Lcy03g002470 (gene) Sponge gourd (P93075) v1

Overview
NameLcy03g002470
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr03: 8737171 .. 8737843 (+)
RNA-Seq ExpressionLcy03g002470
SyntenyLcy03g002470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATGCAATGGGTCAGTTCTTCTCACAGGGGGGTAAGGAGATCTTAATAAAGAGCATTGTCCAAGTCATTCCTAAGTATGTAATGGGTTATTTCTGGATTCCTATATCTATATTATCAGGTATTTTCAAACTGTGTGCAAAATTCTGGTGGGGATCCAATGGTGTCAAGAGTAAAATGCATTGGCAGCGGTGGGATAATCTTTGTAAGCCAAAAGAGGTAGGCAGGCTGAATTTTCGGGATTTAGTTAATTTCAATCAAGCTATGCTAGCAAAACAGGCTTGGAGAGTTCTTATTAATCCTAATCTCACTGTGTCCAAAGTTTTGTGGAAAATATTGTCCTTCATCATCCGTTCTTCATGGGAAAGTCTCGTCTTCATCTTCATTTTTTTGGAAAGGATTTGTGTGGGGGATGGAACTTTTTAAGGGGGGTTTGAGGAAAATTTTTGGAAACAGGCATACTATTCATATATTCCGTGATCCTTGGATTCCTCGACCCTCTACGTTTAAGGTGGTAACTCCTCCAATTCCATCTATGGAGGATGCTCTTGTAGCGGACTTTATTACATCGTCTTCACAATGGGATGTGCGTAAATTAAATCAATTTTTCATTGGTTTTGATGTGGAAGCAATTCAATGTTTGTCTATAAGCAGTACAACTCCGGATAAATAG

mRNA sequence

ATGTATGCAATGGGTCAGTTCTTCTCACAGGGGGGTATTTTCAAACTGTGTGCAAAATTCTGGTGGGGATCCAATGGTGTCAAGAGTAAAATGCATTGGCAGCGGTGGGATAATCTTTGTAAGCCAAAAGAGGTAGGCAGGCTGAATTTTCGGGATTTAGTTAATTTCAATCAAGCTATGCTAGCAAAACAGGCTTGGAGAGTTCTTATTAATCCTAATCTCACTGTGTCCAAAGTTTTGTGGAAAATATTGTCCTTCATCATCCGTTCTTCATGGGAAAGATTTGTGTGGGGGATGGAACTTTTTAAGGGGGGTTTGAGGAAAATTTTTGGAAACAGGCATACTATTCATATATTCCGTGATCCTTGGATTCCTCGACCCTCTACGTTTAAGGTGGTAACTCCTCCAATTCCATCTATGGAGGATGCTCTTGTAGCGGACTTTATTACATCGTCTTCACAATGGGATGTGCGTAAATTAAATCAATTTTTCATTGGTTTTGATGTGGAAGCAATTCAATGTTTGTCTATAAGCAGTACAACTCCGGATAAATAG

Coding sequence (CDS)

ATGTATGCAATGGGTCAGTTCTTCTCACAGGGGGGTATTTTCAAACTGTGTGCAAAATTCTGGTGGGGATCCAATGGTGTCAAGAGTAAAATGCATTGGCAGCGGTGGGATAATCTTTGTAAGCCAAAAGAGGTAGGCAGGCTGAATTTTCGGGATTTAGTTAATTTCAATCAAGCTATGCTAGCAAAACAGGCTTGGAGAGTTCTTATTAATCCTAATCTCACTGTGTCCAAAGTTTTGTGGAAAATATTGTCCTTCATCATCCGTTCTTCATGGGAAAGATTTGTGTGGGGGATGGAACTTTTTAAGGGGGGTTTGAGGAAAATTTTTGGAAACAGGCATACTATTCATATATTCCGTGATCCTTGGATTCCTCGACCCTCTACGTTTAAGGTGGTAACTCCTCCAATTCCATCTATGGAGGATGCTCTTGTAGCGGACTTTATTACATCGTCTTCACAATGGGATGTGCGTAAATTAAATCAATTTTTCATTGGTTTTGATGTGGAAGCAATTCAATGTTTGTCTATAAGCAGTACAACTCCGGATAAATAG

