Lcy03g002310 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy03g002310
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	metal transporter Nramp6-like
Location	Chr03: 8276388 .. 8280306 (+)
RNA-Seq Expression	Lcy03g002310
Synteny	Lcy03g002310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTCCTCATTAATGTGTTAGTCATTTCTGTTAGTGGTGCAGTTTGCAATTCCCCAGATCTAAATAAGGAAGACCAAATGAGCTACAGTGACTTGGACTTGAATAAAGCTTCATTTTTATTGAGAGTATGTGTGATCTAGCAACTTTTGCCTATATCCTTCTTGTTTACCTCATGGGATTTGGTTCCTCACCAATGGTGTGCTAGTTTCATACAGAGGTATTCTATACTTTTTTCAGAATGTATTGGGTAAATGGAGTTCAAAACTTTTTGCCATTGCTTTGTTAGCATCTGGTCAGAGTTCTACCATAACAGGAACCTATGCATTACAGTATGTTATGCAGGTACTATACTGGTCCTCTTTCTATGTTGAAGCTCCCTTTTCTTTACATTTCGAACTAATGCTCTCATCTATTTATATTATTGGTATTGAGTAAATCAGAAATAGCATGGTTATGAAATTTTCTGAATGTTCATGGTCATAAACAGGACCTTCTTGTGGGTACTCCATAATGCTTTGATTTCAAGTAGTTTCTTTTGAATTTTCTTCATTTTTGACACATTCCTGTTTGTACCACATTTATTTTGTAGGGGTTTCTTGATTTGAAACTGACGCCATGGATCAAAAACTTTTTAACCCGAAGCTTAGCAAATGTTCCTAGTTTGATTGTTGCAATCATTGGTGGGTCTTCTGGGGCTGGGAAGTTGATTATTATTGTGTCGGTAAGGATATATACTTCCCCATGAATGTGATTGAGGTTGAACTTCCAGTCAGTGTATGCATGGCCAATACCTCCGTCTTTGTTCCATGCATGTTATTTAACGAAGTCAACGAGGTAGAAGTTGATAGAAAATGATAGTGAAATTCACTTTGAAACTTGTATCATCGTTTATCGAAGTGGTATACCGATCAACAACCCTAGTCATTGAATAGATTTCTTATTTCATATGTTTAGGATTTAATGTTGTTCCACCATCTTTTTCACAGATTTCACTGAGGGCCCAAGTTTTTTGGCATAGTTCAATTGTAGTGTGCTGATCAATTACTGCTTTAAATTGAAGGCAAAGCGCTTTGACTTCCTGCAATCTTCCCTTTTGGCAGATGATTTTGTCATTTGAACTCCCTTTTGCTCTCATTTCCCTTCTGAAGTTTACAAGCAGCAAGACCAAGATGGGAACGCATGTCAACTCCACTGCAGTAATTTTGACTGATCCAAGTAACTTCTTTATAACATTTGCTCTTTCCTTTTGTTAGATGATCCCAAACAAAGCTTGAGCTAAACATCATTCAAATCCATACAACAAAAAAGTTTGGATTAAAAATTGTACTCCCTAACCTCCACCAACATCATGAAGAAAATAACACTTAATTATTTGTTGAAGTAGTTCTGTCTTGAAGGGTGCACATTAGAGTTGAATCTGAAGCCTTATATGAATAATTTTTAATTAATCTTCAAATAAGCATTCATAACATTTTTATCATACTAATCCTTATAACCAAAGAAAGGCTGGATTATTCTGATTGAAATGCATTCTCCTTTTAGTTTTATCTTCAAGGATGAACTGATGAATGACATGAAATGAGTCTCACACTCCTGACAAAACCAACCTGATCATCATAGTTTTCTGATCATTTTGGTCAATTTTCATTATATATTTTTGAAATGCAGATTACGATACTGACATGGATCCATCTACAACTAAATATCTTGAGGTCATTGTAAGTAGGTATTTCCTTATACAATCTTGGTGAGGAGTAAATCTTTAGGTGACTTCCATACTTGATTGGTGAAGAGGCATAGCAAGGACATCTTCTGTTATGGTCCCAAGTAACAAAGAAGTCAACAACCCATCTTTGTTTATCCAAATGGGATAATGAGTACTCTCAGCTTCATTTGCATCTGTGACACTAGTTTCTTCTACAAGTTTGTTATTCATGAGGTGTTTTTCCAACCCCAAATTCCCTTATTAAAGGAATGACTAGAGATTTTCACAGTAGGTAATTGAAAAGAAAAAAAAATTGGATAAAGGACTCAACTAAAAGAAAAAAAAATCACAAAATTGGAATGCACCTAAAATCTTTTTTATATTAATATCATAACTTGGAATGTGATTTTCTTTTGAGTTGTTTTTCTTCCATTACTACTTTTTTCAGTTTGTTCAATTTCCATTTTTGTGCCAAACTTCATTACCAGGCTTTGACAAGTGAACGTGTCACTGAAGAACACTATGCCTTAGTAATGTCAGTTGTGAGTTTCTTTGCCTGCAAACTCTGAGTTCCTTCTCATGGCTGTTAGCCTTATAATCTCACTATTTCATTGAGAAAACAATCATGACTTGATTTCAGATAGGTACAACTTGGGGAACAGGATTCGTTATTGTCCCTGCTGTGGGAGGCTTTTTGGCTCAGGTACTTTTCACTTCATTTGTCTCTTGTTTCTAAAGTTTTTGTTTAGTCCCTAAGTTCTTATTGTCACATTGTATTGAAATTGATATTTTCCTCTAGGTATGAATCCTTAAGGTTGTGTTGCTCCTCTAAAATCTCTGTGTTTTTCCTTCCATTTTTGGGTTGCTTTCTCGATTAATCTCTCCTAGATCTAGTTTCTTCTTCCCTTTTTATTTCCTTTGGACATGGTAGTTGTTGCTTATTTTAGTTGAGTTTTAGTTGTGAATACTCCTTTTAATTGATTAATGATATTGTGAGGCTTGACTCGCTTGTTCTCTGGAGTTCTGTTGTGTTGTAGCATGATGGTATTGTTGAAAATGTTATGTTTTTGTTCTAGCAGGTCTAGAAACATTTTGGGTTAGTCCTATGTATGCAGTTATGTTGTCGAAATTTTCGGAGCGCTCGGTTAGTCTTAATTTGTTGTATTGACTCTCATAAGTAACCTCTTTCTCTTAATTTGTCCATTTTCATAGGTAGACTTATTTTGATCTTACAATGGAAAGCACACAAAAGGGACCCTTCAAACTAGGTATTGATGATTTCTCTAATGTTATAAAATCATTATGAAACTTATTGGATTTATGTGTTTGGTTGTATGTTGATATTGTGTCTTACGTTTAATTATTAACTTGTATGTGTTTAGAAGTTTAGGTAGCCATAATTAGGTTTAGAAAGGTTTTTCCTCTAGTTTCATAGTTTACTTGGTTGTATGGCTATCCTGCAGTTACGGTAGCCATATAAATAGATGCGTTTGTGTGATTTGAAGTGTGTTTGGATGAATTTATGGGATGTTGACTAAGTGAGTGAATTAGGCCGTCTTTTGGCTTCTAAAGGTTAGTTTGGGTGAGGTTGTGTGATTTGAAATGTGTTTGGATGAGTTTGGAGGATTTGAATTTTGTTTGGGTGGCTTGGGTACGTGTTTGACTTTTAAGGGTTAGTTAAGGTGAGTTTATAGGATTTGAAATGTGTTTGAGTGAGTTTATTGAATGTGGATTGAGTATGAGTAAATTAGGAAATTTTGGATGAGTTTGTGGGATTTAAAATTTGTGTGGGTGAGTTAGGCACCTGTTTAACTTTTAAGGGTGAATTTAGGTGGGATTGTAAGGTTTGAAATGTCTTTGGGTGAGTTTGGGGTGAATTAGACACATTGGAGCAAGTTTGTGAAATTTGAAGTGTGTTTAGGTGAATTTGTGGGATTTGGGAGTGTGTTTGGATGGATTGTAAGATTCACACAAGATCAAATGTATTGAGTTGGGAATATTGTCACCATTTTAAAGGTATATATACCTTTAAAATTGTTCAAACGAGTTGTGAGTTATATAACTCATACACATTGTTAAAATGAATATTATTGTTTTTATCTTGATGTAAGAAATATTGCATTCAACTCTAAAATGAATATTGTTTGGTTGGTTATGTCTTGCAGGAACTCAACGAAGTCAAGAAAAACCATATTATGGATAGCAATTGA

