Lcy03g002500 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g002500
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	REF/SRPP-like protein At3g05500
Location	Chr03: 8809259 .. 8811621 (-)
RNA-Seq Expression	Lcy03g002500
Synteny	Lcy03g002500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGACTCTCAAGCCGCGTTCTTCTCCACTATAAATCTCCAATCTTCCCCTCTTCTACTCCCATCCGTTATATCGCAAAACATTTCGATTTCACTAAAAAGATCACTCATCAGATCGCATCTTCCTTCCATTCCCAATCTCAAACTCCCCTGAATTTCCCCTGTTCTTGGCTATGGCTGAATCCGATCATTCGTTGCAGCACCAGGAAATGGTACGATCCTCTTTTGACTCTCTCAATACTCGAGTTTGTTCGGATTCGATTCGATTTCGGTTTCTGTTGTTTTCTGTTTGAAACTCGTCGAACCCTAATTCGTATGACCTAATCGGATTCGTCGATTTTGTCCGAAATTTCTATTTTCTGAAACTGTGAGGATTAATTGATTGATTGATTGATTCAATGGATTTGGTTTGTAGGTGGCTAGGGCCGAGGAGGAGAGGCTGAAGTACTTGGAGTTCGTTCAAACGGCGGCGTTTCGAGCGACGGAGTGTTTCTTCAACGTTTATGGCTTTGCGAAGGACCGGTCTGGTCCGCTGAAGCCTGGCGTTGAGACCGTCGAGGGCACTGTAAAGTCCGTCGTTGGTCCTTTGTATAATAAGTACCACGGCGTTCCGATTGAGCTTCTTAAGTTCGTTGATCGCAAGGTTGGTTTTCTTTCTTCTGTTACTGTTCTTGTTTTTTCATGGCTGTGATTGCGGGAGTGGTTTGAATTTGTTATTTGTATGTATGATCTCCAGATAATTTTCTCTTGGATTTCTTATCGGATTGATATGCCAAAAGTTAATTATCAATGTTATACCGTGGATTAAGAATTCTCAATTATGTCATTCTATGAAAAATCTGATACATTTTTTTGGGTTTAAATTTCATATTGTAGATTGTCCATTTTGGTCCTTAATCGTAGTTCCGCCAACTTTTTAGTCGAATTTTCAGAATATCTGGTAGTTTTATCCGTATTTTGCTTTTATCAAATTGATGGCGTAGCTTCAAGTTTGTTGATTAAATACGAACACGTATGAGGCTGAGTATTATGTGAGTGGATATTAGAAGGATCAAACTGGGTATTTTCTGATAGCTCAAAGACTAAATAGTTAATTTTAGAGGTTTGGAGTCTGTGATTATTTTCTGAAAAGTCTTAAAAGTTCATCTAAATAGAGTTTGTACCAATTTTGTACTAGAAAGACCAAAGGGGAGTTCTAATCAATTAGTTAATAGAAAATGGATATGTTAAAGATTCTACATACGTTTTAAATTCTTATGGAGAAGGACCTACTGAAAATTCTTAGTACAGAAACAATTGAGAATTTTAAAGGATTGAGATCGGGAGTAGAAGTTACCTAAAAGATTTTGTATTGTTAATCAAAGCTATATTCTTTCATTTGTAAAGATGTCAAAAACCAAAAACTGTGAGCATTGAAACATTGAGAAATTTTATTTTACAGGGAACTCAATTTTGTTTGATTGTAAATGTGCAGGTGGACGAATCAGTGACTAAGATCGACCGCCATGTTCCTCCAACTGTCAAGCAAGCCTCATCACAGGCTATGTCTGCTGCACAGCAAGCGCCTGAAGTTGCTCGAAACGTAGCCTCTGAGGTCCGACGCACTGGCCTCAAAGACTCTGTCTCTGGAATTGTGAAATCTGTGTATGCCAAGTATGAGCCAACTGCGAAGCAACTCTACTCCAAATACGAGCCCAAGGCCGAGCAATGTGCTGTTTCAGCATGGCACAAGCTCAACCAGCTGCCTGTCTTCCCCACTGTTGCACAGGCCATCTTGCCAACAGCAGCATACTGCACCGAGAAATACAACGAGACCGTGCGAACCACTGCCAAGAAGGGCTACAAGGTCTCTTCATACCTTCCATTGGTCCCTACTGAGAGGATTGCCGAAGTGTTCAGTAAGGACAGAATTGAGATGGAACCCATGGTGAAGTGAGAGCCTTGAGCTTGTTCTTGGTTTTTAGTTACGTAAGAAAGAACACATTATGAATGTTTTTTGTTGGAGGGGATGATTCACTTAGAATGTTGGAGAATTTATTGAATGTTGCCTTCAGTTTTTGATTATTCCTTGAATTGGATGGTGGTATACTTATATGTGGCTTCAGAGATAGCTATGCCATTCTCATTCTATCTTTGAAGGGTTTCTAAGCCTTATATGATGAAGAGCAATAAATACATATACAAATCATTCTAGAATCAGTATAAGCTTGTTCATCTTTTAGTACATTTTTGTCCAATGCTTCTAGTTCTCCTAAAGAAATGAGATTTCTTTTGAGATTGGAACATACCCTACACTTGACAGGATTATACCTTTGATTTAAGAAGAAGCACGGGACACGGACATGACGATACGTCAATTTCTAAA