Protein sequence

MYAMGQFFSQGGIFKLCAKFWWGSNGVKSKMHWQRWDNLCKPKEVGRLNFRDLVNFNQAMLAKQAWRVLINPNLTVSKVLWKILSFIIRSSWERFVWGMELFKGGLRKIFGNRHTIHIFRDPWIPRPSTFKVVTPPIPSMEDALVADFITSSSQWDVRKLNQFFIGFDVEAIQCLSISSTTPDK
Homology
BLAST of Lcy03g002470 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-11
Identity = 44/118 (37.29%), Postives = 60/118 (50.85%), Query Frame = 0

Query: 19  KFWWGSNGVKSKMHWQRWDNLCKPKE-VGRLNFRDLVNFNQAMLAKQAWRVLINPNLTVS 78
           +FWW S   K K+ W  W  LCK KE  G L FRDL  FNQA+LAKQ++R++  P+  +S
Sbjct: 27  EFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTLLS 86

Query: 79  KVL---------WKILSFIIRSS--WERFVWGMELFKGGLRKIFGNRHTIHIFRDPWI 125
           ++L             S   R S  W   + G EL   GL +  G+     ++ D WI
Sbjct: 87  RLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWI 144

BLAST of Lcy03g002470 vs. ExPASy TrEMBL
Match: A0A6J1BRN0 (uncharacterized protein LOC111004787 OS=Momordica charantia OX=3673 GN=LOC111004787 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 2.4e-35
Identity = 82/192 (42.71%), Postives = 114/192 (59.38%), Query Frame = 0

Query: 2   YAMGQFFSQGG----IFKLCAKFWWGSNGVKSKMHWQRWDNLCKPKEVGRLNFRDLVNFN 61
           YAM  F    G    + ++ A+FWWGS+    K+HW  W+ +C PKE+G LNFRDL  FN
Sbjct: 28  YAMSVFRLPKGFCEEVSQMFARFWWGSSNDTKKLHWMSWERMCLPKELGGLNFRDLEGFN 87

Query: 62  QAMLAKQAWRVLINPNLTVSKVL---WKILSFIIRSS--------WERFVWGMELFKGGL 121
           QA++AKQ WRVL NPN+ VS+VL   +   S +++++        W+ F+WG +L   GL
Sbjct: 88  QALVAKQVWRVLQNPNILVSRVLKAKYFHDSLVLQATHLRNQSYFWKGFIWGRDLLIKGL 147

Query: 122 RKIFGNRHTIHIFRDPWIPRPSTFKVVTPPIPSMEDALVADFITSSSQWDVRKLNQFFIG 179
           R   GN  TI+IF DPWIPRP +F+ +T P     D  VAD I  + QWDV  ++  F  
Sbjct: 148 RSRVGNGSTINIFSDPWIPRPYSFRPITAPF-GPYDVKVADLINPNGQWDVHLISYIFCE 207

BLAST of Lcy03g002470 vs. ExPASy TrEMBL
Match: A0A803NXV2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.0e-30
Identity = 65/165 (39.39%), Postives = 103/165 (62.42%), Query Frame = 0

Query: 19  KFWWGSNGVKSKMHWQRWDNLCKPKEVGRLNFRDLVNFNQAMLAKQAWRVLINPNLTVSK 78
           +FWWG+N  K K+ W +W+++C+PK  G L F+DLV FNQAM+AKQ WR++ +P+   ++
Sbjct: 218 QFWWGTNNDKRKIAWVKWEDVCQPKSKGGLGFKDLVLFNQAMVAKQVWRLMQSPHSLAAR 277