mRNA sequence

ATGGCTTTCCTCATTAATGTGTTAGTCATTTCTGTTAGTGGTGCAGTTTGCAATTCCCCAGATCTAAATAAGGAAGACCAAATGAGCTACAGTGACTTGGACTTGAATAAAGCTTCATTTTTATTGAGAAATGTATTGGGTAAATGGAGTTCAAAACTTTTTGCCATTGCTTTGTTAGCATCTGGTCAGAGTTCTACCATAACAGGAACCTATGCATTACAGTATGTTATGCAGGGGTTTCTTGATTTGAAACTGACGCCATGGATCAAAAACTTTTTAACCCGAAGCTTAGCAAATGTTCCTAGTTTGATTGTTGCAATCATTGGTGGGTCTTCTGGGGCTGGGAAGTTGATTATTATTGTGTCGATGATTTTGTCATTTGAACTCCCTTTTGCTCTCATTTCCCTTCTGAAGTTTACAAGCAGCAAGACCAAGATGGGAACGCATGTCAACTCCACTGCAGTAATTTTGACTGATCCAAATTACGATACTGACATGGATCCATCTACAACTAAATATCTTGAGGTCATTGCTTTGACAAGTGAACGTGTCACTGAAGAACACTATGCCTTAGTAATGTCAGTTATAGGTACAACTTGGGGAACAGGATTCGTTATTGTCCCTGCTGTGGGAGGCTTTTTGGCTCAGGAACTCAACGAAGTCAAGAAAAACCATATTATGGATAGCAATTGA

Coding sequence (CDS)

ATGGCTTTCCTCATTAATGTGTTAGTCATTTCTGTTAGTGGTGCAGTTTGCAATTCCCCAGATCTAAATAAGGAAGACCAAATGAGCTACAGTGACTTGGACTTGAATAAAGCTTCATTTTTATTGAGAAATGTATTGGGTAAATGGAGTTCAAAACTTTTTGCCATTGCTTTGTTAGCATCTGGTCAGAGTTCTACCATAACAGGAACCTATGCATTACAGTATGTTATGCAGGGGTTTCTTGATTTGAAACTGACGCCATGGATCAAAAACTTTTTAACCCGAAGCTTAGCAAATGTTCCTAGTTTGATTGTTGCAATCATTGGTGGGTCTTCTGGGGCTGGGAAGTTGATTATTATTGTGTCGATGATTTTGTCATTTGAACTCCCTTTTGCTCTCATTTCCCTTCTGAAGTTTACAAGCAGCAAGACCAAGATGGGAACGCATGTCAACTCCACTGCAGTAATTTTGACTGATCCAAATTACGATACTGACATGGATCCATCTACAACTAAATATCTTGAGGTCATTGCTTTGACAAGTGAACGTGTCACTGAAGAACACTATGCCTTAGTAATGTCAGTTATAGGTACAACTTGGGGAACAGGATTCGTTATTGTCCCTGCTGTGGGAGGCTTTTTGGCTCAGGAACTCAACGAAGTCAAGAAAAACCATATTATGGATAGCAATTGA