mRNA sequence

CCGACTCTCAAGCCGCGTTCTTCTCCACTATAAATCTCCAATCTTCCCCTCTTCTACTCCCATCCGTTATATCGCAAAACATTTCGATTTCACTAAAAAGATCACTCATCAGATCGCATCTTCCTTCCATTCCCAATCTCAAACTCCCCTGAATTTCCCCTGTTCTTGGCTATGGCTGAATCCGATCATTCGTTGCAGCACCAGGAAATGGTGGCTAGGGCCGAGGAGGAGAGGCTGAAGTACTTGGAGTTCGTTCAAACGGCGGCGTTTCGAGCGACGGAGTGTTTCTTCAACGTTTATGGCTTTGCGAAGGACCGGTCTGGTCCGCTGAAGCCTGGCGTTGAGACCGTCGAGGGCACTGTAAAGTCCGTCGTTGGTCCTTTGTATAATAAGTACCACGGCGTTCCGATTGAGCTTCTTAAGTTCGTTGATCGCAAGGTGGACGAATCAGTGACTAAGATCGACCGCCATGTTCCTCCAACTGTCAAGCAAGCCTCATCACAGGCTATGTCTGCTGCACAGCAAGCGCCTGAAGTTGCTCGAAACGTAGCCTCTGAGGTCCGACGCACTGGCCTCAAAGACTCTGTCTCTGGAATTGTGAAATCTGTGTATGCCAAGTATGAGCCAACTGCGAAGCAACTCTACTCCAAATACGAGCCCAAGGCCGAGCAATGTGCTGTTTCAGCATGGCACAAGCTCAACCAGCTGCCTGTCTTCCCCACTGTTGCACAGGCCATCTTGCCAACAGCAGCATACTGCACCGAGAAATACAACGAGACCGTGCGAACCACTGCCAAGAAGGGCTACAAGGTCTCTTCATACCTTCCATTGGTCCCTACTGAGAGGATTGCCGAAGTGTTCAGTAAGGACAGAATTGAGATGGAACCCATGGTGAAGTGAGAGCCTTGAGCTTGTTCTTGGTTTTTAGTTACGTAAGAAAGAACACATTATGAATGTTTTTTGTTGGAGGGGATGATTCACTTAGAATGTTGGAGAATTTATTGAATGTTGCCTTCAGTTTTTGATTATTCCTTGAATTGGATGGTGGTATACTTATATGTGGCTTCAGAGATAGCTATGCCATTCTCATTCTATCTTTGAAGGGTTTCTAAGCCTTATATGATGAAGAGCAATAAATACATATACAAATCATTCTAGAATCAGTATAAGCTTGTTCATCTTTTAGTACATTTTTGTCCAATGCTTCTAGTTCTCCTAAAGAAATGAGATTTCTTTTGAGATTGGAACATACCCTACACTTGACAGGATTATACCTTTGATTTAAGAAGAAGCACGGGACACGGACATGACGATACGTCAATTTCTAAA

Coding sequence (CDS)

ATGGCTGAATCCGATCATTCGTTGCAGCACCAGGAAATGGTGGCTAGGGCCGAGGAGGAGAGGCTGAAGTACTTGGAGTTCGTTCAAACGGCGGCGTTTCGAGCGACGGAGTGTTTCTTCAACGTTTATGGCTTTGCGAAGGACCGGTCTGGTCCGCTGAAGCCTGGCGTTGAGACCGTCGAGGGCACTGTAAAGTCCGTCGTTGGTCCTTTGTATAATAAGTACCACGGCGTTCCGATTGAGCTTCTTAAGTTCGTTGATCGCAAGGTGGACGAATCAGTGACTAAGATCGACCGCCATGTTCCTCCAACTGTCAAGCAAGCCTCATCACAGGCTATGTCTGCTGCACAGCAAGCGCCTGAAGTTGCTCGAAACGTAGCCTCTGAGGTCCGACGCACTGGCCTCAAAGACTCTGTCTCTGGAATTGTGAAATCTGTGTATGCCAAGTATGAGCCAACTGCGAAGCAACTCTACTCCAAATACGAGCCCAAGGCCGAGCAATGTGCTGTTTCAGCATGGCACAAGCTCAACCAGCTGCCTGTCTTCCCCACTGTTGCACAGGCCATCTTGCCAACAGCAGCATACTGCACCGAGAAATACAACGAGACCGTGCGAACCACTGCCAAGAAGGGCTACAAGGTCTCTTCATACCTTCCATTGGTCCCTACTGAGAGGATTGCCGAAGTGTTCAGTAAGGACAGAATTGAGATGGAACCCATGGTGAAGTGA