Query: 79  VL-------WKILSFIIRSS----WERFVWGMELFKGGLRKIFGNRHTIHIFRDPWIPRP 138
           VL         IL    R      W   +WG++L   GLRK+ G+  ++  FRDPWIPRP
Sbjct: 278 VLKYKYFPNTSILDAKDRQGSSHLWSSLIWGLKLLHLGLRKVVGDGQSVDAFRDPWIPRP 337

Query: 139 STFKVVTPPIPSMEDALVADFITSSSQWDVRKLNQFFIGFDVEAI 173
            +F+ ++P    ++  +V++ I S   WDV+ L+Q+F+  D++ I
Sbjct: 338 VSFRPISP--APIDGVMVSELIGSEGTWDVQTLSQYFLSLDIDVI 380

BLAST of Lcy03g002470 vs. ExPASy TrEMBL
Match: A0A803NHI3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 2.3e-30
Identity = 75/187 (40.11%), Postives = 104/187 (55.61%), Query Frame = 0

Query: 2   YAMGQFFSQGGIF-----KLCAKFWWGSNGVKSKMHWQRWDNLCKPKEVGRLNFRDLVNF 61
           Y M  F    G+       +  +FWWG+ G K K+ W  WD++C+PK  G L F+DLV F
Sbjct: 358 YLMSMFRFTAGLSCDKLRSIILQFWWGTKGDKKKIAWVNWDDVCQPKVKGGLGFKDLVLF 417

Query: 62  NQAMLAKQAWRVLINPNLTVSKVL-------WKILSFIIRSS----WERFVWGMELFKGG 121
           NQ M+AKQ WR+  +P+    +VL         IL    R      W   +WG+EL + G
Sbjct: 418 NQDMVAKQVWRLFQSPDSLPGRVLKHKYFPGTSILEAKDRQGSSHLWSSLIWGLELLRIG 477

Query: 122 LRKIFGNRHTIHIFRDPWIPRPSTFKVVTPPIPSMEDALVADFITSSSQWDVRKLNQFFI 173
           +RK+FG+ H+I  FRDPWIPRP TF+ +T P+PS     V D I     W+++ L Q F 
Sbjct: 478 MRKVFGDGHSIDAFRDPWIPRPRTFRPIT-PVPS-ASVKVHDLIDVGGGWNLQALAQHFF 537

BLAST of Lcy03g002470 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.3e-28
Identity = 73/165 (44.24%), Postives = 95/165 (57.58%), Query Frame = 0

Query: 26   GVKSKMHWQRWDNLCKPKEVGRLNFRDLVNFNQAMLAKQAWRVLINPNLTVSKVL----W 85
            G   K+HW +W  +C PKE G LNFRDL  FNQA++AK  WR L +PNL VSKVL    +
Sbjct: 924  GESRKLHWMKWGRMCYPKECGGLNFRDLEGFNQALVAKHVWRFLQHPNLLVSKVLKHKYF 983

Query: 86   KILSFIIRSS-------WERFVWGMELFKGGLRKIFGNRHTIHIFRDPWIPRPSTFKVVT 145
            K  S +  S+       W+ F+WG +L   GLR   GN  TI  F DPW+PRP+TFK + 
Sbjct: 984  KDTSLLQASNNSKSSYFWKGFLWGRDLLVKGLRLRVGNGSTIKAFSDPWLPRPTTFKPLR 1043

Query: 146  PPIPSMEDALVADFITSSSQWDVRKLNQFFIGFDVEAIQCLSISS 180
                ++ D  VA FIT+   WDV  ++  F   D + I  + ISS
Sbjct: 1044 FNNGAL-DTTVASFITADGNWDVTSISHSFCNEDRDLILSMPISS 1087

BLAST of Lcy03g002470 vs. ExPASy TrEMBL
Match: A0A803Q6Z2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 2.8e-28
Identity = 72/177 (40.68%), Postives = 101/177 (57.06%), Query Frame = 0

Query: 13   IFKLCAKFWWGSNGVKSKMHWQRWDNLCKPKEVGRLNFRDLVNFNQAMLAKQAWRVLINP 72
            I +L ++FWWG +   + +HW+ W  LCK K  G + FR+ V+FNQA+LAKQAWR+L +P
Sbjct: 1555 IEQLMSRFWWGKSANGNAIHWKNWKFLCKSKVHGGMGFRNFVHFNQALLAKQAWRILEDP 1614