Protein sequence

MAFLINVLVISVSGAVCNSPDLNKEDQMSYSDLDLNKASFLLRNVLGKWSSKLFAIALLASGQSSTITGTYALQYVMQGFLDLKLTPWIKNFLTRSLANVPSLIVAIIGGSSGAGKLIIIVSMILSFELPFALISLLKFTSSKTKMGTHVNSTAVILTDPNYDTDMDPSTTKYLEVIALTSERVTEEHYALVMSVIGTTWGTGFVIVPAVGGFLAQELNEVKKNHIMDSN

Homology

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BLAST of Lcy03g002310 vs. ExPASy Swiss-Prot
Match: Q9S9N8 (Metal transporter Nramp6 OS=Arabidopsis thaliana OX=3702 GN=NRAMP6 PE=2 SV=2)

HSP 1 Score: 238.8 bits (608), Expect = 6.1e-62
Identity = 126/155 (81.29%), Postives = 140/155 (90.32%), Query Frame = 0


Query: 1   MAFLINVLVISVSGAVCNSPDLNKEDQMSYSDLDLNKASFLLRNVLGKWSSKLFAIALLA 60
           +AFLINV VISVSGAVCN+ DL+ ED+ S  DLDLNKASFLLRNV+GKWSSKLFAIALLA
Sbjct: 269 VAFLINVSVISVSGAVCNASDLSPEDRASCQDLDLNKASFLLRNVVGKWSSKLFAIALLA 328

Query: 61  SGQSSTITGTYALQYVMQGFLDLKLTPWIKNFLTRSLANVPSLIVAIIGGSSGAGKLIII 120
           SGQSSTITGTYA QYVMQGFLDL+L PW++NFLTR LA +PSLIVA+IGGS+GAGKLIII
Sbjct: 329 SGQSSTITGTYAGQYVMQGFLDLRLEPWLRNFLTRCLAIIPSLIVALIGGSAGAGKLIII 388

Query: 121 VSMILSFELPFALISLLKFTSSKTKMGTHVNSTAV 156
            SMILSFELPFAL+ LLKFTSSKTKMG+H NS  +
Sbjct: 389 ASMILSFELPFALVPLLKFTSSKTKMGSHANSLVI 423

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BLAST of Lcy03g002310 vs. ExPASy Swiss-Prot
Match: Q9SAH8 (Metal transporter Nramp1 OS=Arabidopsis thaliana OX=3702 GN=NRAMP1 PE=1 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.1e-61
Identity = 124/155 (80.00%), Postives = 140/155 (90.32%), Query Frame = 0


Query: 1   MAFLINVLVISVSGAVCNSPDLNKEDQMSYSDLDLNKASFLLRNVLGKWSSKLFAIALLA 60
           +AFLINV VISVSGAVCN+P+L+ ED+ +  DLDLNKASFLLRNV+GKWSSKLFAIALLA
Sbjct: 277 VAFLINVSVISVSGAVCNAPNLSPEDRANCEDLDLNKASFLLRNVVGKWSSKLFAIALLA 336

Query: 61  SGQSSTITGTYALQYVMQGFLDLKLTPWIKNFLTRSLANVPSLIVAIIGGSSGAGKLIII 120
           SGQSSTITGTYA QYVMQGFLDL+L PW++N LTR LA +PSLIVA+IGGS+GAGKLIII
Sbjct: 337 SGQSSTITGTYAGQYVMQGFLDLRLEPWLRNLLTRCLAIIPSLIVALIGGSAGAGKLIII 396

Query: 121 VSMILSFELPFALISLLKFTSSKTKMGTHVNSTAV 156
            SMILSFELPFAL+ LLKFTS KTKMG+HVN  A+
Sbjct: 397 ASMILSFELPFALVPLLKFTSCKTKMGSHVNPMAI 431

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BLAST of Lcy03g002310 vs. ExPASy Swiss-Prot
Match: Q653V6 (Metal transporter Nramp3 OS=Oryza sativa subsp. japonica OX=39947 GN=NRAMP3 PE=2 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.1e-60
Identity = 123/155 (79.35%), Postives = 140/155 (90.32%), Query Frame = 0


Query: 1   MAFLINVLVISVSGAVCNSPDLNKEDQMSYSDLDLNKASFLLRNVLGKWSSKLFAIALLA 60
           +AFLIN+ +ISVSGAVC S +L+ EDQM+ SDLDLNKASFLL+NVLG WSSKLFA+ALLA
Sbjct: 281 IAFLINISIISVSGAVCGSDNLSPEDQMNCSDLDLNKASFLLKNVLGNWSSKLFAVALLA 340

Query: 61  SGQSSTITGTYALQYVMQGFLDLKLTPWIKNFLTRSLANVPSLIVAIIGGSSGAGKLIII 120
           SGQSSTITGTYA QYVMQGFLDL++TPWI+N LTRSLA +PSLIV+IIGGSS AG+LIII
Sbjct: 341 SGQSSTITGTYAGQYVMQGFLDLRMTPWIRNLLTRSLAILPSLIVSIIGGSSAAGQLIII 400

Query: 121 VSMILSFELPFALISLLKFTSSKTKMGTHVNSTAV 156
            SMILSFELPFAL+ LLKFTSS+TKMG H NS A+
Sbjct: 401 ASMILSFELPFALVPLLKFTSSRTKMGQHTNSKAI 435