Protein sequence

MAESDHSLQHQEMVARAEEERLKYLEFVQTAAFRATECFFNVYGFAKDRSGPLKPGVETVEGTVKSVVGPLYNKYHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLPVFPTVAQAILPTAAYCTEKYNETVRTTAKKGYKVSSYLPLVPTERIAEVFSKDRIEMEPMVK

Homology

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BLAST of Lcy03g002500 vs. ExPASy Swiss-Prot
Match: Q9MA63 (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana OX=3702 GN=At3g05500 PE=1 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 2.3e-80
Identity = 149/240 (62.08%), Postives = 194/240 (80.83%), Query Frame = 0


Query: 1   MAESDHSLQHQEMVARAEEERLKYLEFVQTAAFRATECFFNVYGFAKDRSGPLKPGVETV 60
           MA      Q +  + + E+ERLKYL+FVQ AA  A   F  +Y  AKD+SGPLKPGVE+V
Sbjct: 1   MATQTDLAQPKLDMTKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESV 60

Query: 61  EGTVKSVVGPLYNKYHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EG VK+VVGP+Y KYH VP+E+LK++D+KVD SVT++DR VPP VKQ S+QA+SAAQ AP
Sbjct: 61  EGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLP 180
            VAR +ASEVRR G+ ++ SG+ KSVY+KYEP AK+LY+ YEPKAEQCAVSAW KLNQLP
Sbjct: 121 IVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTTAKKGYKVSSYLPLVPTERIAEVFSKDRIEMEPM 240
           +FP +AQ  +PTAA+C+EKYN+TV   A+KGY+V+SY+PLVPTERI+++F++++ E EP+
Sbjct: 181 LFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPL 240

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BLAST of Lcy03g002500 vs. ExPASy Swiss-Prot
Match: Q9SW70 (Stress-related protein OS=Vitis riparia OX=96939 GN=SRP PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.5e-71
Identity = 138/230 (60.00%), Postives = 180/230 (78.26%), Query Frame = 0


Query: 1   MAESDHSLQHQEMVARAEEERLKYLEFVQTAAFRATECFFNVYGFAKDRSGPLKPGVETV 60
           MAES+   + Q      EE+RLKYL+FVQ AA     CF ++Y +AK+ SGPLKPGV+TV
Sbjct: 1   MAESE--AKQQPETVHGEEKRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTV 60

Query: 61  EGTVKSVVGPLYNKYHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVK+V+GP+Y K++ VP ELL FVDRKV+ S+ +++RHVP  VK+AS QA++ AQ+AP
Sbjct: 61  EGTVKTVIGPVYEKFYDVPFELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLP 180
           E+A  VASEV+R G+ D+   I K+VY+K EPTAK+L SKYEP AEQ AVSAW  LN+LP
Sbjct: 121 ELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTTAKKGYKVSSYLPLVPTERIAEVF 231
           +FP VAQ ++PTAAY +EKYN++V  TA++GY V+ YLPL+PTERIA+VF
Sbjct: 181 LFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIPTERIAKVF 228

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BLAST of Lcy03g002500 vs. ExPASy Swiss-Prot
Match: A2Y0H2 (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_017815 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.6e-57
Identity = 115/219 (52.51%), Postives = 156/219 (71.23%), Query Frame = 0


Query: 12  EMVARAEEERLKYLEFVQTAAFRATECFFNVYGFAKDRSGPLKPGVETVEGTVKSVVGPL 71
           EM A AEEERL+YLEFVQ AA +        Y +AK  +GPL+PGV+ VEGTVK+VVGP+
Sbjct: 25  EMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPV 84

Query: 72  YNKYHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEVARNVASEVR 131
           Y+++HGVP++LLKF+DRKV ESV ++DR VPP VK           +AP +AR+ A+EVR
Sbjct: 85  YDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVK-----------EAPGLARSAAAEVR 144

Query: 132 RTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLPVFPTVAQAILP 191
           + GL  + +G+ KS  A+ EP A+ LY++YEP AE+ A  AW  LN+LP+ P+V +A+LP
Sbjct: 145 QAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLP 204

Query: 192 TAAYCTEKYNETVRTTAKKGYKVSSYLPLVPTERIAEVF 231
            AA  + +YN  V   AK+G  V++YLPLVPTER++ VF
Sbjct: 205 AAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232

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BLAST of Lcy03g002500 vs. ExPASy Swiss-Prot
Match: Q9FRA7 (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0151300 PE=2 SV=2)

HSP 1 Score: 223.0 bits (567), Expect = 3.6e-57
Identity = 115/219 (52.51%), Postives = 156/219 (71.23%), Query Frame = 0