Query: 73   NLTVSKVL---WKILSFIIRS--------SWERFVWGMELFKGGLRKIFGNRHTIHIFRD 132
            +  +++VL   +      + +        +W+  VWG EL   GLR   G+   ++    
Sbjct: 1615 SSLIARVLKSRYFATGVFLEATAGAQPSLTWKSIVWGKELLLKGLRWRIGSGADVNCVSQ 1674

Query: 133  PWIPRPSTFKVVTPPIPSMEDALVADFITSSSQWDVRKLNQFFIGFDVEAIQCLSIS 179
            PWIP PS FK +    P   D  VADFIT S QWDV KL QFF   DV+ I  + +S
Sbjct: 1675 PWIPGPSNFKPLLFLSPD-RDVKVADFITHSRQWDVPKLQQFFTPPDVDRILSIPLS 1730

BLAST of Lcy03g002470 vs. NCBI nr
Match: XP_022131662.1 (uncharacterized protein LOC111004787 [Momordica charantia])

HSP 1 Score: 158.7 bits (400), Expect = 4.9e-35
Identity = 82/192 (42.71%), Postives = 114/192 (59.38%), Query Frame = 0

Query: 2   YAMGQFFSQGG----IFKLCAKFWWGSNGVKSKMHWQRWDNLCKPKEVGRLNFRDLVNFN 61
           YAM  F    G    + ++ A+FWWGS+    K+HW  W+ +C PKE+G LNFRDL  FN
Sbjct: 28  YAMSVFRLPKGFCEEVSQMFARFWWGSSNDTKKLHWMSWERMCLPKELGGLNFRDLEGFN 87

Query: 62  QAMLAKQAWRVLINPNLTVSKVL---WKILSFIIRSS--------WERFVWGMELFKGGL 121
           QA++AKQ WRVL NPN+ VS+VL   +   S +++++        W+ F+WG +L   GL
Sbjct: 88  QALVAKQVWRVLQNPNILVSRVLKAKYFHDSLVLQATHLRNQSYFWKGFIWGRDLLIKGL 147

Query: 122 RKIFGNRHTIHIFRDPWIPRPSTFKVVTPPIPSMEDALVADFITSSSQWDVRKLNQFFIG 179
           R   GN  TI+IF DPWIPRP +F+ +T P     D  VAD I  + QWDV  ++  F  
Sbjct: 148 RSRVGNGSTINIFSDPWIPRPYSFRPITAPF-GPYDVKVADLINPNGQWDVHLISYIFCE 207

BLAST of Lcy03g002470 vs. NCBI nr
Match: XP_030505522.1 (uncharacterized protein LOC115720515 [Cannabis sativa])

HSP 1 Score: 136.3 bits (342), Expect = 2.6e-28
Identity = 76/193 (39.38%), Postives = 106/193 (54.92%), Query Frame = 0

Query: 1   MYAMGQFFSQGG----IFKLCAKFWWGSNGVKSKMHWQRWDNLCKPKEVGRLNFRDLVNF 60
           MY M  F    G    I KL A++WWGS   K K+HW+ W  LC  K  G L FR  V +
Sbjct: 508 MYYMSCFIIPEGTCEEIEKLMARYWWGSFQSKRKIHWRAWQKLCFSKRKGGLGFRRFVQY 567

Query: 61  NQAMLAKQAWRVLINPNLTVSKVL----WKILSFIIRSS-------WERFVWGMELFKGG 120
           NQA+LAKQAWRVLINP   +++VL    +   SF+  +        W   VWG EL   G
Sbjct: 568 NQALLAKQAWRVLINPTSILAQVLKARYFPQQSFLEATESSHPSQIWRGIVWGKELLIKG 627