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BLAST of Lcy03g002310 vs. ExPASy Swiss-Prot
Match: Q0D7E4 (Metal transporter Nramp1 OS=Oryza sativa subsp. japonica OX=39947 GN=NRAMP1 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.2e-49
Identity = 103/156 (66.03%), Postives = 130/156 (83.33%), Query Frame = 0


Query: 1   MAFLINVLVISVSGAVCNSPDLNKEDQMSYSDLDLNKASFLLRNVLGKWSSKLFAIALLA 60
           +A L+N+ +ISVSG VCN+ +L+ ED +  SDL L+ +SFLLRNVLGK S+ ++ +ALLA
Sbjct: 266 VALLVNIAIISVSGTVCNATNLSPEDAVKCSDLTLDSSSFLLRNVLGKSSATVYGVALLA 325

Query: 61  SGQSSTITGTYALQYVMQGFLDLKLTPWIKNFLTRSLANVPSLIVAIIGGSSGAGKLIII 120
           SGQSSTITGTYA QYVMQGFLD+K+  W++N +TRS+A VPSLIV+IIGGSSGAG+LI+I
Sbjct: 326 SGQSSTITGTYAGQYVMQGFLDIKMKQWLRNLMTRSIAIVPSLIVSIIGGSSGAGRLIVI 385

Query: 121 VSMILSFELPFALISLLKFTSSKTKMGTHVNSTAVI 157
            SMILSFELPFALI LLKF+SS  KMG + NS  ++
Sbjct: 386 ASMILSFELPFALIPLLKFSSSSNKMGENKNSIYIV 421

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BLAST of Lcy03g002310 vs. ExPASy Swiss-Prot
Match: Q8H4H5 (Metal transporter Nramp5 OS=Oryza sativa subsp. japonica OX=39947 GN=NRAMP5 PE=2 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.5e-47
Identity = 99/157 (63.06%), Postives = 130/157 (82.80%), Query Frame = 0


Query: 1   MAFLINVLVISVSGAVCNSPDLNKEDQMSYSDLDLNKASFLLRNVLGKWSSKLFAIALLA 60
           +A LIN+ V+SVSG  C+S +L++ED    ++L L+ +SFLL+NVLGK S+ ++ +ALLA
Sbjct: 275 VALLINIAVVSVSGTACSSANLSQEDADKCANLSLDTSSFLLKNVLGKSSAIVYGVALLA 334

Query: 61  SGQSSTITGTYALQYVMQGFLDLKLTPWIKNFLTRSLANVPSLIVAIIGGSSGAGKLIII 120
           SGQSSTITGTYA QY+MQGFLD+++  W++N +TR++A  PSLIV+IIGGS GAG+LIII
Sbjct: 335 SGQSSTITGTYAGQYIMQGFLDIRMRKWLRNLMTRTIAIAPSLIVSIIGGSRGAGRLIII 394

Query: 121 VSMILSFELPFALISLLKFTSSKTKMGTHVNSTAVIL 158
            SMILSFELPFALI LLKF+SSK+KMG H NS  +I+
Sbjct: 395 ASMILSFELPFALIPLLKFSSSKSKMGPHKNSIYIIV 431

[Close]

BLAST of Lcy03g002310 vs. ExPASy TrEMBL
Match: A0A6J1J3T2 (metal transporter Nramp6-like OS=Cucurbita maxima OX=3661 GN=LOC111481537 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 3.8e-67
Identity = 141/155 (90.97%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MAFLINVLVISVSGAVCNSPDLNKEDQMSYSDLDLNKASFLLRNVLGKWSSKLFAIALLA 60
           +AFLINV VISVSGAVCNSPDLNKEDQMS +DLDLNKASFLLRNVLGKWSSKLFAIALLA
Sbjct: 278 VAFLINVSVISVSGAVCNSPDLNKEDQMSCNDLDLNKASFLLRNVLGKWSSKLFAIALLA 337

Query: 61  SGQSSTITGTYALQYVMQGFLDLKLTPWIKNFLTRSLANVPSLIVAIIGGSSGAGKLIII 120
           SGQSSTITGTYA QYVMQGFLDLKLTPW++NFLTR LA VPSLIVAIIGGSSGAGKLIII
Sbjct: 338 SGQSSTITGTYAGQYVMQGFLDLKLTPWVRNFLTRCLAIVPSLIVAIIGGSSGAGKLIII 397

Query: 121 VSMILSFELPFALISLLKFTSSKTKMGTHVNSTAV 156
            SMILSFELPFAL+ LLKFTSS+TKMGTHVNSTA+
Sbjct: 398 ASMILSFELPFALVPLLKFTSSRTKMGTHVNSTAI 432

[Close]

BLAST of Lcy03g002310 vs. ExPASy TrEMBL
Match: A0A6J1F4P3 (metal transporter Nramp6-like OS=Cucurbita moschata OX=3662 GN=LOC111442317 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 3.8e-67
Identity = 141/155 (90.97%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MAFLINVLVISVSGAVCNSPDLNKEDQMSYSDLDLNKASFLLRNVLGKWSSKLFAIALLA 60
           +AFLINV VISVSGAVCNSPDLNKEDQMS +DLDLNKASFLLRNVLGKWSSKLFAIALLA
Sbjct: 278 VAFLINVSVISVSGAVCNSPDLNKEDQMSCNDLDLNKASFLLRNVLGKWSSKLFAIALLA 337