Query: 12  EMVARAEEERLKYLEFVQTAAFRATECFFNVYGFAKDRSGPLKPGVETVEGTVKSVVGPL 71
           EM A AEEERL+YLEFVQ AA +        Y +AK  +GPL+PGV+ VEGTVK+VVGP+
Sbjct: 25  EMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPV 84

Query: 72  YNKYHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEVARNVASEVR 131
           Y+++HGVP++LLKF+DRKV ESV ++DR VPP VK           +AP +AR+ A+EVR
Sbjct: 85  YDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVK-----------EAPGLARSAAAEVR 144

Query: 132 RTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLPVFPTVAQAILP 191
           + GL  + +G+ KS  A+ EP A+ LY++YEP AE+ A  AW  LN+LP+ P+V +A+LP
Sbjct: 145 QAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLP 204

Query: 192 TAAYCTEKYNETVRTTAKKGYKVSSYLPLVPTERIAEVF 231
            AA  + +YN  V   AK+G  V++YLPLVPTER++ VF
Sbjct: 205 AAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232

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BLAST of Lcy03g002500 vs. ExPASy Swiss-Prot
Match: Q41112 (Stress-related protein OS=Phaseolus vulgaris OX=3885 GN=SRP PE=2 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 5.4e-53
Identity = 112/190 (58.95%), Postives = 138/190 (72.63%), Query Frame = 0


Query: 42  VYGFAKDRSGPLKPGVETVEGTVKSVVGPLYNKYHGVPIELLKFVDRKVDESVTKIDRHV 101
           +Y +AK+R+GPLKPGV TVE  VK+VV P+Y+++H VP+ELLK+ DRKV E    +DRHV
Sbjct: 6   LYSYAKERAGPLKPGVNTVEDAVKTVVAPVYDRFHLVPVELLKYADRKVGE----LDRHV 65

Query: 102 PPTVKQASSQAMSAAQQAPEVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKY 161
           P  VK+ SSQ           AR+V SEVRR    D VS   K+VY+KYEPT        
Sbjct: 66  PSNVKKVSSQ-----------ARSVVSEVRR----DGVSTFAKTVYSKYEPT-------- 125

Query: 162 EPKAEQCAVSAWHKLNQLPVFPTVAQAILPTAAYCTEKYNETVRTTAKKGYKVSSYLPLV 221
              AEQCAVSAW KLNQLP+FP VA A+LP AAYCTEKYNE + ++A+KGY+VS+YLPLV
Sbjct: 126 ---AEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTEKYNEVIVSSAEKGYRVSAYLPLV 165

Query: 222 PTERIAEVFS 232
           PTE+IA+VFS
Sbjct: 186 PTEKIAKVFS 165

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BLAST of Lcy03g002500 vs. ExPASy TrEMBL
Match: A0A1S3BP12 (REF/SRPP-like protein At3g05500 OS=Cucumis melo OX=3656 GN=LOC103492163 PE=3 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 6.5e-118
Identity = 219/241 (90.87%), Postives = 233/241 (96.68%), Query Frame = 0


Query: 1   MAESDHSLQHQEMVARAEEERLKYLEFVQTAAFRATECFFNVYGFAKDRSGPLKPGVETV 60
           MA+SDHS Q Q+M  RA+E+RLKYLEFVQTAAFRATECFFNVYG+AKDRSGPLKPGVETV
Sbjct: 1   MADSDHSSQRQDMAVRADEDRLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKYHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVVGPL NK+HGVPIE+LKFVDRKVDESVTKIDRHVPPTVK ASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLCNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKHASSQAMSAAQQAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLP 180
           EVARNVASEVRR+GLKDSVSGIVKSVYAKYEP+AKQLYSKYEPKAEQCA SAWHKLNQLP
Sbjct: 121 EVARNVASEVRRSGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTTAKKGYKVSSYLPLVPTERIAEVFSKDRIEMEPM 240
           VFPTVAQAILPTAAYCTEKYNETVRT+AKKGYKVSSYLPLVPTERIA+VFSK+ +EMEP+
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 V 242
           V
Sbjct: 241 V 241

[Close]

BLAST of Lcy03g002500 vs. ExPASy TrEMBL
Match: A0A6J1F5J8 (REF/SRPP-like protein At3g05500 OS=Cucurbita moschata OX=3662 GN=LOC111441035 PE=3 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.2e-116
Identity = 216/241 (89.63%), Postives = 231/241 (95.85%), Query Frame = 0


