGTGGTAGAGGGCGGGGAAGGATGGGATTTCACGATAGTAATGAGGAAGAGGAGATGGTGCAGCCACCAAACAACCACACCCAGTAG ATGCCGAAGATATGGAATCAAGAACATACCATTATCGATAAGGACATCGGCCGAAGGTATTGGAAATCTATTAGGAAAGGTGGAAAAAGTGGATATTCAGGAGGATGCAGATCCATCATGGGGTGTTCTTTACGTATTAAAATTCAAATCGATGTTCATATCCCGCTGAAGAGAGGTATATTCCTGAAATCAGGGAGTAAGGGGGAGGACAAGTGGATTCCGGTTACGTATGAAAAGCTACCGGATTTCTGTTACAGCTGTGGGTCTTTGGGACATACGATTAAAGAGTGTGAAGAAGTTCTGGGGCCAAAAGACAGGGAGTTACGGTATGGTGCATGGCTGAGGGAACCTACCAAATTATGGAACTCTGAAGGTAACTCCTCGGGGTGGATTGCTTATGGCCGTGGAAGGGCAAATAGCTGGAGCGGTGGTAGAGGGCGGGGAAGGATGGGATTTCACGATAGTAATGAGGAAGAGGAGATGGTGCAGCCACCAAACAACCACACCCAGTAG MPKIWNQEHTIIDKDIGRRYWKSIRKGGKSGYSGGCRSIMGCSLRIKIQIDVHIPLKRGIFLKSGSKGEDKWIPVTYEKLPDFCYSCGSLGHTIKECEEVLGPKDRELRYGAWLREPTKLWNSEGNSSGWIAYGRGRANSWSGGRGRGRMGFHDSNEEEEMVQPPNNHTQ Homology
BLAST of Lcy03g002750 vs. ExPASy TrEMBL
Match: A0A1Z5S941 (CCHC-type domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3001G347001 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 9.5e-15 Identity = 43/116 (37.07%), Postives = 62/116 (53.45%), Query Frame = 0
BLAST of Lcy03g002750 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 2.3e-13 Identity = 54/123 (43.90%), Postives = 72/123 (58.54%), Query Frame = 0
BLAST of Lcy03g002750 vs. ExPASy TrEMBL
Match: A0A5C7HBH6 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019455 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 6.8e-13 Identity = 44/119 (36.97%), Postives = 64/119 (53.78%), Query Frame = 0
BLAST of Lcy03g002750 vs. ExPASy TrEMBL
Match: A0A5C7IWT1 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_002128 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 1.2e-12 Identity = 41/119 (34.45%), Postives = 65/119 (54.62%), Query Frame = 0
BLAST of Lcy03g002750 vs. ExPASy TrEMBL
Match: A0A803LW54 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 3.4e-12 Identity = 39/86 (45.35%), Postives = 57/86 (66.28%), Query Frame = 0
BLAST of Lcy03g002750 vs. NCBI nr
Match: KAG0532780.1 (hypothetical protein BDA96_04G136500, partial [Sorghum bicolor]) HSP 1 Score: 93.6 bits (231), Expect = 1.8e-15 Identity = 45/121 (37.19%), Postives = 67/121 (55.37%), Query Frame = 0
BLAST of Lcy03g002750 vs. NCBI nr
Match: OQU92454.1 (hypothetical protein SORBI_3001G347001 [Sorghum bicolor]) HSP 1 Score: 90.1 bits (222), Expect = 2.0e-14 Identity = 43/116 (37.07%), Postives = 62/116 (53.45%), Query Frame = 0
BLAST of Lcy03g002750 vs. NCBI nr
Match: KAG0550818.1 (hypothetical protein BDA96_01G370300 [Sorghum bicolor]) HSP 1 Score: 88.6 bits (218), Expect = 5.7e-14 Identity = 44/116 (37.93%), Postives = 61/116 (52.59%), Query Frame = 0
BLAST of Lcy03g002750 vs. NCBI nr
Match: KAE8817564.1 (hypothetical protein D1007_04663 [Hordeum vulgare]) HSP 1 Score: 87.4 bits (215), Expect = 1.3e-13 Identity = 45/111 (40.54%), Postives = 63/111 (56.76%), Query Frame = 0
BLAST of Lcy03g002750 vs. NCBI nr
Match: XP_024642377.1 (uncharacterized protein LOC112422874 [Medicago truncatula]) HSP 1 Score: 87.0 bits (214), Expect = 1.7e-13 Identity = 40/86 (46.51%), Postives = 55/86 (63.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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