Query: 61  SGQSSTITGTYALQYVMQGFLDLKLTPWIKNFLTRSLANVPSLIVAIIGGSSGAGKLIII 120
           SGQSSTITGTYA QYVMQGFLDLKLTPW++NFLTR LA VPSLIVAIIGGSSGAGKLIII
Sbjct: 338 SGQSSTITGTYAGQYVMQGFLDLKLTPWVRNFLTRCLAIVPSLIVAIIGGSSGAGKLIII 397

Query: 121 VSMILSFELPFALISLLKFTSSKTKMGTHVNSTAV 156
            SMILSFELPFAL+ LLKFTSS+TKMGTHVNSTA+
Sbjct: 398 ASMILSFELPFALVPLLKFTSSRTKMGTHVNSTAI 432

[Close]

BLAST of Lcy03g002310 vs. ExPASy TrEMBL
Match: A0A5A7TXN6 (Metal transporter Nramp6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold688G00430 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 6.5e-67
Identity = 142/155 (91.61%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 1   MAFLINVLVISVSGAVCNSPDLNKEDQMSYSDLDLNKASFLLRNVLGKWSSKLFAIALLA 60
           +AFLINV VISVSGAVCNSPDLNKEDQMS +DLDLNKASFLLRNVLGKWSSKLFAIALLA
Sbjct: 278 VAFLINVSVISVSGAVCNSPDLNKEDQMSCNDLDLNKASFLLRNVLGKWSSKLFAIALLA 337

Query: 61  SGQSSTITGTYALQYVMQGFLDLKLTPWIKNFLTRSLANVPSLIVAIIGGSSGAGKLIII 120
           SGQSSTITGTYA QYVMQGFLDLKLTPWI+NFLTRSLA VPSLIVAIIGGSSGAGKLIII
Sbjct: 338 SGQSSTITGTYAGQYVMQGFLDLKLTPWIRNFLTRSLAIVPSLIVAIIGGSSGAGKLIII 397

Query: 121 VSMILSFELPFALISLLKFTSSKTKMGTHVNSTAV 156
            SMILSFELPFAL+ LLKFTSSK KMG HVNSTA+
Sbjct: 398 ASMILSFELPFALVPLLKFTSSKAKMGPHVNSTAI 432

[Close]

BLAST of Lcy03g002310 vs. ExPASy TrEMBL
Match: A0A5A7T2K9 (Metal transporter Nramp6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1593G00280 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.4e-66
Identity = 141/155 (90.97%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 1   MAFLINVLVISVSGAVCNSPDLNKEDQMSYSDLDLNKASFLLRNVLGKWSSKLFAIALLA 60
           +AFLINV VISVSGAVCN+PDLNKEDQMS +DLDLNKASFLLRNVLGKWSSKLFAIALLA
Sbjct: 278 VAFLINVSVISVSGAVCNAPDLNKEDQMSCNDLDLNKASFLLRNVLGKWSSKLFAIALLA 337

Query: 61  SGQSSTITGTYALQYVMQGFLDLKLTPWIKNFLTRSLANVPSLIVAIIGGSSGAGKLIII 120
           SGQSSTITGTYA QYVMQGFLDLKLTPWI+NFLTRSLA VPSLIVAIIGGSSGAGKLIII
Sbjct: 338 SGQSSTITGTYAGQYVMQGFLDLKLTPWIRNFLTRSLAIVPSLIVAIIGGSSGAGKLIII 397

Query: 121 VSMILSFELPFALISLLKFTSSKTKMGTHVNSTAV 156
            SMILSFELPFAL+ LLKFTSSK KMG HVNSTA+
Sbjct: 398 ASMILSFELPFALVPLLKFTSSKAKMGPHVNSTAI 432

[Close]

BLAST of Lcy03g002310 vs. ExPASy TrEMBL
Match: A0A5D3DUP0 (Metal transporter Nramp6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold901G00300 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.4e-66
Identity = 141/155 (90.97%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 1   MAFLINVLVISVSGAVCNSPDLNKEDQMSYSDLDLNKASFLLRNVLGKWSSKLFAIALLA 60
           +AFLINV VISVSGAVCN+PDLNKEDQMS +DLDLNKASFLLRNVLGKWSSKLFAIALLA
Sbjct: 302 VAFLINVSVISVSGAVCNAPDLNKEDQMSCNDLDLNKASFLLRNVLGKWSSKLFAIALLA 361

Query: 61  SGQSSTITGTYALQYVMQGFLDLKLTPWIKNFLTRSLANVPSLIVAIIGGSSGAGKLIII 120
           SGQSSTITGTYA QYVMQGFLDLKLTPWI+NFLTRSLA VPSLIVAIIGGSSGAGKLIII
Sbjct: 362 SGQSSTITGTYAGQYVMQGFLDLKLTPWIRNFLTRSLAIVPSLIVAIIGGSSGAGKLIII 421

Query: 121 VSMILSFELPFALISLLKFTSSKTKMGTHVNSTAV 156
            SMILSFELPFAL+ LLKFTSSK KMG HVNSTA+
Sbjct: 422 ASMILSFELPFALVPLLKFTSSKAKMGPHVNSTAI 456

[Close]

BLAST of Lcy03g002310 vs. NCBI nr
Match: XP_038905496.1 (metal transporter Nramp6-like [Benincasa hispida] >XP_038905497.1 metal transporter Nramp6-like [Benincasa hispida])

HSP 1 Score: 265.8 bits (678), Expect = 3.5e-67
Identity = 143/155 (92.26%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MAFLINVLVISVSGAVCNSPDLNKEDQMSYSDLDLNKASFLLRNVLGKWSSKLFAIALLA 60
           +AFLINV VISVSGAVCNSPDLNKEDQMS +DLDLNKASFLLRNVLGKWSSKLFAIALLA
Sbjct: 278 VAFLINVSVISVSGAVCNSPDLNKEDQMSCNDLDLNKASFLLRNVLGKWSSKLFAIALLA 337