Query: 1   MAESDHSLQHQEMVARAEEERLKYLEFVQTAAFRATECFFNVYGFAKDRSGPLKPGVETV 60
           MA+S+ S QH EM ARAEEERLKYLEFVQTAAFRATECFFNVYG+AK+R GPL+PGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKYHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNK+HGVPIE+LKFVDRKVD SVTKIDRHVPPT+KQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLP 180
           E+ARNVA EVR TGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCA SAWH+LNQLP
Sbjct: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTTAKKGYKVSSYLPLVPTERIAEVFSKDRIEMEPM 240
           VFPTVAQAILPTA YCTEKYNETV++T+KKGYKVSSYLPLVPTERIA+VFSKDRIEMEP+
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 V 242
           V
Sbjct: 241 V 241

[Close]

BLAST of Lcy03g002500 vs. ExPASy TrEMBL
Match: A0A6J1HXN7 (REF/SRPP-like protein At3g05500 OS=Cucurbita maxima OX=3661 GN=LOC111468972 PE=3 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.6e-116
Identity = 215/241 (89.21%), Postives = 231/241 (95.85%), Query Frame = 0


Query: 1   MAESDHSLQHQEMVARAEEERLKYLEFVQTAAFRATECFFNVYGFAKDRSGPLKPGVETV 60
           MA+S+ S QH EM ARAEEERLKYLEFVQTAAFRA+ECFFN YG+AK+R GPL+PGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRASECFFNAYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKYHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNK+HGVPIE+LKFVDRKVDESVTKIDRHVPPT+KQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLP 180
           E+ARNVA EVR TGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCA SAWH+LNQLP
Sbjct: 121 EIARNVAMEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTTAKKGYKVSSYLPLVPTERIAEVFSKDRIEMEPM 240
           VFPTVAQAILPTA YCTEKYNETV++T+KKGYKVSSYLPLVPTERIA+VFSKDRIEMEP+
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 V 242
           V
Sbjct: 241 V 241

[Close]

BLAST of Lcy03g002500 vs. ExPASy TrEMBL
Match: A0A0A0M1J0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569430 PE=3 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 2.0e-114
Identity = 215/241 (89.21%), Postives = 229/241 (95.02%), Query Frame = 0


Query: 1   MAESDHSLQHQEMVARAEEERLKYLEFVQTAAFRATECFFNVYGFAKDRSGPLKPGVETV 60
           MA+SD S Q Q+M  RA++  LKYLEFVQTAAFRATECFFNVYG+AKDRSGPLKPGVETV
Sbjct: 1   MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKYHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVV PLYNK+HGVPIE+LKFVDRKVDESVTKIDRHVPPTVKQASSQAM AAQQAP
Sbjct: 61  EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLP 180
           EVAR+VASEVRR GLKDSVSGIVKSVYAKYEP+AKQLYSKYEPKAEQCA SAWHKLNQLP
Sbjct: 121 EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTTAKKGYKVSSYLPLVPTERIAEVFSKDRIEMEPM 240
           VFPTVAQAILPTAAYCTEKYNETVRT+AKKGYKVSSYLPLVPTERIA+VFSK+ +EMEP+
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 V 242
           V
Sbjct: 241 V 241

[Close]

BLAST of Lcy03g002500 vs. ExPASy TrEMBL
Match: A0A6J1CYC3 (REF/SRPP-like protein At3g05500 OS=Momordica charantia OX=3673 GN=LOC111015336 PE=3 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 3.3e-114
Identity = 215/241 (89.21%), Postives = 229/241 (95.02%), Query Frame = 0


Query: 1   MAESDHSLQHQEMVARAEEERLKYLEFVQTAAFRATECFFNVYGFAKDRSGPLKPGVETV 60
           MAE D S+Q  EM ARAEEERLKYL FVQTAAF AT CFFNVYG+AKDRSGPLKPGVETV
Sbjct: 1   MAEPDPSVQQLEMAARAEEERLKYLAFVQTAAFFATACFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKYHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNK+HGVPIE+LKFVDRKVDESVTKIDRHVPPTVKQASSQA+SAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAVSAAQQAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLP 180
           EVAR+VASEVRR+GLKDS+SGIVKSVYAKYEPTAKQLY +YEPKAEQCA  AWHKLNQLP
Sbjct: 121 EVARSVASEVRRSGLKDSLSGIVKSVYAKYEPTAKQLYFEYEPKAEQCAALAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTTAKKGYKVSSYLPLVPTERIAEVFSKDRIEMEPM 240
           VFP VAQAILPTAAYCTEKYNETVRTTA+KGYKVSSYLPLVPTERIA+VFSKDR+E+EP+
Sbjct: 181 VFPHVAQAILPTAAYCTEKYNETVRTTAEKGYKVSSYLPLVPTERIAKVFSKDRVEVEPL 240

Query: 241 V 242
           V
Sbjct: 241 V 241

[Close]

BLAST of Lcy03g002500 vs. NCBI nr
Match: XP_023530281.1 (REF/SRPP-like protein At3g05500 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 433.3 bits (1113), Expect = 1.3e-117
Identity = 218/241 (90.46%), Postives = 233/241 (96.68%), Query Frame = 0