Query: 121 LRKIFGNRHTIHIFRDPWIPRPSTFKVVTPPIPSMEDALVADFITSSSQWDVRKLNQFFI 179
           LR+  GN     +F+DPWIPRP +F  +T  + ++   +V++ I  S QW++  ++Q F 
Sbjct: 628 LRRRIGNGANTRVFKDPWIPRPPSFLPITKEVGNL--MMVSELIEQSGQWNIDLIHQVFS 687

BLAST of Lcy03g002470 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 136.3 bits (342), Expect = 2.6e-28
Identity = 73/165 (44.24%), Postives = 95/165 (57.58%), Query Frame = 0

Query: 26   GVKSKMHWQRWDNLCKPKEVGRLNFRDLVNFNQAMLAKQAWRVLINPNLTVSKVL----W 85
            G   K+HW +W  +C PKE G LNFRDL  FNQA++AK  WR L +PNL VSKVL    +
Sbjct: 924  GESRKLHWMKWGRMCYPKECGGLNFRDLEGFNQALVAKHVWRFLQHPNLLVSKVLKHKYF 983

Query: 86   KILSFIIRSS-------WERFVWGMELFKGGLRKIFGNRHTIHIFRDPWIPRPSTFKVVT 145
            K  S +  S+       W+ F+WG +L   GLR   GN  TI  F DPW+PRP+TFK + 
Sbjct: 984  KDTSLLQASNNSKSSYFWKGFLWGRDLLVKGLRLRVGNGSTIKAFSDPWLPRPTTFKPLR 1043

Query: 146  PPIPSMEDALVADFITSSSQWDVRKLNQFFIGFDVEAIQCLSISS 180
                ++ D  VA FIT+   WDV  ++  F   D + I  + ISS
Sbjct: 1044 FNNGAL-DTTVASFITADGNWDVTSISHSFCNEDRDLILSMPISS 1087

BLAST of Lcy03g002470 vs. NCBI nr
Match: XP_030509050.1 (uncharacterized protein LOC115723712 [Cannabis sativa])

HSP 1 Score: 135.2 bits (339), Expect = 5.8e-28
Identity = 72/177 (40.68%), Postives = 101/177 (57.06%), Query Frame = 0

Query: 13   IFKLCAKFWWGSNGVKSKMHWQRWDNLCKPKEVGRLNFRDLVNFNQAMLAKQAWRVLINP 72
            I +L ++FWWG +   + +HW+ W  LCK K  G + FR+ V+FNQA+LAKQAWR+L +P
Sbjct: 831  IEQLMSRFWWGKSANGNAIHWKNWKFLCKSKVHGGMGFRNFVHFNQALLAKQAWRILEDP 890

Query: 73   NLTVSKVL---WKILSFIIRS--------SWERFVWGMELFKGGLRKIFGNRHTIHIFRD 132
            +  +++VL   +      + +        +W+  VWG EL   GLR   G+   ++    
Sbjct: 891  SSLIARVLKSRYFATGVFLEATAGAQPSLTWKSIVWGKELLLKGLRWRIGSGADVNCVSQ 950

Query: 133  PWIPRPSTFKVVTPPIPSMEDALVADFITSSSQWDVRKLNQFFIGFDVEAIQCLSIS 179
            PWIP PS FK +    P   D  VADFIT S QWDV KL QFF   DV+ I  + +S
Sbjct: 951  PWIPGPSNFKPLLFLSPD-RDVKVADFITHSRQWDVPKLQQFFTPPDVDRILSIPLS 1006

BLAST of Lcy03g002470 vs. NCBI nr
Match: XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis])

HSP 1 Score: 134.4 bits (337), Expect = 9.8e-28
Identity = 77/191 (40.31%), Postives = 107/191 (56.02%), Query Frame = 0

Query: 2    YAMGQFFSQGG----IFKLCAKFWWGSNGVKSKMHWQRWDNLCKPKEVGRLNFRDLVNFN 61
            YAM  F    G    I +  AKFWWGS G K  +HW++W+ L + K  G L FR+   FN
Sbjct: 838  YAMSVFKLPRGFCDDIQRAIAKFWWGSKGDKRGIHWRKWEKLSQAKIRGGLGFREFSCFN 897