Query: 61  SGQSSTITGTYALQYVMQGFLDLKLTPWIKNFLTRSLANVPSLIVAIIGGSSGAGKLIII 120
           SGQSSTITGTYA QYVMQGFLDLKLTPWI+NFLTRSLA VPSLIVAIIGGSSGAGKLIII
Sbjct: 338 SGQSSTITGTYAGQYVMQGFLDLKLTPWIRNFLTRSLAIVPSLIVAIIGGSSGAGKLIII 397

Query: 121 VSMILSFELPFALISLLKFTSSKTKMGTHVNSTAV 156
            SMILSFELPFAL+ LLKFTSSKTKMG HVNSTA+
Sbjct: 398 ASMILSFELPFALVPLLKFTSSKTKMGPHVNSTAI 432

[Close]

BLAST of Lcy03g002310 vs. NCBI nr
Match: XP_022935446.1 (metal transporter Nramp6-like [Cucurbita moschata])

HSP 1 Score: 264.6 bits (675), Expect = 7.9e-67
Identity = 141/155 (90.97%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MAFLINVLVISVSGAVCNSPDLNKEDQMSYSDLDLNKASFLLRNVLGKWSSKLFAIALLA 60
           +AFLINV VISVSGAVCNSPDLNKEDQMS +DLDLNKASFLLRNVLGKWSSKLFAIALLA
Sbjct: 278 VAFLINVSVISVSGAVCNSPDLNKEDQMSCNDLDLNKASFLLRNVLGKWSSKLFAIALLA 337

Query: 61  SGQSSTITGTYALQYVMQGFLDLKLTPWIKNFLTRSLANVPSLIVAIIGGSSGAGKLIII 120
           SGQSSTITGTYA QYVMQGFLDLKLTPW++NFLTR LA VPSLIVAIIGGSSGAGKLIII
Sbjct: 338 SGQSSTITGTYAGQYVMQGFLDLKLTPWVRNFLTRCLAIVPSLIVAIIGGSSGAGKLIII 397

Query: 121 VSMILSFELPFALISLLKFTSSKTKMGTHVNSTAV 156
            SMILSFELPFAL+ LLKFTSS+TKMGTHVNSTA+
Sbjct: 398 ASMILSFELPFALVPLLKFTSSRTKMGTHVNSTAI 432

[Close]

BLAST of Lcy03g002310 vs. NCBI nr
Match: KAG7018125.1 (Metal transporter Nramp6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 264.6 bits (675), Expect = 7.9e-67
Identity = 141/155 (90.97%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MAFLINVLVISVSGAVCNSPDLNKEDQMSYSDLDLNKASFLLRNVLGKWSSKLFAIALLA 60
           +AFLINV VISVSGAVCNSPDLNKEDQMS +DLDLNKASFLLRNVLGKWSSKLFAIALLA
Sbjct: 298 VAFLINVSVISVSGAVCNSPDLNKEDQMSCNDLDLNKASFLLRNVLGKWSSKLFAIALLA 357

Query: 61  SGQSSTITGTYALQYVMQGFLDLKLTPWIKNFLTRSLANVPSLIVAIIGGSSGAGKLIII 120
           SGQSSTITGTYA QYVMQGFLDLKLTPW++NFLTR LA VPSLIVAIIGGSSGAGKLIII
Sbjct: 358 SGQSSTITGTYAGQYVMQGFLDLKLTPWVRNFLTRCLAIVPSLIVAIIGGSSGAGKLIII 417

Query: 121 VSMILSFELPFALISLLKFTSSKTKMGTHVNSTAV 156
            SMILSFELPFAL+ LLKFTSS+TKMGTHVNSTA+
Sbjct: 418 ASMILSFELPFALVPLLKFTSSRTKMGTHVNSTAI 452

[Close]

BLAST of Lcy03g002310 vs. NCBI nr
Match: KAG6581627.1 (Metal transporter Nramp1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 264.6 bits (675), Expect = 7.9e-67
Identity = 141/155 (90.97%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MAFLINVLVISVSGAVCNSPDLNKEDQMSYSDLDLNKASFLLRNVLGKWSSKLFAIALLA 60
           +AFLINV VISVSGAVCNSPDLNKEDQMS +DLDLNKASFLLRNVLGKWSSKLFAIALLA
Sbjct: 278 VAFLINVSVISVSGAVCNSPDLNKEDQMSCNDLDLNKASFLLRNVLGKWSSKLFAIALLA 337

Query: 61  SGQSSTITGTYALQYVMQGFLDLKLTPWIKNFLTRSLANVPSLIVAIIGGSSGAGKLIII 120
           SGQSSTITGTYA QYVMQGFLDLKLTPW++NFLTR LA VPSLIVAIIGGSSGAGKLIII
Sbjct: 338 SGQSSTITGTYAGQYVMQGFLDLKLTPWVRNFLTRCLAIVPSLIVAIIGGSSGAGKLIII 397

Query: 121 VSMILSFELPFALISLLKFTSSKTKMGTHVNSTAV 156
            SMILSFELPFAL+ LLKFTSS+TKMGTHVNSTA+
Sbjct: 398 ASMILSFELPFALVPLLKFTSSRTKMGTHVNSTAI 432

[Close]

BLAST of Lcy03g002310 vs. NCBI nr
Match: XP_022982780.1 (metal transporter Nramp6-like [Cucurbita maxima])