Query: 1   MAESDHSLQHQEMVARAEEERLKYLEFVQTAAFRATECFFNVYGFAKDRSGPLKPGVETV 60
           MA+S+ S QHQEM ARAEEERLKYLEFVQTAAFRATECFFNVYG+AK+R GPL+PGVETV
Sbjct: 1   MADSNPSSQHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKYHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNK+HGVPIE+LKFVDRKVDESVTKIDRHVPPT+KQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLP 180
           E+ARNVA EVR TGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCA SAWH+LNQLP
Sbjct: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTTAKKGYKVSSYLPLVPTERIAEVFSKDRIEMEPM 240
           VFPTVAQAILPTA YCTEKYNETV++T+KKGYKVSSYLPLVPTERIA+VFSKDRIEMEP+
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 V 242
           V
Sbjct: 241 V 241

[Close]

BLAST of Lcy03g002500 vs. NCBI nr
Match: XP_008450634.1 (PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis melo])

HSP 1 Score: 433.3 bits (1113), Expect = 1.3e-117
Identity = 219/241 (90.87%), Postives = 233/241 (96.68%), Query Frame = 0


Query: 1   MAESDHSLQHQEMVARAEEERLKYLEFVQTAAFRATECFFNVYGFAKDRSGPLKPGVETV 60
           MA+SDHS Q Q+M  RA+E+RLKYLEFVQTAAFRATECFFNVYG+AKDRSGPLKPGVETV
Sbjct: 1   MADSDHSSQRQDMAVRADEDRLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKYHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVVGPL NK+HGVPIE+LKFVDRKVDESVTKIDRHVPPTVK ASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLCNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKHASSQAMSAAQQAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLP 180
           EVARNVASEVRR+GLKDSVSGIVKSVYAKYEP+AKQLYSKYEPKAEQCA SAWHKLNQLP
Sbjct: 121 EVARNVASEVRRSGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTTAKKGYKVSSYLPLVPTERIAEVFSKDRIEMEPM 240
           VFPTVAQAILPTAAYCTEKYNETVRT+AKKGYKVSSYLPLVPTERIA+VFSK+ +EMEP+
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 V 242
           V
Sbjct: 241 V 241

[Close]

BLAST of Lcy03g002500 vs. NCBI nr
Match: KAG6588484.1 (REF/SRPP-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022313.1 REF/SRPP-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 431.4 bits (1108), Expect = 5.1e-117
Identity = 217/241 (90.04%), Postives = 232/241 (96.27%), Query Frame = 0


Query: 1   MAESDHSLQHQEMVARAEEERLKYLEFVQTAAFRATECFFNVYGFAKDRSGPLKPGVETV 60
           MA+S+ S QH EM ARAEEERLKYLEFVQTAAFRATECFFNVYG+AK+R GPL+PGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKYHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNK+HGVPIE+LKFVDRKVDESVTKIDRHVPPT+KQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLP 180
           E+ARNVA EVR TGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCA SAWH+LNQLP
Sbjct: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTTAKKGYKVSSYLPLVPTERIAEVFSKDRIEMEPM 240
           VFPTVAQAILPTA YCTEKYNETV++T+KKGYKVSSYLPLVPTERIA+VFSKDRIEMEP+
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 V 242
           V
Sbjct: 241 V 241

[Close]

BLAST of Lcy03g002500 vs. NCBI nr
Match: XP_038879426.1 (REF/SRPP-like protein At3g05500 [Benincasa hispida])

HSP 1 Score: 431.4 bits (1108), Expect = 5.1e-117
Identity = 220/241 (91.29%), Postives = 234/241 (97.10%), Query Frame = 0


Query: 1   MAESDHSLQHQEMVARAEEERLKYLEFVQTAAFRATECFFNVYGFAKDRSGPLKPGVETV 60
           MAESD S Q QE VARAE+ERLKYLEFVQTA FRATECFFNVYG+AKDRSGPLKPGVETV
Sbjct: 1   MAESDPSSQRQETVARAEQERLKYLEFVQTATFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKYHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNK+HGVPIE+LKFVDRKVDESVT+IDRHVPPTVKQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTRIDRHVPPTVKQASSQAMSAAQQAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLP 180
           EVAR+VASEVRRTGLK+SVSGIVKSVYAK EPTAK+LYSKYEPKAEQCAVSAWHKLNQLP
Sbjct: 121 EVARSVASEVRRTGLKESVSGIVKSVYAKCEPTAKELYSKYEPKAEQCAVSAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTTAKKGYKVSSYLPLVPTERIAEVFSKDRIEMEPM 240
           VFPTVAQAILPTAAYCTEKYNETVRT+A+KGYKVSSYLPLVPTERIAEVFSK+ +EM+P+
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAEVFSKNGVEMKPL 240

Query: 241 V 242
           V
Sbjct: 241 V 241

[Close]