Query: 62   QAMLAKQAWRVLINPNLTVSKVL----WKILSFIIRSS-------WERFVWGMELFKGGL 121
            QA++AKQAWR+L  PN  VS+VL    ++  SF+   +       W   +WG ++ K G+
Sbjct: 898  QALVAKQAWRLLQYPNSLVSRVLQARYFRNSSFLCAKAGANASYIWRSIMWGRQVIKKGM 957

Query: 122  RKIFGNRHTIHIFRDPWIPRPSTFKVVTPPIPSMEDALVADFITSSSQWDVRKLNQFFIG 178
            R   GN   I IF D W+PRP TF+ +  P+     ++VAD I + +QWD  KL Q F+ 
Sbjct: 958  RWRIGNGKKIAIFSDNWLPRPETFRPIF-PLSLPVSSVVADLIKADNQWDEIKLRQHFL- 1017

BLAST of Lcy03g002470 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 3.9e-14
Identity = 49/157 (31.21%), Postives = 73/157 (46.50%), Query Frame = 0

Query: 13  IFKLCAKFWWGSNGVKSKMHWQRWDNLCKPKEVGRLNFRDLVNFNQAMLAKQAWRVLINP 72
           I  + A FWW +      MHW+ WD+L   K  G + F+D+  FN A+L KQ WR+L  P
Sbjct: 21  IISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDIEAFNLALLGKQMWRMLSRP 80

Query: 73  NLTVSKVLWKILSF-------IIRSSWERFVW-----GMELFKGGLRKIFGNRHTIHIFR 132
              ++KV +K   F           S   FVW       E+ + G R + GN   I I+R
Sbjct: 81  ESLMAKV-FKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEILRQGARAVVGNGEDIIIWR 140

Query: 133 DPWI-PRPSTFKVVTPPIPSMEDALVADFITSSSQWD 157
             W+  +P++  +    +P  E A V+  +  S   D
Sbjct: 141 HKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLID 176

BLAST of Lcy03g002470 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 71.6 bits (174), Expect = 7.3e-13
Identity = 44/118 (37.29%), Postives = 60/118 (50.85%), Query Frame = 0

Query: 19  KFWWGSNGVKSKMHWQRWDNLCKPKE-VGRLNFRDLVNFNQAMLAKQAWRVLINPNLTVS 78
           +FWW S   K K+ W  W  LCK KE  G L FRDL  FNQA+LAKQ++R++  P+  +S
Sbjct: 27  EFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTLLS 86

Query: 79  KVL---------WKILSFIIRSS--WERFVWGMELFKGGLRKIFGNRHTIHIFRDPWI 125
           ++L             S   R S  W   + G EL   GL +  G+     ++ D WI
Sbjct: 87  RLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWI 144

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P932951.0e-1137.29Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A6J1BRN02.4e-3542.71uncharacterized protein LOC111004787 OS=Momordica charantia OX=3673 GN=LOC111004... [more]
A0A803NXV21.0e-3039.39Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803NHI32.3e-3040.11Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A6J1DX301.3e-2844.24uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A803Q6Z22.8e-2840.68Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022131662.14.9e-3542.71uncharacterized protein LOC111004787 [Momordica charantia][more]
XP_030505522.12.6e-2839.38uncharacterized protein LOC115720515 [Cannabis sativa][more]
XP_022158377.12.6e-2844.24uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_030509050.15.8e-2840.68uncharacterized protein LOC115723712 [Cannabis sativa][more]
XP_024950112.19.8e-2840.31uncharacterized protein LOC112496847 [Citrus sinensis][more]
Match NameE-valueIdentityDescription
AT4G29090.13.9e-1431.21Ribonuclease H-like superfamily protein [more]
ATMG00310.17.3e-1337.29RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 18..180
NoneNo IPR availablePANTHERPTHR33116:SF41SUBFAMILY NOT NAMEDcoord: 18..180

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy03g002470.1Lcy03g002470.1mRNA