HSP 1 Score: 264.6 bits (675), Expect = 7.9e-67
Identity = 141/155 (90.97%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MAFLINVLVISVSGAVCNSPDLNKEDQMSYSDLDLNKASFLLRNVLGKWSSKLFAIALLA 60
           +AFLINV VISVSGAVCNSPDLNKEDQMS +DLDLNKASFLLRNVLGKWSSKLFAIALLA
Sbjct: 278 VAFLINVSVISVSGAVCNSPDLNKEDQMSCNDLDLNKASFLLRNVLGKWSSKLFAIALLA 337

Query: 61  SGQSSTITGTYALQYVMQGFLDLKLTPWIKNFLTRSLANVPSLIVAIIGGSSGAGKLIII 120
           SGQSSTITGTYA QYVMQGFLDLKLTPW++NFLTR LA VPSLIVAIIGGSSGAGKLIII
Sbjct: 338 SGQSSTITGTYAGQYVMQGFLDLKLTPWVRNFLTRCLAIVPSLIVAIIGGSSGAGKLIII 397

Query: 121 VSMILSFELPFALISLLKFTSSKTKMGTHVNSTAV 156
            SMILSFELPFAL+ LLKFTSS+TKMGTHVNSTA+
Sbjct: 398 ASMILSFELPFALVPLLKFTSSRTKMGTHVNSTAI 432

[Close]

BLAST of Lcy03g002310 vs. TAIR 10
Match: AT1G15960.1 (NRAMP metal ion transporter 6 )

HSP 1 Score: 238.8 bits (608), Expect = 4.3e-63
Identity = 126/155 (81.29%), Postives = 140/155 (90.32%), Query Frame = 0


Query: 1   MAFLINVLVISVSGAVCNSPDLNKEDQMSYSDLDLNKASFLLRNVLGKWSSKLFAIALLA 60
           +AFLINV VISVSGAVCN+ DL+ ED+ S  DLDLNKASFLLRNV+GKWSSKLFAIALLA
Sbjct: 269 VAFLINVSVISVSGAVCNASDLSPEDRASCQDLDLNKASFLLRNVVGKWSSKLFAIALLA 328

Query: 61  SGQSSTITGTYALQYVMQGFLDLKLTPWIKNFLTRSLANVPSLIVAIIGGSSGAGKLIII 120
           SGQSSTITGTYA QYVMQGFLDL+L PW++NFLTR LA +PSLIVA+IGGS+GAGKLIII
Sbjct: 329 SGQSSTITGTYAGQYVMQGFLDLRLEPWLRNFLTRCLAIIPSLIVALIGGSAGAGKLIII 388

Query: 121 VSMILSFELPFALISLLKFTSSKTKMGTHVNSTAV 156
            SMILSFELPFAL+ LLKFTSSKTKMG+H NS  +
Sbjct: 389 ASMILSFELPFALVPLLKFTSSKTKMGSHANSLVI 423

[Close]

BLAST of Lcy03g002310 vs. TAIR 10
Match: AT1G80830.1 (natural resistance-associated macrophage protein 1 )

HSP 1 Score: 235.7 bits (600), Expect = 3.6e-62
Identity = 124/155 (80.00%), Postives = 140/155 (90.32%), Query Frame = 0


Query: 1   MAFLINVLVISVSGAVCNSPDLNKEDQMSYSDLDLNKASFLLRNVLGKWSSKLFAIALLA 60
           +AFLINV VISVSGAVCN+P+L+ ED+ +  DLDLNKASFLLRNV+GKWSSKLFAIALLA
Sbjct: 277 VAFLINVSVISVSGAVCNAPNLSPEDRANCEDLDLNKASFLLRNVVGKWSSKLFAIALLA 336

Query: 61  SGQSSTITGTYALQYVMQGFLDLKLTPWIKNFLTRSLANVPSLIVAIIGGSSGAGKLIII 120
           SGQSSTITGTYA QYVMQGFLDL+L PW++N LTR LA +PSLIVA+IGGS+GAGKLIII
Sbjct: 337 SGQSSTITGTYAGQYVMQGFLDLRLEPWLRNLLTRCLAIIPSLIVALIGGSAGAGKLIII 396

Query: 121 VSMILSFELPFALISLLKFTSSKTKMGTHVNSTAV 156
            SMILSFELPFAL+ LLKFTS KTKMG+HVN  A+
Sbjct: 397 ASMILSFELPFALVPLLKFTSCKTKMGSHVNPMAI 431

[Close]

BLAST of Lcy03g002310 vs. TAIR 10
Match: AT4G18790.1 (NRAMP metal ion transporter family protein )

HSP 1 Score: 80.9 bits (198), Expect = 1.5e-15
Identity = 46/98 (46.94%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 53  LFAIALLASGQSSTITGTYALQYVMQGFLDLKLTPWIKNFLTRSLANVPSLIVAIIGGSS 112
           ++ I LLA+GQSSTITGTYA Q++M+GFLDL++  W+  F+TRS A VP++ VAI+  +S
Sbjct: 351 IWGIGLLAAGQSSTITGTYAGQFIMEGFLDLQMEQWLSAFITRSFAIVPTMFVAIMFNTS 410

Query: 113 GAGKLIII---VSMILSFELPFALISLLKFTSSKTKMG 148
             G L ++   ++++ S ++PFA+I LL   S++  MG
Sbjct: 411 -EGSLDVLNEWLNILQSMQIPFAVIPLLTMVSNEHIMG 447

[Close]

BLAST of Lcy03g002310 vs. TAIR 10
Match: AT1G47240.1 (NRAMP metal ion transporter 2 )

HSP 1 Score: 78.6 bits (192), Expect = 7.4e-15
Identity = 45/97 (46.39%), Postives = 69/97 (71.13%), Query Frame = 0