BLAST of Lcy03g002500 vs. NCBI nr
Match: XP_022933698.1 (REF/SRPP-like protein At3g05500 [Cucurbita moschata])

HSP 1 Score: 429.1 bits (1102), Expect = 2.5e-116
Identity = 216/241 (89.63%), Postives = 231/241 (95.85%), Query Frame = 0


Query: 1   MAESDHSLQHQEMVARAEEERLKYLEFVQTAAFRATECFFNVYGFAKDRSGPLKPGVETV 60
           MA+S+ S QH EM ARAEEERLKYLEFVQTAAFRATECFFNVYG+AK+R GPL+PGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKYHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNK+HGVPIE+LKFVDRKVD SVTKIDRHVPPT+KQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLP 180
           E+ARNVA EVR TGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCA SAWH+LNQLP
Sbjct: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTTAKKGYKVSSYLPLVPTERIAEVFSKDRIEMEPM 240
           VFPTVAQAILPTA YCTEKYNETV++T+KKGYKVSSYLPLVPTERIA+VFSKDRIEMEP+
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 V 242
           V
Sbjct: 241 V 241

[Close]

BLAST of Lcy03g002500 vs. TAIR 10
Match: AT3G05500.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 300.1 bits (767), Expect = 1.7e-81
Identity = 149/240 (62.08%), Postives = 194/240 (80.83%), Query Frame = 0


Query: 1   MAESDHSLQHQEMVARAEEERLKYLEFVQTAAFRATECFFNVYGFAKDRSGPLKPGVETV 60
           MA      Q +  + + E+ERLKYL+FVQ AA  A   F  +Y  AKD+SGPLKPGVE+V
Sbjct: 1   MATQTDLAQPKLDMTKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESV 60

Query: 61  EGTVKSVVGPLYNKYHGVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EG VK+VVGP+Y KYH VP+E+LK++D+KVD SVT++DR VPP VKQ S+QA+SAAQ AP
Sbjct: 61  EGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLP 180
            VAR +ASEVRR G+ ++ SG+ KSVY+KYEP AK+LY+ YEPKAEQCAVSAW KLNQLP
Sbjct: 121 IVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTTAKKGYKVSSYLPLVPTERIAEVFSKDRIEMEPM 240
           +FP +AQ  +PTAA+C+EKYN+TV   A+KGY+V+SY+PLVPTERI+++F++++ E EP+
Sbjct: 181 LFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPL 240

[Close]

BLAST of Lcy03g002500 vs. TAIR 10
Match: AT2G47780.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 183.7 bits (465), Expect = 1.7e-46
Identity = 97/217 (44.70%), Postives = 136/217 (62.67%), Query Frame = 0


Query: 18  EEERLKYLEFVQTAAFRATECFFNVYGFAKDRSGPLKPGVETVEGTVKSVVGPLYNKYHG 77
           +E +LK+LEF+Q AA     CF  +Y  AKD +GPLK GVE +E  V++V+ PLY K+H 
Sbjct: 37  DEMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHD 96

Query: 78  VPIELLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEVARNVASEVRRTGLKD 137
           VP +LL FVDRKVD+    ++ +VP  VKQASSQA++           VA+EV+RTG+ D
Sbjct: 97  VPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQALT-----------VATEVQRTGVVD 156

Query: 138 SVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLPVFPTVAQAILPTAAYCT 197
           +   I +SV             KYEP AE  A + W  LNQLP+FP VA  ++PTA Y +
Sbjct: 157 TTKSIARSV-----------RDKYEPAAEYYAATLWRLLNQLPLFPEVAHLVIPTAFYWS 216

Query: 198 EKYNETVRTTAKKGYKVSSYLPLVPTERIAEVFSKDR 235
           EKYN+ VR    + Y  + YLP++P E+I+++  +D+
Sbjct: 217 EKYNDAVRYVGDRDYFGAEYLPMIPIEKISDILEQDQ 231

[Close]

BLAST of Lcy03g002500 vs. TAIR 10
Match: AT1G67360.2 (Rubber elongation factor protein (REF) )

HSP 1 Score: 122.5 bits (306), Expect = 4.7e-28
Identity = 78/217 (35.94%), Postives = 107/217 (49.31%), Query Frame = 0


Query: 17  AEEERLKYLEFVQTAAFRATECFFNVYGFAKDRSGPLKPGVETVEGTVKSVVGPLYNKYH 76
           ++E  LK+L FV+ A         N+Y +AK  SGPLK  VE VEG V +VV P+Y K+ 
Sbjct: 8   SKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFK 67

Query: 77  GVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEVARNVASEVRRTGLK 136
            VP  LL F+D KV E   K D H PP  K+  +QA     +A E A++   E R  G K
Sbjct: 68  DVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPK 127

Query: 137 DSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLPVFPTVAQAILPTAAYC 196
            + +      YA  E         Y+      +V  W KLNQ      +    LP AA+ 
Sbjct: 128 AAFN------YAATE---------YKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHF 187