Query: 53  LFAIALLASGQSSTITGTYALQYVMQGFLDLKLTPWIKNFLTRSLANVPSLIVAIIGGSS 112
           ++ I LLA+GQSSTITGTYA Q++M GFL+L+L  W++  +TRS A VP++IVAI+  +S
Sbjct: 349 IWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRAVITRSCAIVPTMIVAIVFNTS 408

Query: 113 GAGKLII--IVSMILSFELPFALISLLKFTSSKTKMG 148
            A   ++   ++++ S ++PFAL+ LL   S +  MG
Sbjct: 409 EASLDVLNEWLNVLQSVQIPFALLPLLTLVSKEEIMG 445

[Close]

BLAST of Lcy03g002310 vs. TAIR 10
Match: AT2G23150.1 (natural resistance-associated macrophage protein 3 )

HSP 1 Score: 78.2 bits (191), Expect = 9.7e-15
Identity = 57/152 (37.50%), Postives = 89/152 (58.55%), Query Frame = 0


Query: 1   MAFLINVLVISVSGAVCNSPDLNKEDQMSYSDLDLNKASFLLRNVLGKWSSKLF--AIAL 60
           ++FLIN+ V +V      + DL     +      +N   +L     G     L+  AI L
Sbjct: 289 ISFLINLFVTTVFAKGFYNTDLANSIGL------VNAGQYLQEKYGGGVFPILYIWAIGL 348

Query: 61  LASGQSSTITGTYALQYVMQGFLDLKLTPWIKNFLTRSLANVPSLIVAIIGGSSGAGKLI 120
           LA+GQSSTITGTYA Q++M GFL+ K+  W++  +TRS A +P++IVA++  SS A   +
Sbjct: 349 LAAGQSSTITGTYAGQFIMGGFLNFKMKKWLRALITRSCAIIPTIIVALVFDSSEATLDV 408

Query: 121 I--IVSMILSFELPFALISLLKFTSSKTKMGT 149
           +   ++++ S ++PFALI LL   S +  MG+
Sbjct: 409 LNEWLNVLQSIQIPFALIPLLCLVSKEQIMGS 434

The following BLAST results are available for this feature:

BLAST of Lcy03g002310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S9N8	6.1e-62	81.29	Metal transporter Nramp6 OS=Arabidopsis thaliana OX=3702 GN=NRAMP6 PE=2 SV=2	[more]
Q9SAH8	5.1e-61	80.00	Metal transporter Nramp1 OS=Arabidopsis thaliana OX=3702 GN=NRAMP1 PE=1 SV=1	[more]
Q653V6	1.1e-60	79.35	Metal transporter Nramp3 OS=Oryza sativa subsp. japonica OX=39947 GN=NRAMP3 PE=2...	[more]
Q0D7E4	1.2e-49	66.03	Metal transporter Nramp1 OS=Oryza sativa subsp. japonica OX=39947 GN=NRAMP1 PE=2...	[more]
Q8H4H5	2.5e-47	63.06	Metal transporter Nramp5 OS=Oryza sativa subsp. japonica OX=39947 GN=NRAMP5 PE=2...	[more]

BLAST of Lcy03g002310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J3T2	3.8e-67	90.97	metal transporter Nramp6-like OS=Cucurbita maxima OX=3661 GN=LOC111481537 PE=3 S...	[more]
A0A6J1F4P3	3.8e-67	90.97	metal transporter Nramp6-like OS=Cucurbita moschata OX=3662 GN=LOC111442317 PE=3...	[more]
A0A5A7TXN6	6.5e-67	91.61	Metal transporter Nramp6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7T2K9	1.4e-66	90.97	Metal transporter Nramp6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5D3DUP0	1.4e-66	90.97	Metal transporter Nramp6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of Lcy03g002310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905496.1	3.5e-67	92.26	metal transporter Nramp6-like [Benincasa hispida] >XP_038905497.1 metal transpor...	[more]
XP_022935446.1	7.9e-67	90.97	metal transporter Nramp6-like [Cucurbita moschata]	[more]
KAG7018125.1	7.9e-67	90.97	Metal transporter Nramp6, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6581627.1	7.9e-67	90.97	Metal transporter Nramp1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022982780.1	7.9e-67	90.97	metal transporter Nramp6-like [Cucurbita maxima]	[more]

BLAST of Lcy03g002310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15960.1	4.3e-63	81.29	NRAMP metal ion transporter 6	[more]
AT1G80830.1	3.6e-62	80.00	natural resistance-associated macrophage protein 1	[more]
AT4G18790.1	1.5e-15	46.94	NRAMP metal ion transporter family protein	[more]
AT1G47240.1	7.4e-15	46.39	NRAMP metal ion transporter 2	[more]
AT2G23150.1	9.7e-15	37.50	natural resistance-associated macrophage protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001046	NRAMP family	PRINTS	PR00447	NATRESASSCMP	coord: 90..107 score: 42.89 coord: 62..81 score: 72.8 coord: 122..141 score: 48.4
IPR001046	NRAMP family	PFAM	PF01566	Nramp	coord: 1..152 e-value: 8.1E-38 score: 130.3
IPR001046	NRAMP family	PANTHER	PTHR11706	SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER	coord: 1..156
None	No IPR available	PANTHER	PTHR11706:SF54	METAL TRANSPORTER NRAMP6	coord: 1..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy03g002310.1	Lcy03g002310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070574	cadmium ion transmembrane transport
biological_process	GO:0071421	manganese ion transmembrane transport
biological_process	GO:0030001	metal ion transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0015086	cadmium ion transmembrane transporter activity
molecular_function	GO:0005384	manganese ion transmembrane transporter activity
molecular_function	GO:0046873	metal ion transmembrane transporter activity