Query: 197 TEKYNETVRTTAKKGYKVSSYLPLVPTERIAEVFSKD 234
           + +YN+ V      GY +  YLPLVP + I + + K+
Sbjct: 188 SSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAYEKE 209

[Close]

BLAST of Lcy03g002500 vs. TAIR 10
Match: AT1G67360.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 122.5 bits (306), Expect = 4.7e-28
Identity = 78/217 (35.94%), Postives = 107/217 (49.31%), Query Frame = 0


Query: 17  AEEERLKYLEFVQTAAFRATECFFNVYGFAKDRSGPLKPGVETVEGTVKSVVGPLYNKYH 76
           ++E  LK+L FV+ A         N+Y +AK  SGPLK  VE VEG V +VV P+Y K+ 
Sbjct: 8   SKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFK 67

Query: 77  GVPIELLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEVARNVASEVRRTGLK 136
            VP  LL F+D KV E   K D H PP  K+  +QA     +A E A++   E R  G K
Sbjct: 68  DVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPK 127

Query: 137 DSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAVSAWHKLNQLPVFPTVAQAILPTAAYC 196
            + +      YA  E         Y+      +V  W KLNQ      +    LP AA+ 
Sbjct: 128 AAFN------YAATE---------YKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHF 187

Query: 197 TEKYNETVRTTAKKGYKVSSYLPLVPTERIAEVFSKD 234
           + +YN+ V      GY +  YLPLVP + I + + K+
Sbjct: 188 SSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAYEKE 209

The following BLAST results are available for this feature:

BLAST of Lcy03g002500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MA63	2.3e-80	62.08	REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana OX=3702 GN=At3g05500 PE=...	[more]
Q9SW70	1.5e-71	60.00	Stress-related protein OS=Vitis riparia OX=96939 GN=SRP PE=2 SV=1	[more]
A2Y0H2	3.6e-57	52.51	REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_0...	[more]
Q9FRA7	3.6e-57	52.51	REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonic...	[more]
Q41112	5.4e-53	58.95	Stress-related protein OS=Phaseolus vulgaris OX=3885 GN=SRP PE=2 SV=1	[more]

BLAST of Lcy03g002500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BP12	6.5e-118	90.87	REF/SRPP-like protein At3g05500 OS=Cucumis melo OX=3656 GN=LOC103492163 PE=3 SV=...	[more]
A0A6J1F5J8	1.2e-116	89.63	REF/SRPP-like protein At3g05500 OS=Cucurbita moschata OX=3662 GN=LOC111441035 PE...	[more]
A0A6J1HXN7	1.6e-116	89.21	REF/SRPP-like protein At3g05500 OS=Cucurbita maxima OX=3661 GN=LOC111468972 PE=3...	[more]
A0A0A0M1J0	2.0e-114	89.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569430 PE=3 SV=1	[more]
A0A6J1CYC3	3.3e-114	89.21	REF/SRPP-like protein At3g05500 OS=Momordica charantia OX=3673 GN=LOC111015336 P...	[more]

BLAST of Lcy03g002500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023530281.1	1.3e-117	90.46	REF/SRPP-like protein At3g05500 [Cucurbita pepo subsp. pepo]	[more]
XP_008450634.1	1.3e-117	90.87	PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis melo]	[more]
KAG6588484.1	5.1e-117	90.04	REF/SRPP-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG70223...	[more]
XP_038879426.1	5.1e-117	91.29	REF/SRPP-like protein At3g05500 [Benincasa hispida]	[more]
XP_022933698.1	2.5e-116	89.63	REF/SRPP-like protein At3g05500 [Cucurbita moschata]	[more]

BLAST of Lcy03g002500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05500.1	1.7e-81	62.08	Rubber elongation factor protein (REF)	[more]
AT2G47780.1	1.7e-46	44.70	Rubber elongation factor protein (REF)	[more]
AT1G67360.2	4.7e-28	35.94	Rubber elongation factor protein (REF)	[more]
AT1G67360.1	4.7e-28	35.94	Rubber elongation factor protein (REF)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008802	Rubber elongation factor	PFAM	PF05755	REF	coord: 17..231 e-value: 2.5E-91 score: 305.1
IPR008802	Rubber elongation factor	PANTHER	PTHR33732	REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940	coord: 1..233
None	No IPR available	PANTHER	PTHR33732:SF9	REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940	coord: 1..233

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g002500.1	Lcy03g002500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080186	developmental vegetative growth
biological_process	GO:0034389	lipid droplet organization
biological_process	GO:0019915	lipid storage
biological_process	GO:0045927	positive regulation of growth
biological_process	GO:1902584	positive regulation of response to water deprivation
biological_process	GO:0006414	translational elongation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005811	lipid droplet
molecular_function	GO:0003746	translation elongation factor activity